Miyakogusa Predicted Gene

Lj3g3v2174820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2174820.1 Non Chatacterized Hit- tr|D8SWW0|D8SWW0_SELML
Putative uncharacterized protein OS=Selaginella
moelle,35.11,0.0000000003,coiled-coil,NULL; seg,NULL;
Occludin_ELL,Occludin/RNA polymerase II elongation factor, ELL
domain,CUFF.43621.1
         (427 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G21290.1 | Symbols:  | dentin sialophosphoprotein-related | c...   202   3e-52

>AT3G21290.1 | Symbols:  | dentin sialophosphoprotein-related |
            chr3:7482318-7488676 FORWARD LENGTH=1192
          Length = 1192

 Score =  202 bits (515), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 154/434 (35%), Positives = 235/434 (54%), Gaps = 25/434 (5%)

Query: 1    MGNGKKHSGKDFHVCEVSSMQKDKSRRDAQNENINAVEKKALRNSRDGSNGSKQSLFMDS 60
            +GN +K    D    E+ S +  K+ RD Q ++++ ++ K  RN +DG +  + SL  ++
Sbjct: 777  LGNVRKSDKGDHFPLEMLSSRSGKAFRDNQRDDVH-LKNKFPRNKKDGESAIRPSLPTET 835

Query: 61   NYQKQGEMVSKSKEGRQGTQSLLGTSPKDN-RLSLDKSPVVNGLGVSRQREASDLELGEF 119
            + +K  E+    K+ +  +   +G+SP D+ R  L K P  NG  +  Q++ S+LELGE 
Sbjct: 836  SDRKPDELDGSDKDPKNVSGLSIGSSPLDSQRTYLAKLPKGNGPVL--QKQVSELELGEL 893

Query: 120  REPTPEETHVAKPFERKGSFKHFENK-NTSEDRNSDITKVKPLLKATLDSRKQSSVLVSS 178
             EP  E+T + KP E K SF+    K +TSE    D  K +       DS+K +      
Sbjct: 894  PEPLGEDTAL-KPIEEKTSFRQSNLKPSTSEKLGIDSDKRR---SKKSDSKKAAP----- 944

Query: 179  GFPDNLESTDNHF-EDSTKSRSRVMQAHSQHLKSDNAEAGSQNNLTEINKFRNNEPGVSQ 237
              P  +  ++ H  EDS +S+   +Q+H Q+L   + E  SQN   E   +++ +     
Sbjct: 945  --PHTVNGSNEHVVEDSERSQKWALQSHGQNLTGTDTEISSQNKNLEDAAYKSRQKDSRA 1002

Query: 238  DI--DLNGRTESNRRAPANGSKQDTRRGINSYPAKESKRQTPYSLEEVADGGKDSVFAXX 295
             +   + G  E+N++ P    K  ++R   S  ++ESKR +  S+    +G KD+     
Sbjct: 1003 RVGNSVEGYGETNKKTPV--VKHGSKRASTSRSSRESKRHS--SVSNSINGHKDATSIPG 1058

Query: 296  XXXXXXXXXXXXXXXXXXXXXXXXXXPELKEPIMTFSQYREYVQEFRDKYDSYCSLHKIL 355
                                      PELK PI    QY+ Y+QE+ DKYDSY S++KIL
Sbjct: 1059 GSVVREKQMTSFGEEDSSYLKYEKASPELKGPISDHLQYKAYMQEYNDKYDSYHSINKIL 1118

Query: 356  ESYRNEFQKLGDKLEYAKGMD--RYYDIVEQLKESYRRCGPRHKRLKKIFVVLHQELENI 413
            ES+RN+FQKLG  L +AKG D  RY  IVEQ+KESY + G RHKRLKK+FVVLH+EL+++
Sbjct: 1119 ESHRNDFQKLGQDLGFAKGRDVERYNKIVEQIKESYCKYGERHKRLKKVFVVLHEELKHL 1178

Query: 414  KQRIKDYAHSYTKE 427
            KQR++DYA S+ K+
Sbjct: 1179 KQRMRDYASSHGKD 1192