Miyakogusa Predicted Gene

Lj3g3v2168430.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2168430.2 tr|I3SEH4|I3SEH4_LOTJA 40S ribosomal protein S12
OS=Lotus japonicus PE=2 SV=1,99.29,0,Ribosomal_L7Ae,Ribosomal protein
L7Ae/L30e/S12e/Gadd45; RIBSOMALS12E,Ribosomal protein S12e;
seg,NUL,CUFF.43949.2
         (140 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G32060.2 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd4...   194   2e-50
AT2G32060.3 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd4...   194   2e-50
AT2G32060.1 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd4...   194   2e-50
AT1G15930.1 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd4...   190   2e-49
AT1G15930.2 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd4...   190   2e-49

>AT2G32060.2 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd45
           family protein | chr2:13639228-13640104 REVERSE
           LENGTH=144
          Length = 144

 Score =  194 bits (493), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/122 (75%), Positives = 106/122 (86%), Gaps = 1/122 (0%)

Query: 19  IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQLCVLAEDCDQPDYVKLVK 78
           IP E MD+ TAL+L +RKSRAYGG+ RGLHE AK+IEK   QLCVLAEDC+QPDYVKLVK
Sbjct: 21  IP-EDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVK 79

Query: 79  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 138
           ALCA+H++ LLTVPSAKTLGEWAGLCKIDSEG ARKV GCSC+V+KDFGEE  A N+V +
Sbjct: 80  ALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIKDFGEETTALNIVKK 139

Query: 139 HV 140
           H+
Sbjct: 140 HL 141


>AT2G32060.3 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd45
           family protein | chr2:13639228-13640104 REVERSE
           LENGTH=144
          Length = 144

 Score =  194 bits (493), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/122 (75%), Positives = 106/122 (86%), Gaps = 1/122 (0%)

Query: 19  IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQLCVLAEDCDQPDYVKLVK 78
           IP E MD+ TAL+L +RKSRAYGG+ RGLHE AK+IEK   QLCVLAEDC+QPDYVKLVK
Sbjct: 21  IP-EDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVK 79

Query: 79  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 138
           ALCA+H++ LLTVPSAKTLGEWAGLCKIDSEG ARKV GCSC+V+KDFGEE  A N+V +
Sbjct: 80  ALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIKDFGEETTALNIVKK 139

Query: 139 HV 140
           H+
Sbjct: 140 HL 141


>AT2G32060.1 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd45
           family protein | chr2:13639228-13640104 REVERSE
           LENGTH=144
          Length = 144

 Score =  194 bits (493), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/122 (75%), Positives = 106/122 (86%), Gaps = 1/122 (0%)

Query: 19  IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQLCVLAEDCDQPDYVKLVK 78
           IP E MD+ TAL+L +RKSRAYGG+ RGLHE AK+IEK   QLCVLAEDC+QPDYVKLVK
Sbjct: 21  IP-EDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVK 79

Query: 79  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 138
           ALCA+H++ LLTVPSAKTLGEWAGLCKIDSEG ARKV GCSC+V+KDFGEE  A N+V +
Sbjct: 80  ALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIKDFGEETTALNIVKK 139

Query: 139 HV 140
           H+
Sbjct: 140 HL 141


>AT1G15930.1 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd45
           family protein | chr1:5471702-5472741 FORWARD LENGTH=144
          Length = 144

 Score =  190 bits (483), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 93/122 (76%), Positives = 105/122 (86%), Gaps = 1/122 (0%)

Query: 19  IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQLCVLAEDCDQPDYVKLVK 78
           IP E MD+MTAL+L LRK+RAYGG+ RGLHE AK+IEK   QL VLAEDC+QPDYVKLVK
Sbjct: 21  IP-EDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRVAQLVVLAEDCNQPDYVKLVK 79

Query: 79  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 138
           ALCA+H V LLTVPSAKTLGEWAGLCKIDSEG ARKV GCSC+VVKDFGEE  A ++V +
Sbjct: 80  ALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVVKDFGEETTALSIVNK 139

Query: 139 HV 140
           H+
Sbjct: 140 HI 141


>AT1G15930.2 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd45
           family protein | chr1:5471702-5472741 FORWARD LENGTH=144
          Length = 144

 Score =  190 bits (483), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 93/122 (76%), Positives = 105/122 (86%), Gaps = 1/122 (0%)

Query: 19  IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQLCVLAEDCDQPDYVKLVK 78
           IP E MD+MTAL+L LRK+RAYGG+ RGLHE AK+IEK   QL VLAEDC+QPDYVKLVK
Sbjct: 21  IP-EDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRVAQLVVLAEDCNQPDYVKLVK 79

Query: 79  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 138
           ALCA+H V LLTVPSAKTLGEWAGLCKIDSEG ARKV GCSC+VVKDFGEE  A ++V +
Sbjct: 80  ALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVVKDFGEETTALSIVNK 139

Query: 139 HV 140
           H+
Sbjct: 140 HI 141