Miyakogusa Predicted Gene

Lj3g3v1957930.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1957930.1 tr|C1E3L6|C1E3L6_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_99974
,39.02,0.0000002,Thioredoxin-like,Thioredoxin-like fold; no
description,Thioredoxin-like fold; GLUTAREDOXIN_1,Glutare,CUFF.43432.1
         (229 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10000.2 | Symbols:  | Thioredoxin family protein | chr4:6260...   337   4e-93
AT4G10000.1 | Symbols:  | Thioredoxin family protein | chr4:6260...   337   4e-93
AT5G03880.1 | Symbols:  | Thioredoxin family protein | chr5:1038...   167   5e-42

>AT4G10000.2 | Symbols:  | Thioredoxin family protein |
           chr4:6260707-6263053 REVERSE LENGTH=333
          Length = 333

 Score =  337 bits (864), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 155/227 (68%), Positives = 187/227 (82%)

Query: 1   MSRFAWGRKSIAESSPNNEIPSNLPINLQLFEFEACPFCRRVREALTELDLSVEVYPCPK 60
           ++R  WG +    S  N ++ SN P+ LQLFEFEACPFCRRVREA+TELDLSVEVYPCPK
Sbjct: 104 VARLPWGSRVSTGSIDNQDVSSNPPLRLQLFEFEACPFCRRVREAMTELDLSVEVYPCPK 163

Query: 61  GSVRHREVVRRTGGKEQFPFLIDKKSGISIYESGDIVKYLFEQYGEGRSPSFGLLESTVF 120
           GS+RHRE+VRR+GGKE FPFL+D  +   +YESGDIVKYLF+QYG GR PS GLLEST+F
Sbjct: 164 GSIRHRELVRRSGGKEMFPFLVDPNTETLMYESGDIVKYLFKQYGNGRGPSTGLLESTLF 223

Query: 121 TGWMPTILRAGRGMTLWEHSTPDPPPGKLELFSYENNPNARIVREALCELELPYILQNVG 180
           TGWMPT+LRAGRGM+LW+ ++ D PP  LELFSYENNP +R+VREALCELELPY+L N+G
Sbjct: 224 TGWMPTLLRAGRGMSLWDKASTDLPPKMLELFSYENNPYSRLVREALCELELPYVLHNIG 283

Query: 181 EGSHRMKLLLDAYGSKEVPYFIDHSTGFQSGDYKVILSYLFDTYSTV 227
           EGS RMK LL+A GS +VP+ +D +TG Q GDY+ IL+YLF TYS+ 
Sbjct: 284 EGSTRMKSLLNASGSNKVPFLVDPNTGVQLGDYEKILAYLFKTYSSA 330


>AT4G10000.1 | Symbols:  | Thioredoxin family protein |
           chr4:6260707-6263053 REVERSE LENGTH=333
          Length = 333

 Score =  337 bits (864), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 155/227 (68%), Positives = 187/227 (82%)

Query: 1   MSRFAWGRKSIAESSPNNEIPSNLPINLQLFEFEACPFCRRVREALTELDLSVEVYPCPK 60
           ++R  WG +    S  N ++ SN P+ LQLFEFEACPFCRRVREA+TELDLSVEVYPCPK
Sbjct: 104 VARLPWGSRVSTGSIDNQDVSSNPPLRLQLFEFEACPFCRRVREAMTELDLSVEVYPCPK 163

Query: 61  GSVRHREVVRRTGGKEQFPFLIDKKSGISIYESGDIVKYLFEQYGEGRSPSFGLLESTVF 120
           GS+RHRE+VRR+GGKE FPFL+D  +   +YESGDIVKYLF+QYG GR PS GLLEST+F
Sbjct: 164 GSIRHRELVRRSGGKEMFPFLVDPNTETLMYESGDIVKYLFKQYGNGRGPSTGLLESTLF 223

Query: 121 TGWMPTILRAGRGMTLWEHSTPDPPPGKLELFSYENNPNARIVREALCELELPYILQNVG 180
           TGWMPT+LRAGRGM+LW+ ++ D PP  LELFSYENNP +R+VREALCELELPY+L N+G
Sbjct: 224 TGWMPTLLRAGRGMSLWDKASTDLPPKMLELFSYENNPYSRLVREALCELELPYVLHNIG 283

Query: 181 EGSHRMKLLLDAYGSKEVPYFIDHSTGFQSGDYKVILSYLFDTYSTV 227
           EGS RMK LL+A GS +VP+ +D +TG Q GDY+ IL+YLF TYS+ 
Sbjct: 284 EGSTRMKSLLNASGSNKVPFLVDPNTGVQLGDYEKILAYLFKTYSSA 330


>AT5G03880.1 | Symbols:  | Thioredoxin family protein |
           chr5:1038674-1041453 REVERSE LENGTH=339
          Length = 339

 Score =  167 bits (423), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 89/219 (40%), Positives = 130/219 (59%), Gaps = 10/219 (4%)

Query: 9   KSIAESSPNNEIPSNLPINLQLFEFEACPFCRRVREALTELDLSVEVYPCPKGSVRHREV 68
           K  A+  P  E P      ++++EFE CPFCR+VRE +  LDL +  YPCP+GS   R  
Sbjct: 130 KETAKVGPRPEKP------IEIYEFEGCPFCRKVREMVAVLDLDILYYPCPRGSPNFRPK 183

Query: 69  VRRTGGKEQFPFLIDKKSGISIYESGDIVKYLFEQYGEGRSP-SFGLLESTVFTGWMPTI 127
           V++ GGK+QFP+++D  +G+S+YES  I+KYL E+YG+G  P S  L   T  T     I
Sbjct: 184 VKQMGGKQQFPYMVDPNTGVSMYESDGIIKYLSEKYGDGTVPLSLSLGALTAITAGFAMI 243

Query: 128 LRAGRGMTLWEHSTPDPPPGKLELFSYENNPNARIVREALCELELPYILQNVGEGSHRMK 187
            R G+G     ++    PP  LE ++YE +P  ++VRE L ELELP+I ++   GS + +
Sbjct: 244 GRMGKGNL---YTPAKLPPKPLEFWAYEGSPFCKLVREVLVELELPHIQRSCARGSPKRQ 300

Query: 188 LLLDAYGSKEVPYFIDHSTGFQSGDYKVILSYLFDTYST 226
           +LL+  G  +VPY  D +TG    +   I+ YL  TY+ 
Sbjct: 301 VLLEKAGHFQVPYLEDPNTGVAMFESAEIVEYLKQTYAA 339