Miyakogusa Predicted Gene

Lj3g3v2174810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2174810.1 Non Chatacterized Hit- tr|I1P8C0|I1P8C0_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,37.5,0.000000000006,seg,NULL,CUFF.43620.1
         (319 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G21290.1 | Symbols:  | dentin sialophosphoprotein-related | c...    72   7e-13

>AT3G21290.1 | Symbols:  | dentin sialophosphoprotein-related |
           chr3:7482318-7488676 FORWARD LENGTH=1192
          Length = 1192

 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 88/180 (48%), Gaps = 7/180 (3%)

Query: 12  EKEIPAKTKNALRNTPGGKGNIGLKPIDLQGMLISLLKDKPIGMTLKSMVKVVGDTHPNS 71
           EKE  A   N LR+T G +     K IDLQ +L+ +LK+ P  M+LK++ K VGD  PN 
Sbjct: 317 EKEPSAWKNNVLRDTSGREAINVNKEIDLQSLLVDILKEAP--MSLKALEKAVGDKVPNP 374

Query: 72  TXXXXXXXXXXXXXXXPGRYILRPEVDLANFKKPQTESGRSPEDSHNQ-IPAREELHDQR 130
                           P RY L+PE +L ++KK   +SG SPE  H Q +P  E   DQ 
Sbjct: 375 AKKIEPILKRIANFQAP-RYFLKPEAELESYKKHSPDSGSSPE--HQQLLPVTECSRDQL 431

Query: 131 SAPQGGGFEERVSNDNVGE-VIVQVKSKGEEKLNPLKIIDAQHTSPDIVGEKKGSDQSEG 189
             P     E+    +  GE  +  +     E+L+  + +D +H SP I  E+K S+  E 
Sbjct: 432 PVPGRNNTEKFSLCEQNGEGSLDCLPVHLVEQLSTQENVDIEHHSPGIFHEEKRSENREA 491