Miyakogusa Predicted Gene

Lj3g3v2184850.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2184850.1 Non Chatacterized Hit- tr|F6HYM4|F6HYM4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,31.31,0.0000004,seg,NULL,CUFF.43844.1
         (522 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G15290.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   138   9e-33

>AT1G15290.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
            superfamily protein | chr1:5257327-5264814 REVERSE
            LENGTH=1608
          Length = 1608

 Score =  138 bits (348), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 223/477 (46%), Gaps = 64/477 (13%)

Query: 61   ENGDLTRY-TPVTSEVVYETSSDEGWKEASSKGRSANAANRKFARRQRPHLSKLSI---- 115
            E GD+  +   V  + V E++ DEGW+EA SKGRS N A RK +R+++P L K  +    
Sbjct: 1178 ETGDIVVHRLNVDRQTVEESTLDEGWQEAYSKGRSGNGAGRK-SRQRQPDLMKKRMLLNK 1236

Query: 116  -NGSDRGISYRNDIASPLEKGAPKVIAGMSSPSRQSKARNLSLKEDSVNKQTKALLSKNX 174
             +  ++ +  +N I SPL+K +       SSP R  K   + +  ++   Q KA    + 
Sbjct: 1237 HHNRNQDVQQQN-IYSPLQKTSKGPSLSKSSPRRALKNAEIDVSTNTTKPQLKA----SG 1291

Query: 175  XXXXXXXXXXXXXXXYKEVAVAPPGTVLKPLLEKGEIERVSAENEICSSSSVMPLNEGSS 234
                           YKEVA+APPGTVLKP+LEK E+     E +I  +SS     E  S
Sbjct: 1292 AAAVTSTTLASKSLSYKEVALAPPGTVLKPMLEKLELNLERTETQIYRTSSASSGEESKS 1351

Query: 235  QSSIIN-PVSQEDKSEGTCEIESQQENSEPELETVS------LASDKA-KLAEANCSKLS 286
             + +++ P+   + +E  CE +  QE++E  +E ++      L S +  K ++ + +KLS
Sbjct: 1352 DTVMLDLPI---EGTELHCEKQESQESAE-SVENLTSESEGDLGSYRGKKTSDISRTKLS 1407

Query: 287  AAAKPFNPGTLSLSHQLNSASFTTIYDANVSQAVLVEPVLPPAAARVPCGPRSPLYYRTN 346
            A+A+P+NPG   +    +SA+    Y   V+         P + A V CG  SP YY   
Sbjct: 1408 ASAEPYNPGGFLVIDLQSSAATIGSYPIMVAD--------PISWAVVSCGIHSPPYYSAI 1459

Query: 347  YAFRMVRERSGFGAPRIMNPHAPEFVPRGASQTETGDS-EKNKLDDXXXXXXXXXXXXXX 405
            ++       +G G PR MNP APEFVPR + Q  +  + E   +                
Sbjct: 1460 HS-------NGVGTPRSMNPDAPEFVPRRSLQNSSQHAGEDASVSVDSSSCLKAEKDAVD 1512

Query: 406  XARQILLSFLVKSVHQNIDSTDESKVGDRKIENLGNSSDDIAKENAVIKIKYGNEKKNKT 465
              ++ L SF+VKS      S  E      K      S     K++AV +I Y  E++N  
Sbjct: 1513 LKKRELASFIVKS------SQKEVPAALSKTSPEAESGGTSEKDSAVTEIVYSREEEN-- 1564

Query: 466  VTHSRESEEQEKLDVTGKKDGDSEGFVVVT--NKKKNRQKITNGVSELYNQ-QSICA 519
                              +    EGFV+V    ++KN+ ++TN  + LY+Q  S+CA
Sbjct: 1565 -------------GANANETNGGEGFVIVAKKRRRKNKVRLTNVAAGLYHQPSSVCA 1608