Miyakogusa Predicted Gene

Lj3g3v1933150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1933150.1 Non Chatacterized Hit- tr|A2YC35|A2YC35_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,54.32,9e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.43326.1
         (171 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G56170.1 | Symbols: LLG1 | LORELEI-LIKE-GPI-ANCHORED PROTEIN ...   171   3e-43
AT4G26466.1 | Symbols: LRE | lorelei | chr4:13367645-13368629 RE...   144   4e-35
AT4G28280.2 | Symbols: LLG3 | LORELEI-LIKE-GPI ANCHORED PROTEIN ...   141   3e-34
AT2G20700.1 | Symbols: LLG2 | LORELEI-LIKE-GPI ANCHORED PROTEIN ...   139   7e-34
AT4G28280.1 | Symbols: LLG3 | LORELEI-LIKE-GPI ANCHORED PROTEIN ...   126   7e-30

>AT5G56170.1 | Symbols: LLG1 | LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 |
           chr5:22736072-22737108 FORWARD LENGTH=168
          Length = 168

 Score =  171 bits (432), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 78/99 (78%), Positives = 88/99 (88%), Gaps = 1/99 (1%)

Query: 36  DAVFGSQAHT-GRNLLQAKKGCSVNFEFLNYTIITSKCKGPSYPPKDCCGAFKEFACPYV 94
           D VF SQ+   GRNLLQ KK C VNFEF+NYTIITSKCKGP YPPK+CCGAFK+FACPY 
Sbjct: 28  DGVFESQSLVLGRNLLQTKKTCPVNFEFMNYTIITSKCKGPKYPPKECCGAFKDFACPYT 87

Query: 95  DVLNDLTNDCASTMFSYINLYGKYPPGLFAHECREGKEG 133
           D LNDL++DCA+TMFSYINLYGKYPPGLFA++C+EGKEG
Sbjct: 88  DQLNDLSSDCATTMFSYINLYGKYPPGLFANQCKEGKEG 126


>AT4G26466.1 | Symbols: LRE | lorelei | chr4:13367645-13368629
           REVERSE LENGTH=165
          Length = 165

 Score =  144 bits (362), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 62/99 (62%), Positives = 79/99 (79%), Gaps = 1/99 (1%)

Query: 36  DAVFGSQAH-TGRNLLQAKKGCSVNFEFLNYTIITSKCKGPSYPPKDCCGAFKEFACPYV 94
           D VF SQ   +GRNL  AKK C VNFE+++Y ++T +CKGP++P K+CC AFKEFACPYV
Sbjct: 25  DGVFESQTSVSGRNLRHAKKKCEVNFEYMDYKVLTKRCKGPAFPAKECCSAFKEFACPYV 84

Query: 95  DVLNDLTNDCASTMFSYINLYGKYPPGLFAHECREGKEG 133
             +ND+ +DCA TMFSY+N+YG YP GLFA+ECRE K+G
Sbjct: 85  SQINDMNSDCAQTMFSYMNIYGNYPTGLFANECRERKDG 123


>AT4G28280.2 | Symbols: LLG3 | LORELEI-LIKE-GPI ANCHORED PROTEIN 3 |
           chr4:14010785-14011487 FORWARD LENGTH=160
          Length = 160

 Score =  141 bits (355), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 65/95 (68%), Positives = 74/95 (77%)

Query: 39  FGSQAHTGRNLLQAKKGCSVNFEFLNYTIITSKCKGPSYPPKDCCGAFKEFACPYVDVLN 98
           F S   T R LLQAK  C  +F   NYTIITSKCKGP+YP K CC AFK+FACP+ +VLN
Sbjct: 31  FESHPSTSRALLQAKATCKEDFAAKNYTIITSKCKGPNYPAKVCCSAFKDFACPFAEVLN 90

Query: 99  DLTNDCASTMFSYINLYGKYPPGLFAHECREGKEG 133
           D   DCASTMFSYINLYG+YPPG+FA+ C+EGKEG
Sbjct: 91  DEKTDCASTMFSYINLYGRYPPGIFANMCKEGKEG 125


>AT2G20700.1 | Symbols: LLG2 | LORELEI-LIKE-GPI ANCHORED PROTEIN 2 |
           chr2:8925003-8925714 REVERSE LENGTH=163
          Length = 163

 Score =  139 bits (351), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 70/134 (52%), Positives = 85/134 (63%), Gaps = 1/134 (0%)

Query: 39  FGSQAHTGRNLLQAKKGCSVNFEFLNYTIITSKCKGPSYPPKDCCGAFKEFACPYVDVLN 98
           F   A T R LLQ +  C  +F   NYTIITS+CKGP+YP   CC AFK+FACP+ +VLN
Sbjct: 27  FDGHAATSRALLQTRTTCKEDFANKNYTIITSRCKGPNYPANVCCSAFKDFACPFAEVLN 86

Query: 99  DLTNDCASTMFSYINLYGKYPPGLFAHECREGKEGXX-XXXXXXXXXXDDTSSQVVHFPS 157
           D  NDCASTMFSYINLYG+YPPG+FA+ C+EGKEG              D+  +     S
Sbjct: 87  DEKNDCASTMFSYINLYGRYPPGIFANMCKEGKEGLDCTDVTQSASATSDSIPRASTTAS 146

Query: 158 LVLVLTACFLILLF 171
           L ++ T   L LLF
Sbjct: 147 LAVLSTFLVLCLLF 160


>AT4G28280.1 | Symbols: LLG3 | LORELEI-LIKE-GPI ANCHORED PROTEIN 3 |
           chr4:14011083-14011487 FORWARD LENGTH=134
          Length = 134

 Score =  126 bits (317), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 3/90 (3%)

Query: 44  HTGRNLLQAKKGCSVNFEFLNYTIITSKCKGPSYPPKDCCGAFKEFACPYVDVLNDLTND 103
           H   ++L A   C  +F   NYTIITSKCKGP+YP K CC AFK+FACP+ +VLND   D
Sbjct: 13  HYVNDILTA---CKEDFAAKNYTIITSKCKGPNYPAKVCCSAFKDFACPFAEVLNDEKTD 69

Query: 104 CASTMFSYINLYGKYPPGLFAHECREGKEG 133
           CASTMFSYINLYG+YPPG+FA+ C+EGKEG
Sbjct: 70  CASTMFSYINLYGRYPPGIFANMCKEGKEG 99