Miyakogusa Predicted Gene

Lj3g3v2170500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2170500.1 Non Chatacterized Hit- tr|B9SE10|B9SE10_RICCO
Putative uncharacterized protein OS=Ricinus communis G,31.12,2e-18,no
description,Mitochondrial glycoprotein; Mitochondrial glycoprotein
MAM33-like,Mitochondrial glyco,CUFF.43594.1
         (236 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G15870.1 | Symbols:  | Mitochondrial glycoprotein family prot...   215   2e-56
AT1G80720.1 | Symbols:  | Mitochondrial glycoprotein family prot...   194   5e-50
AT4G31930.1 | Symbols:  | Mitochondrial glycoprotein family prot...   161   3e-40
AT2G39795.1 | Symbols:  | Mitochondrial glycoprotein family prot...    78   7e-15
AT3G55605.1 | Symbols:  | Mitochondrial glycoprotein family prot...    73   1e-13
AT5G05990.1 | Symbols:  | Mitochondrial glycoprotein family prot...    70   9e-13
AT5G02050.1 | Symbols:  | Mitochondrial glycoprotein family prot...    70   1e-12

>AT1G15870.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr1:5457153-5458245 FORWARD LENGTH=242
          Length = 242

 Score =  215 bits (547), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 104/197 (52%), Positives = 134/197 (68%), Gaps = 3/197 (1%)

Query: 41  TYISDMRKSAFEGNITRLLRNEIQYELQSSPSDNPSNKFGSFAVDGRPGERWITLRRQFA 100
           +Y+S+MR++AFEGNI RL+R EIQ EL  SP   P   FG F VD RPGE+WI+LRR+F 
Sbjct: 48  SYVSEMRRTAFEGNILRLIRLEIQSELDHSPILQPEESFGPFTVDERPGEQWISLRRKFG 107

Query: 101 -NEDIKVEATMFDGAVPAPRSSGGVANADEMQLHITLIVSISKGDGGVLEITCSAWPDTI 159
             EDIK+EATMFDG+VP+ +S+   ++ +++QLHIT IV+ISKGDG  LEI CSAWPDTI
Sbjct: 108 EKEDIKIEATMFDGSVPSSKST--TSDPEDVQLHITFIVNISKGDGETLEIMCSAWPDTI 165

Query: 160 EIKRLLTRAKEKMPAEPYAGPXXXXXXXXXXXXXXXXXEVRGVDDELAIFLHQYMKRKDK 219
           +I +   R   +     Y GP                 E RG+ D+LA FLHQYMK KDK
Sbjct: 166 QITKFFVRKSSQNSPNAYIGPEFQEMEDELQDSVYRFLEERGISDDLAEFLHQYMKNKDK 225

Query: 220 SELVGWMERVKSFIERK 236
           +E + WME VKS++E+K
Sbjct: 226 AEYIRWMETVKSYVEQK 242


>AT1G80720.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr1:30336289-30337347 FORWARD LENGTH=190
          Length = 190

 Score =  194 bits (493), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 102/193 (52%), Positives = 123/193 (63%), Gaps = 5/193 (2%)

Query: 46  MRKSAFEGNITRLLRNEIQYELQSSPSDNPSNKFGSFAVDGRPGERWITLRRQFAN-EDI 104
           M+KSAF+GNI RL+RNEI+YEL  SP   P N FG F VD RPGE+WI+L+R F + EDI
Sbjct: 1   MQKSAFQGNILRLIRNEIEYELDHSPPLQPPNSFGPFTVDERPGEQWISLKRNFGDKEDI 60

Query: 105 KVEATMFDGAVPAPRSSGGVANADEMQLHITLIVSISK-GDGGVLEITCSAWPDTIEIKR 163
           K+EATMFD +VP  +S+       E  LHIT IV+ISK G    LEI CSAWPDTIEI +
Sbjct: 61  KIEATMFDRSVPTSKST---KTEPEYILHITFIVNISKAGATEALEIMCSAWPDTIEISK 117

Query: 164 LLTRAKEKMPAEPYAGPXXXXXXXXXXXXXXXXXEVRGVDDELAIFLHQYMKRKDKSELV 223
           L  R         Y GP                 E RG+ DELA+FLH+YMK K K+E V
Sbjct: 118 LCIRRGINTSPSSYGGPEFEELDDQLQDALYQFLEERGISDELAVFLHRYMKNKGKAEYV 177

Query: 224 GWMERVKSFIERK 236
            WME VKS++E+K
Sbjct: 178 RWMESVKSYVEQK 190


>AT4G31930.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr4:15449710-15450804 REVERSE LENGTH=234
          Length = 234

 Score =  161 bits (408), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 82/203 (40%), Positives = 122/203 (60%), Gaps = 3/203 (1%)

Query: 35  PHLHRRTYISDMRKSAFEGNITRLLRNEIQYELQSSPSDNPSNKFGSFAVDGRPGERWIT 94
           P+   R   +   KS F  NI R++RNEI+Y+   +P   P+ +F SF+V+  PGE+ I 
Sbjct: 33  PNHQSRDVTTSPAKSPFRSNILRIIRNEIEYQSDYAPPHQPATEFKSFSVEDCPGEQCIV 92

Query: 95  LRRQFA-NEDIKVEATMFDGAVPAPRSSGGVANADEMQLHITLIVSISKGDGG-VLEITC 152
           ++ +F  +EDIK+EATMFDG +  PR +G  A+  +++LHI+L+V ISK DG   +E  C
Sbjct: 93  MKGKFGEDEDIKMEATMFDGFMNVPR-AGLDASGHDVRLHISLLVDISKVDGSEEIEFLC 151

Query: 153 SAWPDTIEIKRLLTRAKEKMPAEPYAGPXXXXXXXXXXXXXXXXXEVRGVDDELAIFLHQ 212
           S WP+ IEI++L    + K+  +PY GP                  VRG+D EL  FLH+
Sbjct: 152 SVWPNRIEIRKLYKLRRNKITGQPYMGPNFGNLKYDFQTAIREFLRVRGIDAELCFFLHE 211

Query: 213 YMKRKDKSELVGWMERVKSFIER 235
           YM  KD+ EL+ W+ ++ SFI +
Sbjct: 212 YMMNKDRIELIQWLRKLNSFISQ 234


>AT2G39795.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr2:16597026-16598028 FORWARD LENGTH=250
          Length = 250

 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 6/211 (2%)

Query: 31  SCISPHLHRR-TYISDMRKSAFEGNITRLLRNEIQYELQSSPSDNPSNKF-GSFA--VDG 86
           S I P + R   Y + + + + E  + R++ +EI   LQS   D+      GSF   ++ 
Sbjct: 40  SSIRPFVSRALNYSTAIDRISSEQTLIRVIDSEINSALQSDNIDSDEEMTPGSFPFRIED 99

Query: 87  RPGERWITLRRQFANEDIKVEATMFDGAVPAPRSSGGVANADEMQLHITLIVSISKGDGG 146
           +PG + +TL R +  E IKV  +M                    +  I L+V+++K  G 
Sbjct: 100 KPGNQNVTLTRDYNGEHIKVVVSMPSLVSDENDDDDDDDEGPSNESSIPLVVTVTKKSGL 159

Query: 147 VLEITCSAWPDTIEIKRLLTRAKEKMPAEPYA--GPXXXXXXXXXXXXXXXXXEVRGVDD 204
            LE +C A+PD I I  L  +       +  A  GP                 E+RGV  
Sbjct: 160 TLEFSCMAFPDEIAIDALSVKHPGDSLEDQLANEGPDFEDLDENLKKTFYKFLEIRGVKA 219

Query: 205 ELAIFLHQYMKRKDKSELVGWMERVKSFIER 235
               FLH+YM RK   E   W++ VK F+E+
Sbjct: 220 STTNFLHEYMTRKVNREYFLWLKNVKEFMEQ 250


>AT3G55605.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr3:20622668-20623889 FORWARD LENGTH=258
          Length = 258

 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 8/161 (4%)

Query: 82  FAVDGRPGERWITLRRQFANEDIKVEATMFDGAVPAPRSSGGVA------NADEMQLHIT 135
           F ++  PG R +TL R++  E IKVE +M   A+                +    +  I 
Sbjct: 97  FKIEDNPGHRTVTLTREYNGEQIKVEVSMPGLAMDENEDDVDDDEDGDGRHEKSNESSIP 156

Query: 136 LIVSISKGDGGVLEITCSAWPDTIEIKRLLTRAKEKMPAE--PYAGPXXXXXXXXXXXXX 193
           L+V+++K  G  LE +C+A+PD I I  L     +    E   Y GP             
Sbjct: 157 LVVTVTKKSGLSLEFSCTAFPDEIVIDGLSVNRPDDSSEEQLTYDGPDFQELDENMRKSF 216

Query: 194 XXXXEVRGVDDELAIFLHQYMKRKDKSELVGWMERVKSFIE 234
               E RG+      FL++YM +KD  E + W++++K+F++
Sbjct: 217 HKFLETRGIKASATDFLYEYMMKKDSREYLLWLKKLKTFVQ 257


>AT5G05990.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr5:1806911-1807895 REVERSE LENGTH=259
          Length = 259

 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 37/207 (17%)

Query: 55  ITRLLRNEIQY--------ELQSSPSDNPSNKFGSFAVDGRPGERWITLRRQFANEDIKV 106
           + R++  EI Y         ++ +PS  P      F ++ +PG + +TL R++  E +KV
Sbjct: 62  LLRIIEEEIGYAEKADDYHRVEETPSGFP------FEMEDKPGGKIVTLTREYEGETVKV 115

Query: 107 EATMFDGAVPAPRSSGGVANADEM-------------QLHITLIVSISKGDGGVLEITCS 153
           E  M +                E              Q ++ L+V++SK  G  LE  C+
Sbjct: 116 EVHMTNLVTGDKEDDEDDEEEAENEEDEDEDKPLKPKQSNVPLLVTLSKKTGPSLEFRCT 175

Query: 154 AWPDTIEIKRLLTRAKEKMPAEP------YAGPXXXXXXXXXXXXXXXXXEVRGVDDELA 207
           A+PD I IK +        P +P      Y GP                 E+RG+   + 
Sbjct: 176 AFPDRIAIKDMWV----TFPDDPSKDELAYEGPSFRVLDEKLRKAFHRYIEIRGIKPSMI 231

Query: 208 IFLHQYMKRKDKSELVGWMERVKSFIE 234
            FLH+YM  KD  E + W++ +K+F++
Sbjct: 232 NFLHEYMINKDSREHLLWLKSLKNFVK 258


>AT5G02050.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr5:403239-404244 REVERSE LENGTH=267
          Length = 267

 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 16/207 (7%)

Query: 44  SDMRKSAFEGNITRLLRNEIQYEL-QSSPSD-----NPSNKFGSFAVDGRPGERWITLRR 97
           S + K+  + N+  ++ +EI+  + + +P D     +    F  F +    GER + L R
Sbjct: 62  SAISKTTADENLVSVIESEIECAVAEEAPHDTDFLEDKPEGF-PFEIIDNSGERTVLLTR 120

Query: 98  QFANEDIKVEA---TMFDGAVPAPRSSGGVANADEMQ-----LHITLIVSISKGDGGVLE 149
           +F +E I+VE      +D       +       DE Q     + + ++VS+ KGDG  LE
Sbjct: 121 KFEDETIQVEVDSVASYDDEDEEEEAEPNNEEDDEDQESSGKVRVPMVVSVQKGDGVCLE 180

Query: 150 ITCSAWPDTIEIKRLLTRAKEKMPAE-PYAGPXXXXXXXXXXXXXXXXXEVRGVDDELAI 208
              SA+PD I I  L  +  +    +  Y GP                 E+RG+      
Sbjct: 181 FGVSAYPDEIVIDSLSIKQPQGSDNDLAYEGPDFDDLDENLQKAFHRYLEIRGIKPSFTT 240

Query: 209 FLHQYMKRKDKSELVGWMERVKSFIER 235
           FL  Y+  KD  E + W++ +KSF+E+
Sbjct: 241 FLADYVANKDSREYLQWLKDLKSFVEK 267