Miyakogusa Predicted Gene

Lj3g3v2039890.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2039890.1 Non Chatacterized Hit- tr|B9RHV1|B9RHV1_RICCO
7-dehydrocholesterol reductase, putative OS=Ricinus
co,83.87,0,ERG4_ERG24,Ergosterol biosynthesis ERG4/ERG24; SUBFAMILY
NOT NAMED,NULL; STEROL REDUCTASE/LAMIN B RE,CUFF.43478.1
         (341 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G50430.1 | Symbols: DWF5, PA, LE, ST7R, 7RED | Ergosterol bio...   585   e-167
AT1G50430.2 | Symbols: DWF5, PA, LE, ST7R, 7RED | Ergosterol bio...   577   e-165
AT3G52940.1 | Symbols: FK, HYD2, ELL1 | Ergosterol biosynthesis ...   102   6e-22
AT3G52940.2 | Symbols: FK, HYD2, ELL1 | Ergosterol biosynthesis ...    88   7e-18

>AT1G50430.1 | Symbols: DWF5, PA, LE, ST7R, 7RED | Ergosterol
           biosynthesis ERG4/ERG24 family | chr1:18682175-18685555
           REVERSE LENGTH=432
          Length = 432

 Score =  585 bits (1508), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 279/335 (83%), Positives = 301/335 (89%), Gaps = 1/335 (0%)

Query: 7   SEIVHSPLVTYASMISLLTLCPPFVILLWYTMTLADGSILQTFNNLNQTGVKTFFLHSWP 66
           +E VHSP+VTYASM+SLL  CPPFVILLWYTM   DGS+ QTF    + GV+   ++ WP
Sbjct: 2   AETVHSPIVTYASMLSLLAFCPPFVILLWYTMVHQDGSVTQTFGFFWENGVQGL-INIWP 60

Query: 67  KPSATAYKIIAVYAAFEAALQLLLPGKTVHGPVSPAGNVPVYKANGVAAYLVTLITYLGL 126
           +P+  A+KII  Y AFEA LQLLLPGK V GP+SPAGN PVYKANG+AAY VTL TYLGL
Sbjct: 61  RPTLIAWKIIFCYGAFEAILQLLLPGKRVEGPISPAGNRPVYKANGLAAYFVTLATYLGL 120

Query: 127 WWFGIFNPTIVYDHLGEIFSALIFGSLVFCVLLYIKGHLAPSSTDSGSSGNIIIDFYWGM 186
           WWFGIFNP IVYDHLGEIFSALIFGS +FCVLLYIKGH+APSS+DSGS GN+IIDFYWGM
Sbjct: 121 WWFGIFNPAIVYDHLGEIFSALIFGSFIFCVLLYIKGHVAPSSSDSGSCGNLIIDFYWGM 180

Query: 187 ELYPRIGKYFDIKVFTNCRFGMMSWAVLALTYCIKQYEENGKVADSMLVNTTLMLVYVTK 246
           ELYPRIGK FDIKVFTNCRFGMMSWAVLA+TYCIKQYE NGKV+DSMLVNT LMLVYVTK
Sbjct: 181 ELYPRIGKSFDIKVFTNCRFGMMSWAVLAVTYCIKQYEINGKVSDSMLVNTILMLVYVTK 240

Query: 247 FFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVNLGTQLALFILVA 306
           FFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPV LGTQLA++ILVA
Sbjct: 241 FFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVELGTQLAIYILVA 300

Query: 307 GILCIYINYDCDRQRQEFRRTNGKCLVWGKAPSKI 341
           GILCIYINYDCDRQRQEFRRTNGKCLVWG+APSKI
Sbjct: 301 GILCIYINYDCDRQRQEFRRTNGKCLVWGRAPSKI 335


>AT1G50430.2 | Symbols: DWF5, PA, LE, ST7R, 7RED | Ergosterol
           biosynthesis ERG4/ERG24 family | chr1:18682175-18685555
           REVERSE LENGTH=431
          Length = 431

 Score =  577 bits (1488), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 278/335 (82%), Positives = 300/335 (89%), Gaps = 2/335 (0%)

Query: 7   SEIVHSPLVTYASMISLLTLCPPFVILLWYTMTLADGSILQTFNNLNQTGVKTFFLHSWP 66
           +E VHSP+VTYASM+SLL  CPPFVILLWYTM   DGS+ QTF    + GV+   ++ WP
Sbjct: 2   AETVHSPIVTYASMLSLLAFCPPFVILLWYTMVHQDGSVTQTFGFFWENGVQGL-INIWP 60

Query: 67  KPSATAYKIIAVYAAFEAALQLLLPGKTVHGPVSPAGNVPVYKANGVAAYLVTLITYLGL 126
           +P+  A+KII  Y AFEA LQLLLPGK V GP+SPAGN PVYKANG+AAY VTL TYLGL
Sbjct: 61  RPTLIAWKIIFCYGAFEAILQLLLPGKRVEGPISPAGNRPVYKANGLAAYFVTLATYLGL 120

Query: 127 WWFGIFNPTIVYDHLGEIFSALIFGSLVFCVLLYIKGHLAPSSTDSGSSGNIIIDFYWGM 186
           W FGIFNP IVYDHLGEIFSALIFGS +FCVLLYIKGH+APSS+DSGS GN+IIDFYWGM
Sbjct: 121 W-FGIFNPAIVYDHLGEIFSALIFGSFIFCVLLYIKGHVAPSSSDSGSCGNLIIDFYWGM 179

Query: 187 ELYPRIGKYFDIKVFTNCRFGMMSWAVLALTYCIKQYEENGKVADSMLVNTTLMLVYVTK 246
           ELYPRIGK FDIKVFTNCRFGMMSWAVLA+TYCIKQYE NGKV+DSMLVNT LMLVYVTK
Sbjct: 180 ELYPRIGKSFDIKVFTNCRFGMMSWAVLAVTYCIKQYEINGKVSDSMLVNTILMLVYVTK 239

Query: 247 FFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVNLGTQLALFILVA 306
           FFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPV LGTQLA++ILVA
Sbjct: 240 FFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVELGTQLAIYILVA 299

Query: 307 GILCIYINYDCDRQRQEFRRTNGKCLVWGKAPSKI 341
           GILCIYINYDCDRQRQEFRRTNGKCLVWG+APSKI
Sbjct: 300 GILCIYINYDCDRQRQEFRRTNGKCLVWGRAPSKI 334


>AT3G52940.1 | Symbols: FK, HYD2, ELL1 | Ergosterol biosynthesis
           ERG4/ERG24 family | chr3:19630369-19633112 REVERSE
           LENGTH=369
          Length = 369

 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 143/281 (50%), Gaps = 21/281 (7%)

Query: 68  PSATAYKIIAVYAAFEAALQLLLPGKTVHGPVSPAGNVPVYKANGVAAYLVTLITYLGLW 127
           PS  +  ++  Y  + A    +LPGK + G +   G+   Y+ NG+ A ++ +       
Sbjct: 12  PSLQSVYVLVFYFVYLAVAGEILPGKVIRGVLLSDGSQLRYRCNGLLALILLVAILGICA 71

Query: 128 WFGIFNPTIVYDHLGEIFSALIFGSLVFCVL----LYIKGHLAPSSTDSGSS------GN 177
             GI +P +V D   E+ SA    + +FCVL    LY+ G    SS++ GSS      GN
Sbjct: 72  KLGIVSPLVVADRGLELLSA----TFIFCVLVTLALYVTGR---SSSNKGSSLKPHVSGN 124

Query: 178 IIIDFYWGMELYPRIGKYFDIKVFTNCRFGMMSWAVLALTYCIKQYEENGKVADSMLVNT 237
           ++ D+++G++L P+     D+K F   R GMM W ++ L+   K  ++ G ++ SM++  
Sbjct: 125 LVHDWWFGIQLNPQFMS-IDLKFFF-VRAGMMGWLLINLSILAKSVQD-GSLSQSMILYQ 181

Query: 238 TLMLVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVNLGT 297
               +Y+  +F  E    +T DI  +R GF + +G L+W+P  ++  G +L+++ V L T
Sbjct: 182 IFCALYILDYFVHEEYMTSTWDIIAERLGFMLVFGDLLWIPFTFSIQGWWLLHNKVEL-T 240

Query: 298 QLALFILVAGILCIYINYDCDRQRQEFRRTNGKCLVWGKAP 338
             A+ +     L  Y+ +    +++   + N K  +WGK P
Sbjct: 241 VPAIVVNCLVFLIGYMVFRGANKQKHIFKKNPKTPIWGKPP 281


>AT3G52940.2 | Symbols: FK, HYD2, ELL1 | Ergosterol biosynthesis
           ERG4/ERG24 family | chr3:19631030-19633112 REVERSE
           LENGTH=262
          Length = 262

 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 20/225 (8%)

Query: 68  PSATAYKIIAVYAAFEAALQLLLPGKTVHGPVSPAGNVPVYKANGVAAYLVTLITYLGLW 127
           PS  +  ++  Y  + A    +LPGK + G +   G+   Y+ NG+ A ++ +       
Sbjct: 12  PSLQSVYVLVFYFVYLAVAGEILPGKVIRGVLLSDGSQLRYRCNGLLALILLVAILGICA 71

Query: 128 WFGIFNPTIVYDHLGEIFSALIFGSLVFCVL----LYIKGHLAPSSTDSGSS------GN 177
             GI +P +V D   E+ SA    + +FCVL    LY+ G    SS++ GSS      GN
Sbjct: 72  KLGIVSPLVVADRGLELLSA----TFIFCVLVTLALYVTGR---SSSNKGSSLKPHVSGN 124

Query: 178 IIIDFYWGMELYPRIGKYFDIKVFTNCRFGMMSWAVLALTYCIKQYEENGKVADSMLVNT 237
           ++ D+++G++L P+     D+K F   R GMM W ++ L+   K  ++ G ++ SM++  
Sbjct: 125 LVHDWWFGIQLNPQFMS-IDLKFFF-VRAGMMGWLLINLSILAKSVQD-GSLSQSMILYQ 181

Query: 238 TLMLVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYT 282
               +Y+  +F  E    +T DI  +R GF + +G L+W+P  ++
Sbjct: 182 IFCALYILDYFVHEEYMTSTWDIIAERLGFMLVFGDLLWIPFTFS 226