Miyakogusa Predicted Gene

Lj3g3v2168470.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2168470.2 Non Chatacterized Hit- tr|I1KVK5|I1KVK5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41077
PE,85.55,0,XH,Uncharacterised domain XH; TRANSCRIPTION FACTOR
X1-LIKE,NULL; RIBONUCLEASE P PROTEIN SUBUNIT P38-,CUFF.43619.2
         (176 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G15910.1 | Symbols:  | XH/XS domain-containing protein | chr1...   210   4e-55
AT4G00380.1 | Symbols:  | XH/XS domain-containing protein | chr4...   199   8e-52
AT1G13790.1 | Symbols:  | XH/XS domain-containing protein | chr1...   160   3e-40
AT1G80790.1 | Symbols:  | XH/XS domain-containing protein | chr1...   160   4e-40
AT3G48670.2 | Symbols: IDN2, RDM12 | XH/XS domain-containing pro...   148   2e-36
AT3G48670.1 | Symbols: IDN2, RDM12 | XH/XS domain-containing pro...   148   2e-36
AT3G12550.2 | Symbols:  | XH/XS domain-containing protein | chr3...   145   1e-35
AT3G12550.1 | Symbols:  | XH/XS domain-containing protein | chr3...   145   1e-35
AT3G29375.1 | Symbols:  | XH domain-containing protein | chr3:11...   135   1e-32
AT4G01780.1 | Symbols:  | XH/XS domain-containing protein | chr4...   130   4e-31
AT5G59390.1 | Symbols:  | XH/XS domain-containing protein | chr5...   117   6e-27
AT4G01180.1 | Symbols:  | XH/XS domain-containing protein | chr4...   102   9e-23
AT2G16490.1 | Symbols:  | XH domain-containing protein | chr2:71...    76   1e-14
AT3G29375.2 | Symbols:  | XH domain-containing protein | chr3:11...    66   9e-12

>AT1G15910.1 | Symbols:  | XH/XS domain-containing protein |
           chr1:5465951-5468723 FORWARD LENGTH=634
          Length = 634

 Score =  210 bits (535), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 103/176 (58%), Positives = 129/176 (73%), Gaps = 1/176 (0%)

Query: 1   MEAMNQQLFVKERQSNDELQEARKELIKGLDDMLNGPRTNIGLKRMGELDQKVFVNCCKK 60
           +E+MN  L  KERQSNDE+Q ARK+LI GL  +L G  T+IG+KRMGELD+K F++ CK 
Sbjct: 460 LESMNSVLMTKERQSNDEIQAARKKLIAGLTGLL-GAETDIGVKRMGELDEKPFLDVCKL 518

Query: 61  RFPLEDAGTKGVELCSLWQENVKNSSWHPFKVINADDKPESIINEDDNQLRQLKQEWGDE 120
           R+   +A  +   LCS WQEN+KN SW PFK     D  E +++EDD QL++LK+EWG E
Sbjct: 519 RYSANEAAVEAATLCSTWQENLKNPSWQPFKHEGTGDGAEEVVDEDDEQLKKLKREWGKE 578

Query: 121 IHSAVTTALKELLEYNASGGYTVFELWNFKEQRKATLKEVISYIVDKIKPPKRKRA 176
           +H+AV TAL E+ EYNASG YT  ELWNFKE RKATLKEVI++I + IK  KRKR 
Sbjct: 579 VHNAVKTALVEMNEYNASGRYTTPELWNFKEGRKATLKEVITFISNDIKILKRKRT 634


>AT4G00380.1 | Symbols:  | XH/XS domain-containing protein |
           chr4:167959-170448 FORWARD LENGTH=635
          Length = 635

 Score =  199 bits (506), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 97/176 (55%), Positives = 126/176 (71%), Gaps = 1/176 (0%)

Query: 1   MEAMNQQLFVKERQSNDELQEARKELIKGLDDMLNGPRTNIGLKRMGELDQKVFVNCCKK 60
           +E+MN  L  KERQSNDE+Q AR+++I GL  +L G  ++IG+KRMGELD+K F++ CK 
Sbjct: 461 LESMNSVLMTKERQSNDEIQAARQKMIAGLTGLL-GAESDIGVKRMGELDEKPFLDVCKL 519

Query: 61  RFPLEDAGTKGVELCSLWQENVKNSSWHPFKVINADDKPESIINEDDNQLRQLKQEWGDE 120
           R+   +A  +   LCS W+EN+KN SW PFK     D  E +++EDD QL++LK+EWG E
Sbjct: 520 RYSANEARVEAATLCSTWKENLKNPSWQPFKREGTGDGAEEVVDEDDEQLKKLKREWGKE 579

Query: 121 IHSAVTTALKELLEYNASGGYTVFELWNFKEQRKATLKEVISYIVDKIKPPKRKRA 176
           +H+AV  AL E+ EYNASG Y   ELWNFKE RKATLKEVI++I   IK  KRKR 
Sbjct: 580 VHNAVKAALVEMNEYNASGRYPTSELWNFKEGRKATLKEVITFISTDIKNLKRKRT 635


>AT1G13790.1 | Symbols:  | XH/XS domain-containing protein |
           chr1:4727438-4730229 FORWARD LENGTH=736
          Length = 736

 Score =  160 bits (406), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 78/165 (47%), Positives = 116/165 (70%), Gaps = 2/165 (1%)

Query: 2   EAMNQQLFVKERQSNDELQEARKELIKGLDDMLNGPRTNIGLKRMGELDQKVFVNCCKKR 61
           E++ Q L VK   +NDELQ+ARK LI+ + ++    R  IG+KRMG LD+  F    K++
Sbjct: 562 ESLYQTLVVKHGYTNDELQDARKALIRSMRELTT--RAYIGVKRMGALDETPFKKVAKEK 619

Query: 62  FPLEDAGTKGVELCSLWQENVKNSSWHPFKVINADDKPESIINEDDNQLRQLKQEWGDEI 121
           +P  +A  K  ELCSLW+E++ +S+WHP KV+  D   +  +NE+D +L++L++E G+E+
Sbjct: 620 YPAVEADKKAEELCSLWEEHLGDSAWHPIKVVEKDGIAKEELNEEDEKLQELRKELGEEV 679

Query: 122 HSAVTTALKELLEYNASGGYTVFELWNFKEQRKATLKEVISYIVD 166
           ++AVT ALKE  EYN SG Y V ELWNFK+ RKA++KE + Y+V+
Sbjct: 680 YAAVTQALKERNEYNGSGRYIVPELWNFKQNRKASIKEGVVYLVN 724


>AT1G80790.1 | Symbols:  | XH/XS domain-containing protein |
           chr1:30360280-30362856 FORWARD LENGTH=634
          Length = 634

 Score =  160 bits (405), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 87/177 (49%), Positives = 128/177 (72%), Gaps = 2/177 (1%)

Query: 1   MEAMNQQLFVKERQSNDELQEARKELIKGLDDMLNGPRTNIGLKRMGELDQKVFVNCCKK 60
           +E  N  L VKER+SNDE+ EARK LI  L ++++  R  I +KRMGEL++K F+  C++
Sbjct: 459 LEDTNSALMVKERKSNDEIVEARKFLITELRELVSD-RNIIRVKRMGELEEKPFMTACRQ 517

Query: 61  RFPLED-AGTKGVELCSLWQENVKNSSWHPFKVINADDKPESIINEDDNQLRQLKQEWGD 119
           R  +E+ A  +   LCS WQE VK+S+W PFK +   D+ + +++E+D ++++L++EWG+
Sbjct: 518 RCTVEEEAQVQYAMLCSKWQEKVKDSAWQPFKHVGTGDRKKEVVDEEDEEIKKLREEWGE 577

Query: 120 EIHSAVTTALKELLEYNASGGYTVFELWNFKEQRKATLKEVISYIVDKIKPPKRKRA 176
           E+ +AV TAL+EL E+N SG Y+V ELWN K+ RKATLKEVI YI  ++K  KR+RA
Sbjct: 578 EVKNAVKTALEELNEFNPSGRYSVPELWNSKQGRKATLKEVIDYITQQVKTLKRRRA 634


>AT3G48670.2 | Symbols: IDN2, RDM12 | XH/XS domain-containing
           protein | chr3:18031240-18033615 FORWARD LENGTH=647
          Length = 647

 Score =  148 bits (373), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 119/178 (66%), Gaps = 6/178 (3%)

Query: 1   MEAMNQQLFVKERQSNDELQEARKELIKGLDDMLNGPRTNIGLKRMGELDQKVFVNCCKK 60
           ++  NQ L ++ER++NDELQEA KEL+    +++    TNIG+KRMGEL  K FV+  ++
Sbjct: 472 LDKFNQTLILRERRTNDELQEAHKELV----NIMKEWNTNIGVKRMGELVTKPFVDAMQQ 527

Query: 61  RFPLEDAGTKGVELCSLWQENVKNSSWHPFKVINAD--DKPESIINEDDNQLRQLKQEWG 118
           ++  +D   + VE+  LW+  +K+S WHPFK +  +  D+   +I++ D +LR+LK + G
Sbjct: 528 KYCQQDVEDRAVEVLQLWEHYLKDSDWHPFKRVKLENEDREVEVIDDRDEKLRELKADLG 587

Query: 119 DEIHSAVTTALKELLEYNASGGYTVFELWNFKEQRKATLKEVISYIVDKIKPPKRKRA 176
           D  ++AVT AL E+ EYN SG Y   ELWNFK  +KATL+E ++ ++D+ +  KRKR 
Sbjct: 588 DGPYNAVTKALLEINEYNPSGRYITTELWNFKADKKATLEEGVTCLLDQWEKAKRKRG 645


>AT3G48670.1 | Symbols: IDN2, RDM12 | XH/XS domain-containing
           protein | chr3:18031240-18033615 FORWARD LENGTH=647
          Length = 647

 Score =  148 bits (373), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 119/178 (66%), Gaps = 6/178 (3%)

Query: 1   MEAMNQQLFVKERQSNDELQEARKELIKGLDDMLNGPRTNIGLKRMGELDQKVFVNCCKK 60
           ++  NQ L ++ER++NDELQEA KEL+    +++    TNIG+KRMGEL  K FV+  ++
Sbjct: 472 LDKFNQTLILRERRTNDELQEAHKELV----NIMKEWNTNIGVKRMGELVTKPFVDAMQQ 527

Query: 61  RFPLEDAGTKGVELCSLWQENVKNSSWHPFKVINAD--DKPESIINEDDNQLRQLKQEWG 118
           ++  +D   + VE+  LW+  +K+S WHPFK +  +  D+   +I++ D +LR+LK + G
Sbjct: 528 KYCQQDVEDRAVEVLQLWEHYLKDSDWHPFKRVKLENEDREVEVIDDRDEKLRELKADLG 587

Query: 119 DEIHSAVTTALKELLEYNASGGYTVFELWNFKEQRKATLKEVISYIVDKIKPPKRKRA 176
           D  ++AVT AL E+ EYN SG Y   ELWNFK  +KATL+E ++ ++D+ +  KRKR 
Sbjct: 588 DGPYNAVTKALLEINEYNPSGRYITTELWNFKADKKATLEEGVTCLLDQWEKAKRKRG 645


>AT3G12550.2 | Symbols:  | XH/XS domain-containing protein |
           chr3:3978669-3981372 FORWARD LENGTH=638
          Length = 638

 Score =  145 bits (366), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 108/169 (63%), Gaps = 6/169 (3%)

Query: 1   MEAMNQQLFVKERQSNDELQEARKELIKGLDDMLNGPRTNIGLKRMGELDQKVFVNCCKK 60
           +   NQ L V+ER+SNDELQEAR+ LI  L DM      +IG+KRMGELD K F+   + 
Sbjct: 465 LNQFNQDLVVQERKSNDELQEARRALISNLRDM----GLHIGVKRMGELDTKPFMKAMRI 520

Query: 61  RFPLEDAGTKGVELCSLWQENVKNSSWHPFKVINADDKPE--SIINEDDNQLRQLKQEWG 118
           ++  ED     VE+  LW+E +K+  WHPFK I  +       +I+EDD +LR LK E G
Sbjct: 521 KYCQEDLEDWAVEVIQLWEEYLKDPDWHPFKRIKLETAETIVEVIDEDDEKLRTLKNELG 580

Query: 119 DEIHSAVTTALKELLEYNASGGYTVFELWNFKEQRKATLKEVISYIVDK 167
           D+ + AV  AL E+ EYN SG Y   ELWNF+E RKATL+E ++ ++++
Sbjct: 581 DDAYQAVANALLEINEYNPSGRYISSELWNFREDRKATLEEGVNSLLEQ 629


>AT3G12550.1 | Symbols:  | XH/XS domain-containing protein |
           chr3:3978669-3981372 FORWARD LENGTH=638
          Length = 638

 Score =  145 bits (366), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 108/169 (63%), Gaps = 6/169 (3%)

Query: 1   MEAMNQQLFVKERQSNDELQEARKELIKGLDDMLNGPRTNIGLKRMGELDQKVFVNCCKK 60
           +   NQ L V+ER+SNDELQEAR+ LI  L DM      +IG+KRMGELD K F+   + 
Sbjct: 465 LNQFNQDLVVQERKSNDELQEARRALISNLRDM----GLHIGVKRMGELDTKPFMKAMRI 520

Query: 61  RFPLEDAGTKGVELCSLWQENVKNSSWHPFKVINADDKPE--SIINEDDNQLRQLKQEWG 118
           ++  ED     VE+  LW+E +K+  WHPFK I  +       +I+EDD +LR LK E G
Sbjct: 521 KYCQEDLEDWAVEVIQLWEEYLKDPDWHPFKRIKLETAETIVEVIDEDDEKLRTLKNELG 580

Query: 119 DEIHSAVTTALKELLEYNASGGYTVFELWNFKEQRKATLKEVISYIVDK 167
           D+ + AV  AL E+ EYN SG Y   ELWNF+E RKATL+E ++ ++++
Sbjct: 581 DDAYQAVANALLEINEYNPSGRYISSELWNFREDRKATLEEGVNSLLEQ 629


>AT3G29375.1 | Symbols:  | XH domain-containing protein |
           chr3:11280151-11281829 FORWARD LENGTH=355
          Length = 355

 Score =  135 bits (340), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 113/174 (64%), Gaps = 6/174 (3%)

Query: 2   EAMNQQLFVKERQSNDELQEARKELIKGLDDMLNGPRTNIGLKRMGELDQKVFVNCCKKR 61
           E +   L VKER +NDE+ EA+K LI  + D+ +  RT I +KRMG LD + FV   K+R
Sbjct: 182 EGLINALLVKERYANDEILEAQKLLISQMRDLTDD-RTTIRVKRMGHLDVEPFVKASKRR 240

Query: 62  FPLEDAGTKGVELCSLWQENVKNSSWHPFKVINADDKPESIINEDDNQLRQLKQEWGDEI 121
               D      E+ + W+EN+++  W PFK +   +  + +++E+D +L+ L++EWG+E+
Sbjct: 241 LTGNDT-----EVYAEWEENLRDPHWQPFKRVETGNIVKEVVDEEDEKLKNLREEWGEEV 295

Query: 122 HSAVTTALKELLEYNASGGYTVFELWNFKEQRKATLKEVISYIVDKIKPPKRKR 175
            +AV TAL+E+ E+N SG + V  LWN ++ R ATL+EVI+++  +IK  KRK+
Sbjct: 296 MNAVKTALEEVNEFNPSGRHVVPTLWNSEQGRVATLREVIAHMTHEIKTLKRKK 349


>AT4G01780.1 | Symbols:  | XH/XS domain-containing protein |
           chr4:767310-769246 FORWARD LENGTH=472
          Length = 472

 Score =  130 bits (328), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 108/175 (61%), Gaps = 18/175 (10%)

Query: 4   MNQQLFVKERQSNDELQEARKELIKGLDDMLNGPRTNIGLKRMGELDQKVFVNCCKKRFP 63
            NQ L ++ER++NDELQEARKEL+                  MGEL +K FV+  ++++ 
Sbjct: 312 FNQTLILRERRTNDELQEARKELVNC----------------MGELVRKPFVDAMQQKYC 355

Query: 64  LEDAGTKGVELCSLWQENVKNSSWHPFKVINAD--DKPESIINEDDNQLRQLKQEWGDEI 121
            ED   + VE+  LW+  + +  WHP+K +  +  D+   +I++ D +LR+LK + GD  
Sbjct: 356 QEDVEDRAVEVLQLWEHYINDPDWHPYKRVKLENQDREVEVIDDRDEKLRELKADLGDGP 415

Query: 122 HSAVTTALKELLEYNASGGYTVFELWNFKEQRKATLKEVISYIVDKIKPPKRKRA 176
           ++AVT AL E+ EYN SG Y   ELWNFKE ++ATL+E ++ ++D+ +  KRKR 
Sbjct: 416 YNAVTKALLEINEYNPSGRYITTELWNFKEDKRATLEEGVTCLLDQWEKAKRKRG 470


>AT5G59390.1 | Symbols:  | XH/XS domain-containing protein |
           chr5:23954934-23957151 FORWARD LENGTH=561
          Length = 561

 Score =  117 bits (292), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 108/176 (61%), Gaps = 10/176 (5%)

Query: 8   LFVKERQSNDELQEARKELIK---GLDDMLNGPRTNIGLKRMGELDQKVFVNCCKKRFPL 64
           L  KER +NDE Q+  KE+I+     ++++   +  I +KRMG+L+   F+    K+  +
Sbjct: 383 LARKERATNDEYQDVLKEMIQVWNANEELMKQEK--IRVKRMGQLNPAPFLPAVMKKHKV 440

Query: 65  --EDAGTKGVELCSLWQENVKNSSWHPFKVINADDKPESIINEDDNQLRQLKQEWGDEIH 122
               A  K ++LCS+W+ N+ +  W PF+V  +D  P+ +++E+D +LR LK ++G+E++
Sbjct: 441 TQSKAENKAMKLCSVWEANIGDVQWTPFRVDESDGTPKRVVDENDEKLRTLKNQYGEEVY 500

Query: 123 SAVTTALKELLEYNASGGYTVFELWNFKEQRKATLKE---VISYIVDKIKPPKRKR 175
           + V     E+ E+NASG Y + ELWN++E RKAT++E   V+  I  K+   K KR
Sbjct: 501 NEVVRTKLEIEEHNASGSYVILELWNYEENRKATMEEATDVMLKIRSKLAAMKNKR 556


>AT4G01180.1 | Symbols:  | XH/XS domain-containing protein |
           chr4:501287-503394 REVERSE LENGTH=554
          Length = 554

 Score =  102 bits (255), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 103/188 (54%), Gaps = 29/188 (15%)

Query: 8   LFVKERQSNDELQEARKELIK---GLDDMLNGPRTNIGLKRMGELDQKVFVNCCKKRFPL 64
           L  KER +NDE Q+ARKE+IK     ++++   +  I +K MGEL+   F+     +   
Sbjct: 373 LARKERATNDEYQDARKEMIKVWKANEELMKQEK--IRVKIMGELNPAPFLPAVMNKH-- 428

Query: 65  EDAGTKGVELCSLWQENVKNSSWHPFKVINADDKP--------------ESIINEDDNQL 110
                K + LCS+W   + +  W PF+V  +D  P              + +++E+D +L
Sbjct: 429 -----KAMMLCSVWAAEIGDVQWTPFRVDESDGTPKQKLHISQHSKCEMQRVVDENDEKL 483

Query: 111 RQLKQEWGDEIHSAVTTALKELLEYNASGGYTVFELWNFKEQRKATLKEVISYIV---DK 167
           R LK ++G+E++S V  A  E+ E+NASG Y   ELWN++E RKAT++E+   ++    K
Sbjct: 484 RMLKNQYGEEVYSEVVRAKLEMEEHNASGSYETEELWNYEENRKATIEEITDVMLKIRSK 543

Query: 168 IKPPKRKR 175
           +   K KR
Sbjct: 544 LAAMKNKR 551


>AT2G16490.1 | Symbols:  | XH domain-containing protein |
           chr2:7146000-7147296 REVERSE LENGTH=179
          Length = 179

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 56/74 (75%)

Query: 102 IINEDDNQLRQLKQEWGDEIHSAVTTALKELLEYNASGGYTVFELWNFKEQRKATLKEVI 161
           ++NE+   L++LK++WG+++H+ +   +K++ EYNA G Y   ELWNFK++ K+TLKEVI
Sbjct: 75  LVNEEYEPLKKLKEKWGEDVHNTLKITIKDMDEYNACGKYPTPELWNFKKKLKSTLKEVI 134

Query: 162 SYIVDKIKPPKRKR 175
            ++++ IK  KR+R
Sbjct: 135 KFLLNDIKSLKRQR 148


>AT3G29375.2 | Symbols:  | XH domain-containing protein |
           chr3:11280882-11281573 FORWARD LENGTH=176
          Length = 176

 Score = 66.2 bits (160), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 6/92 (6%)

Query: 2   EAMNQQLFVKERQSNDELQEARKELIKGLDDMLNGPRTNIGLKRMGELDQKVFVNCCKKR 61
           E +   L VKER +NDE+ EA+K LI  + D L   RT I +KRMG LD + FV   K+R
Sbjct: 59  EGLINALLVKERYANDEILEAQKLLISQMRD-LTDDRTTIRVKRMGHLDVEPFVKASKRR 117

Query: 62  FPLEDAGTKGVELCSLWQENVKNSSWHPFKVI 93
               D      E+ + W+EN+++  W PFK +
Sbjct: 118 LTGNDT-----EVYAEWEENLRDPHWQPFKRV 144