Miyakogusa Predicted Gene
- Lj3g3v2188150.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2188150.1 Non Chatacterized Hit- tr|D7SZP3|D7SZP3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.18,2e-17,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; no description,Tetratricopeptide-like hel,CUFF.43655.1
(290 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G20190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 4e-36
AT1G80130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 4e-31
AT4G32340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 2e-29
AT4G17940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 2e-28
AT2G29670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT1G04530.1 | Symbols: TPR4 | Tetratricopeptide repeat (TPR)-lik... 87 2e-17
AT1G07280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT1G07280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT1G07280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT3G47080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
>AT5G20190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6814093-6815171 FORWARD
LENGTH=290
Length = 290
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 79/99 (79%)
Query: 153 TDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLYADL 212
TD +Y+ MIEANP + + L NYAKFLKEVR+DY KAEEY RAIL SP DG+ L++YA+L
Sbjct: 156 TDVHYRKMIEANPGNGIFLSNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAEL 215
Query: 213 IWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDA 251
+W+ K++ RAE YFNQAV +APED YV ASYA FLWDA
Sbjct: 216 VWKIHKDSSRAENYFNQAVAAAPEDCYVQASYARFLWDA 254
>AT1G80130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30141250-30142478 REVERSE
LENGTH=305
Length = 305
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 97/143 (67%), Gaps = 3/143 (2%)
Query: 151 DKTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLYA 210
D TD YY+ MI++NP ++LL GNYAKFLKEV+ D KAEEY ERAIL + DG+ LSLYA
Sbjct: 163 DATDTYYREMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVLSLYA 222
Query: 211 DLIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDAEDEEDKDSQNELDHS---R 267
DLI ++ RA Y+ QAV+ +PED YV ASYA FLWD +++E+ ++ E + +
Sbjct: 223 DLILHNHQDRQRAHSYYKQAVKMSPEDCYVQASYARFLWDVDEDEEDEALGEEEENLSDE 282
Query: 268 NAYPNPTDLFQENNHHPHLTAAS 290
+ PT +F++ H +TA+S
Sbjct: 283 TGHVPPTTMFRDFPQHTSITASS 305
>AT4G32340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15612741-15614219 REVERSE
LENGTH=238
Length = 238
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 73/100 (73%), Gaps = 1/100 (1%)
Query: 153 TDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPG-DGHTLSLYAD 211
D YY+ MI+ P D LLL NYA+FLKEV+ D KAEEY ERA+L+ G DG LS+Y D
Sbjct: 110 VDGYYEEMIQRYPGDTLLLSNYARFLKEVKGDGRKAEEYCERAMLSESGRDGELLSMYGD 169
Query: 212 LIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDA 251
LIW+ + RA+ Y++QAVQS+P+D VLASYA FLWDA
Sbjct: 170 LIWKNHGDGVRAQSYYDQAVQSSPDDCNVLASYARFLWDA 209
>AT4G17940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9965787-9966778 FORWARD
LENGTH=274
Length = 274
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 73/102 (71%)
Query: 150 RDKTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLY 209
+ K YY+ M+ +NP+++LLL NY KFL EV +D AEEY RAIL +PGDG LS+Y
Sbjct: 147 KSKIGDYYREMLRSNPNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMY 206
Query: 210 ADLIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDA 251
LIW+T+++ RA+ YF+QAV ++P D VL SYA F+W+A
Sbjct: 207 GRLIWETKRDEKRAQGYFDQAVNASPNDCMVLGSYARFMWEA 248
>AT2G29670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12682309-12684745 REVERSE
LENGTH=536
Length = 536
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 61/102 (59%)
Query: 149 GRDKTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLSL 208
G KT+ YQ + P++ LLL NYA+FL V D+ +AEEY +RA+ P D S
Sbjct: 416 GYFKTELMYQTELSQEPNNPLLLANYAQFLYLVSNDHDRAEEYFKRAVGVEPKDAEAFSK 475
Query: 209 YADLIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWD 250
YA +W+ + AE+ F +A+ + P +SY A+YANFLW+
Sbjct: 476 YATFLWRARDDLWAAEETFLEAIDADPTNSYYAANYANFLWN 517
>AT1G04530.1 | Symbols: TPR4 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1234456-1235895 REVERSE
LENGTH=310
Length = 310
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 156 YYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLYADLIWQ 215
YY+ M+E P LLL NYAKFL E + D + AEEY + + P DG L+ Y L+ +
Sbjct: 124 YYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPSDGVALANYGRLVMK 182
Query: 216 TEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWD 250
++ +A YF +AVQ++P+DS VLA+YA+FLW+
Sbjct: 183 LHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWE 217
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 20/122 (16%)
Query: 152 KTDAYYQNMIEANPDDALLLGNYAKFLKEVR-------------------RDYTKAEEYL 192
K +Y++ ++A+PDD+++L YA FL E+ +D +A+
Sbjct: 189 KAMSYFERAVQASPDDSIVLAAYASFLWEINADDDDEDDDEDDDESSGQGKDEFEADAAG 248
Query: 193 E-RAILASPGDGHTLSLYADLIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDA 251
+ ++ L+ DG TL YA W + ++A YF +AV+++P DS +L YA FLW+
Sbjct: 249 KGKSSLSKTEDGETLCRYAKAFWSINNDHEKALFYFEKAVEASPNDSIILGEYARFLWEI 308
Query: 252 ED 253
++
Sbjct: 309 DE 310
>AT1G07280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2238505-2240991 FORWARD
LENGTH=552
Length = 552
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 62/104 (59%)
Query: 152 KTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLYAD 211
KT+ YQ + P + LLL NYA+FL + DY +AE+Y +RA A P D L+ YA
Sbjct: 434 KTELLYQTGLSQEPGNVLLLANYAQFLYLIIHDYDRAEKYFKRAAKAEPADAEALNKYAT 493
Query: 212 LIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDAEDEE 255
+W+ + RAE+ + +A+ + P +S A+YA+FLW+ +E
Sbjct: 494 FLWRARNDIWRAEETYLEAISADPTNSVYSANYAHFLWNTGGDE 537
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 175 AKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLYADLIWQTEKNADRAEQYFNQAVQSA 234
A+ E DY K E + + PG+ L+ YA ++ + DRAE+YF +A ++
Sbjct: 422 ARLEAEESMDYFKTELLYQTGLSQEPGNVLLLANYAQFLYLIIHDYDRAEKYFKRAAKAE 481
Query: 235 PEDSYVLASYANFLWDAEDE 254
P D+ L YA FLW A ++
Sbjct: 482 PADAEALNKYATFLWRARND 501
>AT1G07280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2238505-2240991 FORWARD
LENGTH=552
Length = 552
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 62/104 (59%)
Query: 152 KTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLYAD 211
KT+ YQ + P + LLL NYA+FL + DY +AE+Y +RA A P D L+ YA
Sbjct: 434 KTELLYQTGLSQEPGNVLLLANYAQFLYLIIHDYDRAEKYFKRAAKAEPADAEALNKYAT 493
Query: 212 LIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDAEDEE 255
+W+ + RAE+ + +A+ + P +S A+YA+FLW+ +E
Sbjct: 494 FLWRARNDIWRAEETYLEAISADPTNSVYSANYAHFLWNTGGDE 537
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 175 AKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLYADLIWQTEKNADRAEQYFNQAVQSA 234
A+ E DY K E + + PG+ L+ YA ++ + DRAE+YF +A ++
Sbjct: 422 ARLEAEESMDYFKTELLYQTGLSQEPGNVLLLANYAQFLYLIIHDYDRAEKYFKRAAKAE 481
Query: 235 PEDSYVLASYANFLWDAEDE 254
P D+ L YA FLW A ++
Sbjct: 482 PADAEALNKYATFLWRARND 501
>AT1G07280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2238505-2240991 FORWARD
LENGTH=552
Length = 552
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 62/104 (59%)
Query: 152 KTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLYAD 211
KT+ YQ + P + LLL NYA+FL + DY +AE+Y +RA A P D L+ YA
Sbjct: 434 KTELLYQTGLSQEPGNVLLLANYAQFLYLIIHDYDRAEKYFKRAAKAEPADAEALNKYAT 493
Query: 212 LIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDAEDEE 255
+W+ + RAE+ + +A+ + P +S A+YA+FLW+ +E
Sbjct: 494 FLWRARNDIWRAEETYLEAISADPTNSVYSANYAHFLWNTGGDE 537
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 175 AKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLYADLIWQTEKNADRAEQYFNQAVQSA 234
A+ E DY K E + + PG+ L+ YA ++ + DRAE+YF +A ++
Sbjct: 422 ARLEAEESMDYFKTELLYQTGLSQEPGNVLLLANYAQFLYLIIHDYDRAEKYFKRAAKAE 481
Query: 235 PEDSYVLASYANFLWDAEDE 254
P D+ L YA FLW A ++
Sbjct: 482 PADAEALNKYATFLWRARND 501
>AT3G47080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17338415-17340129 REVERSE
LENGTH=515
Length = 515
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%)
Query: 152 KTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLYAD 211
+T+ Y+ + PD+ LLL NYA+FL V +D+ +AE ++AI + D T S YA
Sbjct: 399 RTELLYKIGLAQEPDNHLLLANYAQFLYLVTQDHERAENCFKKAIESEDVDAETYSKYAI 458
Query: 212 LIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDAEDEE 255
+W+ + AE+ F +A+ + P +S+ A+YANFLW+ EE
Sbjct: 459 FLWKVRNDLWAAEENFLEAISADPTNSFYAANYANFLWNTGGEE 502