Miyakogusa Predicted Gene

Lj3g3v2314120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2314120.1 NODE_68352_length_528_cov_8.621212.path1.1
         (163 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G16175.1 | Symbols:  | Thioesterase superfamily protein | chr...    90   9e-19
AT1G52191.1 | Symbols:  | Thioesterase superfamily protein | chr...    73   7e-14
AT2G29590.1 | Symbols:  | Thioesterase superfamily protein | chr...    70   4e-13
AT1G04290.1 | Symbols:  | Thioesterase superfamily protein | chr...    67   7e-12

>AT3G16175.1 | Symbols:  | Thioesterase superfamily protein |
           chr3:5480497-5481208 FORWARD LENGTH=157
          Length = 157

 Score = 89.7 bits (221), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 78/131 (59%), Gaps = 1/131 (0%)

Query: 20  WINAIANGDFGQEIETSTAKGIRVVQAHKGFLLCDFTIHSGLSDENGNWHVGAIATLVDI 79
           ++  IA G+   E E    KG+ ++   KG L C   +   +  E+G+W+ G I  ++D 
Sbjct: 12  YLEEIAKGNGQTEFEILILKGLELIHVGKGILRCKLLVTDHVVGEDGSWNAGVITAVMDS 71

Query: 80  IGSCVSLSITSSLQQVTLDFSISYYTTARLQEEVKVEAKVIGKKEELTSVIVEVRKKENG 139
           IG+    S    L  +++D + S+Y+TA++ E V++EA+V G    L S ++E+R++ +G
Sbjct: 72  IGASAVYSSGGGLH-ISVDLNSSFYSTAKIHETVEIEARVNGSNGGLKSAVIEIRRETSG 130

Query: 140 ELVALGKLWLA 150
           E++A G+LW+A
Sbjct: 131 EIIATGRLWMA 141


>AT1G52191.1 | Symbols:  | Thioesterase superfamily protein |
           chr1:19439367-19441400 REVERSE LENGTH=138
          Length = 138

 Score = 73.2 bits (178), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 77/116 (66%), Gaps = 3/116 (2%)

Query: 39  KGIRVVQAHKGFLLCDFTIHSGLSDENGNWHVGAIATLVDIIGSCVSLSITSSLQQVTLD 98
           +G++V+   +G + C  T+   + +E+G  H  AI  L++++G+    S   S   V L+
Sbjct: 7   EGLQVIHVGRGIVRCKLTVTHHVLNEDGTLHTAAIGVLMELMGAIAIYSAGGSHTSVDLN 66

Query: 99  FSISYYTTARLQEEVKVEAKVIGKK-EELTSVIVEVRKKENGELVALGKLWLAVPR 153
           +S+  Y+TA++QEE+K+EA+V+GK+ E L S I+E+R++   EL+A G+LW+++ +
Sbjct: 67  YSL--YSTAKIQEEIKIEARVVGKRSENLNSAIIEIRREYEEELIATGRLWMSLLK 120


>AT2G29590.1 | Symbols:  | Thioesterase superfamily protein |
           chr2:12654602-12655432 REVERSE LENGTH=158
          Length = 158

 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 1/113 (0%)

Query: 34  ETSTAKGIRVVQAHKGFLLCDFTIHSGLSDENGNWHVGAIATLVDIIGSCVSLSITSSLQ 93
           E  + +GIRV +   GF+ C F +   L+D + N   GAIA LVD +G  + +       
Sbjct: 36  ENFSLRGIRVNRVEPGFISCSFKVPLRLTDRDKNLANGAIANLVDEVGGAL-VHGEGLPM 94

Query: 94  QVTLDFSISYYTTARLQEEVKVEAKVIGKKEELTSVIVEVRKKENGELVALGK 146
            V++D SI++ + A+L EE+++ ++++G++      IV VR K  GE++A G+
Sbjct: 95  SVSVDMSIAFLSKAKLGEELEITSRLLGERGGYKGTIVVVRNKMTGEIIAEGR 147


>AT1G04290.1 | Symbols:  | Thioesterase superfamily protein |
           chr1:1147721-1148352 REVERSE LENGTH=155
          Length = 155

 Score = 66.6 bits (161), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 64/114 (56%)

Query: 33  IETSTAKGIRVVQAHKGFLLCDFTIHSGLSDENGNWHVGAIATLVDIIGSCVSLSITSSL 92
           +E     G++V     G ++C   I   L +     H GA ATLVD+IGS V  +  +S 
Sbjct: 31  LERFVTNGLKVDLIEPGRIVCSMKIPPHLLNAGKFLHGGATATLVDLIGSAVIYTAGASH 90

Query: 93  QQVTLDFSISYYTTARLQEEVKVEAKVIGKKEELTSVIVEVRKKENGELVALGK 146
             V+++ ++SY   A L EE+++E+K +   + +  V VE+RKK  G+++A G+
Sbjct: 91  SGVSVEINVSYLDAAFLDEEIEIESKALRVGKAVAVVSVELRKKTTGKIIAQGR 144