Miyakogusa Predicted Gene

Lj3g3v2235780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2235780.1 Non Chatacterized Hit- tr|I1KVB3|I1KVB3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.93,0,CRYPTOCHROME,NULL; seg,NULL; Cryptochrome/photolyase,
N-terminal domain,DNA photolyase, N-terminal; ,CUFF.43695.1
         (276 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G15620.2 | Symbols: UVR3 | DNA photolyase family protein | ch...   306   8e-84
AT3G15620.1 | Symbols: UVR3 | DNA photolyase family protein | ch...   306   8e-84
AT1G04400.1 | Symbols: CRY2, FHA, AT-PHH1, PHH1, ATCRY2 | crypto...    59   4e-09
AT1G04400.2 | Symbols: CRY2, FHA, AT-PHH1, PHH1, ATCRY2 | crypto...    59   4e-09
AT2G47590.1 | Symbols: PHR2 | photolyase/blue-light receptor 2 |...    57   1e-08

>AT3G15620.2 | Symbols: UVR3 | DNA photolyase family protein |
           chr3:5294201-5296548 REVERSE LENGTH=445
          Length = 445

 Score =  306 bits (785), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 144/239 (60%), Positives = 183/239 (76%), Gaps = 3/239 (1%)

Query: 14  TPTASGSGSVVWFRKGLRIHDNPALEFASRGASNLYPVFVIDPHYMKPDPYASSPGSSRA 73
           T  A+GSGS++WFRKGLR+HDNPALE+AS+G+  +YPVFVIDPHYM+ DP A SPGSSRA
Sbjct: 18  TSMATGSGSLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHYMESDPSAFSPGSSRA 77

Query: 74  GLNRINFXXXXXXXXXXXXKKLGSRLLILKGDPAEVLIQCLKQWNVKKLCFEYDTEPYYQ 133
           G+NRI F            KKLGSRLL+ KG+P EVL++CL++W VK+LCFEYDT+PYYQ
Sbjct: 78  GVNRIRFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYDTDPYYQ 137

Query: 134 ALDIKVKSFAVAAGIEVFSPVSHTLFNPMDIIQKNGGKPPLSYQSFVKLAGDXXXXXXXX 193
           ALD+KVK +A + G+EVFSPVSHTLFNP  II+KNGGKPPLSYQSF+K+AG+        
Sbjct: 138 ALDVKVKDYASSTGVEVFSPVSHTLFNPAHIIEKNGGKPPLSYQSFLKVAGEPSCAKSEL 197

Query: 194 XXXXXX---VGHLGGCDIFEVPTVEDLGYEDAKQDEFSPFKGGESEALKRLEECMKDKV 249
                    +G +G   I EVP++E+LGY+D +Q +++PF+GGESEALKRL + + DK 
Sbjct: 198 VMSYSSLPPIGDIGNLGISEVPSLEELGYKDDEQADWTPFRGGESEALKRLTKSISDKA 256


>AT3G15620.1 | Symbols: UVR3 | DNA photolyase family protein |
           chr3:5293475-5296548 REVERSE LENGTH=556
          Length = 556

 Score =  306 bits (785), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 144/239 (60%), Positives = 183/239 (76%), Gaps = 3/239 (1%)

Query: 14  TPTASGSGSVVWFRKGLRIHDNPALEFASRGASNLYPVFVIDPHYMKPDPYASSPGSSRA 73
           T  A+GSGS++WFRKGLR+HDNPALE+AS+G+  +YPVFVIDPHYM+ DP A SPGSSRA
Sbjct: 18  TSMATGSGSLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHYMESDPSAFSPGSSRA 77

Query: 74  GLNRINFXXXXXXXXXXXXKKLGSRLLILKGDPAEVLIQCLKQWNVKKLCFEYDTEPYYQ 133
           G+NRI F            KKLGSRLL+ KG+P EVL++CL++W VK+LCFEYDT+PYYQ
Sbjct: 78  GVNRIRFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYDTDPYYQ 137

Query: 134 ALDIKVKSFAVAAGIEVFSPVSHTLFNPMDIIQKNGGKPPLSYQSFVKLAGDXXXXXXXX 193
           ALD+KVK +A + G+EVFSPVSHTLFNP  II+KNGGKPPLSYQSF+K+AG+        
Sbjct: 138 ALDVKVKDYASSTGVEVFSPVSHTLFNPAHIIEKNGGKPPLSYQSFLKVAGEPSCAKSEL 197

Query: 194 XXXXXX---VGHLGGCDIFEVPTVEDLGYEDAKQDEFSPFKGGESEALKRLEECMKDKV 249
                    +G +G   I EVP++E+LGY+D +Q +++PF+GGESEALKRL + + DK 
Sbjct: 198 VMSYSSLPPIGDIGNLGISEVPSLEELGYKDDEQADWTPFRGGESEALKRLTKSISDKA 256


>AT1G04400.1 | Symbols: CRY2, FHA, AT-PHH1, PHH1, ATCRY2 |
           cryptochrome 2 | chr1:1185719-1187901 REVERSE LENGTH=612
          Length = 612

 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 12/204 (5%)

Query: 22  SVVWFRKGLRIHDNPALEFASRGASNLYPVFVIDPHYMKPDPYASSPGSSRAGLNRINFX 81
           ++VWFR+ LRI DNPAL  A+   S ++PVF+  P            G    G     + 
Sbjct: 7   TIVWFRRDLRIEDNPALAAAAHEGS-VFPVFIWCPE---------EEGQFYPGRASRWWM 56

Query: 82  XXXXXXXXXXXKKLGSRLLILKG-DPAEVLIQCLKQWNVKKLCFEYDTEPYYQALDIKVK 140
                      K LGS L ++K  +    ++ C++     K+ F +  +P     D  VK
Sbjct: 57  KQSLAHLSQSLKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVK 116

Query: 141 SFAVAAGIEVFSPVSHTLFNPMDIIQKNGGKPPLSYQSFVKLAGDXXXXXXXXXXXXXXV 200
              V  GI V S     L+ P +I  +  GKP  S+ S+ K   D              +
Sbjct: 117 EKLVERGISVQSYNGDLLYEPWEIYCEK-GKPFTSFNSYWKKCLDMSIESVMLPPPWRLM 175

Query: 201 GHLGGCDIFEVPTVEDLGYEDAKQ 224
                 +     ++E+LG E+  +
Sbjct: 176 PITAAAEAIWACSIEELGLENEAE 199


>AT1G04400.2 | Symbols: CRY2, FHA, AT-PHH1, PHH1, ATCRY2 |
           cryptochrome 2 | chr1:1185719-1187901 REVERSE LENGTH=612
          Length = 612

 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 12/204 (5%)

Query: 22  SVVWFRKGLRIHDNPALEFASRGASNLYPVFVIDPHYMKPDPYASSPGSSRAGLNRINFX 81
           ++VWFR+ LRI DNPAL  A+   S ++PVF+  P            G    G     + 
Sbjct: 7   TIVWFRRDLRIEDNPALAAAAHEGS-VFPVFIWCPE---------EEGQFYPGRASRWWM 56

Query: 82  XXXXXXXXXXXKKLGSRLLILKG-DPAEVLIQCLKQWNVKKLCFEYDTEPYYQALDIKVK 140
                      K LGS L ++K  +    ++ C++     K+ F +  +P     D  VK
Sbjct: 57  KQSLAHLSQSLKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVK 116

Query: 141 SFAVAAGIEVFSPVSHTLFNPMDIIQKNGGKPPLSYQSFVKLAGDXXXXXXXXXXXXXXV 200
              V  GI V S     L+ P +I  +  GKP  S+ S+ K   D              +
Sbjct: 117 EKLVERGISVQSYNGDLLYEPWEIYCEK-GKPFTSFNSYWKKCLDMSIESVMLPPPWRLM 175

Query: 201 GHLGGCDIFEVPTVEDLGYEDAKQ 224
                 +     ++E+LG E+  +
Sbjct: 176 PITAAAEAIWACSIEELGLENEAE 199


>AT2G47590.1 | Symbols: PHR2 | photolyase/blue-light receptor 2 |
           chr2:19521888-19523732 FORWARD LENGTH=447
          Length = 447

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 91/227 (40%), Gaps = 9/227 (3%)

Query: 25  WFRKGLRIHDNPALEFASRGASNLYPVFVIDPHYMKPDPYASSPGSSRAGLNRINFXXXX 84
           WFR  LR+HDN  L  A+    ++ PV+  DP     D   SS G  + G  R  F    
Sbjct: 120 WFRNDLRVHDNECLNSANDECVSVLPVYCFDPR----DYGKSSSGFDKTGPFRAQFLIES 175

Query: 85  XXXXXXXXKKLGSRLLILKGDPAEVLIQCLKQWNVKKLCFEYDTEPYYQALDIKVKSFAV 144
                   +  GS L++  G P  VL++  K+     +    +        + K+++   
Sbjct: 176 VSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAEGKIETAMK 235

Query: 145 AAGIEVFSPVSHTLFNPMDIIQKNGGKPPLSYQSFV-KLAGDXXXXXXXXXXXXXXVGHL 203
             G+EV      TL++ +D +       P +Y +F  K+                 +   
Sbjct: 236 EEGVEVKYFWGSTLYH-LDDLPFKIEDLPSNYGAFKDKVQKLEIRKTIAALDQLKSLPSR 294

Query: 204 GGCDIFEVPTVEDLGYE---DAKQDEFSPFKGGESEALKRLEECMKD 247
           G  ++ ++P++ DLG        Q+      GGE+EAL RL+    D
Sbjct: 295 GDVELGDIPSLLDLGISPTPRTSQEGKPTMVGGETEALTRLKSFAAD 341