Miyakogusa Predicted Gene

Lj3g3v2187050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2187050.1 tr|B9MWP3|B9MWP3_POPTR Histidine phosphotransfer
protein OS=Populus trichocarpa GN=POPTRDRAFT_592711,86.52,0,seg,NULL;
Histidine-containing phosphotransfer domain, HPT domain,Signal
transduction histidine kina,CUFF.43642.1
         (146 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G80100.1 | Symbols: AHP6, HP6 | histidine phosphotransfer pro...   190   3e-49
AT1G80100.2 | Symbols: AHP6, HP6 | histidine phosphotransfer pro...   162   9e-41
AT3G21510.1 | Symbols: AHP1 | histidine-containing phosphotransm...   109   7e-25
AT5G39340.1 | Symbols: AHP3, ATHP2 | histidine-containing phosph...   104   2e-23
AT1G03430.1 | Symbols: AHP5 | histidine-containing phosphotransf...   103   6e-23
AT3G29350.1 | Symbols: AHP2 | histidine-containing phosphotransm...    99   7e-22
AT3G16360.2 | Symbols: AHP4 | HPT phosphotransmitter 4 | chr3:55...    87   4e-18
AT3G16360.1 | Symbols: AHP4 | HPT phosphotransmitter 4 | chr3:55...    80   4e-16
AT3G29350.2 | Symbols: AHP2 | histidine-containing phosphotransm...    70   7e-13

>AT1G80100.1 | Symbols: AHP6, HP6 | histidine phosphotransfer
           protein 6 | chr1:30133818-30134652 FORWARD LENGTH=154
          Length = 154

 Score =  190 bits (482), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 100/142 (70%), Positives = 116/142 (81%)

Query: 1   MNRLLAFLFHQGVXXXXXXXXXXXXXXSSPNFVSEVVNIYFHESEKLLRNLRALLMEREF 60
           +NRLLA LFHQGV              +SPNFV +V+NIYF ESEKLLRNLR LLM+REF
Sbjct: 13  INRLLASLFHQGVLDEQFLQLQQLQDETSPNFVYDVINIYFDESEKLLRNLRLLLMDREF 72

Query: 61  SDYKKMGIHLNQFMGSSSSIGAKRVTNVCVAFRAASEQNNRTGCLRALEMLEHEYCYLKN 120
           SDYKK+G+HLNQ +GSSSSIGA+RV NVCVAFR+ASE +NR GCLR LE++EHEY YLKN
Sbjct: 73  SDYKKIGLHLNQLVGSSSSIGARRVRNVCVAFRSASELSNRPGCLRGLEVVEHEYHYLKN 132

Query: 121 KLHELFQIEQQRALAAGVRYPV 142
            +HELFQ+EQQR LAAGVRYP+
Sbjct: 133 MMHELFQLEQQRILAAGVRYPM 154


>AT1G80100.2 | Symbols: AHP6, HP6 | histidine phosphotransfer
           protein 6 | chr1:30133818-30134652 FORWARD LENGTH=132
          Length = 132

 Score =  162 bits (409), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 83/142 (58%), Positives = 97/142 (68%), Gaps = 22/142 (15%)

Query: 1   MNRLLAFLFHQGVXXXXXXXXXXXXXXSSPNFVSEVVNIYFHESEKLLRNLRALLMEREF 60
           +NRLLA LFHQGV              +SPNFV                      M+REF
Sbjct: 13  INRLLASLFHQGVLDEQFLQLQQLQDETSPNFV----------------------MDREF 50

Query: 61  SDYKKMGIHLNQFMGSSSSIGAKRVTNVCVAFRAASEQNNRTGCLRALEMLEHEYCYLKN 120
           SDYKK+G+HLNQ +GSSSSIGA+RV NVCVAFR+ASE +NR GCLR LE++EHEY YLKN
Sbjct: 51  SDYKKIGLHLNQLVGSSSSIGARRVRNVCVAFRSASELSNRPGCLRGLEVVEHEYHYLKN 110

Query: 121 KLHELFQIEQQRALAAGVRYPV 142
            +HELFQ+EQQR LAAGVRYP+
Sbjct: 111 MMHELFQLEQQRILAAGVRYPM 132


>AT3G21510.1 | Symbols: AHP1 | histidine-containing
           phosphotransmitter 1 | chr3:7578432-7579537 REVERSE
           LENGTH=154
          Length = 154

 Score =  109 bits (272), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 88/137 (64%), Gaps = 2/137 (1%)

Query: 8   LFHQGVXXXXXXXXXXXXXXSSPNFVSEVVNIYFHESEKLLRNLRALLMEREFSDYKKMG 67
           LF +G+              S+P+FVS+VV ++F +S+++L +L +L ++++  D+KK+ 
Sbjct: 17  LFLEGILDSQFLQLQQLQDESNPDFVSQVVTLFFQDSDRILNDL-SLSLDQQVVDFKKVD 75

Query: 68  IHLNQFMGSSSSIGAKRVTNVCVAFRAASEQNNRTGCLRALEMLEHEYCYLKNKLHELFQ 127
            H++Q  GSSSSIGA+RV N CV FR+  EQ N   C R L+ ++ EY  +KN+L  LF+
Sbjct: 76  PHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQVKQEYYLVKNRLETLFK 135

Query: 128 IEQQRALAAGVRYPVVQ 144
           +EQQ  +A+G   P V+
Sbjct: 136 LEQQ-IVASGGMIPAVE 151


>AT5G39340.1 | Symbols: AHP3, ATHP2 | histidine-containing
           phosphotransmitter 3 | chr5:15748941-15750248 FORWARD
           LENGTH=155
          Length = 155

 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 1/136 (0%)

Query: 8   LFHQGVXXXXXXXXXXXXXXSSPNFVSEVVNIYFHESEKLLRNLRALLMEREFSDYKKMG 67
           L+HQG                SP+FV+EVV ++F + EKL+ N+   L +    D+K +G
Sbjct: 19  LYHQGFLDDQFTELKKLQDECSPDFVAEVVTLFFEDCEKLISNMARALDQTGNVDFKLVG 78

Query: 68  IHLNQFMGSSSSIGAKRVTNVCVAFRAASEQNNRTGCLRALEMLEHEYCYLKNKLHELFQ 127
             ++Q  GSSSS+GAKRV  +CV  +   +  N  GC+R L+ ++ EY  LK KL +LF 
Sbjct: 79  SSVHQLKGSSSSVGAKRVKGLCVTLKECCDSQNYEGCVRCLQQVDIEYKTLKAKLQDLFN 138

Query: 128 IEQQRALAAGVRYPVV 143
           +EQQ  + AG R P V
Sbjct: 139 LEQQ-IVQAGGRIPQV 153


>AT1G03430.1 | Symbols: AHP5 | histidine-containing phosphotransfer
           factor 5 | chr1:848159-849235 FORWARD LENGTH=157
          Length = 157

 Score =  103 bits (256), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 80/136 (58%), Gaps = 1/136 (0%)

Query: 8   LFHQGVXXXXXXXXXXXXXXSSPNFVSEVVNIYFHESEKLLRNLRALLMEREFSDYKKMG 67
           L+ QG                +P+FV+EVV+++F +  KL+  +   L   +  D+K++ 
Sbjct: 20  LYQQGFLDNQFSELRKLQDEGTPDFVAEVVSLFFDDCSKLINTMSISLERPDNVDFKQVD 79

Query: 68  IHLNQFMGSSSSIGAKRVTNVCVAFRAASEQNNRTGCLRALEMLEHEYCYLKNKLHELFQ 127
             ++Q  GSSSS+GA+RV NVC++F+   +  NR GCLR L+ +++EY  LK KL +LF 
Sbjct: 80  SGVHQLKGSSSSVGARRVKNVCISFKECCDVQNREGCLRCLQQVDYEYKMLKTKLQDLFN 139

Query: 128 IEQQRALAAGVRYPVV 143
           +E+Q  L AG   P V
Sbjct: 140 LEKQ-ILQAGGTIPQV 154


>AT3G29350.1 | Symbols: AHP2 | histidine-containing
           phosphotransmitter 2 | chr3:11264379-11265408 REVERSE
           LENGTH=156
          Length = 156

 Score = 99.4 bits (246), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 75/131 (57%)

Query: 8   LFHQGVXXXXXXXXXXXXXXSSPNFVSEVVNIYFHESEKLLRNLRALLMEREFSDYKKMG 67
           L+ QG                SP+FVSEV++++F +  KL+ N+   L      D+ ++G
Sbjct: 19  LYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLISNMARALDTTGTVDFSQVG 78

Query: 68  IHLNQFMGSSSSIGAKRVTNVCVAFRAASEQNNRTGCLRALEMLEHEYCYLKNKLHELFQ 127
             ++Q  GSSSS+GAKRV  +CV+F+   E  N  GC+R L+ ++ EY  LK KL ++F 
Sbjct: 79  ASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDIEYKALKTKLQDMFN 138

Query: 128 IEQQRALAAGV 138
           +E+Q   A G+
Sbjct: 139 LEKQIIQAGGI 149


>AT3G16360.2 | Symbols: AHP4 | HPT phosphotransmitter 4 |
           chr3:5554351-5555518 FORWARD LENGTH=145
          Length = 145

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 1/134 (0%)

Query: 8   LFHQGVXXXXXXXXXXXXXXSSPNFVSEVVNIYFHESEKLLRNLRALLMEREFSDYKKMG 67
           LF QG               ++PNFV EV  +YF +S +L+ N+   L ER   D+ ++ 
Sbjct: 12  LFDQGYLDEQFMELEELQDDANPNFVEEVSALYFKDSARLINNIDQAL-ERGSFDFNRLD 70

Query: 68  IHLNQFMGSSSSIGAKRVTNVCVAFRAASEQNNRTGCLRALEMLEHEYCYLKNKLHELFQ 127
            +++QF GSS+SIGA +V   C  FR      N  GCLR  + L+ E+  L+ KL   FQ
Sbjct: 71  SYMHQFKGSSTSIGASKVKAECTTFREYCRAGNAEGCLRTFQQLKKEHSTLRKKLEHYFQ 130

Query: 128 IEQQRALAAGVRYP 141
           + +Q       R P
Sbjct: 131 LARQAGPKETARRP 144


>AT3G16360.1 | Symbols: AHP4 | HPT phosphotransmitter 4 |
           chr3:5554484-5555367 FORWARD LENGTH=127
          Length = 127

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 1/103 (0%)

Query: 28  SSPNFVSEVVNIYFHESEKLLRNLRALLMEREFSDYKKMGIHLNQFMGSSSSIGAKRVTN 87
           ++PNFV EV  +YF +S +L+ N+   L ER   D+ ++  +++QF GSS+SIGA +V  
Sbjct: 26  ANPNFVEEVSALYFKDSARLINNIDQAL-ERGSFDFNRLDSYMHQFKGSSTSIGASKVKA 84

Query: 88  VCVAFRAASEQNNRTGCLRALEMLEHEYCYLKNKLHELFQIEQ 130
            C  FR      N  GCLR  + L+ E+  L+ KL   FQ  Q
Sbjct: 85  ECTTFREYCRAGNAEGCLRTFQQLKKEHSTLRKKLEHYFQASQ 127


>AT3G29350.2 | Symbols: AHP2 | histidine-containing
           phosphotransmitter 2 | chr3:11264682-11265408 REVERSE
           LENGTH=114
          Length = 114

 Score = 69.7 bits (169), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 52/96 (54%)

Query: 8   LFHQGVXXXXXXXXXXXXXXSSPNFVSEVVNIYFHESEKLLRNLRALLMEREFSDYKKMG 67
           L+ QG                SP+FVSEV++++F +  KL+ N+   L      D+ ++G
Sbjct: 19  LYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLISNMARALDTTGTVDFSQVG 78

Query: 68  IHLNQFMGSSSSIGAKRVTNVCVAFRAASEQNNRTG 103
             ++Q  GSSSS+GAKRV  +CV+F+   E  N  G
Sbjct: 79  ASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEG 114