Miyakogusa Predicted Gene

Lj3g3v2062700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2062700.1 CUFF.43545.1
         (43 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G24130.1 | Symbols:  | Leucine-rich receptor-like protein kin...    63   4e-11

>AT2G24130.1 | Symbols:  | Leucine-rich receptor-like protein kinase
           family protein | chr2:10258148-10261220 FORWARD
           LENGTH=980
          Length = 980

 Score = 62.8 bits (151), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/39 (66%), Positives = 33/39 (84%)

Query: 1   MAYLHHHSPVRDKHCDLKPGNVLPNDNMTALVSDFWITR 39
           +AYLHH+SPV+  HCDLKP N+L +D MTALV+DF I+R
Sbjct: 773 IAYLHHYSPVKVVHCDLKPSNILLDDEMTALVTDFGISR 811