Miyakogusa Predicted Gene
- Lj3g3v2098140.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2098140.1 Non Chatacterized Hit- tr|I1KGT2|I1KGT2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.15645
PE,79.53,0,Adenine_glyco,Methyladenine glycosylase; seg,NULL; no
description,DNA glycosylase; SUBFAMILY NOT NAM,CUFF.43580.1
(381 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G57970.2 | Symbols: | DNA glycosylase superfamily protein | ... 344 5e-95
AT5G57970.1 | Symbols: | DNA glycosylase superfamily protein | ... 344 5e-95
AT1G15970.1 | Symbols: | DNA glycosylase superfamily protein | ... 307 7e-84
AT1G80850.1 | Symbols: | DNA glycosylase superfamily protein | ... 306 1e-83
AT1G75090.1 | Symbols: | DNA glycosylase superfamily protein | ... 261 5e-70
AT1G13635.2 | Symbols: | DNA glycosylase superfamily protein | ... 237 1e-62
AT1G13635.1 | Symbols: | DNA glycosylase superfamily protein | ... 237 1e-62
AT5G44680.1 | Symbols: | DNA glycosylase superfamily protein | ... 215 5e-56
AT3G12710.1 | Symbols: | DNA glycosylase superfamily protein | ... 209 4e-54
>AT5G57970.2 | Symbols: | DNA glycosylase superfamily protein |
chr5:23467316-23468910 FORWARD LENGTH=347
Length = 347
Score = 344 bits (883), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 180/344 (52%), Positives = 212/344 (61%), Gaps = 11/344 (3%)
Query: 1 MSGPPRVRSMNVAVGDHEARPVLVPACNKARPAAVDGRKPVKKSVLEREREKSRGAPPTP 60
MSG PRV+SMNVA + E R L KA P K V KS+ + ER S G +
Sbjct: 1 MSGAPRVQSMNVA--EAETRSTLGSTAKKASPFIT--HKAVSKSLRKLERSSS-GRTGSD 55
Query: 61 PQRVLVSPV--VSRRQDHHHLAVLKNL----XXXXXXXXXXXXXXXXXXXXXXXXXXKVA 114
+ +P VS H L L
Sbjct: 56 EKTSYATPTETVSSSSQKHTLNAASILRRHEQNLNSNLSLNASFSSDASMDSFHSRASTG 115
Query: 115 RRVRKKQAGARTEKXXXXXXXXXXXXXXXXXXXGLESKKRCAWVTANTEPCYIAFHDEEW 174
R +R G+R++ G E+KKRC WVT N++PCYI FHDEEW
Sbjct: 116 RLIRSYSVGSRSKSYPSKPRSVVSEGALDSPPNGSETKKRCTWVTPNSDPCYIVFHDEEW 175
Query: 175 GVPVHDDKKLFELLSFSGALAELTWPTILSKRQLFREVFLDFDPNVVSKMNEKKIVAPGN 234
GVPVHDDK+LFELL SGALAE TWPTILSKRQ FREVF DFDPN + K+NEKKI+ PG+
Sbjct: 176 GVPVHDDKRLFELLVLSGALAEHTWPTILSKRQAFREVFADFDPNAIVKINEKKIIGPGS 235
Query: 235 SACTLLSELRLRSIIENARQMCKVIEEFGSFDTFIWNFVNNKPIVSQFRYARQVPVKSPK 294
A TLLS+L+LR++IENARQ+ KVIEE+GSFD +IW+FV NK IVS+FRY RQVP K+PK
Sbjct: 236 PASTLLSDLKLRAVIENARQILKVIEEYGSFDKYIWSFVKNKAIVSKFRYQRQVPAKTPK 295
Query: 295 AEFISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHLISCFRFKEC 338
AE ISKDLVRRGFRSVGPTV+Y+FMQ AG+TNDHL SCFRF C
Sbjct: 296 AEVISKDLVRRGFRSVGPTVVYSFMQAAGITNDHLTSCFRFHHC 339
>AT5G57970.1 | Symbols: | DNA glycosylase superfamily protein |
chr5:23467316-23468910 FORWARD LENGTH=347
Length = 347
Score = 344 bits (883), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 180/344 (52%), Positives = 212/344 (61%), Gaps = 11/344 (3%)
Query: 1 MSGPPRVRSMNVAVGDHEARPVLVPACNKARPAAVDGRKPVKKSVLEREREKSRGAPPTP 60
MSG PRV+SMNVA + E R L KA P K V KS+ + ER S G +
Sbjct: 1 MSGAPRVQSMNVA--EAETRSTLGSTAKKASPFIT--HKAVSKSLRKLERSSS-GRTGSD 55
Query: 61 PQRVLVSPV--VSRRQDHHHLAVLKNL----XXXXXXXXXXXXXXXXXXXXXXXXXXKVA 114
+ +P VS H L L
Sbjct: 56 EKTSYATPTETVSSSSQKHTLNAASILRRHEQNLNSNLSLNASFSSDASMDSFHSRASTG 115
Query: 115 RRVRKKQAGARTEKXXXXXXXXXXXXXXXXXXXGLESKKRCAWVTANTEPCYIAFHDEEW 174
R +R G+R++ G E+KKRC WVT N++PCYI FHDEEW
Sbjct: 116 RLIRSYSVGSRSKSYPSKPRSVVSEGALDSPPNGSETKKRCTWVTPNSDPCYIVFHDEEW 175
Query: 175 GVPVHDDKKLFELLSFSGALAELTWPTILSKRQLFREVFLDFDPNVVSKMNEKKIVAPGN 234
GVPVHDDK+LFELL SGALAE TWPTILSKRQ FREVF DFDPN + K+NEKKI+ PG+
Sbjct: 176 GVPVHDDKRLFELLVLSGALAEHTWPTILSKRQAFREVFADFDPNAIVKINEKKIIGPGS 235
Query: 235 SACTLLSELRLRSIIENARQMCKVIEEFGSFDTFIWNFVNNKPIVSQFRYARQVPVKSPK 294
A TLLS+L+LR++IENARQ+ KVIEE+GSFD +IW+FV NK IVS+FRY RQVP K+PK
Sbjct: 236 PASTLLSDLKLRAVIENARQILKVIEEYGSFDKYIWSFVKNKAIVSKFRYQRQVPAKTPK 295
Query: 295 AEFISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHLISCFRFKEC 338
AE ISKDLVRRGFRSVGPTV+Y+FMQ AG+TNDHL SCFRF C
Sbjct: 296 AEVISKDLVRRGFRSVGPTVVYSFMQAAGITNDHLTSCFRFHHC 339
>AT1G15970.1 | Symbols: | DNA glycosylase superfamily protein |
chr1:5486544-5488494 REVERSE LENGTH=352
Length = 352
Score = 307 bits (787), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 164/348 (47%), Positives = 217/348 (62%), Gaps = 18/348 (5%)
Query: 1 MSGPPRVRSMNVAVGDHEARPVLVPACNKA--RPAAVDGRKPV-KKSVLEREREKSRGAP 57
MS PPR RS+N + E R VL P NK +P + KP+ +K++++ + EK++ P
Sbjct: 1 MSVPPRFRSVNS--DEREFRSVLGPTGNKLQRKPPGMKLEKPMMEKTIIDSKDEKAK-KP 57
Query: 58 PTPPQRVLVSPVVSRRQDHHHLAVL--KNLXXXXXXXXXXXXXXXXXXXXXXXXXXKVAR 115
TP SP + +Q + + KN +
Sbjct: 58 TTP-----ASPRTTLKQCSSLCSSILRKNSASMTASYSSDASSSCESSPLSVASSSSCKK 112
Query: 116 RVRKKQAGARTEKXXXXXXXXXXXXXXXXXXXGLESKKRCAWVTANTEPCYIAFHDEEWG 175
VR+ + + T K + +KRCAW+T +PCY+AFHDEEWG
Sbjct: 113 VVRRSGSVSSTRKLSVGKEEEKVSGDCFA-----DGRKRCAWITPKADPCYVAFHDEEWG 167
Query: 176 VPVHDDKKLFELLSFSGALAELTWPTILSKRQLFREVFLDFDPNVVSKMNEKKIVAPGNS 235
VPVHDDKKLFELL SGALAEL+W ILS+R + REVF+DFDP V+++N+KK+ APG +
Sbjct: 168 VPVHDDKKLFELLCLSGALAELSWTDILSRRHILREVFMDFDPVAVAELNDKKLTAPGTA 227
Query: 236 ACTLLSELRLRSIIENARQMCKVIEEFGSFDTFIWNFVNNKPIVSQFRYARQVPVKSPKA 295
A +LLSE+++RSI++N+R + K+I E GS ++WNFVNNKP SQFRY RQVPVK+ KA
Sbjct: 228 AISLLSEVKIRSILDNSRHVRKIIAECGSLKKYMWNFVNNKPTQSQFRYQRQVPVKTSKA 287
Query: 296 EFISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHLISCFRFKECTSNAE 343
EFISKDLVRRGFRSV PTVIY+FMQ AGLTNDHLI CFR+++C +AE
Sbjct: 288 EFISKDLVRRGFRSVSPTVIYSFMQAAGLTNDHLIGCFRYQDCCVDAE 335
>AT1G80850.1 | Symbols: | DNA glycosylase superfamily protein |
chr1:30385607-30387272 REVERSE LENGTH=327
Length = 327
Score = 306 bits (785), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 139/197 (70%), Positives = 161/197 (81%)
Query: 150 ESKKRCAWVTANTEPCYIAFHDEEWGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLF 209
+ +KRCAW+T ++ CYIAFHDEEWGVPVHDDK+LFELLS SGALAEL+W ILSKRQLF
Sbjct: 131 DGRKRCAWITPKSDQCYIAFHDEEWGVPVHDDKRLFELLSLSGALAELSWKDILSKRQLF 190
Query: 210 REVFLDFDPNVVSKMNEKKIVAPGNSACTLLSELRLRSIIENARQMCKVIEEFGSFDTFI 269
REVF+DFDP +S++ KKI +P +A TLLSE +LRSI+ENA Q+CK+I FGSFD +I
Sbjct: 191 REVFMDFDPIAISELTNKKITSPEIAATTLLSEQKLRSILENANQVCKIIGAFGSFDKYI 250
Query: 270 WNFVNNKPIVSQFRYARQVPVKSPKAEFISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHL 329
WNFVN KP SQFRY RQVPVK+ KAE ISKDLVRRGFRSV PTVIY+FMQ AGLTNDHL
Sbjct: 251 WNFVNQKPTQSQFRYPRQVPVKTSKAELISKDLVRRGFRSVSPTVIYSFMQTAGLTNDHL 310
Query: 330 ISCFRFKECTSNAETVN 346
CFR +C + ET N
Sbjct: 311 TCCFRHHDCMTKDETGN 327
>AT1G75090.1 | Symbols: | DNA glycosylase superfamily protein |
chr1:28187647-28189612 REVERSE LENGTH=329
Length = 329
Score = 261 bits (667), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 111/203 (54%), Positives = 156/203 (76%)
Query: 153 KRCAWVTANTEPCYIAFHDEEWGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLFREV 212
KRC W+T N++P Y+ FHDEEWGVPV DDKKLFELL FS ALAE +WP+IL +R FR++
Sbjct: 119 KRCHWITPNSDPIYVLFHDEEWGVPVRDDKKLFELLVFSQALAEFSWPSILRRRDDFRKL 178
Query: 213 FLDFDPNVVSKMNEKKIVAPGNSACTLLSELRLRSIIENARQMCKVIEEFGSFDTFIWNF 272
F +FDP+ +++ EK++++ + C +LSE +LR+I+ENA+ + KV +EFGSF + W F
Sbjct: 179 FEEFDPSAIAQFTEKRLMSLRVNGCLILSEQKLRAIVENAKSVLKVKQEFGSFSNYCWRF 238
Query: 273 VNNKPIVSQFRYARQVPVKSPKAEFISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHLISC 332
VN+KP+ + +RY RQVPVKSPKAE+ISKD+++RGFR VGPTV+Y+F+Q +G+ NDHL +C
Sbjct: 239 VNHKPLRNGYRYGRQVPVKSPKAEYISKDMMQRGFRCVGPTVMYSFLQASGIVNDHLTAC 298
Query: 333 FRFKECTSNAETVNKESSLNSKV 355
FR++EC E K +K+
Sbjct: 299 FRYQECNVETERETKSHETETKL 321
>AT1G13635.2 | Symbols: | DNA glycosylase superfamily protein |
chr1:4674248-4675784 FORWARD LENGTH=311
Length = 311
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 98/191 (51%), Positives = 142/191 (74%)
Query: 153 KRCAWVTANTEPCYIAFHDEEWGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLFREV 212
KRC W+T ++ Y+ FHD++WGVPV+DD LFE L+ SG L + W IL +++ FRE
Sbjct: 115 KRCNWITKKSDEVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRKEHFREA 174
Query: 213 FLDFDPNVVSKMNEKKIVAPGNSACTLLSELRLRSIIENARQMCKVIEEFGSFDTFIWNF 272
F +FDPN V+KM EK+I ++ +L E R+R I++NA+ + KV+ EFGSF +F+W F
Sbjct: 175 FCEFDPNRVAKMGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFSSFVWGF 234
Query: 273 VNNKPIVSQFRYARQVPVKSPKAEFISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHLISC 332
++ KPI+++F+Y+R VP++SPKAE ISKD+++RGFR VGP ++++FMQ AGLT DHL+ C
Sbjct: 235 MDYKPIINKFKYSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTIDHLVDC 294
Query: 333 FRFKECTSNAE 343
FR +C S AE
Sbjct: 295 FRHGDCVSLAE 305
>AT1G13635.1 | Symbols: | DNA glycosylase superfamily protein |
chr1:4674248-4675784 FORWARD LENGTH=311
Length = 311
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 98/191 (51%), Positives = 142/191 (74%)
Query: 153 KRCAWVTANTEPCYIAFHDEEWGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLFREV 212
KRC W+T ++ Y+ FHD++WGVPV+DD LFE L+ SG L + W IL +++ FRE
Sbjct: 115 KRCNWITKKSDEVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRKEHFREA 174
Query: 213 FLDFDPNVVSKMNEKKIVAPGNSACTLLSELRLRSIIENARQMCKVIEEFGSFDTFIWNF 272
F +FDPN V+KM EK+I ++ +L E R+R I++NA+ + KV+ EFGSF +F+W F
Sbjct: 175 FCEFDPNRVAKMGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFSSFVWGF 234
Query: 273 VNNKPIVSQFRYARQVPVKSPKAEFISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHLISC 332
++ KPI+++F+Y+R VP++SPKAE ISKD+++RGFR VGP ++++FMQ AGLT DHL+ C
Sbjct: 235 MDYKPIINKFKYSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTIDHLVDC 294
Query: 333 FRFKECTSNAE 343
FR +C S AE
Sbjct: 295 FRHGDCVSLAE 305
>AT5G44680.1 | Symbols: | DNA glycosylase superfamily protein |
chr5:18024461-18025893 REVERSE LENGTH=353
Length = 353
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 139/193 (72%), Gaps = 2/193 (1%)
Query: 150 ESKKRCAWVTANTEPCYIAFHDEEWGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLF 209
E KKRC+++T +++P Y+A+HD+EWGVPVHDD LFELL +GA W ++L +R F
Sbjct: 161 EKKKRCSFITTSSDPIYVAYHDKEWGVPVHDDNLLFELLVLTGAQVGSDWTSVLKRRNTF 220
Query: 210 REVFLDFDPNVVSKMNEKKIVAPGNSACTLLSELRLRSIIENARQMCKVIEEFGSFDTFI 269
RE F F+ +V+ NEKKI + N LS++ ++++NA+Q+ KV + GSF+ +I
Sbjct: 221 REAFSGFEAELVADFNEKKIQSIVNDYGINLSQVL--AVVDNAKQILKVKRDLGSFNKYI 278
Query: 270 WNFVNNKPIVSQFRYARQVPVKSPKAEFISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHL 329
W F+ +KP+ +++ +++PVK+ K+E ISKD+VRRGFR VGPTVI++ MQ AGLTNDHL
Sbjct: 279 WGFMKHKPVTTKYTSCQKIPVKTSKSETISKDMVRRGFRFVGPTVIHSLMQAAGLTNDHL 338
Query: 330 ISCFRFKECTSNA 342
I+C R ECT+ A
Sbjct: 339 ITCPRHLECTAMA 351
>AT3G12710.1 | Symbols: | DNA glycosylase superfamily protein |
chr3:4040572-4041828 REVERSE LENGTH=312
Length = 312
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 136/187 (72%), Gaps = 2/187 (1%)
Query: 153 KRCAWVTANTEPCYIAFHDEEWGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLFREV 212
+RC+++T ++P Y+A+HDEEWGVPVHDDK LFELL+ SGA W + L KR +R+
Sbjct: 122 QRCSFLTPTSDPIYVAYHDEEWGVPVHDDKTLFELLTLSGAQVGSDWTSTLRKRHDYRKA 181
Query: 213 FLDFDPNVVSKMNEKKIVAPGNSACTLLSELRLRSIIENARQMCKVIEEFGSFDTFIWNF 272
F++F+ VV+K+ EK++ A +S ++R ++ENA+++ ++ + F S + ++W F
Sbjct: 182 FMEFEAEVVAKLTEKEMNAISIEYKIEMS--KVRGVVENAKKIVEIKKAFVSLEKYLWGF 239
Query: 273 VNNKPIVSQFRYARQVPVKSPKAEFISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHLISC 332
VN+KPI + ++ ++PVK+ K+E ISKD+VRRGFR VGPTV+++FMQ AGLTNDHLI+C
Sbjct: 240 VNHKPISTNYKLGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLITC 299
Query: 333 FRFKECT 339
R CT
Sbjct: 300 CRHAPCT 306