Miyakogusa Predicted Gene
- Lj3g3v2042270.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2042270.1 Non Chatacterized Hit- tr|I1KG54|I1KG54_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,74.6,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.43503.1
(252 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31590.1 | Symbols: ATCSLC05, CSLC05, ATCSLC5, CSLC5 | Cellul... 325 1e-89
AT2G24630.1 | Symbols: ATCSLC08, CSLC08, ATCSLC8 | Glycosyl tran... 306 1e-83
AT4G07960.1 | Symbols: ATCSLC12, CSLC12 | Cellulose-synthase-lik... 209 1e-54
AT3G28180.1 | Symbols: ATCSLC04, CSLC04, ATCSLC4, CSLC4 | Cellul... 181 3e-46
AT3G07330.1 | Symbols: ATCSLC06, CSLC06, ATCSLC6, CSLC6 | Cellul... 158 4e-39
AT1G24070.1 | Symbols: ATCSLA10, CSLA10 | cellulose synthase-lik... 65 5e-11
AT4G13410.1 | Symbols: ATCSLA15, CSLA15 | Nucleotide-diphospho-s... 58 6e-09
AT1G23480.2 | Symbols: ATCSLA03, CSLA03, ATCSLA3, CSLA3 | cellul... 57 8e-09
AT1G23480.1 | Symbols: ATCSLA03, CSLA03, ATCSLA3, CSLA3 | cellul... 57 8e-09
AT2G35650.1 | Symbols: ATCSLA07, CSLA07, ATCSLA7, CSLA7 | cellul... 52 3e-07
>AT4G31590.1 | Symbols: ATCSLC05, CSLC05, ATCSLC5, CSLC5 |
Cellulose-synthase-like C5 | chr4:15309889-15312336
REVERSE LENGTH=692
Length = 692
Score = 325 bits (834), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/253 (66%), Positives = 188/253 (74%), Gaps = 11/253 (4%)
Query: 1 MAPSFDFSRWWSKDSSRKGNPVVVTMENPNYSVVEIDGPDSAFQPVEKGRGRNAKQFTWV 60
MAP DFS WW+KD+ RKG PVVV MENPNYSVVEIDGPDSAF+PVEK RG+NAKQ TWV
Sbjct: 1 MAPRLDFSDWWAKDT-RKGTPVVVKMENPNYSVVEIDGPDSAFRPVEKSRGKNAKQVTWV 59
Query: 61 LLLKAHRAVGCVAWLGNSLYSLLGNVKKRLILGHGGSAESDKSGKTRFLLGVIVTFLVMA 120
LLLKAHRAVGC+ WL +SLLG +KKRL H +E K G+ R+L I FL ++
Sbjct: 60 LLLKAHRAVGCLTWLATVFWSLLGAIKKRLSFTHPLGSE--KLGRDRWLFTAIKLFLAVS 117
Query: 121 LAFLTFELVAHFNGWHYFQQHNSLHIP-QTLEIKGWFHTVYVGWLEFRADYIAPIIQSLS 179
L L FE+VA+F GWHYFQ SLHIP TLEI+ FH VYVGWL RADYIAP I++LS
Sbjct: 118 LVILGFEIVAYFRGWHYFQS-PSLHIPTSTLEIQSLFHLVYVGWLTLRADYIAPPIKALS 176
Query: 180 AFCIILFLIQSVDRMILSLGCFWIKYKKIKPLIGE------DLEGSKDGYPMVLVQIPMC 233
FCI+LFLIQSVDR++L LGCFWIKYKKIKP E D EGS YPMVLVQIPMC
Sbjct: 177 KFCIVLFLIQSVDRLVLCLGCFWIKYKKIKPRFDEEPFRNDDAEGSGSEYPMVLVQIPMC 236
Query: 234 NEKEVTVLSYSCV 246
NE+EV S S V
Sbjct: 237 NEREVYEQSISAV 249
>AT2G24630.1 | Symbols: ATCSLC08, CSLC08, ATCSLC8 | Glycosyl
transferase family 2 protein | chr2:10471558-10473984
REVERSE LENGTH=690
Length = 690
Score = 306 bits (784), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/253 (60%), Positives = 186/253 (73%), Gaps = 11/253 (4%)
Query: 1 MAPSFDFSRWWSKDSSRKGNPVVVTMENPNYSVVEIDGPDSAFQPVEKGRGRNAKQFTWV 60
MAP FDFS W+K++ R+G PVVV MENPNYS+VE++ PDSAFQP+EK RG+NAKQ TWV
Sbjct: 1 MAPRFDFSDLWAKET-RRGTPVVVKMENPNYSIVEVEEPDSAFQPMEKSRGKNAKQVTWV 59
Query: 61 LLLKAHRAVGCVAWLGNSLYSLLGNVKKRLILGHGGSAESDKSGKTRFLLGVIVTFLVMA 120
LLLKAH+AVGC+ W+ +SLLG+VK+RL H +E + G+ +L I FLV +
Sbjct: 60 LLLKAHKAVGCLTWVATVFWSLLGSVKRRLSFTHPLGSE--RLGRDGWLFSAIKLFLVAS 117
Query: 121 LAFLTFELVAHFNGWHYFQQHNSLHIPQT-LEIKGWFHTVYVGWLEFRADYIAPIIQSLS 179
LA L FELVA++ GWHYF+ N LHIP + LEI+ H YVGWL RADYIAP I++LS
Sbjct: 118 LAILAFELVAYYRGWHYFKNPN-LHIPTSKLEIQSLLHLFYVGWLSLRADYIAPPIKALS 176
Query: 180 AFCIILFLIQSVDRMILSLGCFWIKYKKIKPLIGE------DLEGSKDGYPMVLVQIPMC 233
FCI+LFL+QSVDR+IL LGC WIK+KKIKP I E D EGS YPMVLVQIPMC
Sbjct: 177 KFCIVLFLVQSVDRLILCLGCLWIKFKKIKPRIDEEHFRNDDFEGSGSEYPMVLVQIPMC 236
Query: 234 NEKEVTVLSYSCV 246
NE+EV S S V
Sbjct: 237 NEREVYEQSISAV 249
>AT4G07960.1 | Symbols: ATCSLC12, CSLC12 | Cellulose-synthase-like
C12 | chr4:4802628-4805114 REVERSE LENGTH=699
Length = 699
Score = 209 bits (532), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/269 (44%), Positives = 166/269 (61%), Gaps = 29/269 (10%)
Query: 1 MAPSFDFSRWWSK---DSSRKGNPVVVTMENPN-YSVVEIDGP---DSAFQPVEKGRGRN 53
MAP F+ WW+K +++RKG PVVV MENPN +S+VE++ P D + EK R +N
Sbjct: 1 MAPKFE---WWAKGNNNNTRKGTPVVVKMENPNNWSMVELESPSHDDFLVRTHEKSRNKN 57
Query: 54 AKQFTWVLLLKAHRAVGCVAWLGNSLYSLLGNVKKRLILGH----------GGSAESDKS 103
A+Q TWVLLLKAHRA GC+ LG++L++L V++R+ G G + + +
Sbjct: 58 ARQLTWVLLLKAHRAAGCLTSLGSALFALGTAVRRRIAAGRTDIEISSSGVGSLQKQNHT 117
Query: 104 GKTRFLLGVIVTFLVMALAFLTFELVAHFNGWHYFQQHNSLHIPQTLEIKGWFHTVYVGW 163
K++ + FL ++L L FE+ A+F GW + L Q + KG+F VY W
Sbjct: 118 KKSKLFYSCLKVFLWLSLILLGFEIAAYFKGWSFGTSKLQL---QFIFNKGFFDWVYTRW 174
Query: 164 LEFRADYIAPIIQSLSAFCIILFLIQSVDRMILSLGCFWIKYKKIKPLIG----EDLEGS 219
+ R +Y+AP +Q L+ CI+LFL+QS+DR+IL LGCFWI++KKIKP+ DLE
Sbjct: 175 VLLRVEYLAPPLQFLANGCIVLFLVQSLDRLILCLGCFWIRFKKIKPVPKPDSISDLESG 234
Query: 220 KDG--YPMVLVQIPMCNEKEVTVLSYSCV 246
+G PMVLVQIPMCNEKEV S + V
Sbjct: 235 DNGAFLPMVLVQIPMCNEKEVYQQSIAAV 263
>AT3G28180.1 | Symbols: ATCSLC04, CSLC04, ATCSLC4, CSLC4 |
Cellulose-synthase-like C4 | chr3:10506110-10509067
FORWARD LENGTH=673
Length = 673
Score = 181 bits (460), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 144/224 (64%), Gaps = 19/224 (8%)
Query: 20 NPVVVTMENP-NYSVVEIDGPDSAFQPVEKGRGRNAKQFTWVLLLKAHRAVGCVAWLGNS 78
N V VTME P N+S++EI+G D + P +K + + KQF+W LLLKAHR + C++WL +S
Sbjct: 4 NSVAVTMEKPDNFSLLEINGSDPSSFP-DKRKSISPKQFSWFLLLKAHRLISCLSWLVSS 62
Query: 79 LYSLLGNVKKRLILGHGG-SAESDKSGKTRFLLGVIVTFLVMALAFLTFELVAHFNGWHY 137
VKKR+ + E D + + + I LV+++ L+ E+VAHF W+
Sbjct: 63 -------VKKRIAFSAKNINEEEDPKSRGKQMYRFIKACLVISIIALSIEIVAHFKKWNL 115
Query: 138 FQQHNSLHIPQTLEIKGWFHTVYVGWLEFRADYIAPIIQSLSAFCIILFLIQSVDRMILS 197
+ ++ P + E+ G Y+ WL FR+DYIAP++ SLS FC +LFLIQS+DR++L
Sbjct: 116 ----DLINRP-SWEVYGLVEWSYMAWLSFRSDYIAPLVISLSRFCTVLFLIQSLDRLVLC 170
Query: 198 LGCFWIKYKKIKPLIGE---DLEGSKDGYPMVLVQIPMCNEKEV 238
LGCFWIK+KKI+P + E DLE +PMVL+QIPMCNE+EV
Sbjct: 171 LGCFWIKFKKIEPKLTEESIDLEDP-SSFPMVLIQIPMCNEREV 213
>AT3G07330.1 | Symbols: ATCSLC06, CSLC06, ATCSLC6, CSLC6 |
Cellulose-synthase-like C6 | chr3:2336121-2338942
REVERSE LENGTH=682
Length = 682
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 130/242 (53%), Gaps = 23/242 (9%)
Query: 6 DFSRWWSKDSSRKGNPVVVTMENPNYSVVEIDGPDSAFQPVEKGRGRNAKQFTWVLLLKA 65
+F +WW+K R + V+ ++ + VEI P + ++ R R +Q + + LLK
Sbjct: 8 EFQQWWNKQRDRNNHDVLYAGDDEAFLTVEIRTPATVDPDKDRIRTRTVRQLSRLYLLKF 67
Query: 66 HRAVGCVAWLGNSLYSLLGNVKKRLILGHGGSAESDKSGKTRFLLGVIVTFLVMALAFLT 125
+ W+GNS L+ +R+ + S S L +I FLV+ + L
Sbjct: 68 KQLASSFLWIGNSFLYLVRTANRRIANDNPPSVSSSAR-----LYRLIKGFLVVVVLLLC 122
Query: 126 FELVAHFNGWHYFQQHNSLHIPQTLEIKGWFHTVYVGWLEFRADYIAPIIQSLSAFCIIL 185
FEL A+F GWH+ P + VY WLE RA Y+AP +QSL+ CI+L
Sbjct: 123 FELAAYFKGWHF-------TPPSVASAEVAVEVVYAWWLEIRASYLAPPLQSLTNVCIVL 175
Query: 186 FLIQSVDRMILSLGCFWIKYKKIKP---------LIGEDLEGSKDGYPMVLVQIPMCNEK 236
FLIQSVDR++L LGCFWIK ++IKP L+GE + + YPMV+VQIPMCNEK
Sbjct: 176 FLIQSVDRLVLVLGCFWIKLRRIKPVASMEYPTKLVGEGVR--LEDYPMVIVQIPMCNEK 233
Query: 237 EV 238
EV
Sbjct: 234 EV 235
>AT1G24070.1 | Symbols: ATCSLA10, CSLA10 | cellulose synthase-like
A10 | chr1:8516437-8519734 REVERSE LENGTH=552
Length = 552
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 9/93 (9%)
Query: 165 EFRADYIAPIIQSLSAFCIILFLIQSVDRMILSLGCFWIKYKKIKP-------LIGEDLE 217
EFR+ +I P+ + L AFC+I+ L+ ++ + ++L ++K + KP + ED+E
Sbjct: 56 EFRSLFIVPLFKCLVAFCLIISLLVFIEGIYMNLVVLYVKVFERKPEKVYRWEAMQEDIE 115
Query: 218 GSKDGYPMVLVQIPMCNEKEVTVLSY--SCVLI 248
+ YPMVLVQIPM NEKEV LS +C LI
Sbjct: 116 LGHETYPMVLVQIPMYNEKEVLQLSIGAACRLI 148
>AT4G13410.1 | Symbols: ATCSLA15, CSLA15 |
Nucleotide-diphospho-sugar transferases superfamily
protein | chr4:7792219-7795824 REVERSE LENGTH=537
Length = 537
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 163 WLEFRADYIAPIIQSLSAFCIILFLIQSVDRMILSLGCFWIKYKKIKP-------LIGED 215
W E R +I P+ + + C+I+ L+ V+ + ++L ++K KP + ED
Sbjct: 43 WRETRNVFIVPLFKCIVVMCLIISLLVFVESVYMNLVVLYVKLFNRKPEKVYKWEAMQED 102
Query: 216 LEGSKDGYPMVLVQIPMCNEKEVTVLS 242
+E YPMVLVQIPM NE+EV LS
Sbjct: 103 MELGHQNYPMVLVQIPMYNEREVFELS 129
>AT1G23480.2 | Symbols: ATCSLA03, CSLA03, ATCSLA3, CSLA3 | cellulose
synthase-like A3 | chr1:8333917-8336230 FORWARD
LENGTH=556
Length = 556
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 163 WLEFRADYIAPIIQSLSAFCIILFLIQSVDRMILSLGCFWIKY--------KKIKPLIGE 214
W + R PI++ L C+++ L+ ++R+ +S+ ++K K +P+ +
Sbjct: 51 WKQTRIFVFIPILKCLVTICLVMSLLLFIERVYMSIVVVFVKLLRRTPEKVHKWEPINDD 110
Query: 215 DLEGSKDGYPMVLVQIPMCNEKEVTVLS 242
DLE + YPMVL+QIPM NEKEV LS
Sbjct: 111 DLELANTNYPMVLIQIPMYNEKEVCQLS 138
>AT1G23480.1 | Symbols: ATCSLA03, CSLA03, ATCSLA3, CSLA3 | cellulose
synthase-like A3 | chr1:8333917-8336230 FORWARD
LENGTH=556
Length = 556
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 163 WLEFRADYIAPIIQSLSAFCIILFLIQSVDRMILSLGCFWIKY--------KKIKPLIGE 214
W + R PI++ L C+++ L+ ++R+ +S+ ++K K +P+ +
Sbjct: 51 WKQTRIFVFIPILKCLVTICLVMSLLLFIERVYMSIVVVFVKLLRRTPEKVHKWEPINDD 110
Query: 215 DLEGSKDGYPMVLVQIPMCNEKEVTVLS 242
DLE + YPMVL+QIPM NEKEV LS
Sbjct: 111 DLELANTNYPMVLIQIPMYNEKEVCQLS 138
>AT2G35650.1 | Symbols: ATCSLA07, CSLA07, ATCSLA7, CSLA7 | cellulose
synthase like | chr2:14985625-14988187 FORWARD
LENGTH=556
Length = 556
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 163 WLEFRADYIAPIIQSLSAFCIILFLIQSVDRMILSLGCFWIKYKKIKP-------LIGED 215
W RA + P+ + L C+++ ++ V+ M + + ++K K KP + +D
Sbjct: 51 WQLIRAVVVVPVFKFLVLLCLVMSVMFFVEVMYMGIVVLYVKLFKRKPEKFYKWEAMEDD 110
Query: 216 LEGSKDGYPMVLVQIPMCNEKEV 238
+E YPMVLVQIPM NEKEV
Sbjct: 111 VECGSASYPMVLVQIPMYNEKEV 133