Miyakogusa Predicted Gene

Lj3g3v2039910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2039910.1 Non Chatacterized Hit- tr|I1KVT4|I1KVT4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,92.26,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.43474.1
         (478 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G16860.1 | Symbols:  | Ubiquitin-specific protease family C19...   698   0.0  
AT1G78880.1 | Symbols:  | Ubiquitin-specific protease family C19...   696   0.0  
AT4G22290.1 | Symbols:  | Ubiquitin-specific protease family C19...   423   e-118

>AT1G16860.1 | Symbols:  | Ubiquitin-specific protease family
           C19-related protein | chr1:5768280-5770183 FORWARD
           LENGTH=474
          Length = 474

 Score =  698 bits (1802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/483 (71%), Positives = 396/483 (81%), Gaps = 14/483 (2%)

Query: 1   MGSRFPSHQLSNGLYVSGRPEQPKERTPTMSSVAMPYTGGDIKKSGELGKMFDIPSDGSK 60
           MGSR+PSHQLSNGL+VSGRPEQPKER PTMS+VAMPYTGGDIK+SGELGKMFDIP+DG+K
Sbjct: 1   MGSRYPSHQLSNGLFVSGRPEQPKERAPTMSAVAMPYTGGDIKRSGELGKMFDIPADGTK 60

Query: 61  SRKSGPLSNAPSRTGSFAGAASHSGPIMQNAAARSAYVTSGNVAAGGMSGSASMKKTNSG 120
           SRKSGP+  APSR+GSFAG A  SGP    A  R     SG++A+   +GS SMKKTNSG
Sbjct: 61  SRKSGPIPGAPSRSGSFAGTA-QSGPGAPMATGR----MSGSLAS---AGSVSMKKTNSG 112

Query: 121 PLNKHGEPIKKSSGPQSGGGTRQNSGPIPPVLPTTGLITSGP-----LNSSGAPRKVSGP 175
           PL+KHGEP+KKSSGPQSGG TRQNSG IP +LP TGLITSGP     LNSSGAPRKVSGP
Sbjct: 113 PLSKHGEPLKKSSGPQSGGVTRQNSGSIP-ILPATGLITSGPITSGPLNSSGAPRKVSGP 171

Query: 176 LETTGSMKSHSSSVAHNPAVTTLSLDDEYSFKRNFPKPILWSVILIFLMGFIAGGFILGA 235
           L+++G MKSH  +V HN AVTTL  +D++S  ++FPKP+LW V+LIF+MGF+AGGFILGA
Sbjct: 172 LDSSGLMKSHMPTVVHNQAVTTLGPEDDFSCLKSFPKPVLWLVVLIFIMGFLAGGFILGA 231

Query: 236 VHNAILPSXXXXXXXXXXXXXTWNSCCGRKAIAGFISQYPDAELRTAKNGQFVKVSGVVT 295
           VHN IL                WN C GR+ I  FI++YPDA+LRTAKNGQ VKV+GVVT
Sbjct: 232 VHNPILLVVVAILFTVVAALFIWNICWGRRGITDFIARYPDADLRTAKNGQHVKVTGVVT 291

Query: 296 CGNVPLESSFHKIPRCVYTSTSLFEYRGWDSKAANPKHRHFTWGLRSTERHVVDFYISDF 355
           CGNVPLESSFH++PRCVYTST L+EYRGW SK AN  HRHFTWGLRS+ERHVVDFYISDF
Sbjct: 292 CGNVPLESSFHRVPRCVYTSTCLYEYRGWGSKPANSSHRHFTWGLRSSERHVVDFYISDF 351

Query: 356 QSGLRALVKTGYGARVTPYVDDSIVIDVNPANKDMSPEFLRWLGDRKLSSDDRIMRLKEG 415
           QSGLRALVKTG GA+VTP VDDS+VID    ++ +SP+F+RWLG + L+SDDRIMRLKEG
Sbjct: 352 QSGLRALVKTGSGAKVTPLVDDSVVIDFKQGSEQVSPDFVRWLGKKNLTSDDRIMRLKEG 411

Query: 416 YIKEGSTVSVMGVVQRNDNVLMIVPPPEPLTTGCQWAKCIFPASLEGIVLRCEDTSKVDV 475
           YIKEGSTVSV+GVVQRNDNVLMIVP  EPL  G QW +C FP SLEGIVLRCED+S VD 
Sbjct: 412 YIKEGSTVSVIGVVQRNDNVLMIVPSSEPLAAGWQWRRCTFPTSLEGIVLRCEDSSNVDA 471

Query: 476 IPV 478
           IPV
Sbjct: 472 IPV 474


>AT1G78880.1 | Symbols:  | Ubiquitin-specific protease family
           C19-related protein | chr1:29653068-29654819 REVERSE
           LENGTH=468
          Length = 468

 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/483 (71%), Positives = 396/483 (81%), Gaps = 20/483 (4%)

Query: 1   MGSRFPSHQLSNGLYVSGRPEQPKERTPTMSSVAMPYTGGDIKKSGELGKMFDIPSDGSK 60
           MGSR+ SHQLSNGL+VSGRPEQPKE+ PTMSSVAMPYTGGDIKKSGELGKMFDIP+DG+K
Sbjct: 1   MGSRYASHQLSNGLFVSGRPEQPKEKPPTMSSVAMPYTGGDIKKSGELGKMFDIPTDGTK 60

Query: 61  SRKSGPLSNAPSRTGSFAGAASHSGPIMQNAAARSAYVTSGNVAAGGMSGSASMKKTNSG 120
           SRKSGP++   SR+G+       SGP+  NA  R     SGN+A+   +GS SMKKTNSG
Sbjct: 61  SRKSGPITGGSSRSGA------QSGPV-PNATGR----MSGNLAS---AGSNSMKKTNSG 106

Query: 121 PLNKHGEPIKKSSGPQSGGGTRQNSGPIPPVLPTTGLITSGP-----LNSSGAPRKVSGP 175
           PL+KHGEP+KKSSGPQSGG TRQNSGPIP +LPTTGLITSGP     LNSSGAPRK+SGP
Sbjct: 107 PLSKHGEPLKKSSGPQSGGVTRQNSGPIP-ILPTTGLITSGPITSGPLNSSGAPRKISGP 165

Query: 176 LETTGSMKSHSSSVAHNPAVTTLSLDDEYSFKRNFPKPILWSVILIFLMGFIAGGFILGA 235
           L+ +GSMK+H  SV HN AVTTL+ +D++S  ++FPKP+LW VILIF+MGF+AGGFILGA
Sbjct: 166 LDYSGSMKTHMPSVVHNQAVTTLAPEDDFSCMKSFPKPVLWLVILIFVMGFLAGGFILGA 225

Query: 236 VHNAILPSXXXXXXXXXXXXXTWNSCCGRKAIAGFISQYPDAELRTAKNGQFVKVSGVVT 295
           VHNAIL                WN  C R+ I  FI++YPDA+LRTAKNGQ+VKV+GVVT
Sbjct: 226 VHNAILLIVVAVLFTVVAALFIWNISCERRGITDFIARYPDADLRTAKNGQYVKVTGVVT 285

Query: 296 CGNVPLESSFHKIPRCVYTSTSLFEYRGWDSKAANPKHRHFTWGLRSTERHVVDFYISDF 355
           CGNVPLESSFH++PRCVYTST L+EYRGW SK AN  HR FTWGLRS ERHVVDFYISDF
Sbjct: 286 CGNVPLESSFHRVPRCVYTSTCLYEYRGWGSKPANASHRRFTWGLRSAERHVVDFYISDF 345

Query: 356 QSGLRALVKTGYGARVTPYVDDSIVIDVNPANKDMSPEFLRWLGDRKLSSDDRIMRLKEG 415
           QSGLRALVKTG GA+VTP VDDS+VID  P N+  SP+F+RWLG + L++DDRIMRLKEG
Sbjct: 346 QSGLRALVKTGNGAKVTPLVDDSVVIDFKPGNEQASPDFVRWLGKKNLTNDDRIMRLKEG 405

Query: 416 YIKEGSTVSVMGVVQRNDNVLMIVPPPEPLTTGCQWAKCIFPASLEGIVLRCEDTSKVDV 475
           YIKEGSTVSV+GVVQRNDNVLMIVP  EPL  G QW+KC FPASLEGIVLRCED+S VD 
Sbjct: 406 YIKEGSTVSVIGVVQRNDNVLMIVPTTEPLAAGWQWSKCTFPASLEGIVLRCEDSSNVDA 465

Query: 476 IPV 478
           IPV
Sbjct: 466 IPV 468


>AT4G22290.1 | Symbols:  | Ubiquitin-specific protease family
           C19-related protein | chr4:11783199-11785730 REVERSE
           LENGTH=445
          Length = 445

 Score =  423 bits (1088), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/482 (48%), Positives = 310/482 (64%), Gaps = 41/482 (8%)

Query: 1   MGSRFPSHQLSNGLYVSGRPEQPKERTPTMSSVAMPYTGGDIKKSGELGKMFDIPSDGSK 60
           M  R  SHQL NGLYVSG+ EQPKER PTM++ A+PYTGGDIKKSGELG+MFDI      
Sbjct: 1   MAGRIQSHQLPNGLYVSGKLEQPKERPPTMAARAVPYTGGDIKKSGELGRMFDI------ 54

Query: 61  SRKSGPLSNAPSRTGSFAGAASHSGPIMQNAAARSAYVTSGNVAAGGMSGSASMKKTNSG 120
                          S   +AS  GP           +  GN ++GG S   +  + +  
Sbjct: 55  ---------------SVVDSASFQGP--------PPLIVGGN-SSGGTSRLQAPPRVSGS 90

Query: 121 PLNKHGEPIKKSSGPQSGGGTRQNSGPIPPVLPTTGLITSGPLNSSG---APRKVSGPLE 177
             N +   ++  SGP SG   ++ SGP+  + PT GLITSG L SSG   +  + SG L+
Sbjct: 91  SSNPNSGSVR--SGPNSGS-VKKFSGPLSQLQPT-GLITSGSLGSSGPILSGSRRSGQLD 146

Query: 178 TTGSMKSHSSSVAHNPAVTTLSLDD-EYSFKRNFPKPILWSVILIFLMGFIAGGFILGAV 236
              S  + SS   +  +VT+L++D     FK   PK ++W+V+++  MG + G F+  AV
Sbjct: 147 HQLSNLA-SSKPKYGSSVTSLNVDPVRVGFK--VPKAMVWAVLIVAAMGLLVGAFLTVAV 203

Query: 237 HNAILPSXXXXXXXXXXXXXTWNSCCGRKAIAGFISQYPDAELRTAKNGQFVKVSGVVTC 296
              ++ +              WN    RK +  FI +YPDAELR A +GQFVKV+GVVTC
Sbjct: 204 KKPVVIAAVLAAVCPAIVVLVWNCVWRRKGLLSFIKKYPDAELRGAIDGQFVKVTGVVTC 263

Query: 297 GNVPLESSFHKIPRCVYTSTSLFEYRGWDSKAANPKHRHFTWGLRSTERHVVDFYISDFQ 356
           G++PLESSF + PRCVY ST L+EY+G+  K+ANPKHR F+WG R  E++V DFYISDFQ
Sbjct: 264 GSIPLESSFQRTPRCVYVSTELYEYKGFGGKSANPKHRCFSWGSRHAEKYVSDFYISDFQ 323

Query: 357 SGLRALVKTGYGARVTPYVDDSIVIDVNPANKDMSPEFLRWLGDRKLSSDDRIMRLKEGY 416
           SGLRALVK GYG++V+P+V  + V +V   NKD+SP FL+WL DR LS+DDR+MRLKEGY
Sbjct: 324 SGLRALVKAGYGSKVSPFVKPATVANVTTQNKDLSPSFLKWLSDRNLSADDRVMRLKEGY 383

Query: 417 IKEGSTVSVMGVVQRNDNVLMIVPPPEPLTTGCQWAKCIFPASLEGIVLRCEDTSKVDVI 476
           IKEGSTVSVMG+V+R+DNVLMIVPP E +++GC+W  C+FP   +G+++ C+D    DVI
Sbjct: 384 IKEGSTVSVMGMVRRHDNVLMIVPPAEAVSSGCRWWHCLFPTYADGLIITCDDNQNADVI 443

Query: 477 PV 478
           PV
Sbjct: 444 PV 445