Miyakogusa Predicted Gene

Lj3g3v2003920.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2003920.2 tr|D6WQ23|D6WQ23_TRICA Eyes absent OS=Tribolium
castaneum GN=clift PE=4 SV=1,32.93,2e-17,EYES ABSENT,NULL;
EYA-cons_domain: EYA conserved domain,EYA,CUFF.43517.2
         (176 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G35320.1 | Symbols: ATEYA, EYA | EYES ABSENT homolog | chr2:1...   219   5e-58

>AT2G35320.1 | Symbols: ATEYA, EYA | EYES ABSENT homolog |
           chr2:14867074-14868387 REVERSE LENGTH=307
          Length = 307

 Score =  219 bits (559), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 98/155 (63%), Positives = 130/155 (83%)

Query: 20  LDVFVWDMDETLVLLNSLLKSSYAEAFNGLKDVQKGVELGRMWENLILQLCDDYFFYEQI 79
           ++V+VWDMDETL+LL SLL  +YAE+FNG KDV++GVE+GRMWE  IL++CDD+FFYEQ+
Sbjct: 19  VNVYVWDMDETLILLRSLLNGTYAESFNGSKDVKRGVEIGRMWEKHILKICDDFFFYEQV 78

Query: 80  EDYNKPFLDALTQFDDGRDLSDYDFNQDELGAPNDDDNKRKLAYRHRIIAQKYVQGLHNI 139
           E+ N+PFLD+L Q+DDG+DLS Y+F QD+   P DD NKRKLAYRHR +A++Y +GL   
Sbjct: 79  EECNEPFLDSLRQYDDGKDLSRYEFKQDDFSTPTDDLNKRKLAYRHRAVAERYEKGLCPF 138

Query: 140 LDHEAIKFWNELYDKTDEYTDKWLSSARAFLKECS 174
           +D E++   +ELY+ TDEYTD+WLSSARAFL++CS
Sbjct: 139 IDSESMSGLDELYNVTDEYTDRWLSSARAFLEQCS 173