Miyakogusa Predicted Gene

Lj3g3v2188190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2188190.1 Non Chatacterized Hit- tr|I1KMK9|I1KMK9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,68,0.000000000004, ,CUFF.43656.1
         (62 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G23330.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    48   1e-06

>AT3G23330.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:8347200-8349347 FORWARD
           LENGTH=715
          Length = 715

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 34/50 (68%)

Query: 1   MTPNSVTLSSMLPVLGEFGFFKSGMEVRAFTLRMGIEFDIFIANSMIDIF 50
           + P+S TLSS+LP+  E+     G E+  + +R GI+ D++I +S++D++
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMY 287