Miyakogusa Predicted Gene

Lj3g3v2185860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2185860.1 Non Chatacterized Hit- tr|I1KGZ4|I1KGZ4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39705
PE,75.3,0,Ribonuclease H-like,Ribonuclease H-like domain; seg,NULL;
Dimer_Tnp_hAT,HAT dimerisation; DUF4413,Do,CUFF.43625.1
         (595 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G42170.1 | Symbols:  | BED zinc finger ;hAT family dimerisati...   510   e-145
AT1G18560.1 | Symbols:  | BED zinc finger ;hAT family dimerisati...    98   2e-20

>AT3G42170.1 | Symbols:  | BED zinc finger ;hAT family dimerisation
           domain | chr3:14321838-14323928 FORWARD LENGTH=696
          Length = 696

 Score =  510 bits (1314), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 245/541 (45%), Positives = 352/541 (65%), Gaps = 24/541 (4%)

Query: 37  ISFDQERCNQDIAKMIILHDYPLHIVEQQGFIDFARILQPQFNPLCLKSIEADCVAIYLK 96
           ++F+Q++C Q+IAKMII+HDYPLH+V+  GF+ F + +QP F+ +   +++ DCVA YL 
Sbjct: 158 VAFNQDKCRQEIAKMIIMHDYPLHMVQHPGFVSFVQSIQPHFDAVSFNNVQGDCVATYLA 217

Query: 97  EKQNLLNFINGISARVNLTLDLWTSNQTTVYVFIRGHFIDRDWNLHHPILNVFMVPFPDS 156
           EKQN++  + GI  R  LTLD WTS  T  YVFI  H+ID DW +   +LNV M  +P++
Sbjct: 218 EKQNVMKSLEGIPGRFCLTLDFWTSKLTLGYVFITAHYIDSDWKIQKKLLNVLMESYPEA 277

Query: 157 DDSLSQIIQTCLSDWLLKGRLFTLALDKSFSSETVVGNLRGLLSVKNSVILNGQLLNQNC 216
           D++LS  +  C+S+W L+G+LF +  +   +S + V N+R  L +KN  IL+GQL+  NC
Sbjct: 278 DEALSLAVANCVSEWGLEGKLFNVTFNHP-ASNSAVENIRPQLCIKNPGILDGQLVIGNC 336

Query: 217 YAHVLSHLAVDALQTMGETISKVRESVKYVKSSESHEKKFLELKQQLQVPSMMKLLIDDQ 276
            A     LA D L+   + I  +R+SVK+VK+SESHE++F ELK+QLQVPS   L +DDQ
Sbjct: 337 VARTFGSLAKDVLEKGKDVIKNIRDSVKHVKTSESHEERFTELKEQLQVPSEKVLSLDDQ 396

Query: 277 CKWDTTYHMLVAACELKEVFACFDATDPNYTMTFTMDDWKQVETLCTYLKYLYDAANIVA 336
            +W+TTY MLVAA ELKEVF+C D  DP+Y    + +DW+ VE LCT+LK L++A + + 
Sbjct: 397 TQWNTTYMMLVAASELKEVFSCLDTADPDYKKPPSAEDWRHVEALCTFLKPLFEAVSTLQ 456

Query: 337 SQLYPTANIFFLEVSKLQVELADAAFCQDPFLSNLILPLHKYFDQYWRESCLILAIAVAM 396
           S   P+A  FF EV K Q +L+ A   +DPF++ +   + +  D+YWR+  L+LA+AV M
Sbjct: 457 STGNPSAVTFFHEVWKTQSDLSRAIAGEDPFVTGIAKTMQEKVDKYWRDCSLVLAMAVVM 516

Query: 397 DPRYKMNFVELTFSKIFGEDAKSWLRVVDDGLRELFFEYNSFMLPFTASNDYEEDGITLK 456
           DPR+KM  VE +FSKIFGEDA   ++ VDDG+ ELF EY +   P   ++          
Sbjct: 517 DPRFKMKLVEFSFSKIFGEDAGKNIKTVDDGIHELFTEYMALPSPQNTTS---------- 566

Query: 457 TEAYQEGSIDGSIFVDEDKLSDYECYISDFTGIQQYKSXXXXXXXXXXXXGVEEFDILSW 516
               + G  DG        LSD++ YI + TG Q  KS             V+EFD+L W
Sbjct: 567 ----EGGKADG--------LSDFDTYIMETTG-QNLKSELDQYLDETLLPRVQEFDVLDW 613

Query: 517 WRENGLRYPTLSRIASDVLSIPISTVSAEFVFDTEIRKMDSYRSSLGSLTLESLICAKDW 576
           W++N L+YPTLS++A D+LSIP+S  + ++VFD E R+MD Y++SL   T+E+LICA++W
Sbjct: 614 WKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALICAREW 673

Query: 577 F 577
            
Sbjct: 674 L 674


>AT1G18560.1 | Symbols:  | BED zinc finger ;hAT family dimerisation
           domain | chr1:6385614-6388005 FORWARD LENGTH=690
          Length = 690

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 115/569 (20%), Positives = 228/569 (40%), Gaps = 59/569 (10%)

Query: 39  FDQERCNQDIAKMIILHDYPLHIVEQQGFIDFARILQPQFNPLCLKSIEADCVAIYLKEK 98
            D +  N  + K + L   P   V++    +  + L+P       +  +A    ++   +
Sbjct: 132 LDYDHLNWLVLKWLALSSLPPSTVDETWLGNSFKFLKPSIQLWPAEKYKAILDEVFTSMR 191

Query: 99  QNLLNFINGISARVNLTLDLWTSNQTTVYVFIRGHFIDRDWNLHHPILNVFMVPFPDSDD 158
            ++   +  I ++V++TL  W S +   Y+ + G +ID +W+ H  +L++  +P+P    
Sbjct: 192 GDVKTTLEHIQSKVSVTLSFWNSYENIFYMSVTGQWIDENWSSHRLLLDICRIPYPSGGS 251

Query: 159 SLSQIIQTCLSDWLLKGRLFTLALDKSFSSETVVGNLRGLLSVKNSVILNGQLLNQNCY- 217
            +   +   L  + ++ R+     D S ++     +L+           +GQ +   CY 
Sbjct: 252 EIYNSLLKVLKTYAIEDRILCCTHDNSENAIHACHSLKEY--------FDGQKVLPFCYI 303

Query: 218 ---AHVLSHLAVDALQTMGETISKVRESVKYVKSSESHEKKFLELKQQLQVPSMMKLLID 274
              A  L+ +  + L T+   ISKVRE  + + +S      F++L    Q     KL ID
Sbjct: 304 PCAAQTLNDIIDEGLATIKPIISKVREFTQELNASTELSDDFIQLTTAYQ-EGNWKLPID 362

Query: 275 DQCKWDTTYHMLVAACE----LKEVFACFDATDPNYTMTFTMDDWKQVETLCTYLKY--L 328
              +W   Y M+   C+    L  V    +    N  M  +++    V  +  YL     
Sbjct: 363 ASSRWSGNYQMVNILCKASKSLDSVIRKNEDALENRMMLSSVEK-NAVTIVHNYLDLDSF 421

Query: 329 YDAANIVASQLYPTANIFFLEVSKLQVELADA-AFCQDP-FLSNLILPLHKYFDQYWRES 386
           +   N + +    T  +  L +  +   +      C +P +L      + +    Y  + 
Sbjct: 422 HKTTNDMCTNKDLTVGLALLFMDNISEMITTCQKSCHNPDWLRTCAESMAQKARSYNTQV 481

Query: 387 CLILA-IAVAMDPRYKMNFVELTFSKIFGEDAKSWLRVVDDGLRELFFEYNSFMLPFTAS 445
           C +   I   +DPR K  ++  T       + +S+   +D+        Y+S     + +
Sbjct: 482 CNVFTYITAILDPRIKTEYIPETI------NLESY---IDEARSHFIRNYSSSHFTSSMT 532

Query: 446 NDYEEDGITLKTEAYQEGSIDGSI-FVDEDKLSDYECYISD--FTGIQQYKSXXXXXXXX 502
           + Y       + +   EG   G+I F +E         +S+     + QY S        
Sbjct: 533 SGY-------RPQEVDEGG--GNISFAEEIARRKRRGSMSNNVVDELTQYLSESIVPM-- 581

Query: 503 XXXXGVEEFDILSWWRENGLRYPTLSRIASDVLSIPISTVSAEFVFDTEIRKMDSYRSSL 562
                  + D+L WW+ N  RYP LS +A D L++  ++ + E +F  +  ++D  +  +
Sbjct: 582 -------QTDVLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEEIFCGKGEEIDKQKYCM 634

Query: 563 GSLTLESLICAKDWFQS------KCLPID 585
              + +S+IC + W ++      KC  ID
Sbjct: 635 PHDSTQSVICIRSWIEAGMKLKYKCSEID 663