Miyakogusa Predicted Gene

Lj3g3v1957750.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1957750.1 tr|G7K8G8|G7K8G8_MEDTR HEAT repeat-containing
protein OS=Medicago truncatula GN=MTR_5g092370 PE=4
SV,67.96,0,seg,NULL; U3snoRNP10,U3 small nucleolar RNA-associated
protein 10; SUBFAMILY NOT NAMED,NULL; BAP28,N,CUFF.43382.1
         (800 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G06530.1 | Symbols:  | ARM repeat superfamily protein | chr3:...   346   3e-95
AT3G06530.3 | Symbols:  | ARM repeat superfamily protein | chr3:...   341   1e-93
AT3G06530.2 | Symbols:  | ARM repeat superfamily protein | chr3:...   341   2e-93

>AT3G06530.1 | Symbols:  | ARM repeat superfamily protein |
           chr3:2022596-2033637 FORWARD LENGTH=2197
          Length = 2197

 Score =  346 bits (888), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 193/424 (45%), Positives = 271/424 (63%), Gaps = 9/424 (2%)

Query: 1   MIIGLLGNKAVLAPKLLNSLIRSVAEVAREEAKELMDLHWFRLSLIALINLIQSQNVEIL 60
           M++G+L N+AVL   L+  L+RS+ ++ RE AKE  D H  RLSL+ALIN +Q Q+V+++
Sbjct: 259 MVVGMLANRAVLNTNLIKRLMRSIIDIGREHAKESSDPHSLRLSLMALINFVQLQSVDLI 318

Query: 61  PMKALEILKDIRDLAGVLLELSKAFNIKKFLVVXXXXXXXXXXXXXXXQRALQSLIEKVP 120
           P KAL++  +IRD++GVLL LSK FNIK+FL V                  L S+IE VP
Sbjct: 319 PRKALDLFNEIRDISGVLLGLSKEFNIKRFLAVLLDSLLFYSSSDDKCCEVLASIIETVP 378

Query: 121 LHDSVYHIVTKILSTCVKLSQKVGDSTSLTSAGWAKKILIIVNTKYPSELRGAVPHFLQD 180
           + + V H+++K+ S C+   QK  D  S TS  WAKK L++V+ KYP+ELR AVP FL+ 
Sbjct: 379 VSNLVDHLISKVFSLCMTQYQKNSDFRSSTSGSWAKKFLVVVSKKYPAELRAAVPKFLEA 438

Query: 181 NKTHSKKDDSLYKILCKMLDGNLDSSFDISESRVWFALYHPKADVRRATLLDINSSGILK 240
            +  SKK+D   ++L  MLDGN D S    +S++WF L+HP+A VR A L  +N  G+LK
Sbjct: 439 TEVQSKKEDLKLEMLSCMLDGNSDMSHPFVDSKLWFRLHHPRAAVRCAALSSLN--GVLK 496

Query: 241 SKEVVSESLVDIQEAILRQLDDKDLTVVQAALNVDGLPNIIGSYKLLEALQNVLKRCIGK 300
                +E+LV IQ+AILRQL D DL VVQAAL+ D LPNII S  LL+AL +V+KRC+G 
Sbjct: 497 DDSSKAENLVTIQDAILRQLWDDDLAVVQAALSFDKLPNIITSSGLLDALLHVVKRCVGI 556

Query: 301 LLSGSADNVNLTADVAVTCLKNAISYFHDHTDSLKKAAAMIFPCLLVIPQTQGLNLKALA 360
           L+SG + NV L  DV    LK A+S F + TDS +K  + +FP LL+ P+T  LNL  L 
Sbjct: 557 LVSGVSHNVQLAVDVVALSLKIAVSSFGNQTDSTEKVTSAMFPFLLIQPKTWNLNLLVLK 616

Query: 361 LVNKMNWPLYQNIA----MSTSGEVASIPGSLSSINLKTINNMAENFMVHSEDHVAWFVE 416
           L   +NWPL++N+A    M    ++ S   +LSSI++  IN++ E   +  ++     +E
Sbjct: 617 LGKDVNWPLFKNLAADDGMKKLPDIMST--NLSSISMDIINDLGEALSLDPDERRIELIE 674

Query: 417 -SCN 419
            +CN
Sbjct: 675 RACN 678



 Score =  259 bits (662), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 144/408 (35%), Positives = 221/408 (54%), Gaps = 27/408 (6%)

Query: 384  IPGSLSSINLKTINNMAENFMVHSEDHVAWFVESCNDXXXXXXXXXXXXXXXXXIKPKGD 443
            I  S+S++N+  IN + E FM+H  D++ W   SC D                       
Sbjct: 707  IRESVSALNIDVINKLVEAFMMHPADYIQWLTVSCRDSTLSKTLFYMILMHSLQKMNSSS 766

Query: 444  DFSTL---FESVYPILKAEWESLMSAGDVLLDEF---NCDNIDWDCSAFFDHLSYANLRP 497
            D S L   FE  +P+LK EWE L    DV L E    NC  +       +  L  ++   
Sbjct: 767  DPSQLLDLFELCFPVLKTEWEELEVEVDVSLKELSKSNCQEL------LYQLLDTSDFTA 820

Query: 498  LNAKVMVCIFWRLLAALISALPSDILQDDDAKWVSKIKDLFVFFASSQFKHVFREHLHFL 557
            LN+KV++C+FW+L  + I   P+      + +  S ++DLF FFA+++ +HVF+EHLHF 
Sbjct: 821  LNSKVLICLFWKLGESFIKLEPAHDASVLNKRLSSGLEDLFFFFATTRLRHVFKEHLHFR 880

Query: 558  AAQCRISPPRLLSKFFTEEGVPAAVQVESLQCYAFLCSLSQDRWQTELLAEFSSVLVPLA 617
              + ++ P   LS+  + E VP  VQ+ESL+C+++LCS   + W  ++ + F  +LVP++
Sbjct: 881  VREAKVCPVLFLSRLISREDVPPLVQIESLRCFSYLCSSGNNEWLIQVFSSFPVLLVPMS 940

Query: 618  GDNQAIRVAAMNCIDELHALWCRIERSGKKNGNNATWFHFLGELLWLLNEQKTLILSDKK 677
             DNQ ++ AA+NCI+ L  L   I  S               ELL ++ +Q+ LILSD K
Sbjct: 941  SDNQDVKAAAINCIEALFNLRAAIYGSS------------FDELLGMIVQQRRLILSDNK 988

Query: 678  FLPLLFASTLSSSCHNILVPQNIENRFDQPTKQRIIDFILGSALKFSNYGKLMILTLLKE 737
            F      S LSS+ +++LVP  ++ RFDQ TK+ I+  IL  A     YGKL +L+LLK+
Sbjct: 989  FFASYLTSLLSSTTNDLLVPVGLQKRFDQSTKENILSVILLCAEDLPAYGKLRVLSLLKD 1048

Query: 738  IGNAIFHAKVEPLLSHFM---KQYFDKRDKSCQKISNIETQIMCLLLE 782
            +G  +   ++  LLS  +    QY+ K DK+ Q +S+ E  ++CLLLE
Sbjct: 1049 LGIMLMRDEIVKLLSQLLDKRSQYYYKLDKTSQPLSDTEVDLLCLLLE 1096


>AT3G06530.3 | Symbols:  | ARM repeat superfamily protein |
           chr3:2022596-2033637 FORWARD LENGTH=2188
          Length = 2188

 Score =  341 bits (875), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 193/426 (45%), Positives = 271/426 (63%), Gaps = 11/426 (2%)

Query: 1   MIIGLLGNKAVLAPKLLNSLIRSVAEVAREEAKELMDLHWFRLSLIALINLIQSQNVEIL 60
           M++G+L N+AVL   L+  L+RS+ ++ RE AKE  D H  RLSL+ALIN +Q Q+V+++
Sbjct: 259 MVVGMLANRAVLNTNLIKRLMRSIIDIGREHAKESSDPHSLRLSLMALINFVQLQSVDLI 318

Query: 61  PMKALEILKDIRDLAGVLLELSKAFNIKKFLVVXXXXXXXXXXXXXXXQRALQSLIEKVP 120
           P KAL++  +IRD++GVLL LSK FNIK+FL V                  L S+IE VP
Sbjct: 319 PRKALDLFNEIRDISGVLLGLSKEFNIKRFLAVLLDSLLFYSSSDDKCCEVLASIIETVP 378

Query: 121 LHDSVYHIVTKILSTCVKLSQKVGDSTSLTS--AGWAKKILIIVNTKYPSELRGAVPHFL 178
           + + V H+++K+ S C+   QK  D  S TS    WAKK L++V+ KYP+ELR AVP FL
Sbjct: 379 VSNLVDHLISKVFSLCMTQYQKNSDFRSSTSVVGSWAKKFLVVVSKKYPAELRAAVPKFL 438

Query: 179 QDNKTHSKKDDSLYKILCKMLDGNLDSSFDISESRVWFALYHPKADVRRATLLDINSSGI 238
           +  +  SKK+D   ++L  MLDGN D S    +S++WF L+HP+A VR A L  +N  G+
Sbjct: 439 EATEVQSKKEDLKLEMLSCMLDGNSDMSHPFVDSKLWFRLHHPRAAVRCAALSSLN--GV 496

Query: 239 LKSKEVVSESLVDIQEAILRQLDDKDLTVVQAALNVDGLPNIIGSYKLLEALQNVLKRCI 298
           LK     +E+LV IQ+AILRQL D DL VVQAAL+ D LPNII S  LL+AL +V+KRC+
Sbjct: 497 LKDDSSKAENLVTIQDAILRQLWDDDLAVVQAALSFDKLPNIITSSGLLDALLHVVKRCV 556

Query: 299 GKLLSGSADNVNLTADVAVTCLKNAISYFHDHTDSLKKAAAMIFPCLLVIPQTQGLNLKA 358
           G L+SG + NV L  DV    LK A+S F + TDS +K  + +FP LL+ P+T  LNL  
Sbjct: 557 GILVSGVSHNVQLAVDVVALSLKIAVSSFGNQTDSTEKVTSAMFPFLLIQPKTWNLNLLV 616

Query: 359 LALVNKMNWPLYQNIA----MSTSGEVASIPGSLSSINLKTINNMAENFMVHSEDHVAWF 414
           L L   +NWPL++N+A    M    ++ S   +LSSI++  IN++ E   +  ++     
Sbjct: 617 LKLGKDVNWPLFKNLAADDGMKKLPDIMST--NLSSISMDIINDLGEALSLDPDERRIEL 674

Query: 415 VE-SCN 419
           +E +CN
Sbjct: 675 IERACN 680



 Score =  242 bits (617), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 139/405 (34%), Positives = 216/405 (53%), Gaps = 32/405 (7%)

Query: 384  IPGSLSSINLKTINNMAENFMVHSEDHVAWFVESCNDXXXXXXXXXXXXXXXXXIKPKGD 443
            I  S+S++N+  IN + E FM+H  D++ W   SC D                    K +
Sbjct: 709  IRESVSALNIDVINKLVEAFMMHPADYIQWLTVSCRDSTLSKTLFYMILMHSLQ---KMN 765

Query: 444  DFSTLFESVYPILKAEWESLMSAGDVLLDEF---NCDNIDWDCSAFFDHLSYANLRPLNA 500
              S    S+      EWE L    DV L E    NC  +       +  L  ++   LN+
Sbjct: 766  SSSGKLLSI-----TEWEELEVEVDVSLKELSKSNCQEL------LYQLLDTSDFTALNS 814

Query: 501  KVMVCIFWRLLAALISALPSDILQDDDAKWVSKIKDLFVFFASSQFKHVFREHLHFLAAQ 560
            KV++C+FW+L  + I   P+      + +  S ++DLF FFA+++ +HVF+EHLHF   +
Sbjct: 815  KVLICLFWKLGESFIKLEPAHDASVLNKRLSSGLEDLFFFFATTRLRHVFKEHLHFRVRE 874

Query: 561  CRISPPRLLSKFFTEEGVPAAVQVESLQCYAFLCSLSQDRWQTELLAEFSSVLVPLAGDN 620
             ++ P   LS+  + E VP  VQ+ESL+C+++LCS   + W  ++ + F  +LVP++ DN
Sbjct: 875  AKVCPVLFLSRLISREDVPPLVQIESLRCFSYLCSSGNNEWLIQVFSSFPVLLVPMSSDN 934

Query: 621  QAIRVAAMNCIDELHALWCRIERSGKKNGNNATWFHFLGELLWLLNEQKTLILSDKKFLP 680
            Q ++ AA+NCI+ L  L   I  S               ELL ++ +Q+ LILSD KF  
Sbjct: 935  QDVKAAAINCIEALFNLRAAIYGSS------------FDELLGMIVQQRRLILSDNKFFA 982

Query: 681  LLFASTLSSSCHNILVPQNIENRFDQPTKQRIIDFILGSALKFSNYGKLMILTLLKEIGN 740
                S LSS+ +++LVP  ++ RFDQ TK+ I+  IL  A     YGKL +L+LLK++G 
Sbjct: 983  SYLTSLLSSTTNDLLVPVGLQKRFDQSTKENILSVILLCAEDLPAYGKLRVLSLLKDLGI 1042

Query: 741  AIFHAKVEPLLSHFM---KQYFDKRDKSCQKISNIETQIMCLLLE 782
             +   ++  LLS  +    QY+ K DK+ Q +S+ E  ++CLLLE
Sbjct: 1043 MLMRDEIVKLLSQLLDKRSQYYYKLDKTSQPLSDTEVDLLCLLLE 1087


>AT3G06530.2 | Symbols:  | ARM repeat superfamily protein |
           chr3:2022596-2033637 FORWARD LENGTH=2199
          Length = 2199

 Score =  341 bits (874), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 193/426 (45%), Positives = 271/426 (63%), Gaps = 11/426 (2%)

Query: 1   MIIGLLGNKAVLAPKLLNSLIRSVAEVAREEAKELMDLHWFRLSLIALINLIQSQNVEIL 60
           M++G+L N+AVL   L+  L+RS+ ++ RE AKE  D H  RLSL+ALIN +Q Q+V+++
Sbjct: 259 MVVGMLANRAVLNTNLIKRLMRSIIDIGREHAKESSDPHSLRLSLMALINFVQLQSVDLI 318

Query: 61  PMKALEILKDIRDLAGVLLELSKAFNIKKFLVVXXXXXXXXXXXXXXXQRALQSLIEKVP 120
           P KAL++  +IRD++GVLL LSK FNIK+FL V                  L S+IE VP
Sbjct: 319 PRKALDLFNEIRDISGVLLGLSKEFNIKRFLAVLLDSLLFYSSSDDKCCEVLASIIETVP 378

Query: 121 LHDSVYHIVTKILSTCVKLSQKVGDSTSLTS--AGWAKKILIIVNTKYPSELRGAVPHFL 178
           + + V H+++K+ S C+   QK  D  S TS    WAKK L++V+ KYP+ELR AVP FL
Sbjct: 379 VSNLVDHLISKVFSLCMTQYQKNSDFRSSTSVVGSWAKKFLVVVSKKYPAELRAAVPKFL 438

Query: 179 QDNKTHSKKDDSLYKILCKMLDGNLDSSFDISESRVWFALYHPKADVRRATLLDINSSGI 238
           +  +  SKK+D   ++L  MLDGN D S    +S++WF L+HP+A VR A L  +N  G+
Sbjct: 439 EATEVQSKKEDLKLEMLSCMLDGNSDMSHPFVDSKLWFRLHHPRAAVRCAALSSLN--GV 496

Query: 239 LKSKEVVSESLVDIQEAILRQLDDKDLTVVQAALNVDGLPNIIGSYKLLEALQNVLKRCI 298
           LK     +E+LV IQ+AILRQL D DL VVQAAL+ D LPNII S  LL+AL +V+KRC+
Sbjct: 497 LKDDSSKAENLVTIQDAILRQLWDDDLAVVQAALSFDKLPNIITSSGLLDALLHVVKRCV 556

Query: 299 GKLLSGSADNVNLTADVAVTCLKNAISYFHDHTDSLKKAAAMIFPCLLVIPQTQGLNLKA 358
           G L+SG + NV L  DV    LK A+S F + TDS +K  + +FP LL+ P+T  LNL  
Sbjct: 557 GILVSGVSHNVQLAVDVVALSLKIAVSSFGNQTDSTEKVTSAMFPFLLIQPKTWNLNLLV 616

Query: 359 LALVNKMNWPLYQNIA----MSTSGEVASIPGSLSSINLKTINNMAENFMVHSEDHVAWF 414
           L L   +NWPL++N+A    M    ++ S   +LSSI++  IN++ E   +  ++     
Sbjct: 617 LKLGKDVNWPLFKNLAADDGMKKLPDIMST--NLSSISMDIINDLGEALSLDPDERRIEL 674

Query: 415 VE-SCN 419
           +E +CN
Sbjct: 675 IERACN 680



 Score =  265 bits (676), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 146/405 (36%), Positives = 226/405 (55%), Gaps = 21/405 (5%)

Query: 384  IPGSLSSINLKTINNMAENFMVHSEDHVAWFVESCNDXXXXXXXXXXXXXXXXXIKPKGD 443
            I  S+S++N+  IN + E FM+H  D++ W   SC D                    K +
Sbjct: 709  IRESVSALNIDVINKLVEAFMMHPADYIQWLTVSCRDSTLSKTLFYMILMHSLQ---KMN 765

Query: 444  DFSTLFESVYPILKAEWESLMSAGDVLLDEF---NCDNIDWDCSAFFDHLSYANLRPLNA 500
              S    S+      EWE L    DV L E    NC  +       +  L  ++   LN+
Sbjct: 766  SSSGKLLSI-----TEWEELEVEVDVSLKELSKSNCQEL------LYQLLDTSDFTALNS 814

Query: 501  KVMVCIFWRLLAALISALPSDILQDDDAKWVSKIKDLFVFFASSQFKHVFREHLHFLAAQ 560
            KV++C+FW+L  + I   P+      + +  S ++DLF FFA+++ +HVF+EHLHF   +
Sbjct: 815  KVLICLFWKLGESFIKLEPAHDASVLNKRLSSGLEDLFFFFATTRLRHVFKEHLHFRVRE 874

Query: 561  CRISPPRLLSKFFTEEGVPAAVQVESLQCYAFLCSLSQDRWQTELLAEFSSVLVPLAGDN 620
             ++ P   LS+  + E VP  VQ+ESL+C+++LCS   + W  ++ + F  +LVP++ DN
Sbjct: 875  AKVCPVLFLSRLISREDVPPLVQIESLRCFSYLCSSGNNEWLIQVFSSFPVLLVPMSSDN 934

Query: 621  QAIRVAAMNCIDELHALWCRIERSGKKNGNNATWFHFLGELLWLLNEQKTLILSDKKFLP 680
            Q ++ AA+NCI+ L  L CR+E S KKNG+ A +     ELL ++ +Q+ LILSD KF  
Sbjct: 935  QDVKAAAINCIEALFNLRCRVE-SSKKNGSAAIYGSSFDELLGMIVQQRRLILSDNKFFA 993

Query: 681  LLFASTLSSSCHNILVPQNIENRFDQPTKQRIIDFILGSALKFSNYGKLMILTLLKEIGN 740
                S LSS+ +++LVP  ++ RFDQ TK+ I+  IL  A     YGKL +L+LLK++G 
Sbjct: 994  SYLTSLLSSTTNDLLVPVGLQKRFDQSTKENILSVILLCAEDLPAYGKLRVLSLLKDLGI 1053

Query: 741  AIFHAKVEPLLSHFM---KQYFDKRDKSCQKISNIETQIMCLLLE 782
             +   ++  LLS  +    QY+ K DK+ Q +S+ E  ++CLLLE
Sbjct: 1054 MLMRDEIVKLLSQLLDKRSQYYYKLDKTSQPLSDTEVDLLCLLLE 1098