Miyakogusa Predicted Gene

Lj3g3v2169480.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2169480.1 tr|I3SYN2|I3SYN2_LOTJA Golgi SNAP receptor
complex member 1 OS=Lotus japonicus PE=2 SV=1,99.11,0,V-SNARE_C,NULL;
GOS-28 SNARE- RELATED,Golgi SNAP receptor complex, subunit 1;
coiled-coil,NULL,CUFF.43592.1
         (224 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G15880.1 | Symbols: GOS11, atgos11 | golgi snare 11 | chr1:54...   362   e-101
AT2G45200.1 | Symbols: GOS12, ATGOS12 | golgi snare 12 | chr2:18...   149   1e-36
AT2G45200.2 | Symbols: GOS12 | golgi snare 12 | chr2:18637689-18...   146   9e-36

>AT1G15880.1 | Symbols: GOS11, atgos11 | golgi snare 11 |
           chr1:5458718-5460089 REVERSE LENGTH=223
          Length = 223

 Score =  362 bits (930), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/224 (78%), Positives = 200/224 (89%), Gaps = 1/224 (0%)

Query: 1   MEVPSSWDALRKQARNLEAQLDERMSSFRKLVSASVSAKTDAAENDLESWIEQLLKQLQQ 60
           M+VPSSWDALRKQAR +EAQLDE+M S+R+LVS    +K+D  E+DLE+ I+ LL+QLQQ
Sbjct: 1   MDVPSSWDALRKQARKIEAQLDEQMHSYRRLVSTKALSKSDGNESDLEAGIDLLLRQLQQ 60

Query: 61  VNSQMQAWVSSGGTDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLLEDFKEFDR 120
           VN+QMQAWVSSGG++MVSHTLTRHQEILQD+TQEFYR RSSLRAKQEHASLLEDF+EFDR
Sbjct: 61  VNAQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFYRHRSSLRAKQEHASLLEDFREFDR 120

Query: 121 TRLDLETGAGSEQHALLKERASISRNTGHVDTVISQAQATLGALVFQRSTFGGINSKISN 180
           TRLDLE G GSEQ AL+KE   I+RNT  +D VISQAQATLG LVFQRSTFGGINSK+SN
Sbjct: 121 TRLDLEDGYGSEQ-ALIKEHMGINRNTAQMDGVISQAQATLGTLVFQRSTFGGINSKLSN 179

Query: 181 VSGRLPTVNSILGAIKRKKSMDTIILSLVASVCIFLIFIYWLTK 224
           V+ RLPTVN+IL AIKRKKSMDTIILSLVA+VC FLIFIYW+TK
Sbjct: 180 VASRLPTVNTILAAIKRKKSMDTIILSLVAAVCTFLIFIYWITK 223


>AT2G45200.1 | Symbols: GOS12, ATGOS12 | golgi snare 12 |
           chr2:18637689-18639640 REVERSE LENGTH=239
          Length = 239

 Score =  149 bits (376), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/235 (36%), Positives = 133/235 (56%), Gaps = 21/235 (8%)

Query: 5   SSWDALRKQARNLEAQLDERMSSFRKLV----------SASVSAKTDAAENDLESWIEQL 54
           S W+ LR++AR +E  LD ++SS+ KL           + S +  +  +   +E  I+ L
Sbjct: 11  SGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSGRSWKSMEMEIQSL 70

Query: 55  LKQLQQVNSQM-QAWVSSGGTDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLL- 112
           L++L  +N  M +   S+  T  V+  L RH++IL + TQEF R++ ++ + +EHA LL 
Sbjct: 71  LEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNINSLREHAELLS 130

Query: 113 ---EDFKEFDRTRLDLETGAGSEQHALLKERASISRNTGHVDTVISQAQATLGALVFQRS 169
              +D  E+        +G+ S    +L+ERASI  +  H+D VI QAQAT   L  QRS
Sbjct: 131 SVRDDISEYK------ASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVLGSQRS 184

Query: 170 TFGGINSKISNVSGRLPTVNSILGAIKRKKSMDTIILSLVASVCIFLIFIYWLTK 224
            F  +  K+ N+  + P +  +LG+IKRK+S DT+ILS V + C   + IYWL+K
Sbjct: 185 LFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIYWLSK 239


>AT2G45200.2 | Symbols: GOS12 | golgi snare 12 |
           chr2:18637689-18639640 REVERSE LENGTH=257
          Length = 257

 Score =  146 bits (369), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 132/253 (52%), Gaps = 39/253 (15%)

Query: 5   SSWDALRKQARNLEAQLDERMSSFRKLVSASVSAKTDAAEN------------------- 45
           S W+ LR++AR +E  LD ++SS+ KL +      TD   N                   
Sbjct: 11  SGWEELRREARKIEGDLDVKLSSYAKLGARFTQGDTDLVMNYEKVLKCVLVSGYVDTGSP 70

Query: 46  ---------DLESWIEQLLKQLQQVNSQM-QAWVSSGGTDMVSHTLTRHQEILQDITQEF 95
                     +E  I+ LL++L  +N  M +   S+  T  V+  L RH++IL + TQEF
Sbjct: 71  TVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEF 130

Query: 96  YRLRSSLRAKQEHASLL----EDFKEFDRTRLDLETGAGSEQHALLKERASISRNTGHVD 151
            R++ ++ + +EHA LL    +D  E+        +G+ S    +L+ERASI  +  H+D
Sbjct: 131 RRIKGNINSLREHAELLSSVRDDISEYK------ASGSMSPGVQVLRERASIHGSISHID 184

Query: 152 TVISQAQATLGALVFQRSTFGGINSKISNVSGRLPTVNSILGAIKRKKSMDTIILSLVAS 211
            VI QAQAT   L  QRS F  +  K+ N+  + P +  +LG+IKRK+S DT+ILS V +
Sbjct: 185 DVIGQAQATRAVLGSQRSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIA 244

Query: 212 VCIFLIFIYWLTK 224
            C   + IYWL+K
Sbjct: 245 ACTLFLIIYWLSK 257