Miyakogusa Predicted Gene

Lj3g3v2058550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2058550.1 Non Chatacterized Hit- tr|Q9C8H2|Q9C8H2_ARATH
Putative uncharacterized protein F19C24.21 (Fragment)
,100,0.00000000000004,no description,FMN-binding split barrel;
Pyrid_oxidase_2,NULL; CREG1 PROTEIN,NULL; seg,NULL;
FMN-bin,CUFF.43536.1
         (204 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G51560.1 | Symbols:  | Pyridoxamine 5'-phosphate oxidase fami...   193   6e-50
AT3G21140.1 | Symbols:  | Pyridoxamine 5'-phosphate oxidase fami...   183   8e-47
AT3G03890.1 | Symbols:  | FMN binding | chr3:999667-1001996 REVE...    70   7e-13
AT3G03890.2 | Symbols:  | FMN binding | chr3:999837-1001996 REVE...    70   8e-13

>AT1G51560.1 | Symbols:  | Pyridoxamine 5'-phosphate oxidase family
           protein | chr1:19119900-19121859 REVERSE LENGTH=392
          Length = 392

 Score =  193 bits (491), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 88/94 (93%), Positives = 92/94 (97%)

Query: 104 LFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDF 163
           LFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMS+MHHRREGYPFGSLVDF
Sbjct: 126 LFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSKMHHRREGYPFGSLVDF 185

Query: 164 APDSMGHPVFSFSPLAIHTRNLLANPRCTLVVQV 197
           APD MGHP+FSFSPLAIHTRN+LA PRCTLVVQ+
Sbjct: 186 APDPMGHPIFSFSPLAIHTRNILAEPRCTLVVQI 219


>AT3G21140.1 | Symbols:  | Pyridoxamine 5'-phosphate oxidase family
           protein | chr3:7409696-7412086 REVERSE LENGTH=387
          Length = 387

 Score =  183 bits (464), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 83/94 (88%), Positives = 89/94 (94%)

Query: 104 LFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDF 163
           LFRTPISGGVQ+ATSAH LPRPALAVRNL+EQARFAHLCTVMS+MHHRREGYPFGSLVDF
Sbjct: 122 LFRTPISGGVQNATSAHALPRPALAVRNLLEQARFAHLCTVMSKMHHRREGYPFGSLVDF 181

Query: 164 APDSMGHPVFSFSPLAIHTRNLLANPRCTLVVQV 197
           APD MGHP+F FSPLAIHTRNLL  PRC+LVVQ+
Sbjct: 182 APDRMGHPIFLFSPLAIHTRNLLNEPRCSLVVQI 215


>AT3G03890.1 | Symbols:  | FMN binding | chr3:999667-1001996 REVERSE
           LENGTH=321
          Length = 321

 Score = 70.5 bits (171), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 42/55 (76%)

Query: 141 LCTVMSRMHHRREGYPFGSLVDFAPDSMGHPVFSFSPLAIHTRNLLANPRCTLVV 195
           +C ++S    + EGYP GS+VDFA D+ G P+ + S LA+HT++LLANP+C+L++
Sbjct: 95  ICGMLSTFSQKYEGYPSGSMVDFACDADGSPILAVSSLAVHTKDLLANPKCSLLI 149


>AT3G03890.2 | Symbols:  | FMN binding | chr3:999837-1001996 REVERSE
           LENGTH=305
          Length = 305

 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 42/55 (76%)

Query: 141 LCTVMSRMHHRREGYPFGSLVDFAPDSMGHPVFSFSPLAIHTRNLLANPRCTLVV 195
           +C ++S    + EGYP GS+VDFA D+ G P+ + S LA+HT++LLANP+C+L++
Sbjct: 95  ICGMLSTFSQKYEGYPSGSMVDFACDADGSPILAVSSLAVHTKDLLANPKCSLLI 149