Miyakogusa Predicted Gene

Lj3g3v2309750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2309750.1 Non Chatacterized Hit- tr|I1LKC8|I1LKC8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6914
PE=,86.52,0,seg,NULL,CUFF.44295.1
         (1168 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G07910.2 | Symbols: ATRNL, RNL, AtRLG1 | RNAligase | chr1:244...  1588   0.0  
AT1G07910.1 | Symbols: ATRNL, RNL, AtRLG1 | RNAligase | chr1:244...  1588   0.0  

>AT1G07910.2 | Symbols: ATRNL, RNL, AtRLG1 | RNAligase |
            chr1:2446712-2454386 FORWARD LENGTH=1104
          Length = 1104

 Score = 1588 bits (4113), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 763/1118 (68%), Positives = 896/1118 (80%), Gaps = 29/1118 (2%)

Query: 65   EAPLSSTMGDSATGSETVSNKLAGMHIGENS-------EQTGLGHANKGAIWKPKSYGT- 116
            +AP  S    +   +E V+N+  G+ + E++        QT   H  +  +WKPKSYGT 
Sbjct: 2    DAPFESGDSSATVVAEAVNNQFGGLSLKESNTNAPVLPSQTTSNHRVQNLVWKPKSYGTV 61

Query: 117  ---TAATEVDNKPAGKVAVDGARVDATGVASPQKSSISSAGLSKLFQGNLLEKFEVDNST 173
               ++ATEV     GK +     V   G +   K  ++   LSK+F GNLLEKF VD ST
Sbjct: 62   SGSSSATEV-----GKTSA----VSQIGSSGDTKVGLN---LSKIFGGNLLEKFSVDKST 109

Query: 174  YSQAHIRATFYPKFENEKSDQETRTRMIEMVSKGLATLEVSLKHSGSLFMYAGHEGGAYA 233
            Y  A IRATFYPKFENEK+DQE RTRMIEMVSKGLATLEVSLKHSGSLFMYAGH+GGAYA
Sbjct: 110  YCHAQIRATFYPKFENEKTDQEIRTRMIEMVSKGLATLEVSLKHSGSLFMYAGHKGGAYA 169

Query: 234  KNSFGNIYTAVGVFVLGRMFREAWGTEASKKQAEFNNFLERNHMCISMELVTAVLGDHGQ 293
            KNSFGNIYTAVGVFVL RMFREAWGT+A KK+AEFN+FLE+N MCISMELVTAVLGDHGQ
Sbjct: 170  KNSFGNIYTAVGVFVLSRMFREAWGTKAPKKEAEFNDFLEKNRMCISMELVTAVLGDHGQ 229

Query: 294  RPQEDFVVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRKSASSFFATYDA 353
            RP +D+VVVTAVTELGNGKP+FYST EII+FCRKWRLPTNHVWLFSTRKS +SFFA +DA
Sbjct: 230  RPLDDYVVVTAVTELGNGKPQFYSTSEIISFCRKWRLPTNHVWLFSTRKSVTSFFAAFDA 289

Query: 354  LCEEGTATSVCKVLDEIADVSVPGSKDHVKAQGEILEGLVARLVSHESSNHIEKVLKEFP 413
            LCEEG ATSVC+ LDE+AD+SVP SKDHVK QGEILEGLVAR+VS +SS  +E VL++ P
Sbjct: 290  LCEEGIATSVCRALDEVADISVPASKDHVKVQGEILEGLVARIVSSQSSRDMENVLRDHP 349

Query: 414  PPPADGVALDFGPSLREICAANRSDEKQQIKALLESVGSSFCPDYSDWYGTDGADIHSRN 473
            PPP DG  LD G SLREICAA+RS+EKQQ++ALL SVG SFCP   +W+G +    H ++
Sbjct: 350  PPPCDGANLDLGLSLREICAAHRSNEKQQMRALLRSVGPSFCPSDVEWFGDES---HPKS 406

Query: 474  VDRSVVSKFLQAHPADYSTKKLQEIIRLMREKRFPAAFKCYHNFHKVDAISSDNVFYKMV 533
             D+SV++KFLQ+ PADYST KLQE++RLM+EKR PAAFKCYHNFH+ + IS DN+FYK+V
Sbjct: 407  ADKSVITKFLQSQPADYSTSKLQEMVRLMKEKRLPAAFKCYHNFHRAEDISPDNLFYKLV 466

Query: 534  IHVHSDSAFRRYQKEMRHRPGLWPLYRGFFVDINLFKANKEKAAEISMKXXXXXXXXXXX 593
            +HVHSDS FRRY KEMRH P LWPLYRGFFVDINLFK+NK +                  
Sbjct: 467  VHVHSDSGFRRYHKEMRHMPSLWPLYRGFFVDINLFKSNKGRDLMALKSIDNASENDGRG 526

Query: 594  EKDDFADEDANLMVKLKFLTYKLRTFLIRNGLPVLFKEGQSAYKAYYLRQMKIWGTSPGK 653
            EKD  AD+DANLM+K+KFLTYKLRTFLIRNGL +LFK+G +AYK YYLRQMKIWGTS GK
Sbjct: 527  EKDGLADDDANLMIKMKFLTYKLRTFLIRNGLSILFKDGAAAYKTYYLRQMKIWGTSDGK 586

Query: 654  QKELSKMLDEWAVHIRRKCGNKQLSSSIYLSEAEPFLEQFAKRSPQNQALIGSAGSLVRT 713
            QKEL KMLDEWA +IRRKCGN QLSSS YLSEAEPFLEQ+AKRSP+N  LIGSAG+LVRT
Sbjct: 587  QKELCKMLDEWAAYIRRKCGNDQLSSSTYLSEAEPFLEQYAKRSPKNHILIGSAGNLVRT 646

Query: 714  EDFLAIVEEGQDEEGDLVAERDMAPSGPSISVKDTVPKNEGLIVFFPGIPGCAKSALCKE 773
            EDFLAIV+   DEEGDLV ++ + P+ P  +VK+ V K+EGLIVFFPGIPG AKSALCKE
Sbjct: 647  EDFLAIVDGDLDEEGDLVKKQGVTPATPEPAVKEAVQKDEGLIVFFPGIPGSAKSALCKE 706

Query: 774  LLNAQGGLGDDRPVHSLMGDLIKGKYWQKVAEERRKKPNSIMLADKNAPNKEVWRQIEDM 833
            LLNA GG GDDRPVH+LMGDL+KGKYW KVA+ERRKKP SIMLADKNAPN++VWRQIEDM
Sbjct: 707  LLNAPGGFGDDRPVHTLMGDLVKGKYWPKVADERRKKPQSIMLADKNAPNEDVWRQIEDM 766

Query: 834  CLRTKASAVPVVPESEGTDSNPFSLDALAVFMFRVLQRVNHPGNLDKASPNAGYVLLMFY 893
            C RT+ASAVP+V +SEGTD+NP+SLDALAVFMFRVLQRVNHPG LDK S NAGYVLLMFY
Sbjct: 767  CRRTRASAVPIVADSEGTDTNPYSLDALAVFMFRVLQRVNHPGKLDKESSNAGYVLLMFY 826

Query: 894  DLYDGESRKEFEGELIERFGSLVKMPLLKSDRNPLPEAVQCILKEGIDLFKLHSKRHGRL 953
             LY+G++R EFE ELIERFGSL+KMPLLKSDR PLP+ V+ +L+EGIDLF LHS+RHGRL
Sbjct: 827  HLYEGKNRNEFESELIERFGSLIKMPLLKSDRTPLPDPVKSVLEEGIDLFNLHSRRHGRL 886

Query: 954  ESTKGSYAKEWIKWEKQLRDILNQTAEYFNSIQVPFDFAVKQVSEQLRNIAKGEYTAPDT 1013
            ESTKG+YA EW KWEKQLRD L   +EY +SIQVPF+  V QV E+L+ IAKG+Y  P +
Sbjct: 887  ESTKGTYAAEWTKWEKQLRDTLVANSEYLSSIQVPFESMVHQVREELKTIAKGDYKPPSS 946

Query: 1014 ETRKLGAIVFAAISVPVAEIQGVLNNLAEKNPKIDAFLKGNH---LENLNRAHLTLAHKR 1070
            E RK G+IVFAAI++P  ++  +L  LA  NP + +FL+G      E L R+H+TLAHKR
Sbjct: 947  EKRKHGSIVFAAINLPATQVHSLLEKLAAANPTMRSFLEGKKKSIQEKLERSHVTLAHKR 1006

Query: 1071 SHGIKAVADYGLWLHIKVPVELTALLLSDKMAALEACPGSVDGDKIVSKNAWPHITLWTG 1130
            SHG+  VA Y   L+ +VPVELT L+ +DKMAAL A  GSVDG+ +VSKN WPH+TLWT 
Sbjct: 1007 SHGVATVASYSQHLNREVPVELTELIYNDKMAALTAHVGSVDGETVVSKNEWPHVTLWTA 1066

Query: 1131 EGVAAKDANMLPQLFAEGKANRIDFNPPISIYGTMEFY 1168
            EGV AK+AN LPQL+ EGKA+R+  +PP+SI G +EF+
Sbjct: 1067 EGVTAKEANTLPQLYLEGKASRLVIDPPVSISGPLEFF 1104


>AT1G07910.1 | Symbols: ATRNL, RNL, AtRLG1 | RNAligase |
            chr1:2446712-2454386 FORWARD LENGTH=1104
          Length = 1104

 Score = 1588 bits (4113), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 763/1118 (68%), Positives = 896/1118 (80%), Gaps = 29/1118 (2%)

Query: 65   EAPLSSTMGDSATGSETVSNKLAGMHIGENS-------EQTGLGHANKGAIWKPKSYGT- 116
            +AP  S    +   +E V+N+  G+ + E++        QT   H  +  +WKPKSYGT 
Sbjct: 2    DAPFESGDSSATVVAEAVNNQFGGLSLKESNTNAPVLPSQTTSNHRVQNLVWKPKSYGTV 61

Query: 117  ---TAATEVDNKPAGKVAVDGARVDATGVASPQKSSISSAGLSKLFQGNLLEKFEVDNST 173
               ++ATEV     GK +     V   G +   K  ++   LSK+F GNLLEKF VD ST
Sbjct: 62   SGSSSATEV-----GKTSA----VSQIGSSGDTKVGLN---LSKIFGGNLLEKFSVDKST 109

Query: 174  YSQAHIRATFYPKFENEKSDQETRTRMIEMVSKGLATLEVSLKHSGSLFMYAGHEGGAYA 233
            Y  A IRATFYPKFENEK+DQE RTRMIEMVSKGLATLEVSLKHSGSLFMYAGH+GGAYA
Sbjct: 110  YCHAQIRATFYPKFENEKTDQEIRTRMIEMVSKGLATLEVSLKHSGSLFMYAGHKGGAYA 169

Query: 234  KNSFGNIYTAVGVFVLGRMFREAWGTEASKKQAEFNNFLERNHMCISMELVTAVLGDHGQ 293
            KNSFGNIYTAVGVFVL RMFREAWGT+A KK+AEFN+FLE+N MCISMELVTAVLGDHGQ
Sbjct: 170  KNSFGNIYTAVGVFVLSRMFREAWGTKAPKKEAEFNDFLEKNRMCISMELVTAVLGDHGQ 229

Query: 294  RPQEDFVVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRKSASSFFATYDA 353
            RP +D+VVVTAVTELGNGKP+FYST EII+FCRKWRLPTNHVWLFSTRKS +SFFA +DA
Sbjct: 230  RPLDDYVVVTAVTELGNGKPQFYSTSEIISFCRKWRLPTNHVWLFSTRKSVTSFFAAFDA 289

Query: 354  LCEEGTATSVCKVLDEIADVSVPGSKDHVKAQGEILEGLVARLVSHESSNHIEKVLKEFP 413
            LCEEG ATSVC+ LDE+AD+SVP SKDHVK QGEILEGLVAR+VS +SS  +E VL++ P
Sbjct: 290  LCEEGIATSVCRALDEVADISVPASKDHVKVQGEILEGLVARIVSSQSSRDMENVLRDHP 349

Query: 414  PPPADGVALDFGPSLREICAANRSDEKQQIKALLESVGSSFCPDYSDWYGTDGADIHSRN 473
            PPP DG  LD G SLREICAA+RS+EKQQ++ALL SVG SFCP   +W+G +    H ++
Sbjct: 350  PPPCDGANLDLGLSLREICAAHRSNEKQQMRALLRSVGPSFCPSDVEWFGDES---HPKS 406

Query: 474  VDRSVVSKFLQAHPADYSTKKLQEIIRLMREKRFPAAFKCYHNFHKVDAISSDNVFYKMV 533
             D+SV++KFLQ+ PADYST KLQE++RLM+EKR PAAFKCYHNFH+ + IS DN+FYK+V
Sbjct: 407  ADKSVITKFLQSQPADYSTSKLQEMVRLMKEKRLPAAFKCYHNFHRAEDISPDNLFYKLV 466

Query: 534  IHVHSDSAFRRYQKEMRHRPGLWPLYRGFFVDINLFKANKEKAAEISMKXXXXXXXXXXX 593
            +HVHSDS FRRY KEMRH P LWPLYRGFFVDINLFK+NK +                  
Sbjct: 467  VHVHSDSGFRRYHKEMRHMPSLWPLYRGFFVDINLFKSNKGRDLMALKSIDNASENDGRG 526

Query: 594  EKDDFADEDANLMVKLKFLTYKLRTFLIRNGLPVLFKEGQSAYKAYYLRQMKIWGTSPGK 653
            EKD  AD+DANLM+K+KFLTYKLRTFLIRNGL +LFK+G +AYK YYLRQMKIWGTS GK
Sbjct: 527  EKDGLADDDANLMIKMKFLTYKLRTFLIRNGLSILFKDGAAAYKTYYLRQMKIWGTSDGK 586

Query: 654  QKELSKMLDEWAVHIRRKCGNKQLSSSIYLSEAEPFLEQFAKRSPQNQALIGSAGSLVRT 713
            QKEL KMLDEWA +IRRKCGN QLSSS YLSEAEPFLEQ+AKRSP+N  LIGSAG+LVRT
Sbjct: 587  QKELCKMLDEWAAYIRRKCGNDQLSSSTYLSEAEPFLEQYAKRSPKNHILIGSAGNLVRT 646

Query: 714  EDFLAIVEEGQDEEGDLVAERDMAPSGPSISVKDTVPKNEGLIVFFPGIPGCAKSALCKE 773
            EDFLAIV+   DEEGDLV ++ + P+ P  +VK+ V K+EGLIVFFPGIPG AKSALCKE
Sbjct: 647  EDFLAIVDGDLDEEGDLVKKQGVTPATPEPAVKEAVQKDEGLIVFFPGIPGSAKSALCKE 706

Query: 774  LLNAQGGLGDDRPVHSLMGDLIKGKYWQKVAEERRKKPNSIMLADKNAPNKEVWRQIEDM 833
            LLNA GG GDDRPVH+LMGDL+KGKYW KVA+ERRKKP SIMLADKNAPN++VWRQIEDM
Sbjct: 707  LLNAPGGFGDDRPVHTLMGDLVKGKYWPKVADERRKKPQSIMLADKNAPNEDVWRQIEDM 766

Query: 834  CLRTKASAVPVVPESEGTDSNPFSLDALAVFMFRVLQRVNHPGNLDKASPNAGYVLLMFY 893
            C RT+ASAVP+V +SEGTD+NP+SLDALAVFMFRVLQRVNHPG LDK S NAGYVLLMFY
Sbjct: 767  CRRTRASAVPIVADSEGTDTNPYSLDALAVFMFRVLQRVNHPGKLDKESSNAGYVLLMFY 826

Query: 894  DLYDGESRKEFEGELIERFGSLVKMPLLKSDRNPLPEAVQCILKEGIDLFKLHSKRHGRL 953
             LY+G++R EFE ELIERFGSL+KMPLLKSDR PLP+ V+ +L+EGIDLF LHS+RHGRL
Sbjct: 827  HLYEGKNRNEFESELIERFGSLIKMPLLKSDRTPLPDPVKSVLEEGIDLFNLHSRRHGRL 886

Query: 954  ESTKGSYAKEWIKWEKQLRDILNQTAEYFNSIQVPFDFAVKQVSEQLRNIAKGEYTAPDT 1013
            ESTKG+YA EW KWEKQLRD L   +EY +SIQVPF+  V QV E+L+ IAKG+Y  P +
Sbjct: 887  ESTKGTYAAEWTKWEKQLRDTLVANSEYLSSIQVPFESMVHQVREELKTIAKGDYKPPSS 946

Query: 1014 ETRKLGAIVFAAISVPVAEIQGVLNNLAEKNPKIDAFLKGNH---LENLNRAHLTLAHKR 1070
            E RK G+IVFAAI++P  ++  +L  LA  NP + +FL+G      E L R+H+TLAHKR
Sbjct: 947  EKRKHGSIVFAAINLPATQVHSLLEKLAAANPTMRSFLEGKKKSIQEKLERSHVTLAHKR 1006

Query: 1071 SHGIKAVADYGLWLHIKVPVELTALLLSDKMAALEACPGSVDGDKIVSKNAWPHITLWTG 1130
            SHG+  VA Y   L+ +VPVELT L+ +DKMAAL A  GSVDG+ +VSKN WPH+TLWT 
Sbjct: 1007 SHGVATVASYSQHLNREVPVELTELIYNDKMAALTAHVGSVDGETVVSKNEWPHVTLWTA 1066

Query: 1131 EGVAAKDANMLPQLFAEGKANRIDFNPPISIYGTMEFY 1168
            EGV AK+AN LPQL+ EGKA+R+  +PP+SI G +EF+
Sbjct: 1067 EGVTAKEANTLPQLYLEGKASRLVIDPPVSISGPLEFF 1104