Miyakogusa Predicted Gene

Lj3g3v1931830.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1931830.1 Non Chatacterized Hit- tr|D7MF95|D7MF95_ARALL
Putative uncharacterized protein (Fragment)
OS=Arabido,28.57,0.00000000000004,seg,NULL,CUFF.43335.1
         (649 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G26450.1 | Symbols:  | unknown protein; Has 614 Blast hits to...    74   2e-13

>AT4G26450.1 | Symbols:  | unknown protein; Has 614 Blast hits to
           492 proteins in 137 species: Archae - 0; Bacteria - 94;
           Metazoa - 255; Fungi - 76; Plants - 69; Viruses - 0;
           Other Eukaryotes - 120 (source: NCBI BLink). |
           chr4:13362556-13364920 FORWARD LENGTH=708
          Length = 708

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 196/447 (43%), Gaps = 68/447 (15%)

Query: 190 LQKSNSNEFEPRSEDGDDLEAAETDKDQVSGELLEVKQGSSGAEKD-TDDMVVEFAKSSN 248
           +Q+S S EF  + E   D E+   DK  +  E  + K GSS A KD   D  +      +
Sbjct: 209 VQRSASGEFMRKCEGAGDSESV-LDKYNLQDEA-QSKTGSSSAGKDIVQDCEISKVSEGS 266

Query: 249 GLENVSASVSKVKDGT--GDDDN----EKLNILKNLSAQSSDQE---NDSSSRDFTDLLS 299
              +  +   K + G   G+D+N    E  +I +     S DQ+   ++S ++   DL +
Sbjct: 267 SSLSAGSGEMKGRSGGNGGEDENQTAIEDGSIHQRCEDASIDQQCGADESFTKSGIDLAT 326

Query: 300 LCKSFKAPTRTRSSRTRKNLKADQHGNNED---NNTRDIEDLQEPEVLAENETVKSSSSS 356
           LCK  K PTRTRSS T K  K     N +D   N+  + ED  E       ++   + S+
Sbjct: 327 LCKFEKVPTRTRSSLTAKGPKLYLSHNIKDTSHNSGLEEEDQTENRCETRGQSSGKADST 386

Query: 357 GDLISEQTYDLVHLDSDIVEVEPVHAAESTEEFDVASKDEEVPSIGSHPGQDRDYMDDKN 416
           GD  ++Q  D   +    +E    H + S             PS            D+  
Sbjct: 387 GDE-NDQVEDFALVQ--YIENSKCHRSNS------------FPS--------SILRDNSE 423

Query: 417 QEPTATLPEYGSCSSMSEERGEKRVAE-DDVREETKRLREWLPSPVPKTEEYFM------ 469
           +E    LP      S+ +  GEKR  E  D+ E +KR R+W+   V +  E F       
Sbjct: 424 KESGLELPNLHRSHSVGKV-GEKRPGEGSDLEEGSKRQRDWVA--VSEANERFNMFKTSG 480

Query: 470 -HNNPIEVKDSPGEDEILHADEVPVTSDHASLISSSQFTE---GGDRPFFQCPEEKPSLP 525
              +P E   +   ++ L          H SL+++S +     G   P +   EE    P
Sbjct: 481 NQCDPEEEGKTSSFNKRLIDGAAGKRVSHESLVNNSTYNRTHTGRTGPGY--AEEHQLFP 538

Query: 526 SSFRTCDLNLMEASEVHDNHVDHPVLIYPASVSETKKAVPVDIDLSMSRASLSGKFNTHS 585
           +SF+ CDLNL  AS+V+D             + E+++AV  D+ +S S  SL    +T  
Sbjct: 539 ASFKMCDLNLGGASDVNDG------------IKESRQAVDFDLSISSSSKSLEFGTSTRM 586

Query: 586 TSGKEIEVIDLENDE--VENDSTPKEK 610
           ++GKEIEVI+L++D+  V++ + P  K
Sbjct: 587 SNGKEIEVINLDDDQEVVKSSNDPGRK 613