Miyakogusa Predicted Gene

Lj3g3v1953410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1953410.1 Non Chatacterized Hit- tr|K4BI83|K4BI83_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,36.43,4e-17,LONGIN,Longin domain; Longin,Longin domain;
SNARE-like,Longin-like domain; no description,Longin dom,CUFF.43353.1
         (175 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10170.2 | Symbols:  | SNARE-like superfamily protein | chr4:...   185   1e-47
AT4G10170.1 | Symbols:  | SNARE-like superfamily protein | chr4:...   185   1e-47
AT1G33475.1 | Symbols:  | SNARE-like superfamily protein | chr1:...   145   1e-35
AT5G52990.1 | Symbols:  | SNARE-like superfamily protein | chr5:...    61   3e-10
AT4G27840.1 | Symbols:  | SNARE-like superfamily protein | chr4:...    60   6e-10
AT3G54300.2 | Symbols: ATVAMP727, VAMP727 | vesicle-associated m...    54   8e-08
AT3G54300.1 | Symbols: ATVAMP727, VAMP727 | vesicle-associated m...    54   8e-08
AT4G15780.1 | Symbols: ATVAMP724, VAMP724 | vesicle-associated m...    50   1e-06
AT2G32670.1 | Symbols: ATVAMP725, VAMP725 | vesicle-associated m...    48   3e-06
AT1G04750.1 | Symbols: VAMP7B, VAMP721, ATVAMP721, AT VAMP7B | v...    48   3e-06
AT1G04760.1 | Symbols: ATVAMP726, VAMP726 | vesicle-associated m...    48   4e-06

>AT4G10170.2 | Symbols:  | SNARE-like superfamily protein |
           chr4:6344587-6345351 FORWARD LENGTH=254
          Length = 254

 Score =  185 bits (470), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/176 (52%), Positives = 119/176 (67%), Gaps = 13/176 (7%)

Query: 1   MDSIPNKVYYCCVSKGNHVLYAYSGAGQEVENVAALCLESAPPFHRWYFETAGKRSYGFL 60
           M  I N V+YCCVS+ N +LY+Y+G  Q  E++AALCLE +PPFH WYFET GKR +GFL
Sbjct: 1   MGLIKNTVHYCCVSRDNQILYSYNGGDQTNESLAALCLEKSPPFHTWYFETIGKRRFGFL 60

Query: 61  MEDGYVYFTIVDEGLGNSVVLRFLEHVRDEFRKLSKKGSRGKLPNM-NSTHIQEKLVPII 119
           + DG+VYF IVDE L  S VL+FLEH+RDEF+K +++ SRG    M  S +++++LVP++
Sbjct: 61  IGDGFVYFAIVDEVLKRSSVLKFLEHLRDEFKKAARENSRGSFTAMIGSINVEDQLVPVV 120

Query: 120 RGLITSLENVSHGSGNRRDEKSPSFHVDLSPSPSNLNGQIEGASSTKAPLLGRSSK 175
             LI SLE V+  S N                 SNL  Q EG++STKAPLLGR SK
Sbjct: 121 TRLIASLERVAESSSNNE------------LKSSNLGEQSEGSNSTKAPLLGRLSK 164


>AT4G10170.1 | Symbols:  | SNARE-like superfamily protein |
           chr4:6344587-6345351 FORWARD LENGTH=254
          Length = 254

 Score =  185 bits (470), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/176 (52%), Positives = 119/176 (67%), Gaps = 13/176 (7%)

Query: 1   MDSIPNKVYYCCVSKGNHVLYAYSGAGQEVENVAALCLESAPPFHRWYFETAGKRSYGFL 60
           M  I N V+YCCVS+ N +LY+Y+G  Q  E++AALCLE +PPFH WYFET GKR +GFL
Sbjct: 1   MGLIKNTVHYCCVSRDNQILYSYNGGDQTNESLAALCLEKSPPFHTWYFETIGKRRFGFL 60

Query: 61  MEDGYVYFTIVDEGLGNSVVLRFLEHVRDEFRKLSKKGSRGKLPNM-NSTHIQEKLVPII 119
           + DG+VYF IVDE L  S VL+FLEH+RDEF+K +++ SRG    M  S +++++LVP++
Sbjct: 61  IGDGFVYFAIVDEVLKRSSVLKFLEHLRDEFKKAARENSRGSFTAMIGSINVEDQLVPVV 120

Query: 120 RGLITSLENVSHGSGNRRDEKSPSFHVDLSPSPSNLNGQIEGASSTKAPLLGRSSK 175
             LI SLE V+  S N                 SNL  Q EG++STKAPLLGR SK
Sbjct: 121 TRLIASLERVAESSSNNE------------LKSSNLGEQSEGSNSTKAPLLGRLSK 164


>AT1G33475.1 | Symbols:  | SNARE-like superfamily protein |
           chr1:12147423-12148190 REVERSE LENGTH=255
          Length = 255

 Score =  145 bits (367), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/179 (45%), Positives = 116/179 (64%), Gaps = 22/179 (12%)

Query: 1   MDSIPNKVYYCCVSKGNHVLYAYSGAG--QEVENVAALCLESAPPFHRWYFETAGKRSYG 58
           M SI N V+YCCVS+ N ++YAY+ AG  +  E++AALCLE  PPFH+WYFET GK+++G
Sbjct: 1   MGSIQNTVHYCCVSRDNQIMYAYNNAGDHRNNESLAALCLEKTPPFHKWYFETRGKKTFG 60

Query: 59  FLMEDGYVYFTIVDEGLGNSVVLRFLEHVRDEFRKLSKKGSR-GKLPNMNSTHIQEKLVP 117
           FLM+D +VYF IVD+    S VL FLE +RDE ++ +KK SR     +++ +++Q++   
Sbjct: 61  FLMKDDFVYFAIVDDVFKKSSVLDFLEKLRDELKEANKKNSRGSFSGSISFSNVQDQ--- 117

Query: 118 IIRGLITSLENVSHGSGNRRDEKSPSFHVDLSPSPSNLNGQIEG-ASSTKAPLLGRSSK 175
           I+R LI SLE                 H  L  S  +++G  +  AS++KAPLLGRS+K
Sbjct: 118 IVRRLIASLE---------------FDHTCLPLSSPSIDGAEQSYASNSKAPLLGRSNK 161


>AT5G52990.1 | Symbols:  | SNARE-like superfamily protein |
           chr5:21484188-21485006 FORWARD LENGTH=272
          Length = 272

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 4/127 (3%)

Query: 1   MDSIPNKVYYCCVSKGNHVLYAYSGAGQE-VENVAALCLESAPPFHRWYFETAGKRSYGF 59
           M S P+ + Y C++KG  VL  +    +  +E +A  C+E+ PP H  +  T  K++Y F
Sbjct: 1   MISNPSLLSYTCIAKGTVVLAEFVSRQEPGIEAIALRCIENTPPHHSMFSHTVHKKTYTF 60

Query: 60  LM-EDGYVYFTIVDEGLGNSVVLRFLEHVRDEFRKLSKKGSRG--KLPNMNSTHIQEKLV 116
            + +D +VYF+I DE +        L  +R     L K G      L N  S  +Q KL 
Sbjct: 61  AIDDDSFVYFSISDESMEKPESFWVLNRLRSAIEDLIKDGGSDVETLINPVSHCLQLKLD 120

Query: 117 PIIRGLI 123
           P+   ++
Sbjct: 121 PVFAEIV 127


>AT4G27840.1 | Symbols:  | SNARE-like superfamily protein |
           chr4:13865268-13866050 REVERSE LENGTH=260
          Length = 260

 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 2/120 (1%)

Query: 1   MDSIPNKVYYCCVSKGNHVLYAYSGAGQE-VENVAALCLESAPPFHRWYFETAGKRSYGF 59
           M S    ++Y C++KG  +L  ++   +  +E++A  C+E+ PP H     T  KR+Y  
Sbjct: 1   MTSNQRMLFYSCIAKGTVILAEFASKEEPGIEDLALRCIENVPPHHSMISHTVHKRTYAL 60

Query: 60  LMEDGYVYFTIVDEGLGNSVVLRFLEHVRDEFRKLSKKGSRGK-LPNMNSTHIQEKLVPI 118
           +++  + YF I+DE +  S  +     ++     L + GS    L N     +Q KL P+
Sbjct: 61  IIDGLFSYFAILDEVVAKSESVWLFNRLKSATESLMEDGSTADSLDNPTQHCLQSKLDPV 120


>AT3G54300.2 | Symbols: ATVAMP727, VAMP727 | vesicle-associated
          membrane protein 727 | chr3:20108355-20110127 REVERSE
          LENGTH=240
          Length = 240

 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 44/84 (52%)

Query: 10 YCCVSKGNHVLYAYSGAGQEVENVAALCLESAPPFHRWYFETAGKRSYGFLMEDGYVYFT 69
          Y  V+KG  VL  ++        +A  CL+  P     Y  +    ++ FL+++G+V+  
Sbjct: 8  YSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVDNGFVFLV 67

Query: 70 IVDEGLGNSVVLRFLEHVRDEFRK 93
          + DE  G SV   FLE V+++F+K
Sbjct: 68 VADESTGRSVPFVFLERVKEDFKK 91


>AT3G54300.1 | Symbols: ATVAMP727, VAMP727 | vesicle-associated
          membrane protein 727 | chr3:20108355-20110127 REVERSE
          LENGTH=240
          Length = 240

 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 44/84 (52%)

Query: 10 YCCVSKGNHVLYAYSGAGQEVENVAALCLESAPPFHRWYFETAGKRSYGFLMEDGYVYFT 69
          Y  V+KG  VL  ++        +A  CL+  P     Y  +    ++ FL+++G+V+  
Sbjct: 8  YSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVDNGFVFLV 67

Query: 70 IVDEGLGNSVVLRFLEHVRDEFRK 93
          + DE  G SV   FLE V+++F+K
Sbjct: 68 VADESTGRSVPFVFLERVKEDFKK 91


>AT4G15780.1 | Symbols: ATVAMP724, VAMP724 | vesicle-associated
          membrane protein 724 | chr4:8980081-8981697 REVERSE
          LENGTH=222
          Length = 222

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)

Query: 10 YCCVSKGNHVLYAYSGAGQEVENVAALCLESAPPFHRWYFE-TAGKRSYGFLMEDGYVYF 68
          Y  V++G  +L  Y+       ++AA CL+  P      F       ++ FL+EDGY Y 
Sbjct: 8  YSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDGYAYC 67

Query: 69 TIVDEGLGNSVVLRFLEHVRDEFRK 93
           +  + L   + + FLE V+ +F+K
Sbjct: 68 VVAKDSLSKQISIAFLERVKADFKK 92


>AT2G32670.1 | Symbols: ATVAMP725, VAMP725 | vesicle-associated
           membrane protein 725 | chr2:13857941-13859346 FORWARD
           LENGTH=285
          Length = 285

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 43/84 (51%)

Query: 10  YCCVSKGNHVLYAYSGAGQEVENVAALCLESAPPFHRWYFETAGKRSYGFLMEDGYVYFT 69
           Y  V++G  +L  Y+        VAA CL+  P  +  +       ++ +L+E+G+ Y  
Sbjct: 73  YSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCV 132

Query: 70  IVDEGLGNSVVLRFLEHVRDEFRK 93
           +  E +G  + + FLE V+++F K
Sbjct: 133 VAVESVGRQIPMAFLERVKEDFNK 156


>AT1G04750.1 | Symbols: VAMP7B, VAMP721, ATVAMP721, AT VAMP7B |
          vesicle-associated membrane protein 721 |
          chr1:1331857-1333426 REVERSE LENGTH=219
          Length = 219

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/86 (24%), Positives = 44/86 (51%)

Query: 8  VYYCCVSKGNHVLYAYSGAGQEVENVAALCLESAPPFHRWYFETAGKRSYGFLMEDGYVY 67
          + Y  V++G  +L  ++       ++AA CL+  P  +  +       ++ +L+EDG+ Y
Sbjct: 6  LIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVEDGFTY 65

Query: 68 FTIVDEGLGNSVVLRFLEHVRDEFRK 93
            +  +  G  + + FLE V+++F K
Sbjct: 66 CVVAVDSAGRQIPMSFLERVKEDFNK 91


>AT1G04760.1 | Symbols: ATVAMP726, VAMP726 | vesicle-associated
          membrane protein 726 | chr1:1334760-1336070 FORWARD
          LENGTH=220
          Length = 220

 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 43/84 (51%)

Query: 10 YCCVSKGNHVLYAYSGAGQEVENVAALCLESAPPFHRWYFETAGKRSYGFLMEDGYVYFT 69
          Y  V++G  +L  Y+       +VAA CL+  P  +  +       ++ +L ++G+ Y  
Sbjct: 8  YSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLADNGFTYCV 67

Query: 70 IVDEGLGNSVVLRFLEHVRDEFRK 93
          +V E  G  + + FLE V+++F K
Sbjct: 68 VVIESAGRQIPMAFLERVKEDFNK 91