Miyakogusa Predicted Gene

Lj3g3v2174800.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2174800.1 Non Chatacterized Hit- tr|C0PJC4|C0PJC4_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,60.32,0.00000000000003,seg,NULL,CUFF.43616.1
         (160 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G21290.1 | Symbols:  | dentin sialophosphoprotein-related | c...   164   2e-41

>AT3G21290.1 | Symbols:  | dentin sialophosphoprotein-related |
           chr3:7482318-7488676 FORWARD LENGTH=1192
          Length = 1192

 Score =  164 bits (416), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 84/139 (60%), Positives = 96/139 (69%), Gaps = 3/139 (2%)

Query: 1   MIIRLAPDLVDEIKRLEAQGLNARMKFDXXXXXXXXXIIDVGGKEFRFTWSREPGDLCDI 60
           MIIRL+PDLVDEIKR+EAQG  A++KFD         II+VGGKEF+FTWS E G+LCDI
Sbjct: 93  MIIRLSPDLVDEIKRVEAQGGAAKIKFDAFPNNSTENIINVGGKEFKFTWSGEKGELCDI 152

Query: 61  YEEPQSXXXXXXXXXXSGCAWRKLNVQRILDESAKKQVKMRSKEAELKHKSRKAIVLEPG 120
           YEE QS          +GCAWRKLNV R LDES    +KMRS EAE + KSRKAIVL+PG
Sbjct: 153 YEEHQSGEDGNGLLIEAGCAWRKLNVLRTLDESTTSHMKMRSVEAEQRTKSRKAIVLDPG 212

Query: 121 NPHMKSQIKALAAVEATTW 139
           NP   S  K LA  E + W
Sbjct: 213 NP---SVTKQLAHAEGSPW 228