Miyakogusa Predicted Gene

Lj3g3v1931890.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1931890.2 Non Chatacterized Hit- tr|D7MF95|D7MF95_ARALL
Putative uncharacterized protein (Fragment)
OS=Arabido,33.49,3e-17,seg,NULL; coiled-coil,NULL,CUFF.43452.2
         (212 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G56210.1 | Symbols: WIP2 | WPP domain interacting protein 2 |...    75   3e-14
AT4G26455.1 | Symbols: WIP1 | WPP domain interacting protein 1 |...    67   8e-12

>AT5G56210.1 | Symbols: WIP2 | WPP domain interacting protein 2 |
           chr5:22750660-22752363 REVERSE LENGTH=509
          Length = 509

 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 25/213 (11%)

Query: 3   DPLIESIRSXXXXXXXXXXXXXKFKETGIE--VVSPDDDLAKCSSASAGTIGVDIGLHNS 60
           DPLI ++ S             KF+E G E  + S  D     S   AG  G       +
Sbjct: 272 DPLIVAVNSFQTLQEALQKELQKFQELGKEEPITSLHDGGESSSCIHAGHEGAS----EA 327

Query: 61  CVSAHSGAEEIKQTASSSLELQVLNLTQNISSLENKLKELQGMVALKDSRIVELETALSS 120
             S   G+E++ +   +SL+ ++LNL  N+  LE KL+E + ++ +K+++I ELE+ ++ 
Sbjct: 328 SSSYRFGSEKMGEMELTSLDSEILNLVNNVEHLEIKLEEAKRILEVKETQIRELESTINV 387

Query: 121 GKSPKEESASTIGLXXXXXXXXXXXXXGLFRQKIEAEIEYLAISKVMQNLKAGKDFQLTL 180
            ++      + IG+              +F+QK+EAEIEY+  S+ + NLK     ++ L
Sbjct: 388 SETCN--GGTEIGIED------------IFQQKVEAEIEYIIFSRSVGNLKR----RIKL 429

Query: 181 LEEQEKLSENQ-EQVEIKASALKNKAEELEKYC 212
           +EE++ L  ++ ++ E KA  LKN+A++L+ +C
Sbjct: 430 IEEEKTLGLSKLDKAETKAENLKNQAQDLQNHC 462


>AT4G26455.1 | Symbols: WIP1 | WPP domain interacting protein 1 |
           chr4:13365737-13367384 FORWARD LENGTH=489
          Length = 489

 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 79/145 (54%), Gaps = 26/145 (17%)

Query: 76  SSSLELQVLNLTQNISSLENKLKELQGMVALKDSRIVELETALSSGKSPKEESASTIGLX 135
           ++S   +++ L  N+  LEN L+E + M+ +K+S I +LE+  ++ +S      + I + 
Sbjct: 317 ANSPHPEIVTLVNNVEQLENMLEETRSMLEVKESHIRDLES--TTNQSKHSWGGTEIVVE 374

Query: 136 XXXXXXXXXXXXGLFRQKIEAEIEYLAISKVMQNLKAGKDFQLTLLEEQEKLSENQE--- 192
                        +FRQKIEAEIEYL  S+ + NL +    Q+ L++EQE L+E Q    
Sbjct: 375 D------------IFRQKIEAEIEYLIYSRSIDNLNS----QMKLIDEQESLAEEQTHET 418

Query: 193 -----QVEIKASALKNKAEELEKYC 212
                +V+ KA+   N+A++L+  C
Sbjct: 419 LNKLGRVQTKAANFTNRAQDLQNDC 443