Miyakogusa Predicted Gene

Lj3g3v2225730.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2225730.1 Non Chatacterized Hit- tr|I1PXJ7|I1PXJ7_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,45.61,4e-19,coiled-coil,NULL; LATE EMBRYOGENESIS ABUNDANT
PROTEIN, PUTATIVE / LEA PROTEIN, PUTATIVE,NULL; LATE E,CUFF.43689.1
         (164 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G52690.2 | Symbols:  | Late embryogenesis abundant protein (L...    77   6e-15
AT1G52690.1 | Symbols:  | Late embryogenesis abundant protein (L...    77   6e-15
AT3G15670.1 | Symbols:  | Late embryogenesis abundant protein (L...    68   2e-12
AT4G13560.1 | Symbols: UNE15 | Late embryogenesis abundant prote...    47   7e-06

>AT1G52690.2 | Symbols:  | Late embryogenesis abundant protein (LEA)
           family protein | chr1:19619842-19620589 FORWARD
           LENGTH=169
          Length = 169

 Score = 76.6 bits (187), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 72/151 (47%), Gaps = 1/151 (0%)

Query: 1   MASH-DQSYRAGETMGRTEEKGNQMMGNIGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 59
           MASH +QSY+AGET G+ +EK  + MG +G+                             
Sbjct: 1   MASHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

Query: 60  XXXXXXXXXXXXXXXXXHSTGDRTQQTAQAGKQRASEMGQATRESAQAGNDNTGGFMQQT 119
                              TG    +T +A K +A +  + T+E+A+AG + T G + QT
Sbjct: 61  KTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQT 120

Query: 120 GEKVKDMAQGATEAVKSTLGMGQKDETKEHV 150
           GE+VK MA GAT+AVK TLG+   +  KEHV
Sbjct: 121 GEQVKQMAMGATDAVKHTLGLRTDEGNKEHV 151


>AT1G52690.1 | Symbols:  | Late embryogenesis abundant protein (LEA)
           family protein | chr1:19619842-19620589 FORWARD
           LENGTH=169
          Length = 169

 Score = 76.6 bits (187), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 72/151 (47%), Gaps = 1/151 (0%)

Query: 1   MASH-DQSYRAGETMGRTEEKGNQMMGNIGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 59
           MASH +QSY+AGET G+ +EK  + MG +G+                             
Sbjct: 1   MASHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

Query: 60  XXXXXXXXXXXXXXXXXHSTGDRTQQTAQAGKQRASEMGQATRESAQAGNDNTGGFMQQT 119
                              TG    +T +A K +A +  + T+E+A+AG + T G + QT
Sbjct: 61  KTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQT 120

Query: 120 GEKVKDMAQGATEAVKSTLGMGQKDETKEHV 150
           GE+VK MA GAT+AVK TLG+   +  KEHV
Sbjct: 121 GEQVKQMAMGATDAVKHTLGLRTDEGNKEHV 151


>AT3G15670.1 | Symbols:  | Late embryogenesis abundant protein (LEA)
           family protein | chr3:5310141-5310901 REVERSE LENGTH=225
          Length = 225

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 74/201 (36%), Gaps = 51/201 (25%)

Query: 1   MASHDQSYRAGETMGRTEEKGNQMMGNIGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAS+ QSY+AGET G+ +EK  Q MG + +                              
Sbjct: 1   MASNQQSYKAGETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDK 60

Query: 61  XXXXXXXXXXXXXXXXHSTGDRTQQTAQAGKQRASEMGQA-------------------- 100
                            S  ++T QTAQ  +Q+A E  QA                    
Sbjct: 61  TSQTAQAAQQKAHETAQSAKEKTSQTAQTAQQKAHETTQAAKEKTSQAGDKAREAKDKAG 120

Query: 101 -------------------------------TRESAQAGNDNTGGFMQQTGEKVKDMAQG 129
                                          T+E+A+AG D TGGF+ QTGE VK MA G
Sbjct: 121 SYLSETGEAIKNKAQDAAQYTKETAQGAAQYTKETAEAGRDKTGGFLSQTGEHVKQMAMG 180

Query: 130 ATEAVKSTLGMGQKDETKEHV 150
           A +AVK T GM  ++E KEH 
Sbjct: 181 AADAVKHTFGMATEEEDKEHY 201


>AT4G13560.1 | Symbols: UNE15 | Late embryogenesis abundant protein
           (LEA) family protein | chr4:7879764-7880311 REVERSE
           LENGTH=109
          Length = 109

 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 11/77 (14%)

Query: 78  STGDRTQQTAQAGKQRASEMGQATRE-----------SAQAGNDNTGGFMQQTGEKVKDM 126
           S  D+T    Q+ + +A+++ Q+ R+           SAQ   +   G   QTGE VK+M
Sbjct: 32  SACDKTADLTQSARDKAADLTQSARDKTADGSHSANKSAQHNQEQAAGLFGQTGESVKNM 91

Query: 127 AQGATEAVKSTLGMGQK 143
           AQGA + VK++LGM +K
Sbjct: 92  AQGALDGVKNSLGMNEK 108