Miyakogusa Predicted Gene
- Lj3g3v1918710.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1918710.1 Non Chatacterized Hit- tr|F6HPH4|F6HPH4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.88,2e-18,PPR,Pentatricopeptide repeat; TPR-like,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR_2,,CUFF.43303.1
(623 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 359 3e-99
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 4e-51
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 4e-51
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 181 2e-45
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 175 7e-44
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 171 2e-42
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 167 2e-41
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 164 2e-40
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 3e-40
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 4e-40
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 5e-40
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 6e-40
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 6e-40
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 159 4e-39
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 5e-39
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 5e-39
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 8e-39
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 8e-39
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 1e-38
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 2e-38
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 4e-38
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 8e-38
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 1e-37
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 153 3e-37
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 153 4e-37
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 153 4e-37
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 6e-37
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 9e-37
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 9e-37
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 1e-36
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 1e-36
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 4e-36
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 4e-36
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 2e-35
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 5e-35
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 1e-34
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 8e-34
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 1e-33
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 2e-33
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 7e-32
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 133 4e-31
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 6e-31
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 132 8e-31
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 8e-31
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-30
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 130 2e-30
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 2e-30
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 8e-30
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 6e-29
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 124 1e-28
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-28
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 4e-28
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 123 4e-28
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 1e-27
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 1e-27
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 2e-27
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 2e-26
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 116 4e-26
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 9e-26
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 114 2e-25
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 114 3e-25
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 112 9e-25
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 111 2e-24
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 110 3e-24
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 4e-24
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-23
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 107 3e-23
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 8e-23
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 102 6e-22
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 2e-21
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 96 8e-20
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 94 4e-19
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 91 2e-18
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 4e-18
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 85 2e-16
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 82 1e-15
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 3e-15
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 73 7e-13
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 70 6e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 68 2e-11
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 68 2e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 68 2e-11
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 67 5e-11
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 65 1e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 64 3e-10
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 63 5e-10
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 61 2e-09
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 61 2e-09
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 60 3e-09
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 60 6e-09
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 7e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 59 8e-09
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 59 8e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 59 1e-08
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 57 3e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 57 3e-08
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 57 4e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 57 4e-08
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 57 5e-08
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 56 6e-08
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 56 6e-08
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 8e-08
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 55 1e-07
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 54 3e-07
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 54 3e-07
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 54 3e-07
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 6e-07
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 6e-07
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 7e-07
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 53 7e-07
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 53 8e-07
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 52 1e-06
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 52 1e-06
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 52 2e-06
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 50 5e-06
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-06
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 8e-06
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 359 bits (922), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 217/566 (38%), Positives = 313/566 (55%), Gaps = 64/566 (11%)
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
++MLE +F TY+ +I FC ID A TL +M KG P+VVTYN+L+
Sbjct: 194 KEMLESQVSPNVF----TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 181
YC+ +D +LR+MA +GL P++ SYN VI+ C +G D
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 241
TY++L++ C E +A + EMLR G++P +TYT L+++ C G +A D
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 242 EMIHKGFLPDFVT---------------------------GFSPAIVTYNALIHGLCFLD 274
+M +G P+ T GFSP++VTYNALI+G C
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 275 RVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTY 334
++E+A+ +L M E GLSP+ VSYSTV+SGFC+ ++ +A +K E +K I D TY
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP-DTITY 488
Query: 335 DSLMDSLS-----------YED-----------TYSSVMNDYLAEGNMQRALQLDHDMSR 372
SL+ YE+ TY++++N Y EG++++ALQL ++M
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 373 DGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFK 432
G L V YSVLINGL+K++RTREAKR LL + + S+PS Y L+ENCSN EFK
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE--SVPSDVTYHTLIENCSNIEFK 606
Query: 433 SLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN-KTDGGMYNLLIFEHCRSHNVHKA 491
S+V L+K + M+ + +A +ML G+N K DG YN++I HCR+ ++ KA
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESML-------GKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 492 YNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEI 551
Y +Y EMV G H +V+AL+ AL + NE++ VI + LRSC LS++EQ KVL EI
Sbjct: 660 YTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEI 719
Query: 552 NVTKSEIYALLDVLAEMAMDSLLLDG 577
N + + +LDVLAEMA D L +G
Sbjct: 720 NHREGNMDVVLDVLAEMAKDGFLPNG 745
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 194/356 (54%), Gaps = 11/356 (3%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
+C+ G + A + L+ M+ +GL +ERTY++++ F ++ A+ +L EM GFSPS
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VVTYN+L+ +C ++ A+ +L M E+GLSPDV SY+ V+S FC
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
V+KGI PD TYSSL++ C ++R EA DL+ EMLR G+ PDE TYT L+NA C+ G
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ KA LH+EM+ KG LPD +VTY+ LI+GL R EA +L +
Sbjct: 535 DLEKALQLHNEMVEKGVLPD--------VVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSS 349
P+ V+Y T+I C E L K + + ++S++ D Y+
Sbjct: 587 VPSDVTYHTLIEN-CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 350 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 405
+++ + G++++A L +M + G+L V L+ LHK+ + E ++++
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV 701
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 200/455 (43%), Gaps = 88/455 (19%)
Query: 115 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 174
++ +V +Y R +DKA+ I+ G P V SYN V+
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVL-------------------- 176
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 234
DA S ++ +S A ++F+EML VSP+ TY L+ C G
Sbjct: 177 ------DATIRS--------KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNID 222
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
A L D+M KG LP+ +VTYN LI G C L ++++ ++LR M GL PN
Sbjct: 223 VALTLFDKMETKGCLPN--------VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN 274
Query: 295 AVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED--------- 345
+SY+ VI+G C+ G + + + E + + LDE TY++L+ E
Sbjct: 275 LISYNVVINGLCREGRMKEVSFVLTEMNRRG-YSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 346 -------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKK 392
TY+S+++ GNM RA++ M G + Y+ L++G +K
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 393 ARTREAKRDLLYIASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMRDLSDDAA 451
EA R L + +GF PS Y+ L+ +C + + + +++D + LS D
Sbjct: 394 GYMNEAYRVLREMNDNGF--SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 452 TAHTTM------------LHLKNK-TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 498
+ T + L +K + + K D Y+ LI C +A ++Y EM
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 499 VHYGHAPHMFSVLALISA--LDDD-----RMYNEM 526
+ G P F+ ALI+A ++ D +++NEM
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/526 (26%), Positives = 237/526 (45%), Gaps = 48/526 (9%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
+C+ GRI EA +L +M+ KG D +YS+V+ +C ++D L+ M KG P+
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
Y S++ CR + +A M +G+ PD Y +I FC
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ I PD TY++++ C + EA LF EM G+ PD +T+T L+N C G
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
AF +H+ MI G SP +VTY LI GLC ++ A E+L M ++GL
Sbjct: 436 HMKDAFRVHNHMIQ--------AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
PN +Y+++++G C+ G + +A +L E E L+ DT TY+++M
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG---LNADTV-----------TYTTLM 533
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
+ Y G M +A ++ +M G + V ++VL+NG + ++ L ++ + G
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI- 592
Query: 412 SMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT 470
P+ T ++ L++ C + K+ + KD R + D T
Sbjct: 593 -APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT------------------ 633
Query: 471 DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVI 530
Y L+ HC++ N+ +A+ ++ EM G + + + LI + + E V
Sbjct: 634 ----YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 531 NNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEMAMDSLLLD 576
+ R +D E S+ ++D + E+ +++ L+D
Sbjct: 690 DQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI-IENYLVD 734
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 175/435 (40%), Gaps = 78/435 (17%)
Query: 130 KAVGILRAMAERGLSPDVDSYN---RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYS 186
+A + M GL VDS N +SK C V G+ + A+Y+
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEV--GVCWNVASYN 250
Query: 187 SLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHK 246
++ +C R+ EA L M G +PD ++Y+ ++N C GE K + L + M K
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 247 GFLPD---------------------------FVTGFSPAIVTYNALIHGLCFLDRVEEA 279
G P+ G P V Y LI G C + A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 280 LEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMD 339
+ M ++P+ ++Y+ +ISGFCQIG++ +A +L E K L+ D+
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG---LEPDSV----- 422
Query: 340 SLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 399
T++ ++N Y G+M+ A ++ + M + G + V Y+ LI+GL K+ A
Sbjct: 423 ------TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 400 RDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTML 458
L + G P+ Y+ ++ C + + V+LV ++ L+ D T
Sbjct: 477 ELLHEMWKIGL--QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT------ 528
Query: 459 HLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL- 517
Y L+ +C+S + KA + EM+ G P + + L++
Sbjct: 529 ----------------YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 518 ------DDDRMYNEM 526
D +++ N M
Sbjct: 573 LHGMLEDGEKLLNWM 587
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 134/342 (39%), Gaps = 54/342 (15%)
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGG----VSPDELTYTRLLNACCLVGEFTKA 236
D + + L L EA +F +ML G V + TRL C
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 237 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAV 296
F E+ G + +YN +IH +C L R++EA +L M G +P+ +
Sbjct: 234 FREFPEV-----------GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 297 SYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLA 356
SYSTV++G+C+ GEL K ++L + K L ++Y Y S++
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKG---LKPNSY-----------IYGSIIGLLCR 328
Query: 357 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 416
+ A + +M R G L V Y+ LI+G K+ R A + + S P
Sbjct: 329 ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI--TPDV 386
Query: 417 TVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMY 475
Y ++ C + +L + + L D+ T +
Sbjct: 387 LTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT----------------------F 424
Query: 476 NLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
LI +C++ ++ A+ ++ M+ G +P++ + LI L
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 45 AFQSL-KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 103
F SL K+ C + A + + M +G+ D +TY +++ C + A L EM
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 104 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 151
KGFS SV TY+ L+ + +R +A + M GL+ D + ++
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/526 (26%), Positives = 237/526 (45%), Gaps = 48/526 (9%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
+C+ GRI EA +L +M+ KG D +YS+V+ +C ++D L+ M KG P+
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
Y S++ CR + +A M +G+ PD Y +I FC
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ I PD TY++++ C + EA LF EM G+ PD +T+T L+N C G
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
AF +H+ MI G SP +VTY LI GLC ++ A E+L M ++GL
Sbjct: 436 HMKDAFRVHNHMIQ--------AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
PN +Y+++++G C+ G + +A +L E E L+ DT TY+++M
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG---LNADTV-----------TYTTLM 533
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
+ Y G M +A ++ +M G + V ++VL+NG + ++ L ++ + G
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI- 592
Query: 412 SMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT 470
P+ T ++ L++ C + K+ + KD R + D T
Sbjct: 593 -APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT------------------ 633
Query: 471 DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVI 530
Y L+ HC++ N+ +A+ ++ EM G + + + LI + + E V
Sbjct: 634 ----YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 531 NNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEMAMDSLLLD 576
+ R +D E S+ ++D + E+ +++ L+D
Sbjct: 690 DQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI-IENYLVD 734
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 175/435 (40%), Gaps = 78/435 (17%)
Query: 130 KAVGILRAMAERGLSPDVDSYN---RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYS 186
+A + M GL VDS N +SK C V G+ + A+Y+
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEV--GVCWNVASYN 250
Query: 187 SLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHK 246
++ +C R+ EA L M G +PD ++Y+ ++N C GE K + L + M K
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 247 GFLPD---------------------------FVTGFSPAIVTYNALIHGLCFLDRVEEA 279
G P+ G P V Y LI G C + A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 280 LEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMD 339
+ M ++P+ ++Y+ +ISGFCQIG++ +A +L E K L+ D+
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG---LEPDSV----- 422
Query: 340 SLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 399
T++ ++N Y G+M+ A ++ + M + G + V Y+ LI+GL K+ A
Sbjct: 423 ------TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 400 RDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTML 458
L + G P+ Y+ ++ C + + V+LV ++ L+ D T
Sbjct: 477 ELLHEMWKIGL--QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT------ 528
Query: 459 HLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL- 517
Y L+ +C+S + KA + EM+ G P + + L++
Sbjct: 529 ----------------YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 518 ------DDDRMYNEM 526
D +++ N M
Sbjct: 573 LHGMLEDGEKLLNWM 587
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 134/342 (39%), Gaps = 54/342 (15%)
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGG----VSPDELTYTRLLNACCLVGEFTKA 236
D + + L L EA +F +ML G V + TRL C
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 237 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAV 296
F E+ G + +YN +IH +C L R++EA +L M G +P+ +
Sbjct: 234 FREFPEV-----------GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 297 SYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLA 356
SYSTV++G+C+ GEL K ++L + K L ++Y Y S++
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKG---LKPNSY-----------IYGSIIGLLCR 328
Query: 357 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 416
+ A + +M R G L V Y+ LI+G K+ R A + + S P
Sbjct: 329 ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI--TPDV 386
Query: 417 TVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMY 475
Y ++ C + +L + + L D+ T +
Sbjct: 387 LTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT----------------------F 424
Query: 476 NLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
LI +C++ ++ A+ ++ M+ G +P++ + LI L
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 45 AFQSL-KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 103
F SL K+ C + A + + M +G+ D +TY +++ C + A L EM
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 104 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 151
KGFS SV TY+ L+ + +R +A + M GL+ D + ++
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 218/494 (44%), Gaps = 46/494 (9%)
Query: 52 LCREGRIPEAEQMLEVMKCK-GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 110
C+EGR+ +A ++ M + G F D+ T+++++ C + A ++ M+ +G+ P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
V TYNS++ C+ V +AV +L M R SP+ +YN +IS C
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
KGI PD T++SL++ LC+ + A +LF EM G PDE TY L+++ C
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
G+ +A ++ +M ++G + +++TYN LI G C ++ EA EI M G
Sbjct: 449 GKLDEALNMLKQM--------ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 291 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 350
+S N+V+Y+T+I G C+ + A +L + + D Y TY+S+
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQL---MDQMIMEGQKPDKY-----------TYNSL 546
Query: 351 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 410
+ + G++++A + M+ +G V Y LI+GL K R A + L I G
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 411 LSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT 470
P + N + L K + +A ML E
Sbjct: 607 NLTP----------HAYNPVIQGLFRKRK-------TTEAINLFREMLE-----QNEAPP 644
Query: 471 DGGMYNLLIFEHCRSHN-VHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWV 529
D Y ++ C + +A + +E++ G P S+ L L M + +
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKL 704
Query: 530 INNTLRSCNLSDSE 543
+N ++ S+ E
Sbjct: 705 VNMVMQKARFSEEE 718
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 208/473 (43%), Gaps = 41/473 (8%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K LCR ++ A MLE M GL DE+T+++V+ + +D A + +M+ G
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC 255
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER-GLSPDVDSYNRVISKFCXXXXXXXXX 167
S S V+ N +V +C+ V+ A+ ++ M+ + G PD ++N +++ C
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
+ +G PD TY+S++ LC + EA ++ +M+ SP+ +TY L++
Sbjct: 316 EIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTL 375
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
C + +A L + KG LPD + T+N+LI GLC A+E+ M
Sbjct: 376 CKENQVEEATELARVLTSKGILPD--------VCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 347
G P+ +Y+ +I C G+L D+A+ L + S+ TY
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKL-----------DEALNMLKQMELSGCARSVI---TY 473
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 407
+++++ + + A ++ +M G + V Y+ LI+GL K R +A + + +
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 408 DGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN---- 462
+G P Y+ LL + C + K ++V+ + D T T + L
Sbjct: 534 EG--QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 463 ----------KTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 505
+ G N T YN +I R +A N++ EM+ AP
Sbjct: 592 EVASKLLRSIQMKGINLTPHA-YNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 202/469 (43%), Gaps = 55/469 (11%)
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
GL D Y+ ++ + N + ++M G P V T+N L+ A CR + A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 132 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 191
+ +L M GL PD ++ V+ + V+ G + + ++
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 192 LCVEQRLSEAFDLFREML-RGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 250
C E R+ +A + +EM + G PD+ T+ L+N C G A + D M+ +G+ P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 251 DFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGE 310
D + TYN++I GLC L V+EA+E+L M SPN V+Y+T+IS C+ +
Sbjct: 329 D--------VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 311 LGKAYELKIETEDKAIWWLDEDTYDSLMDSLSY----------------------EDTYS 348
+ +A EL K I D T++SL+ L E TY+
Sbjct: 381 VEEATELARVLTSKGILP-DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD 408
+++ ++G + AL + M G S + Y+ LI+G K +TREA+ +
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 409 GFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN 468
G +S S T Y+ L++ S +DAA M+ +G+
Sbjct: 500 G-VSRNSVT-YNTLIDGLCKSR---------------RVEDAAQLMDQMI-----MEGQ- 536
Query: 469 KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
K D YN L+ CR ++ KA ++ M G P + + LIS L
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 198/416 (47%), Gaps = 32/416 (7%)
Query: 17 NVNIYNGMIRGFATAAGKSD--------SESKKVGEAFQSLKRLCREGRIPEAEQMLEVM 68
+V YN MI G+ A ++ S S V L+ LC G++ +A ++L+ M
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 69 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 128
+ + D TY+ +I C + + A LL EM +G +P VVTYN LV C+ +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 129 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 188
D+A+ L M G P+V ++N ++ C + KG P T++ L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 189 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 248
+ LC + L A D+ +M + G P+ L+Y LL+ C + +A + M+ +G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 249 LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQI 308
PD IVTYN ++ LC +VE+A+EIL + G SP ++Y+TVI G +
Sbjct: 411 YPD--------IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 309 GELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDH 368
G+ GKA +L E K L DT TYSS++ EG + A++ H
Sbjct: 463 GKTGKAIKLLDEMRAKD---LKPDTI-----------TYSSLVGGLSREGKVDEAIKFFH 508
Query: 369 DMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 424
+ R G + V ++ ++ GL K +T A L+++ + G P+ T Y IL+E
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG--CKPNETSYTILIE 562
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/518 (24%), Positives = 228/518 (44%), Gaps = 73/518 (14%)
Query: 44 EAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 103
E+ L+++ R G + E + LE M G D +++I FC L K A +L +
Sbjct: 104 ESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEIL 163
Query: 104 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 163
G P V+TYN ++ YC+ ++ A+ +L M+ +SPDV +YN ++ C
Sbjct: 164 EGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKL 220
Query: 164 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 223
+ + +PD TY+ L+EA C + + A L EM G +PD +TY L
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 224 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVT---------------------------GF 256
+N C G +A ++M G P+ +T GF
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
SP++VT+N LI+ LC + A++IL MP+ G PN++SY+ ++ GFC+ ++
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM----- 395
Query: 317 LKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDG 374
D+AI +L+ ++ Y D TY++++ +G ++ A+++ + +S G
Sbjct: 396 ------DRAIEYLER-----MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 375 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSN-SEFKS 433
+ Y+ +I+GL K +T +A + L + + P Y L+ S +
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL--KPDTITYSSLVGGLSREGKVDE 502
Query: 434 LVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYN 493
++ ++ + +A T ++ ML L C+S +A +
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGL----------------------CKSRQTDRAID 540
Query: 494 MYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVIN 531
+ M++ G P+ S LI L + M E ++N
Sbjct: 541 FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLN 578
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 170/333 (51%), Gaps = 22/333 (6%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
+C+EGR+ EA + L M G + T++ ++ C+ + A LL++M+ KGFSPS
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VVT+N L+ CR+ + +A+ IL M + G P+ SYN ++ FC
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
V +G +PD TY++++ ALC + ++ +A ++ ++ G SP +TY +++ G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ KA L DEM K PD +TY++L+ GL +V+EA++ MG+
Sbjct: 464 KTGKAIKLLDEMRAKDLKPD--------TITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
PNAV++++++ G C+ + +A + + ++ +E +Y L++ L+Y
Sbjct: 516 RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP-NETSYTILIEGLAY-------- 566
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 384
EG + AL+L +++ G + A V
Sbjct: 567 -----EGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 129/281 (45%), Gaps = 14/281 (4%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L+ +C GR +AE++L M KG T++ +I + C + A +L +M G
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P+ ++YN L+ +C+ +D+A+ L M RG PD+ +YN +++ C
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
KG P TY+++++ L + +A L EM + PD +TY+ L+
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 229 LVG---EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 285
G E K FH + M G P VT+N+++ GLC + + A++ L
Sbjct: 496 REGKVDEAIKFFHEFERM-----------GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 544
Query: 286 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAI 326
M G PN SY+ +I G G +A EL E +K +
Sbjct: 545 MINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 164/323 (50%), Gaps = 22/323 (6%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
D T S++ FC N++ A +L+ +M+ G+ P +V YN+++ + C+ V+ A
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 213
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 195
+ + +G+ P+V +Y +++ C + K I P+ TYS+L++A
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 273
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
++ EA +LF EM+R + PD +TY+ L+N CL +A + D M+ KG L D
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD---- 329
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
+V+YN LI+G C RVE+ +++ R M + GL N V+Y+T+I GF Q G++ KA
Sbjct: 330 ----VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 316 ELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 375
E + + + + D + TY+ ++ G +++AL + DM +
Sbjct: 386 EFFSQMD---FFGISPDIW-----------TYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 376 LSSYVAYSVLINGLHKKARTREA 398
V Y+ +I G+ K + EA
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEA 454
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 201/451 (44%), Gaps = 60/451 (13%)
Query: 92 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 151
K++ A L S+M+ PS+V +N L+ A + D + + + M G+ D+ ++N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 152 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 211
VI+ FC + G PD T SL+ C R+S+A L +M+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 212 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 271
G PD + Y ++++ C AF E+ KG P+ +VTY AL++GLC
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN--------VVTYTALVNGLC 236
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDE 331
R +A +L M + ++PN ++YS ++ F + G++ +A EL E+ +D
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL---FEEMVRMSIDP 293
Query: 332 D--TYDSLMDSLSYED----------------------TYSSVMNDYLAEGNMQRALQLD 367
D TY SL++ L D +Y++++N + ++ ++L
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 368 HDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-C 426
+MS+ G +S+ V Y+ LI G + +A+ + D F P Y+ILL C
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE--FFSQMDFFGISPDIWTYNILLGGLC 411
Query: 427 SNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSH 486
N E + + + +D R++ D T +TT++ GM C++
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVT-YTTVIR-------------GM--------CKTG 449
Query: 487 NVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
V +A++++ + G P + + ++S L
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 138/266 (51%), Gaps = 8/266 (3%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ R+ +A + ++ KG+ + TY++++ CN ++ A LLS+MI K +P+
Sbjct: 200 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 259
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V+TY++L+ A+ + V +A + M + PD+ +Y+ +I+ C
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
V KG D +Y++L+ C +R+ + LFREM + G+ + +TY L+ G
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ KA +M DF G SP I TYN L+ GLC +E+AL I M + +
Sbjct: 380 DVDKAQEFFSQM-------DFF-GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 292 SPNAVSYSTVISGFCQIGELGKAYEL 317
+ V+Y+TVI G C+ G++ +A+ L
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSL 457
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 151/348 (43%), Gaps = 22/348 (6%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
CR R+ +A +++ M G D Y+++I C +++ A E+ KG P+
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VVTY +LV C A +L M ++ ++P+V +Y+ ++ F
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
V I PD TYSSL+ LC+ R+ EA +F M+ G D ++Y L+N C
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
L EM +G + + VTYN LI G V++A E M G+
Sbjct: 345 RVEDGMKLFREMSQRGLVSN--------TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
SP+ +Y+ ++ G C GEL KA + ED +D D TY++V+
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKAL---VIFEDMQKREMDLDIV-----------TYTTVI 442
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 399
G ++ A L +S G V Y+ +++GL K E +
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 135/294 (45%), Gaps = 19/294 (6%)
Query: 17 NVNIYNGMIRGFATAAGKSDSE-------SKKVGEAFQS----LKRLCREGRIPEAEQML 65
NV Y ++ G ++ SD+ KK+ + L + G++ EA+++
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
E M + D TYSS+I C ++ID A+ + M++KG VV+YN+L+ +C+
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
V+ + + R M++RGL + +YN +I F GI PD TY
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Query: 186 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
+ L+ LC L +A +F +M + + D +TYT ++ C G+ +A+ L +
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 463
Query: 246 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYS 299
KG PD IVTY ++ GLC + E + M + GL N + S
Sbjct: 464 KGLKPD--------IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 218/485 (44%), Gaps = 40/485 (8%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C RI EA +++ M G + T++++I NK A L+ M+AKG P +
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
VTY +V C+R D A +L M + L P V YN +I C
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
KGI P+ TYSSL+ LC R S+A L +M+ ++PD T++ L++A G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
+A L+DEM+ + P+IVTY++LI+G C DR++EA ++ M
Sbjct: 342 LVEAEKLYDEMVKR--------SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 293 PNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMN 352
P+ V+Y+T+I GFC+ + + E+ E + + + TY+ ++
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL--------------VGNTVTYNILIQ 439
Query: 353 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 412
G+ A ++ +M DG + + Y+ L++GL K + +A Y+
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM-- 497
Query: 413 MPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH------LKNKTD 465
P+ Y+I++E C + + +L + S++ + D A+ TM+ K + D
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD-VVAYNTMISGFCRKGSKEEAD 556
Query: 466 G---ENKTDG-----GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
E K DG G YN LI R + + + EM G A ++ + + L
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
Query: 518 DDDRM 522
D R+
Sbjct: 617 HDGRL 621
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/516 (25%), Positives = 224/516 (43%), Gaps = 58/516 (11%)
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
E M+ G+ + TYS +I FC +++ A +L +M+ G+ P++VT +SL+ YC
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
+ +AV ++ M G P+ ++N +I V KG PD TY
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 186 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
++ LC AF+L +M +G + P L Y +++ C A +L EM
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 246 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
KG P+ +VTY++LI LC R +A +L M E ++P+ ++S +I F
Sbjct: 285 KGIRPN--------VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 306 CQIGELGKAYELKIETEDKAIWWLDED--TYDSLMDSLSYED------------------ 345
+ G+L +A +L E ++I D TY SL++ D
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSI---DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 346 ----TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRD 401
TY++++ + ++ +++ +MS+ G + + V Y++LI GL + A+
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 402 LLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHL 460
+ SDG P+ Y+ LL+ C N + + + +V +Y R + + M+
Sbjct: 454 FKEMVSDGV--PPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 461 KNKT----DGEN----------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPH 506
K DG + K D YN +I CR + +A ++ EM G P+
Sbjct: 511 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Query: 507 MFSVLALISA--LDDDRMYNEMSWVINNTLRSCNLS 540
LI A D DR E S + +RSC +
Sbjct: 571 SGCYNTLIRARLRDGDR---EASAELIKEMRSCGFA 603
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 168/366 (45%), Gaps = 41/366 (11%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ + +A + + M+ KG+ + TYSS+I CN + A LLS+MI + +P
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V T+++L+ A+ + + +A + M +R + P + +Y+ +I+ FC
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
V K FPD TY++L++ C +R+ E ++FREM + G+ + +TY L+ G
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 232 EFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYN 264
+ A + EM+ G P+ +T P I TYN
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
+I G+C +VE+ ++ + G+ P+ V+Y+T+ISGFC+ G E D
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK--------EEADA 557
Query: 325 AIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 384
+ ED +L Y++++ L +G+ + + +L +M G+ +
Sbjct: 558 LFKEMKED------GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 611
Query: 385 LINGLH 390
+ N LH
Sbjct: 612 VTNMLH 617
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 196/439 (44%), Gaps = 47/439 (10%)
Query: 80 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 139
+S ++ +NK D +L +M G + TY+ L+ +CRR + A+ +L M
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 140 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 199
+ G P++ + + +++ +C G P+ T+++L+ L + + S
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 259
EA L M+ G PD +TY ++N C G+ AF+L ++M +G L P
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKL-------EPG 255
Query: 260 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKI 319
++ YN +I GLC +++AL + + M G+ PN V+YS++IS C G A L
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 320 ETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 379
+ ++ I + D + T+S++++ ++ EG + A +L +M + S
Sbjct: 316 DMIERKI---NPDVF-----------TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 380 VAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELV 438
V YS LING R EAK+ ++ S P Y+ L++ C + +E+
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKH--CFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 439 KDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 498
++ S R L + T YN+LI ++ + A ++ EM
Sbjct: 420 REMSQRGLVGNTVT----------------------YNILIQGLFQAGDCDMAQEIFKEM 457
Query: 499 VHYGHAPHMFSVLALISAL 517
V G P++ + L+ L
Sbjct: 458 VSDGVPPNIMTYNTLLDGL 476
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 217/490 (44%), Gaps = 48/490 (9%)
Query: 68 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 127
M+ KG+ T S +I FC K+ A + + +++ G+ P V +N+L+ C
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 128 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 187
V +A+ ++ M E G P + + N +++ C V+ G P+ TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 188 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 247
++ +C + + A +L R+M + D + Y+ +++ C G AF+L +EM KG
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 248 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQ 307
F D I+TYN LI G C R ++ ++LR M + +SPN V++S +I F +
Sbjct: 294 FKAD--------IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 308 IGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED---------------------- 345
G+L +A +L E + I + TY+SL+D E+
Sbjct: 346 EGKLREADQLLKEMMQRGIAP-NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 346 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 405
T++ ++N Y + L+L +MS G +++ V Y+ L+ G + + AK+ +
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 406 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 464
S P Y ILL+ C N E + +E+ + D + + N +
Sbjct: 465 VSRRV--RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 465 DGEN-------------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 511
++ K D YN++I E CR ++ KA ++ +M GHAP +
Sbjct: 523 KVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYN 582
Query: 512 ALISA-LDDD 520
LI A L DD
Sbjct: 583 ILIRAHLGDD 592
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 162/335 (48%), Gaps = 22/335 (6%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC++G + A + M+ KG D TY+++IG FCN + D LL +MI + SP+
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VVT++ L+ ++ + + +A +L+ M +RG++P+ +YN +I FC
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ KG PD T++ L+ C R+ + +LFREM GV + +TY L+ C G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ A L EM+ + PD IV+Y L+ GLC +E+ALEI + + +
Sbjct: 453 KLEVAKKLFQEMVSRRVRPD--------IVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
+ Y +I G C ++ A++L K + LD Y+ ++ L +D+ S
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV-KLDARAYNIMISELCRKDSLS--- 560
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 386
+A L M+ +G+ + Y++LI
Sbjct: 561 ----------KADILFRKMTEEGHAPDELTYNILI 585
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 218/484 (45%), Gaps = 38/484 (7%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C RI +A +++ M G D T++++I NK A L+ +M+ +G P +
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
VTY ++V C+R +D A+ +L+ M + + DV YN +I C
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE 283
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
+KGI PD TYSSL+ LC R S+A L +M+ ++P+ +T++ L++A G+
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
+A L+DEMI + PD I TY++LI+G C DR++EA + M
Sbjct: 344 LVEAEKLYDEMIKRSIDPD--------IFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 293 PNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMN 352
PN V+YST+I GFC+ + + EL E + + + TY+++++
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL--------------VGNTVTYTTLIH 441
Query: 353 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 412
+ + A + M G + + Y++L++GL K + +A Y+
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM-- 499
Query: 413 MPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN--- 468
P Y+I++E C + + EL + S++ +S + +T + K E
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 469 -----KTDG-----GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALD 518
K DG G YN LI R + + + EM G A ++ + + L
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 619
Query: 519 DDRM 522
D R+
Sbjct: 620 DGRL 623
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 172/366 (46%), Gaps = 41/366 (11%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ + +A + M KG+ D TYSS+I CN + A LLS+MI + +P+
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VVT+++L+ A+ + + +A + M +R + PD+ +Y+ +I+ FC
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ K FP+ TYS+L++ C +R+ E +LFREM + G+ + +TYT L++
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 232 EFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYN 264
+ A + +M+ G P+ +T P I TYN
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
+I G+C +VE+ E+ + G+SPN ++Y+T+ISGFC+ G E D
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK--------EEADS 559
Query: 325 AIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 384
+ + ED L TY++++ L +G+ + + +L +M G+ +
Sbjct: 560 LLKKMKED------GPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 613
Query: 385 LINGLH 390
+ N LH
Sbjct: 614 VTNMLH 619
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 207/477 (43%), Gaps = 60/477 (12%)
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
E M+ G+ D TYS I FC +++ A +L++M+ G+ P +VT +SL+ YC
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
+ AV ++ M E G PD ++ +I V +G PD TY
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 186 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
+++ LC + A L ++M +G + D + Y +++ C A +L EM +
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 246 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
KG PD + TY++LI LC R +A +L M E ++PN V++S +I F
Sbjct: 287 KGIRPD--------VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 306 CQIGELGKAYELKIETEDKAIWWLDED--TYDSLMDSLSYED------------------ 345
+ G+L +A +L E ++I D D TY SL++ D
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSI---DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 346 ----TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRD 401
TYS+++ + ++ ++L +MS+ G + + V Y+ LI+G + A+
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 402 LLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHL 460
+ S G P+ Y+ILL+ C N + A A +L
Sbjct: 456 FKQMVSVGV--HPNILTYNILLDGLCKNGKL-------------------AKAMVVFEYL 494
Query: 461 KNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
+ T + D YN++I C++ V + ++ + G +P++ + +IS
Sbjct: 495 QRST---MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 192/415 (46%), Gaps = 45/415 (10%)
Query: 77 ERTYSSVIGWF--------CNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 128
ER+++S G + ++ K+D A L +M+ PS+V +N L+ A + +
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 129 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 188
+ + + M G+S D+ +Y+ I+ FC + G PD T SSL
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 189 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 248
+ C +R+S+A L +M+ G PD T+T L++ L + ++A L D+M+ +G
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 249 LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQI 308
PD +VTY +++GLC ++ AL +L+ M + + + V Y+T+I G C+
Sbjct: 220 QPD--------LVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 309 GELGKAYELKIETEDKAIWWLDEDTYDSLMDSL----SYED------------------T 346
+ A L E ++K I D TY SL+ L + D T
Sbjct: 272 KHMDDALNLFTEMDNKGIRP-DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 347 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL-LYI 405
+S++++ ++ EG + A +L +M + YS LING R EAK L I
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 406 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH 459
+ D F P+ Y L++ C + +EL ++ S R L + T +TT++H
Sbjct: 391 SKDCF---PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT-YTTLIH 441
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K C+ R+ E ++ M +GL + TY+++I F D+A + +M++ G
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P+++TYN L+ C+ + KA+ + + + PD+ +YN +I C
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
KG+ P+ Y++++ C + EA L ++M G P+ TY L+ A
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL 584
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVT 254
G+ + L EM GF D T
Sbjct: 585 RDGDREASAELIKEMRSCGFAGDAST 610
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/440 (20%), Positives = 160/440 (36%), Gaps = 129/440 (29%)
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVS---------------------PDEL 218
P ++ +L + C E+ + A +RE+LR +S P +
Sbjct: 25 PTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIV 84
Query: 219 TYTRLLNACCLVGEFTKAFHL----------HD-------------------------EM 243
+ +LL+A + +F L HD +M
Sbjct: 85 EFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKM 144
Query: 244 IHKGFLPDFVT---------------------------GFSPAIVTYNALIHGLCFLDRV 276
+ G+ PD VT G+ P T+ LIHGL ++
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 277 EEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDS 336
EA+ ++ M + G P+ V+Y TV++G C+ G++ A L ++ +K D Y++
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL-LKKMEKGKIEADVVIYNT 263
Query: 337 LMDSL-SYED---------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDG 374
++D L Y+ TYSS+++ G A +L DM
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 375 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSL 434
+ V +S LI+ K+ + EA++ +YD +++ + + +
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEK-----------------LYDEMIKRSIDPDIFTY 366
Query: 435 VELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNM 494
L+ + M D D+A M+ +K N Y+ LI C++ V + +
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMI---SKDCFPNVV---TYSTLIKGFCKAKRVEEGMEL 420
Query: 495 YMEMVHYGHAPHMFSVLALI 514
+ EM G + + LI
Sbjct: 421 FREMSQRGLVGNTVTYTTLI 440
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 210/469 (44%), Gaps = 45/469 (9%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K L EG++ EA +++ M G D TY+S++ C A LL +M +
Sbjct: 165 IKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV 224
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
V TY++++ + CR +D A+ + + M +G+ V +YN ++ C
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
V + I P+ T++ L++ E +L EA +L++EM+ G+SP+ +TY L++ C
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
+ ++A ++ D M+ PD IVT+ +LI G C + RV++ +++ R + +
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPD--------IVTFTSLIKGYCMVKRVDDGMKVFRNISK 396
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
GL NAV+YS ++ GFCQ G++ A EL E + D TY L+D L
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP-DVMTYGILLDGLC------ 449
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD 408
G +++AL++ D+ + V Y+ +I G+ K + +A +
Sbjct: 450 -------DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 409 GFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN 468
G P+ Y +++ L + + +L K + DG N
Sbjct: 503 GV--KPNVMTYTVMISG--------------------LCKKGSLSEANILLRKMEEDG-N 539
Query: 469 KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
+ YN LI H R ++ + + EM G + S+ +I L
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 201/444 (45%), Gaps = 55/444 (12%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
T + +I FC K A+++L +++ G+ P T+N+L+ V +AV ++ M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
E G PDV +YN +++ C ++ + D TYS+++++LC + +
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 258
A LF+EM G+ +TY L+ C G++ L +M+ + +P+
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN------- 297
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELK 318
++T+N L+ +++EA E+ + M G+SPN ++Y+T++ G+C L +A
Sbjct: 298 -VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA---- 352
Query: 319 IETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 376
+ D ++ + D T++S++ Y + +++ ++S+ G +
Sbjct: 353 ------------NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 377 SSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLV 435
++ V YS+L+ G + + + A+ + S G L P Y ILL+ C N + + +
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL--PDVMTYGILLDGLCDNGKLEKAL 458
Query: 436 ELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGG--MYNLLIFEHCRSHNVHKAYN 493
E+ +D ++K D G MY +I C+ V A+N
Sbjct: 459 EIFEDLQ------------------------KSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 494 MYMEMVHYGHAPHMFSVLALISAL 517
++ + G P++ + +IS L
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGL 518
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 160/403 (39%), Gaps = 92/403 (22%)
Query: 194 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 253
V+ + +A LF+EM+R P + ++R +A +F ++ G +
Sbjct: 65 VDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIY 124
Query: 254 T---------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGM 286
T G+ P T+N LI GL +V EA+ ++ M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 287 PEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDT 346
E G P+ V+Y+++++G C+ G+ A +L + E++ + D + T
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV---KADVF-----------T 230
Query: 347 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 406
YS++++ +G + A+ L +M G SS V Y+ L+ GL K + + L +
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 407 SDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM-------- 457
S + P+ +++LL+ + + EL K+ R +S + T +T M
Sbjct: 291 SREIV--PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 458 ---------LHLKNKTDGE--------------NKTDGGM-----------------YNL 477
L ++NK + + D GM Y++
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 478 LIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDD 520
L+ C+S + A ++ EMV +G P + + L+ L D+
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 209/465 (44%), Gaps = 40/465 (8%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L C RI +A ++ M G D T++++I N+ A L+ M+ KG
Sbjct: 158 LNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGC 217
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P +VTY +V C+R +D A+ +L+ M + + P V YN +I C
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+KGI P+ TY+SL+ LC R S+A L +M+ ++P+ +T++ L++A
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G+ +A L+DEMI + PD I TY++LI+G C DR++EA + M
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPD--------IFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
PN V+Y+T+I GFC+ + + EL E + + + TY+
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL--------------VGNTVTYT 435
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD 408
++++ + A + M DG L + YS+L++GL + A Y+
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 409 GFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH------LK 461
P Y+I++E C + + +L S++ + + T +TTM+ LK
Sbjct: 496 KM--EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT-YTTMMSGFCRKGLK 552
Query: 462 NKTDG---ENKTDG-----GMYNLLIFEHCRSHNVHKAYNMYMEM 498
+ D E K +G G YN LI H R + + + EM
Sbjct: 553 EEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 194/433 (44%), Gaps = 36/433 (8%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L R R EA +++ M KG D TY V+ C ID A +LL +M P
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VV YN+++ A C +V+ A+ + M +G+ P+V +YN +I C
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+++ I P+ T+S+L++A E +L EA L+ EM++ + PD TY+ L+N C+
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+A H+ + MI K P+ +VTYN LI G C RV+E +E+ R M + GL
Sbjct: 376 RLDEAKHMFELMISKDCFPN--------VVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED------ 345
N V+Y+T+I GF Q E A + + + D TY L+D L
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP-DIMTYSILLDGLCNNGKVETAL 486
Query: 346 ----------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 389
TY+ ++ G ++ L +S G + V Y+ +++G
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546
Query: 390 HKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMRDLSD 448
+K EA + +G +P Y+ L+ + + + + EL+++
Sbjct: 547 CRKGLKEEADALFREMKEEG--PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 604
Query: 449 DAATAH--TTMLH 459
DA+T T MLH
Sbjct: 605 DASTIGLVTNMLH 617
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/528 (23%), Positives = 227/528 (42%), Gaps = 60/528 (11%)
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
E M+ G+ + TYS +I FC +++ A +L++M+ G+ P +VT NSL+ +C
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHG 164
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
+ + AV ++ M E G PD ++N +I V KG PD TY
Sbjct: 165 NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 186 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
++ LC + A L ++M +G + P + Y +++A C A +L EM +
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 246 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
KG P+ +VTYN+LI LC R +A +L M E ++PN V++S +I F
Sbjct: 285 KGIRPN--------VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 306 CQIGELGKAYELKIETEDKAIWWLDED--TYDSLMDSLSYED------------------ 345
+ G+L +A +L E ++I D D TY SL++ D
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSI---DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 346 ----TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRD 401
TY++++ + + ++L +MS+ G + + V Y+ LI+G + A+
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 402 LLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHL 460
+ SDG L P Y ILL+ C+N + ++ + + + + D T
Sbjct: 454 FKQMVSDGVL--PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT-------- 503
Query: 461 KNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDD 520
YN++I C++ V ++++ + G P++ + ++S
Sbjct: 504 --------------YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 521 RMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEM 568
+ E + L DS L ++ + A +++ EM
Sbjct: 550 GLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 164/347 (47%), Gaps = 23/347 (6%)
Query: 45 AFQSLKR-LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 103
+ SL R LC GR +A ++L M + + + T+S++I F K+ A L EM
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 104 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 163
I + P + TY+SL+ +C D +D+A + M + P+V +YN +I FC
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 164 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 223
+G+ + TY++L+ + A +F++M+ GV PD +TY+ L
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 224 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 283
L+ C G+ A + + + PD I TYN +I G+C +VE+ ++
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPD--------IYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 284 RGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSY 343
+ G+ PN V+Y+T++SGFC+ G +A L E +++ L DS
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG----------PLPDS--- 571
Query: 344 EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 390
TY++++ +L +G+ + +L +M ++ ++ N LH
Sbjct: 572 -GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLH 617
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 145/366 (39%), Gaps = 89/366 (24%)
Query: 179 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 238
FP +S L+ A+ + L +M G+S + TY+ L+N C + + A
Sbjct: 78 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALA 137
Query: 239 LHDEMIHKGFLPDFVT---------------------------GFSPAIVTYNALIHGLC 271
+ +M+ G+ PD VT G+ P T+N LIHGL
Sbjct: 138 VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL-------KIE---- 320
+R EA+ ++ M G P+ V+Y V++G C+ G++ A L KIE
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 321 --------------TEDKAIWWLDED---------TYDSLMDSL----SYED-------- 345
D + + D TY+SL+ L + D
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 346 ----------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKART 395
T+S++++ ++ EG + A +L +M + YS LING R
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 396 REAKRDL-LYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATA 453
EAK L I+ D F P+ Y+ L++ C +EL ++ S R L + T
Sbjct: 378 DEAKHMFELMISKDCF---PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT- 433
Query: 454 HTTMLH 459
+TT++H
Sbjct: 434 YTTLIH 439
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 211/488 (43%), Gaps = 54/488 (11%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ + EAE + + M GL ++ TYS +I FC K+D+A + L EM+ G S
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V YNSL+ +C+ + A G + M + L P V +Y ++ +C
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
KGI P T+++L+ L + +A LF EM V P+ +TY ++ C G
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG 556
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ +KAF EM KG +PD +Y LIHGLC + EA + G+ +
Sbjct: 557 DMSKAFEFLKEMTEKGIVPD--------TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMD-SLSYED----- 345
N + Y+ ++ GFC+ G+L +A + E + + LD Y L+D SL ++D
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD-LDLVCYGVLIDGSLKHKDRKLFF 667
Query: 346 ----------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 389
Y+S+++ G+ + A + M +G + + V Y+ +INGL
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 390 HKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDD 449
K EA ++L S+P+ Y L+ + E V++ K + +
Sbjct: 728 CKAGFVNEA--EVLCSKMQPVSSVPNQVTYGCFLDILTKGE----VDMQKAVELHNAILK 781
Query: 450 AATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFS 509
A+T YN+LI CR + +A + M+ G +P +
Sbjct: 782 GLLANT-----------------ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCIT 824
Query: 510 VLALISAL 517
+I+ L
Sbjct: 825 YTTMINEL 832
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 199/481 (41%), Gaps = 64/481 (13%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C+ G I AE + M K L TY+S++G +C+ KI+ A L EM KG +PS+
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
T+ +L+ R + AV + MAE + P+ +YN +I +C
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
+KGI PD +Y L+ LC+ + SEA + +G +E+ YT LL+ C G+
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 233 FTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYNA 265
+A + EM+ +G D V G P V Y +
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS 687
Query: 266 LIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKA 325
+I +EA I M G PN V+Y+ VI+G C+ G + +A E+
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA-EVLCSKMQPV 746
Query: 326 IWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 385
++ TY +D L+ E +MQ+A++L H+ G L++ Y++L
Sbjct: 747 SSVPNQVTYGCFLDILTK------------GEVDMQKAVEL-HNAILKGLLANTATYNML 793
Query: 386 INGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRD 445
I G ++ R EA + + DG +S T ++ E C ++ K +EL + +
Sbjct: 794 IRGFCRQGRIEEASELITRMIGDG-VSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 852
Query: 446 LSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 505
+ D YN LI C + + KA + EM+ G P
Sbjct: 853 IRPDRVA----------------------YNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Query: 506 H 506
+
Sbjct: 891 N 891
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 206/457 (45%), Gaps = 40/457 (8%)
Query: 61 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 120
A ++ M G+ D Y+ VI C L + A +++ M A G ++V YN L+
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 121 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 180
C++ V +AVGI + +A + L PDV +Y ++ C + P
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
A SSL+E L ++ EA +L + ++ GVSP+ Y L+++ C +F +A L
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
D M G P VTY+ LI C +++ AL L M + GL + Y++
Sbjct: 391 DRMGK--------IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 301 VISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM 360
+I+G C+ G++ A E +K + E T TY+S+M Y ++G +
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKL----EPTV----------VTYTSLMGGYCSKGKI 488
Query: 361 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYD 420
+AL+L H+M+ G S ++ L++GL + R+A + L+ + P+ Y+
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK--LFNEMAEWNVKPNRVTYN 546
Query: 421 ILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH----------LKNKTDGENK 469
+++E C + E +K+ + + + D + + ++H K DG +K
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS-YRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 470 TDGGM----YNLLIFEHCRSHNVHKAYNMYMEMVHYG 502
+ + Y L+ CR + +A ++ EMV G
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 193/459 (42%), Gaps = 69/459 (15%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ +M++ M C E SS++ KI+ A L+ ++ G SP+
Sbjct: 307 LCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPN 366
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+ YN+L+ + C+ +A + M + GL P+ +Y+ +I FC
Sbjct: 367 LFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLG 426
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
VD G+ Y+SL+ C +S A EM+ + P +TYT L+ C G
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG 486
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ KA L+ EM K G +P+I T+ L+ GL + +A+++ M E +
Sbjct: 487 KINKALRLYHEMTGK--------GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSY-------- 343
PN V+Y+ +I G+C+ G++ KA+E E +K I D +Y L+ L
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP-DTYSYRPLIHGLCLTGQASEAK 597
Query: 344 --------------EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 389
E Y+ +++ + EG ++ AL + +M + G V Y VLI+G
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG- 656
Query: 390 HKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDD 449
+ R L + L+K+ R L D
Sbjct: 657 ----SLKHKDRKLFF-------------------------------GLLKEMHDRGLKPD 681
Query: 450 AATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNV 488
+T+M+ K+KT G+ K G+++L+I E C + V
Sbjct: 682 DVI-YTSMIDAKSKT-GDFKEAFGIWDLMINEGCVPNEV 718
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 169/379 (44%), Gaps = 53/379 (13%)
Query: 21 YNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIP-------------------EA 61
YN MI G+ E + +AF+ LK + +G +P EA
Sbjct: 545 YNVMIEGYC--------EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
+ ++ + L+E Y+ ++ FC K++ A ++ EM+ +G +V Y L+
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 181
+ G+L+ M +RGL PD Y +I +++G P+
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE--FTKAFHL 239
TY++++ LC ++EA L +M P+++TY L+ GE KA L
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDI-LTKGEVDMQKAVEL 775
Query: 240 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYS 299
H+ ++ KG L + TYN LI G C R+EEA E++ M G+SP+ ++Y+
Sbjct: 776 HNAIL-KGLLAN--------TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYT 826
Query: 300 TVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGN 359
T+I+ C+ ++ KA EL +K I D ++ Y+++++ G
Sbjct: 827 TMINELCRRNDVKKAIELWNSMTEKGIR----------PDRVA----YNTLIHGCCVAGE 872
Query: 360 MQRALQLDHDMSRDGYLSS 378
M +A +L ++M R G + +
Sbjct: 873 MGKATELRNEMLRQGLIPN 891
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 113/290 (38%), Gaps = 43/290 (14%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L CREG++ EA + + M +G+ LD Y +I LL EM +G
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXX-------- 160
P V Y S++ A + +A GI M G P+ +Y VI+ C
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738
Query: 161 ---------------------------XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 193
+ KG+ + ATY+ L+ C
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFC 798
Query: 194 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 253
+ R+ EA +L M+ GVSPD +TYT ++N C + KA L + M KG PD V
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRV 858
Query: 254 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVIS 303
YN LIHG C + +A E+ M GL PN + T S
Sbjct: 859 A--------YNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 161/376 (42%), Gaps = 52/376 (13%)
Query: 178 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 237
+ P+ T S+L+ L + A +LF +M+ G+ PD YT ++ + C + + ++A
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAK 247
Query: 238 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVS 297
+ M TG IV YN LI GLC +V EA+ I + + L P+ V+
Sbjct: 248 EMIAHM--------EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVT 299
Query: 298 YSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAE 357
Y T++ G C++ E +E+ +E D+ + L S S E SS++
Sbjct: 300 YCTLVYGLCKVQE----FEIGLEMMDEML---------CLRFSPS-EAAVSSLVEGLRKR 345
Query: 358 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 417
G ++ AL L + G + Y+ LI+ L K + EA +LL+ P+
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA--ELLFDRMGKIGLRPNDV 403
Query: 418 VYDILLEN-CSNSEFKSLVELVKD----------YSMRDLSD------DAATAHTTMLHL 460
Y IL++ C + + + + + Y L + D + A M +
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463
Query: 461 KNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL--- 517
NK Y L+ +C ++KA +Y EM G AP +++ L+S L
Sbjct: 464 INKKLEPTVV---TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Query: 518 ----DDDRMYNEMS-W 528
D +++NEM+ W
Sbjct: 521 GLIRDAVKLFNEMAEW 536
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 206/465 (44%), Gaps = 40/465 (8%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L C RI EA +++ M G D T+++++ NK A L+ M+ KG
Sbjct: 142 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 201
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P +VTY +++ C+R D A+ +L M + + DV Y+ VI C
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+KGI PD TYSSL+ LC R S+A L +ML ++P+ +T+ L++A
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G+ +A L DEMI + P IVTYN+LI+G C DR++EA +I M
Sbjct: 322 KEGKLIEAEKLFDEMIQR--------SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
P+ V+Y+T+I+GFC+ ++ EL + + + + TY+
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL--------------VGNTVTYT 419
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD 408
++++ + + A + M DG + + Y+ L++GL K + +A Y+
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 409 GFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM---------- 457
P Y+I+ E C + + +L S++ + D +T +
Sbjct: 480 KM--EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
Query: 458 ----LHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 498
L +K K DG D G YN LI H R + + + EM
Sbjct: 538 EAYTLFIKMKEDGP-LPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 202/433 (46%), Gaps = 36/433 (8%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L + + EA ++E M KG D TY +VI C + D A LL++M
Sbjct: 180 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 239
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VV Y++++ + C+ VD A+ + M +G+ PDV +Y+ +IS C
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+++ I P+ T++SL++A E +L EA LF EM++ + P+ +TY L+N C+
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+A + M+ K LPD +VTYN LI+G C +V + +E+ R M GL
Sbjct: 360 RLDEAQQIFTLMVSKDCLPD--------VVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYE------- 344
N V+Y+T+I GF Q + A + + + + TY++L+D L
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP-NIMTYNTLLDGLCKNGKLEKAM 470
Query: 345 -------------DTYS-SVMNDYLAE-GNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 389
D Y+ ++M++ + + G ++ L +S G +AY+ +I+G
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Query: 390 HKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMRDLSD 448
KK EA + + DG +P Y+ L+ + + + + EL+K+ +
Sbjct: 531 CKKGLKEEAYTLFIKMKEDG--PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAG 588
Query: 449 DAATAH--TTMLH 459
DA+T T MLH
Sbjct: 589 DASTYGLVTDMLH 601
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 217/489 (44%), Gaps = 51/489 (10%)
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
E M+ G+ + TY+ +I C +++ A +L +M+ G+ PS+VT NSL+ +C
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
+ + +AV ++ M E G PD ++ ++ V KG PD TY
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 186 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
+++ LC A +L +M +G + D + Y+ ++++ C A +L EM +
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 246 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
KG PD + TY++LI LC R +A +L M E ++PN V+++++I F
Sbjct: 269 KGIRPD--------VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 306 CQIGELGKAYELKIETEDKAIWWLDED--TYDSLMDSLSYED------------------ 345
+ G+L +A +L E ++I D + TY+SL++ D
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSI---DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Query: 346 ----TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRD 401
TY++++N + + ++L DMSR G + + V Y+ LI+G + + A+
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 402 LLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTT---M 457
+ SDG P+ Y+ LL+ C N + + + + + + D T + M
Sbjct: 438 FKQMVSDGV--HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 458 LHLKNKTDGEN----------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM 507
DG + K D YN +I C+ +AY ++++M G P
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDS 555
Query: 508 FSVLALISA 516
+ LI A
Sbjct: 556 GTYNTLIRA 564
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 151/379 (39%), Gaps = 61/379 (16%)
Query: 179 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 238
FP +S L+ A+ ++ +M GVS + TY ++N C + + A
Sbjct: 62 FPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALA 121
Query: 239 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSY 298
+ +M+ G+ P+IVT N+L++G C +R+ EA+ ++ M EMG P+ V++
Sbjct: 122 ILGKMMK--------LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTF 173
Query: 299 STVISGFCQIGELGKAYELKIETEDKAIWWLDED--TYDSLMDSLSYED----------- 345
+T++ G Q + +A L E + D TY ++++ L
Sbjct: 174 TTLVHGLFQHNKASEAVAL---VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 230
Query: 346 -----------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR 394
YS+V++ ++ AL L +M G YS LI+ L R
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290
Query: 395 TREAKR---DLL----------------YIASDGFLSMPSYTVYDILLENCSNSEFKSLV 435
+A R D+L A +G L + + ++D +++ + +
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL-IEAEKLFDEMIQRSIDPNIVTYN 349
Query: 436 ELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMY 495
L+ + M D D+A T M+ + D YN LI C++ V ++
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMV------SKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 496 MEMVHYGHAPHMFSVLALI 514
+M G + + LI
Sbjct: 404 RDMSRRGLVGNTVTYTTLI 422
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 144/365 (39%), Gaps = 88/365 (24%)
Query: 176 KGIFPDAATYSSLMEALC----VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+GI+ +Y E L + +L EA DLF EM++ P + +++LL+A +
Sbjct: 20 RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK 79
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+F ++M + G S + TYN +I+ LC ++ AL IL M ++G
Sbjct: 80 KFDLVISFGEKME--------ILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGY 131
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
P+ V T +S++
Sbjct: 132 GPSIV-------------------------------------------------TLNSLL 142
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
N + + A+ L M GY V ++ L++GL + + EA + + G
Sbjct: 143 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-- 200
Query: 412 SMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD-GENK 469
P Y ++ C E DL+ L+L NK + G+ +
Sbjct: 201 CQPDLVTYGAVINGLCKRGE-------------PDLA----------LNLLNKMEKGKIE 237
Query: 470 TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWV 529
D +Y+ +I C+ +V A N++ EM + G P +F+ +LIS L + +++ S +
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297
Query: 530 INNTL 534
+++ L
Sbjct: 298 LSDML 302
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 207/447 (46%), Gaps = 48/447 (10%)
Query: 75 LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 134
LD ++ +I C +I+ + LL E+ GFSP+VV Y +L+ C++ ++KA +
Sbjct: 161 LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 135 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 194
M + GL + +Y +I+ + G+FP+ TY+ +M LC
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280
Query: 195 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 254
+ R +AF +F EM GVS + +TY L+ C + +A + D+M
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-------- 332
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
G +P ++TYN LI G C + ++ +AL + R + GLSP+ V+Y+ ++SGFC+ G+ A
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 374
++ E E++ I + TY L+D+ + D NM++A+QL M G
Sbjct: 393 AKMVKEMEERGIKP-SKVTYTILIDTFARSD-------------NMEKAIQLRLSMEELG 438
Query: 375 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYD-ILLENCSNSEFKS 433
+ YSVLI+G K + EA R + P+ +Y+ ++L C
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN--CEPNEVIYNTMILGYCKEGSSYR 496
Query: 434 LVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYN 493
++L+K+ ++L+ + A+ Y +I C+ +A
Sbjct: 497 ALKLLKEMEEKELAPNVAS----------------------YRYMIEVLCKERKSKEAER 534
Query: 494 MYMEMVHYGHAPHMFSVLALISALDDD 520
+ +M+ G P S+L+LIS +D
Sbjct: 535 LVEKMIDSGIDPST-SILSLISRAKND 560
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 135/259 (52%), Gaps = 8/259 (3%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+ +LC++GR +A Q+ + M+ +G+ + TY+++IG C K++ A+ ++ +M + G
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
+P+++TYN+L+ +C + KA+ + R + RGLSP + +YN ++S FC
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
++GI P TY+ L++ + +A L M G+ PD TY+ L++ C
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
+ G+ +A L M+ K P+ V YN +I G C AL++L+ M E
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPN--------EVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 289 MGLSPNAVSYSTVISGFCQ 307
L+PN SY +I C+
Sbjct: 507 KELAPNVASYRYMIEVLCK 525
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 133/275 (48%), Gaps = 8/275 (2%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L + G + +M E M+ G+F + TY+ V+ C + A + EM +G S +
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+VTYN+L+ CR +++A ++ M G++P++ +YN +I FC
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+G+ P TY+ L+ C + S A + +EM G+ P ++TYT L++
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
KA L M G +PD + TY+ LIHG C ++ EA + + M E
Sbjct: 423 NMEKAIQLRLSMEELGLVPD--------VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC 474
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAI 326
PN V Y+T+I G+C+ G +A +L E E+K +
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/474 (22%), Positives = 209/474 (44%), Gaps = 41/474 (8%)
Query: 78 RTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRA 137
R Y +I + ++ + + +EM+ GF P +N L+ S ++
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE 154
Query: 138 MAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQR 197
+ + DV S+ +I C + G P+ Y++L++ C +
Sbjct: 155 NKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE 213
Query: 198 LSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS 257
+ +A DLF EM + G+ +E TYT L+N G + F ++++M G P+
Sbjct: 214 IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN------ 267
Query: 258 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
+ TYN +++ LC R ++A ++ M E G+S N V+Y+T+I G C+ E+
Sbjct: 268 --LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR--------EM 317
Query: 318 KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLS 377
K+ +K + D+ D + +L TY+++++ + G + +AL L D+ G
Sbjct: 318 KLNEANKVV---DQMKSDGINPNLI---TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 378 SYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSE-FKSLVE 436
S V Y++L++G +K T A + + + G PS Y IL++ + S+ + ++
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI--KPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 437 LVKDYSMRDLSDDAATAHTTMLH--------------LKNKTDGENKTDGGMYNLLIFEH 482
L L D T ++ ++H K+ + + + +YN +I +
Sbjct: 430 LRLSMEELGLVPDVHT-YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGY 488
Query: 483 CRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRS 536
C+ + ++A + EM AP++ S +I L +R E ++ + S
Sbjct: 489 CKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 35/234 (14%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LCRE ++ EA ++++ MK G+ + TY+++I FC + K+ A +L ++ ++G SPS
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 112 VVTYNSLVFAYCRR-----------------------------------DSVDKAVGILR 136
+VTYN LV +CR+ D+++KA+ +
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 137 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 196
+M E GL PDV +Y+ +I FC V+K P+ Y++++ C E
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 250
A L +EM ++P+ +Y ++ C + +A L ++MI G P
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R + +A Q+ M+ GL D TYS +I FC +++ A L M+ K P+ V
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
YN+++ YC+ S +A+ +L+ M E+ L+P+V SY +I C
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Query: 174 VDKGIFPDAATYSSLMEA 191
+D GI P + S + A
Sbjct: 540 IDSGIDPSTSILSLISRA 557
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 205/471 (43%), Gaps = 45/471 (9%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC +GR+ EA +++ M G DE TY V+ C A L +M + S
Sbjct: 185 LCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 244
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VV Y+ ++ + C+ S D A+ + M +G+ DV +Y+ +I C
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ + I PD T+S+L++ E +L EA +L+ EM+ G++PD +TY L++ C
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+A + D M+ KG PD IVTY+ LI+ C RV++ + + R + GL
Sbjct: 365 CLHEANQMFDLMVSKGCEPD--------IVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
PN ++Y+T++ GFCQ G+L A EL E + + TY L+D L
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP-SVVTYGILLDGLC--------- 466
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
G + +AL++ M + Y+++I+G+ ++ +A ++ G
Sbjct: 467 ----DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV- 521
Query: 412 SMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTD 471
P Y++++ L + + ML K K DG D
Sbjct: 522 -KPDVVTYNVMIGG--------------------LCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 472 GGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 522
YN+LI H + + + EM G + ++ +I L D R+
Sbjct: 561 -FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRL 610
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 205/477 (42%), Gaps = 63/477 (13%)
Query: 70 CKGLFL-----DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 124
CKG+ L D T + +I +C K+ A ++L G+ P +T+++LV +C
Sbjct: 93 CKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCL 152
Query: 125 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 184
V +AV ++ M E PD+ + + +I+ C V+ G PD T
Sbjct: 153 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVT 212
Query: 185 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 244
Y ++ LC + A DLFR+M + + Y+ ++++ C G F A L +EM
Sbjct: 213 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 272
Query: 245 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISG 304
KG D +VTY++LI GLC + ++ ++LR M + P+ V++S +I
Sbjct: 273 MKGIKAD--------VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 305 FCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED------------------- 345
F + G+L +A EL E + I D TY+SL+D E+
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAP-DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 346 ---TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL 402
TYS ++N Y + ++L ++S G + + + Y+ L+ G + + AK
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 403 LYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLK 461
+ S G PS Y ILL+ C N E +E+ +
Sbjct: 444 QEMVSRGV--PPSVVTYGILLDGLCDNGELNKALEIFE---------------------- 479
Query: 462 NKTDGENKTDG-GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
K T G G+YN++I C + V A++++ + G P + + +I L
Sbjct: 480 -KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 1 MKLLRASFTAALKMALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQS------------ 48
M+L R + L N YN ++ GF +GK ++ + E
Sbjct: 405 MRLFREISSKGL--IPNTITYNTLVLGFC-QSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L LC G + +A ++ E M+ + L Y+ +I CN +K+D A +L + KG
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI 154
P VVTYN ++ C++ S+ +A + R M E G +PD +YN +I
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 141/544 (25%), Positives = 239/544 (43%), Gaps = 80/544 (14%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K LC R EA +++ M+ G+ + TY+ +I C+ K + A LL +M+ KG
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 109 SPSVVTYNSLVFAYCRR----DSVD------------------------------KAVGI 134
P+V+TYN+L+ YC+R D+VD KA+G+
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGV 449
Query: 135 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 194
L M ER + PDV +YN +I C D+G+ PD TY+S++++LC
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 195 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 254
+R+ EA DLF + + GV+P+ + YT L++ C G+ +A + ++M+ K LP+
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS-- 567
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
+T+NALIHGLC +++EA + M ++GL P + + +I + G+ A
Sbjct: 568 ------LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSR 372
Y + ++ S + D TY++ + Y EG + A + M
Sbjct: 622 Y----------------SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Query: 373 DGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFK 432
+G YS LI G +T A D+L D +T ++ K
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFA-FDVLKRMRDTGCEPSQHTFLSLI---------K 715
Query: 433 SLVELVKDYSMRDLSDDAATAHTTMLH-------LKNKTDGENKTDGGMYNLLIFEHCRS 485
L+E+ Y + S+ A + M+ L+ + + Y LI C
Sbjct: 716 HLLEM--KYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773
Query: 486 HNVHKAYNMYMEMV-HYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQ 544
N+ A ++ M + G +P AL+S + +NE + V+++ + +L E
Sbjct: 774 GNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES 833
Query: 545 LKVL 548
KVL
Sbjct: 834 CKVL 837
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 132/537 (24%), Positives = 222/537 (41%), Gaps = 105/537 (19%)
Query: 70 CKGLFLDER---TYSSVIGWFCNL-------NKIDSAHTLLSEMIAKGFSPSVVTYNSLV 119
C+ + DER Y +IG + L +D + EM+ P++ TYN +V
Sbjct: 166 CRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMV 225
Query: 120 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG-- 177
YC+ +V++A + + E GL PD +Y +I +C KG
Sbjct: 226 NGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCR 285
Query: 178 ---------------------------------IFPDAATYSSLMEALCVEQRLSEAFDL 204
FP TY+ L+++LC +R SEA +L
Sbjct: 286 RNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNL 345
Query: 205 FREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYN 264
+EM G+ P+ TYT L+++ C +F KA L +M+ KG +P+ ++TYN
Sbjct: 346 VKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN--------VITYN 397
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQ------IGELGKAYELK 318
ALI+G C +E+A++++ M LSPN +Y+ +I G+C+ +G L K E K
Sbjct: 398 ALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERK 457
Query: 319 IETEDKAIWWLDEDTYDSLMDS----------------------LSYEDTYSSVMNDYLA 356
+ D TY+SL+D + + TY+S+++
Sbjct: 458 V--------LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 357 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 416
++ A L + + G + V Y+ LI+G K + EA L + S L P+
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL--PNS 567
Query: 417 TVYDILLEN-CSNSEFK--SLVE--LVKDYSMRDLSDDAATAHTTML---------HLKN 462
++ L+ C++ + K +L+E +VK +S D H + +
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Query: 463 KTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDD 519
K D Y I +CR + A +M +M G +P +F+ +LI D
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 185/418 (44%), Gaps = 50/418 (11%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ R+ EA + + ++ KG+ + Y+++I +C K+D AH +L +M++K P+
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+T+N+L+ C + +A + M + GL P V + +I +
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ G PDA TY++ ++ C E RL +A D+ +M GVSPD TY+ L+ +G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH---------------GLCFLDRV 276
+ AF + M TG P+ T+ +LI LC + +
Sbjct: 687 QTNFAFDVLKRMRD--------TGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 277 EE---ALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDT 333
E +E+L M E ++PNA SY +I G C++G L A ++ + E
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 334 YDSLMD---SLSYEDTYSSVMNDYLAEGNM-------------------QRALQLDHDMS 371
+++L+ L + + V++D + G++ +R + ++
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL 858
Query: 372 RDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNS 429
+ GY +A+ ++I+G+ K+ EA +L + S T Y +L+E +S
Sbjct: 859 QCGYYEDELAWKIIIDGVGKQGLV-EAFYELFNVMEKNGCKFSSQT-YSLLIEGPPDS 914
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 182/462 (39%), Gaps = 70/462 (15%)
Query: 95 SAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPD-------- 146
S +LL+ +I G+ V L+ C DSV A+ +L R ++ D
Sbjct: 125 SYASLLTLLINNGYVGVVFKIRLLMIKSC--DSVGDALYVLDLC--RKMNKDERFELKYK 180
Query: 147 --VDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDL 204
+ YN +++ ++ + P+ TY+ ++ C + EA
Sbjct: 181 LIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQY 240
Query: 205 FREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYN 264
+++ G+ PD TYT L+ C + AF + +EM KG + V Y
Sbjct: 241 VSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNE--------VAYT 292
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
LIHGLC R++EA+++ M + P +Y+ +I C +A L E E+
Sbjct: 293 HLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET 352
Query: 325 AIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 384
I + TY L+DSL ++ ++A +L M G + + + Y+
Sbjct: 353 GIKP-NIHTYTVLIDSLC-------------SQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 385 LINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMR 444
LING K+ +A D++ + LS P+ Y+ EL+K Y
Sbjct: 399 LINGYCKRGMIEDA-VDVVELMESRKLS-PNTRTYN---------------ELIKGYC-- 439
Query: 445 DLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHA 504
+ H M L + + D YN LI CRS N AY + M G
Sbjct: 440 -----KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 505 PHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLK 546
P ++ ++I +L + E +C+L DS + K
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEE----------ACDLFDSLEQK 526
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 164/405 (40%), Gaps = 58/405 (14%)
Query: 17 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQS-------------LKRLCREGRIPEAEQ 63
NV +Y +I G+ AGK D E+ + E S + LC +G++ EA
Sbjct: 531 NVVMYTALIDGYC-KAGKVD-EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 64 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 123
+ E M GL T + +I D A++ +M++ G P TY + + YC
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 124 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 183
R + A ++ M E G+SPD+ +Y+ +I + D G P
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 184 TYSSLME---------------ALCVEQRLSE---AFDLFREMLRGGVSPDELTYTRLLN 225
T+ SL++ LC + E +L +M+ V+P+ +Y +L+
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 285
C VG A + D M G SP+ + +NAL+ C L + EA +++
Sbjct: 769 GICEVGNLRVAEKVFDHMQRN-------EGISPSELVFNALLSCCCKLKKHNEAAKVVDD 821
Query: 286 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 345
M +G P S +I G + GE + + + +L+ YED
Sbjct: 822 MICVGHLPQLESCKVLICGLYKKGEKERGTSV----------------FQNLLQCGYYED 865
Query: 346 --TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 388
+ +++ +G ++ +L + M ++G S YS+LI G
Sbjct: 866 ELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 173/364 (47%), Gaps = 33/364 (9%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
T S++ FC N+ A +L+ M GF P+VV YN+++ C+ ++ A+ + M
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
++G+ D +YN +IS V + I P+ +++L++ E L
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 270
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 258
EA +L++EM+R V P+ TY L+N C+ G A ++ D M+ KG PD
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD------- 323
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELK 318
+VTYN LI G C RVE+ +++ M GL +A +Y+T+I G+CQ G+L A ++
Sbjct: 324 -VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 319 IETEDKAIWWLDEDTYDSLMDSLS-----------YED-----------TYSSVMNDYLA 356
D + D TY+ L+D L ED TY+ ++
Sbjct: 383 NRMVDCGVSP-DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 357 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 416
++ A L ++R G +AY +I+GL +K REA + + DGF MPS
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF--MPSE 499
Query: 417 TVYD 420
+YD
Sbjct: 500 RIYD 503
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 27/285 (9%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ + A ++ M+ KG+ D TY+++I N + A LL +M+ + P+
Sbjct: 194 LCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 253
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V+ + +L+ + + ++ +A + + M R + P+V +YN +I+ FC
Sbjct: 254 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
V KG FPD TY++L+ C +R+ + LF EM G+ D TY L++ C G
Sbjct: 314 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG 373
Query: 232 EFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYN 264
+ A + + M+ G PD VT I+TYN
Sbjct: 374 KLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYN 433
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG 309
+I GLC D+++EA + R + G+ P+A++Y T+ISG C+ G
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 169/427 (39%), Gaps = 82/427 (19%)
Query: 92 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 151
K D A +L EM+ PS+V + ++ + + D + + M G+S D+ S+
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF- 117
Query: 152 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 211
+ L+ C RLS A L +M++
Sbjct: 118 ----------------------------------TILIHCFCRCSRLSLALALLGKMMKL 143
Query: 212 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 271
G P +T LLN C F +A L D M GF+P+ +V YN +I+GLC
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPN--------VVIYNTVINGLC 195
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDE 331
+ ALE+ M + G+ +AV+Y+T+ISG G A L D +D
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL---LRDMVKRKIDP 252
Query: 332 DTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 391
+ ++++++ ++ EGN+ A L +M R + + Y+ LING
Sbjct: 253 NVI-----------FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 392 KARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDA 450
+AK + S G P Y+ L+ C + + ++L + + + L DA
Sbjct: 302 HGCLGDAKYMFDLMVSKG--CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 451 ATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 510
T YN LI +C++ ++ A ++ MV G +P + +
Sbjct: 360 FT----------------------YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 397
Query: 511 LALISAL 517
L+ L
Sbjct: 398 NILLDCL 404
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 13/146 (8%)
Query: 21 YNGMIRGFATAAGKSDSESKKVGEAFQS------------LKRLCREGRIPEAEQMLEVM 68
YN +I G+ AGK + K L LC G+I +A M+E +
Sbjct: 362 YNTLIHGYC-QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 69 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 128
+ + +D TY+ +I C +K+ A L + KG P + Y +++ CR+
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 129 DKAVGILRAMAERGLSPDVDSYNRVI 154
+A + R M E G P Y+ +
Sbjct: 481 READKLCRRMKEDGFMPSERIYDETL 506
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 214/496 (43%), Gaps = 70/496 (14%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC EG ++ +++ M+ G TY++V+ W+C + +A LL M +KG
Sbjct: 243 LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDAD 302
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V TYN L+ CR + + K +LR M +R + P+ +YN +I+ F
Sbjct: 303 VCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN 362
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ G+ P+ T+++L++ E EA +F M G++P E++Y LL+ C
Sbjct: 363 EMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNA 422
Query: 232 EF--TKAFHLH-----------------DEMIHKGFLPDFVT--------GFSPAIVTYN 264
EF + F++ D + GFL + V G P IVTY+
Sbjct: 423 EFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS 482
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA---YELKIET 321
ALI+G C + R + A EI+ + +GLSPN + YST+I C++G L +A YE I
Sbjct: 483 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI-- 540
Query: 322 EDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 381
L+ T D T++ ++ G + A + M+ DG L + V+
Sbjct: 541 -------LEGHTRDHF--------TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 585
Query: 382 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDY 441
+ LING +A + G P++ Y LL+ L K
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVG--HHPTFFTYGSLLKG-----------LCKGG 632
Query: 442 SMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHY 501
+R+ + H D MYN L+ C+S N+ KA +++ EMV
Sbjct: 633 HLREAEKFLKSLHAV----------PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 682
Query: 502 GHAPHMFSVLALISAL 517
P ++ +LIS L
Sbjct: 683 SILPDSYTYTSLISGL 698
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 215/480 (44%), Gaps = 42/480 (8%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
REG I ++ ++ +M G T ++++G + S + L EM+ + P V
Sbjct: 175 REGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVA 234
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
T+N L+ C S +K+ +++ M + G +P + +YN V+ +C
Sbjct: 235 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 294
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
KG+ D TY+ L+ LC R+++ + L R+M + + P+E+TY L+N G+
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
A L +EM+ G SP VT+NALI G +EAL++ M GL+P
Sbjct: 355 LIASQLLNEMLS--------FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406
Query: 294 NAVSYSTVISGFCQIGE--LGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
+ VSY ++ G C+ E L + + ++++ + + TY+ ++
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI----------------TYTGMI 450
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
+ G + A+ L ++MS+DG V YS LING K R + AK + I G
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL- 509
Query: 412 SMPSYTVYDILLENCSN-SEFKSLVELVKDYSMRDLSDDAATAH---TTMLHLKNKTDGE 467
P+ +Y L+ NC K + + + + + D T + T++ + E
Sbjct: 510 -SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 468 N-----KTDGGMYNLLIFE-----HCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
+DG + N + F+ + S KA++++ EM GH P F+ +L+ L
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 628
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 128/538 (23%), Positives = 221/538 (41%), Gaps = 73/538 (13%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LCR RI + +L M+ + + +E TY+++I F N K+ A LL+EM++ G SP+
Sbjct: 313 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 372
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VT+N+L+ + + +A+ + M +GL+P SY ++ C
Sbjct: 373 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 432
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
G+ TY+ +++ LC L EA L EM + G+ PD +TY+ L+N C VG
Sbjct: 433 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 492
Query: 232 EFTKAFHLHDEMIHKGFLPD---------------------------FVTGFSPAIVTYN 264
F A + + G P+ + G + T+N
Sbjct: 493 RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 552
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
L+ LC +V EA E +R M G+ PN VS+ +I+G+ GE KA+ + + K
Sbjct: 553 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV-FDEMTK 611
Query: 325 AIWWLDEDTYDSLMDSL--------------------SYEDT--YSSVMNDYLAEGNMQR 362
TY SL+ L + DT Y++++ GN+ +
Sbjct: 612 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAK 671
Query: 363 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKART---------REAKRDLL------YIAS 407
A+ L +M + L Y+ LI+GL +K +T EA+ ++L
Sbjct: 672 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 731
Query: 408 DGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTT---MLHLKNKT 464
DG + E N ++V +M D T + + N+
Sbjct: 732 DGMFKAGQWKAGIYFREQMDN--LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 789
Query: 465 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 522
G N T YN+L+ + + +V ++ +Y ++ G P + +L+ + + M
Sbjct: 790 GGPNLTT---YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 844
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 195/424 (45%), Gaps = 42/424 (9%)
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
+PSV Y+ L+ Y R + ++ I R M G +P V + N ++
Sbjct: 162 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ + I PD AT++ L+ LC E ++ L ++M + G +P +TY +L+ C
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G F A L D M KG D + TYN LIH LC +R+ + +LR M +
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDAD--------VCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
+ PN V+Y+T+I+GF G++ A +L L+E L + T++
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQL-----------LNEMLSFGLSPN---HVTFN 377
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD 408
++++ +++EGN + AL++ + M G S V+Y VL++GL K A A+ + + +
Sbjct: 378 ALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRN 437
Query: 409 GFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN 468
G + + T ++ C N V L+ + S + D T ++ +++ K G
Sbjct: 438 G-VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVT-YSALINGFCKV-GRF 494
Query: 469 KT---------------DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLAL 513
KT +G +Y+ LI+ CR + +A +Y M+ GH F+ L
Sbjct: 495 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 554
Query: 514 ISAL 517
+++L
Sbjct: 555 VTSL 558
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 152/350 (43%), Gaps = 59/350 (16%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
D T +++I + + KI+ + LL EM + P++ TYN L+ Y +R V + +
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 195
R++ G+ PD + + ++ C + +G+ D T++ L+ C
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 877
Query: 196 QRLSEAFDLFR-----------------------------------EMLRGGVSPDELTY 220
++ AFDL + EM + G+SP+ Y
Sbjct: 878 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 937
Query: 221 TRLLNACCLVGEFTKAFHLHDEMI-HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEA 279
L+N C VG+ AF + +EMI HK P V +A++ L + +EA
Sbjct: 938 IGLINGLCRVGDIKTAFVVKEEMIAHK---------ICPPNVAESAMVRALAKCGKADEA 988
Query: 280 LEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMD 339
+LR M +M L P S++T++ C+ G + +A EL++ + + LD +Y+ L+
Sbjct: 989 TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGL-KLDLVSYNVLIT 1047
Query: 340 SLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 389
L A+G+M A +L +M DG+L++ Y LI GL
Sbjct: 1048 GLC-------------AKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 197/487 (40%), Gaps = 45/487 (9%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
LK LC+ G + EAE+ L+ + +D Y++++ C + A +L EM+ +
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERG-LSPDVDSYNRVISKFCXXXXXXXXX 167
P TY SL+ CR+ A+ + RG + P+ Y +
Sbjct: 685 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 744
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
+ G PD T +++++ ++ + DL EM P+ TY LL+
Sbjct: 745 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 804
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
+ + +F L+ +I G LPD +T S L+ G+C + +E L+IL+
Sbjct: 805 SKRKDVSTSFLLYRSIILNGILPDKLTCHS--------LVLGICESNMLEIGLKILKAFI 856
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 347
G+ + +++ +IS C GE+ A++L ++ LD+DT D+++ L+ +
Sbjct: 857 CRGVEVDRYTFNMLISKCCANGEINWAFDL-VKVMTSLGISLDKDTCDAMVSVLNRNHRF 915
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 407
Q + + H+MS+ G Y LINGL + + A ++
Sbjct: 916 -------------QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA-----FVVK 957
Query: 408 DGFLS---MPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHL--KN 462
+ ++ P ++ + L+ + ++ + TT++HL KN
Sbjct: 958 EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 1017
Query: 463 KTDGEN------------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 510
E K D YN+LI C ++ A+ +Y EM G + +
Sbjct: 1018 GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTY 1077
Query: 511 LALISAL 517
ALI L
Sbjct: 1078 KALIRGL 1084
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 3/200 (1%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L R R E+ +L M +G+ + R Y +I C + I +A + EMIA P
Sbjct: 909 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPP 968
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V +++V A + D+A +LR M + L P + S+ ++ C
Sbjct: 969 NVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRV 1028
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ G+ D +Y+ L+ LC + ++ AF+L+ EM G + TY L+ L
Sbjct: 1029 VMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG-LLAR 1087
Query: 232 E--FTKAFHLHDEMIHKGFL 249
E F+ A + +++ +GF+
Sbjct: 1088 ETAFSGADIILKDLLARGFI 1107
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 182/382 (47%), Gaps = 30/382 (7%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LCR R A ++ M G D T SS+I FC N++ A L+S+M GF P
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VV YN+++ C+ V+ AV + M G+ D +YN +++ C
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
V + I P+ T++++++ E + SEA L+ EM R V PD TY L+N C+ G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+A + D M+ KG LPD +VTYN LI+G C RV+E ++ R M + GL
Sbjct: 294 RVDEAKQMLDLMVTKGCLPD--------VVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 292 SPNAVSYSTVISGFCQIGELGKAYEL--------KIETEDKAIW-----WLDEDT---YD 335
+ ++Y+T+I G+ Q G A E+ I T ++ W E ++
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFE 405
Query: 336 SLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 393
++ S D TY+ V++ GN++ A L +S G V+Y+ +I+G +K
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKR 465
Query: 394 RTREAKRDLLY--IASDGFLSM 413
+ K DLLY + DG L +
Sbjct: 466 QW--DKSDLLYRKMQEDGLLPL 485
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 180/440 (40%), Gaps = 39/440 (8%)
Query: 99 LLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 158
L +MI PS+V ++ ++ + + D + + M G+ D+ SYN VI+ C
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 159 XXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 218
+ G PD T SSL+ C R+ +A DL +M G PD +
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 219 TYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEE 278
Y +++ C +G A L D M G D VTYN+L+ GLC R +
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD--------AVTYNSLVAGLCCSGRWSD 227
Query: 279 ALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLM 338
A ++R M + PN ++++ VI F + G+ +A +L E + + D D +
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV---DPDVF---- 280
Query: 339 DSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
TY+S++N G + A Q+ M G L V Y+ LING K R E
Sbjct: 281 -------TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEG 333
Query: 399 KRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAAT------ 452
+ +A G + Y+ +++ + + + +S D + T
Sbjct: 334 TKLFREMAQRGLVG--DTITYNTIIQGYFQAGRPDAAQEI--FSRMDSRPNIRTYSILLY 389
Query: 453 -------AHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 505
++ +N E + D YN++I C+ NV A++++ + G P
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449
Query: 506 HMFSVLALISALDDDRMYNE 525
+ S +IS R +++
Sbjct: 450 DVVSYTTMISGFCRKRQWDK 469
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 229/524 (43%), Gaps = 70/524 (13%)
Query: 43 GEAFQSL-KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLS 101
+A+ SL + CRE + + ++L MK + + + TY +V+ C+ +D A+ ++
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 102 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXX 161
EMIA G P+VV Y +L+ + + A+ +L+ M E+G++PD+ YN +I
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501
Query: 162 XXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYT 221
V+ G+ P+A TY + + + A +EM GV P+++ T
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 222 RLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT--------------------------- 254
L+N C G+ +A + M+ +G L D T
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
G +P + +Y LI+G L +++A I M E GL+PN + Y+ ++ GFC+ GE+ KA
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 374
EL LDE + L + TY ++++ Y G++ A +L +M G
Sbjct: 682 KEL-----------LDEMSVKGLHPNAV---TYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 375 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNS--EFK 432
+ Y+ L++G R + +R + T++ + C++S F
Sbjct: 728 LVPDSFVYTTLVDGC---CRLNDVER--------------AITIFGTNKKGCASSTAPFN 770
Query: 433 SLVELVKDYSMRDLSDDAATAHTTMLH--LKNKTDGENKTDGGMYNLLIFEHCRSHNVHK 490
+L+ V + +L T +L+ + D K + YN++I C+ N+
Sbjct: 771 ALINWVFKFGKTEL-------KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823
Query: 491 AYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTL 534
A ++ +M + P + + +L++ D EM V + +
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 200/485 (41%), Gaps = 54/485 (11%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ R+ +A+ +L M G+ LD TYS +I D+A L+ EM++ G +
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK 346
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
Y+ + + ++KA + M GL P +Y +I +C
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ I TY ++++ +C L A+++ +EM+ G P+ + YT L+
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
F A + EM +G PD I YN+LI GL R++EA L M E GL
Sbjct: 467 RFGDAMRVLKEMKEQGIAPD--------IFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIW--------WLDE-----------D 332
PNA +Y ISG+ + E A + E + + ++E
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 333 TYDSLMDS--LSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 390
Y S++D L TY+ +MN + A ++ +M G +Y VLING
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638
Query: 391 KKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDD 449
K ++A + +G P+ +Y++LL C + E + EL+ + S++ L +
Sbjct: 639 KLGNMQKASSIFDEMVEEGL--TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 450 AATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFS 509
A T Y +I +C+S ++ +A+ ++ EM G P F
Sbjct: 697 AVT----------------------YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 510 VLALI 514
L+
Sbjct: 735 YTTLV 739
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 182/484 (37%), Gaps = 103/484 (21%)
Query: 91 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAE--RGLSPDVD 148
N++D + M+ + V TY+ L+ A+CR +V +L + R + +VD
Sbjct: 200 NRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVD 259
Query: 149 SYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 208
++ + KG+ P TY L++ LC +RL +A L EM
Sbjct: 260 GALKL----------------KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303
Query: 209 LRGGVSPDELTYTRLLNA------------------------------CCLV-----GEF 233
GVS D TY+ L++ CC+ G
Sbjct: 304 DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVM 363
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
KA L D MI G +P Y +LI G C V + E+L M + +
Sbjct: 364 EKAKALFDGMIASGLIPQ--------AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
Query: 294 NAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMND 353
+ +Y TV+ G C G+L AY + E + +++ Y++++
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEM-------IASGCRPNVV-------IYTTLIKT 461
Query: 354 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM 413
+L A+++ +M G Y+ LI GL K R EA+ L+ + +G
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL--K 519
Query: 414 PSYTVYDILLEN-CSNSEFKS-------------------LVELVKDYSMRDLSDDAATA 453
P+ Y + SEF S L+ +Y + +A +A
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 454 HTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLAL 513
+ +M+ G+ KT Y +L+ ++ V A ++ EM G AP +FS L
Sbjct: 580 YRSMVD--QGILGDAKT----YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633
Query: 514 ISAL 517
I+
Sbjct: 634 INGF 637
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 99/284 (34%), Gaps = 78/284 (27%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L CR G I +A+++L+ M KGL + TY ++I +C + A L EM KG
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGIL--------------------------------- 135
P Y +LV CR + V++A+ I
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 136 --RAMA---ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLME 190
R M +R P+ +YN +I C + + P TY+SL+
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 191 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHK---- 246
R +E F +F E + G+ PD + Y+ ++NA G TKA L D+M K
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
Query: 247 ------------------------------------GFLPDFVT 254
++PD T
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 148/374 (39%), Gaps = 59/374 (15%)
Query: 178 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG------ 231
+ P + L++AL RL +D+++ M+ V D TY L+ A C G
Sbjct: 182 LVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGK 241
Query: 232 --------EFTKA-------FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRV 276
EF A L + MI KG +P TY+ LI GLC + R+
Sbjct: 242 DVLFKTEKEFRTATLNVDGALKLKESMICKGLVP--------LKYTYDVLIDGLCKIKRL 293
Query: 277 EEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDS 336
E+A +L M +G+S + +YS +I G LK D A + E
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGL-----------LKGRNADAAKGLVHEMVSHG 342
Query: 337 LMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTR 396
+ D VM+ EG M++A L M G + AY+ LI G ++ R
Sbjct: 343 INIKPYMYDCCICVMS---KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 397 EAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTT 456
+ L+ + + P YT ++ CS+ + +VK+ + +TT
Sbjct: 400 QGYELLVEMKKRNIVISP-YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI-YTT 457
Query: 457 MLH--LKNKTDG-------ENKTDG-----GMYNLLIFEHCRSHNVHKAYNMYMEMVHYG 502
++ L+N G E K G YN LI ++ + +A + +EMV G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 503 HAPHMFSVLALISA 516
P+ F+ A IS
Sbjct: 518 LKPNAFTYGAFISG 531
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 206/460 (44%), Gaps = 47/460 (10%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC++G++ + L ++ KG++ D TY+++I + + ++ A L++ M KGFSP
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPG 304
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V TYN+++ C+ ++A + M GLSPD +Y ++ + C
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFS 364
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ + PD +SS+M L +A F + G+ PD + YT L+ C G
Sbjct: 365 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 424
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ A +L +EM+ +G D +VTYN ++HGLC + EA ++ M E L
Sbjct: 425 MISVAMNLRNEMLQQGCAMD--------VVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
P++ + + +I G C++G L A EL + ++K I LD TY++L+D
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI-RLDVVTYNTLLDGFG--------- 526
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
G++ A ++ DM L + ++YS+L+N L K EA R
Sbjct: 527 ----KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR----------- 571
Query: 412 SMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTD 471
V+D ++ ++K Y + D + M+ ++G D
Sbjct: 572 ------VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI-----SEG-FVPD 619
Query: 472 GGMYNLLIFEHCRSHNVHKAYNMY--MEMVHYGHAPHMFS 509
YN LI+ R N+ KA+ + ME G P +F+
Sbjct: 620 CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 190/455 (41%), Gaps = 45/455 (9%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ G+ A+++ M GL D TY S++ C + + S+M ++ P
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+V ++S++ + R ++DKA+ ++ E GL PD Y +I +C
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ +G D TY++++ LC + L EA LF EM + PD T T L++ C +G
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
A L +M K D +VTYN L+ G + ++ A EI M +
Sbjct: 495 NLQNAMELFQKMKEKRIRLD--------VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
P +SYS +++ C G L +A+ +W DE ++ ++ +S++
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFR---------VW--DEMISKNIKPTVM---ICNSMI 592
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
Y GN M +G++ ++Y+ LI G ++ +A + + +
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG 652
Query: 412 SMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT 470
+P Y+ +L C ++ K +++ R ++ D +T
Sbjct: 653 LVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST------------------ 694
Query: 471 DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 505
Y +I N+ +A+ ++ EM+ G +P
Sbjct: 695 ----YTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 171/432 (39%), Gaps = 72/432 (16%)
Query: 18 VNIYNGMIRGFATAAGKSDSESKKVGEAFQS------------LKRLCREGRIPEAEQML 65
V YN +I G GK + + E +S L C++G + E E++
Sbjct: 305 VYTYNTVINGLC-KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
M+ + + D +SS++ F +D A + + G P V Y L+ YCR+
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
+ A+ + M ++G + DV +YN ++ C ++ +FPD+ T
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL 483
Query: 186 SSLMEALCVEQRLSEAFDLFR-----------------------------------EMLR 210
+ L++ C L A +LF+ +M+
Sbjct: 484 TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Query: 211 GGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGL 270
+ P ++Y+ L+NA C G +AF + DEMI K P ++ N++I G
Sbjct: 544 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK--------NIKPTVMICNSMIKGY 595
Query: 271 CFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL--KIETEDKAIWW 328
C + L M G P+ +SY+T+I GF + + KA+ L K+E E
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG--- 652
Query: 329 LDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 388
L D + TY+S+++ + + M+ A + M G Y+ +ING
Sbjct: 653 LVPDVF-----------TYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Query: 389 LHKKARTREAKR 400
+ EA R
Sbjct: 702 FVSQDNLTEAFR 713
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 2/198 (1%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
G I A+++ M K + +YS ++ C+ + A + EMI+K P+V+
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
NS++ YCR + L M G PD SYN +I F +
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 176 K--GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
+ G+ PD TY+S++ C + ++ EA + R+M+ GV+PD TYT ++N
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708
Query: 234 TKAFHLHDEMIHKGFLPD 251
T+AF +HDEM+ +GF PD
Sbjct: 709 TEAFRIHDEMLQRGFSPD 726
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 120/244 (49%), Gaps = 10/244 (4%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C+ G + A ++ + MK K + LD TY++++ F + ID+A + ++M++K P+
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
++Y+ LV A C + + +A + M + + P V N +I +C
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREML--RGGVSPDELTYTRLLNACCLV 230
+ +G PD +Y++L+ E+ +S+AF L ++M +GG+ PD TY +L+ C
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
+ +A + +MI +G PD T Y +I+G D + EA I M + G
Sbjct: 671 NQMKEAEVVLRKMIERGVNPDRST--------YTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 291 LSPN 294
SP+
Sbjct: 723 FSPD 726
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 110/218 (50%), Gaps = 13/218 (5%)
Query: 13 KMALNVNIYNGMIRGFATAAGK-------SDSESKKVGEAFQS----LKRLCREGRIPEA 61
++ L+V YN ++ GF +D SK++ S + LC +G + EA
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
++ + M K + +S+I +C + L +MI++GF P ++YN+L++
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Query: 122 YCRRDSVDKAVGILRAMAER--GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 179
+ R +++ KA G+++ M E GL PDV +YN ++ FC +++G+
Sbjct: 630 FVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN 689
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDE 217
PD +TY+ ++ + L+EAF + EML+ G SPD+
Sbjct: 690 PDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 178/429 (41%), Gaps = 51/429 (11%)
Query: 179 FPD----AATYSSLMEALCVEQRLSEAFD-LFREMLRGGVSPDELTYT--RLLNAC---- 227
FP+ + + S+++ L RLS+A L R + R GVS E+ + + C
Sbjct: 106 FPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSND 165
Query: 228 ----CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 283
L+ + +A L + H+ F GF+ +I NALI L + VE A +
Sbjct: 166 SVFDLLIRTYVQARKLREA--HEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 284 RGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSY 343
+ + G+ N + + +++ C+ G++ K + ++K + Y
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGV----------------Y 267
Query: 344 ED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRD 401
D TY+++++ Y ++G M+ A +L + M G+ Y+ +INGL K + AK
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 402 LLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLK 461
+ G LS S T +L+E C + ++ D RD+ D ++M+ L
Sbjct: 328 FAEMLRSG-LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV-CFSSMMSLF 385
Query: 462 NKTDGENKT--------------DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM 507
++ +K D +Y +LI +CR + A N+ EM+ G A +
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445
Query: 508 FSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAE 567
+ ++ L +M E + N DS L +L + + + +++ +
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 568 MAMDSLLLD 576
M + LD
Sbjct: 506 MKEKRIRLD 514
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 183/389 (47%), Gaps = 25/389 (6%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
CR R+ A +L M G T+ S++ FC +N+I A +L+ M+ G+ P+
Sbjct: 116 FCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPN 175
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VV YN+L+ C+ ++ A+ +L M ++GL DV +YN +++ C
Sbjct: 176 VVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLR 235
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ + I PD T+++L++ + L EA +L++EM++ V P+ +TY ++N C+ G
Sbjct: 236 DMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
A D M KG P+ +VTYN LI G C V+E +++ + M G
Sbjct: 296 RLYDAKKTFDLMASKGCFPN--------VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
+ + +Y+T+I G+CQ+G+L A D W + ++ T+ ++
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVAL-------DIFCWMVSRRVTPDII-------THCILL 393
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
+ G ++ AL DM VAY+++I+GL K + +A + +G
Sbjct: 394 HGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGV- 452
Query: 412 SMPSYTVYDILLEN-CSNSEFKSLVELVK 439
P Y I++ C N + EL++
Sbjct: 453 -KPDARTYTIMILGLCKNGPRREADELIR 480
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 150/321 (46%), Gaps = 19/321 (5%)
Query: 17 NVNIYNGMIRGFATAAGKS-------DSESKKVGEAFQS----LKRLCREGRIPEAEQML 65
NV +YN +I G + + E K +G + L LC GR +A +ML
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
M + + D T++++I F +D A L EMI P+ VTYNS++ C
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
+ A MA +G P+V +YN +IS FC +G D TY
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 186 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
++L+ C +L A D+F M+ V+PD +T+ LL+ C+ GE A D+M
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Query: 246 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
++ IV YN +IHGLC D+VE+A E+ +P G+ P+A +Y+ +I G
Sbjct: 415 S---EKYI-----GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 306 CQIGELGKAYELKIETEDKAI 326
C+ G +A EL +++ I
Sbjct: 467 CKNGPRREADELIRRMKEEGI 487
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 180/428 (42%), Gaps = 38/428 (8%)
Query: 92 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 151
+ + A L EM+ PS+V + L+ A + + + M G+S D+ S+
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 152 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 211
+I FC + G P T+ SL+ C+ R+ +AF L M++
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 212 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 271
G P+ + Y L++ C GE A L +EM KG D +VTYN L+ GLC
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD--------VVTYNTLLTGLC 222
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDE 331
+ R +A +LR M + ++P+ V+++ +I F + G L +A EL E ++ D
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV---DP 279
Query: 332 DTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 391
+ TY+S++N G + A + M+ G + V Y+ LI+G K
Sbjct: 280 NNV-----------TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Query: 392 KARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAA 451
E + ++ +GF + +T ++ C + + +++ R ++ D
Sbjct: 329 FRMVDEGMKLFQRMSCEGF-NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDII 387
Query: 452 TAHTTMLH--------------LKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYME 497
T H +LH + + E YN++I C++ V KA+ ++
Sbjct: 388 T-HCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCR 446
Query: 498 MVHYGHAP 505
+ G P
Sbjct: 447 LPVEGVKP 454
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 164/363 (45%), Gaps = 22/363 (6%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L C RI +A ++ +M G + Y+++I C +++ A LL+EM KG
Sbjct: 148 LHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGL 207
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
VVTYN+L+ C A +LR M +R ++PDV ++ +I F
Sbjct: 208 GADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQE 267
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ + P+ TY+S++ LC+ RL +A F M G P+ +TY L++ C
Sbjct: 268 LYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFC 327
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
F + DE + K F GF+ I TYN LIHG C + ++ AL+I M
Sbjct: 328 -------KFRMVDEGM-KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
++P+ +++ ++ G C GE+ A +K + ++ ++ Y+ ++ L D
Sbjct: 380 RRVTPDIITHCILLHGLCVNGEIESAL-VKFDDMRESEKYIGIVAYNIMIHGLCKAD--- 435
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD 408
+++A +L + +G Y+++I GL K REA + + +
Sbjct: 436 ----------KVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Query: 409 GFL 411
G +
Sbjct: 486 GII 488
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 137/332 (41%), Gaps = 51/332 (15%)
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 256
R +AF LF EM+ P + +TRLL A + + + +M + G
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKME--------LYGI 102
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
S + ++ LIH C R+ AL +L M ++G P+ V++ +++ GFC + +G A+
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 317 LKIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLAEGNMQRALQLDHDMSRD 373
L I LM YE Y+++++ G + AL+L ++M +
Sbjct: 163 LVI-----------------LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK 205
Query: 374 GYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKS 433
G + V Y+ L+ GL R +A R L +++ N + +
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARML-----------------RDMMKRSINPDVVT 248
Query: 434 LVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYN 493
L+ + + D+A + M+ ++ D N T YN +I C ++ A
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMI--QSSVDPNNVT----YNSIINGLCMHGRLYDAKK 302
Query: 494 MYMEMVHYGHAPHMFSVLALISALDDDRMYNE 525
+ M G P++ + LIS RM +E
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/513 (24%), Positives = 218/513 (42%), Gaps = 59/513 (11%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
CR ++P A +L M G D T SS++ +C+ +I A L+ +M + P+
Sbjct: 125 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VT+N+L+ + +AV ++ M RG PD+ +Y V++ C
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 244
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
I D Y+++++ALC + +++A +LF EM G+ P+ +TY L+ C G
Sbjct: 245 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Query: 232 EFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYN 264
++ A L +MI + P+ VT P I TY+
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
+LI+G C DR++EA + M PN V+Y+T+I GFC+ + + EL E +
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424
Query: 325 AIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 384
+ + TY++++ G+ A ++ M DG + YS+
Sbjct: 425 GL--------------VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 385 LINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSM 443
L++GL K + +A Y+ P Y+I++E C + + +L S+
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKM--EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 444 RDLSDDAATAHTTMLH------LKNKTDG---ENKTDG-----GMYNLLIFEHCRSHNVH 489
+ + + +TTM+ LK + D E K DG G YN LI R +
Sbjct: 529 KGVKPN-VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 587
Query: 490 KAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 522
+ + EM G ++ +I+ L D R+
Sbjct: 588 ASAELIKEMRSCGFVGDASTISMVINMLHDGRL 620
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 166/347 (47%), Gaps = 23/347 (6%)
Query: 45 AFQSLKR-LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 103
+ SL R LC GR +A ++L M + + + T+S++I F K+ A L EM
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 104 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 163
I + P + TY+SL+ +C D +D+A + M + P+V +YN +I FC
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 164 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 223
+G+ + TY++L++ L A +F++M+ GV PD +TY+ L
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 224 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 283
L+ C G+ KA + + + PD I TYN +I G+C +VE+ ++
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPD--------IYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 284 RGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSY 343
+ G+ PN + Y+T+ISGFC+ G LK E D + ED +L
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKG-------LK-EEADALFREMKED------GTLPN 569
Query: 344 EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 390
TY++++ L +G+ + +L +M G++ S++IN LH
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH 616
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 208/483 (43%), Gaps = 67/483 (13%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
D +Y+ +I FC +++ A +L +M+ G+ P +VT +SL+ YC + +AV ++
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 195
M P+ ++N +I V +G PD TY +++ LC
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
+ A L ++M +G + D + YT +++A C A +L EM +KG P+
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN---- 289
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
+VTYN+LI LC R +A +L M E ++PN V++S +I F + G+L +A
Sbjct: 290 ----VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 316 ELKIETEDKAIWWLDED--TYDSLMDSLSYED----------------------TYSSVM 351
+L E ++I D D TY SL++ D TY++++
Sbjct: 346 KLYDEMIKRSI---DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
+ ++ ++L +MS+ G + + V Y+ LI GL + A++ + SDG
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV- 461
Query: 412 SMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT 470
P Y ILL+ C + + + + + + D T
Sbjct: 462 -PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT------------------ 502
Query: 471 DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL-------DDDRMY 523
YN++I C++ V ++++ + G P++ +IS + D ++
Sbjct: 503 ----YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 524 NEM 526
EM
Sbjct: 559 REM 561
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 192/450 (42%), Gaps = 58/450 (12%)
Query: 92 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 151
K+D A L EM+ PS+V +N L+ A + + D + + M +S D+ SYN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 152 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 211
+I+ FC + G PD T SSL+ C +R+SEA L +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 212 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 271
P+ +T+ L++ L + ++A L D M+ +G PD + TY +++GLC
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPD--------LFTYGTVVNGLC 231
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDE 331
++ AL +L+ M + + + V Y+T+I C + A L E ++K I +
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP-NV 290
Query: 332 DTYDSLMDSL----SYED------------------TYSSVMNDYLAEGNMQRALQLDHD 369
TY+SL+ L + D T+S++++ ++ EG + A +L +
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 370 MSRDGYLSSYVAYSVLINGLHKKARTREAKRDL-LYIASDGFLSMPSYTVYDILLEN-CS 427
M + YS LING R EAK L I+ D F P+ Y+ L++ C
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF---PNVVTYNTLIKGFCK 407
Query: 428 NSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHN 487
+ +EL ++ S R L + T YN LI ++ +
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVT----------------------YNTLIQGLFQAGD 445
Query: 488 VHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
A ++ +MV G P + + L+ L
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 162/429 (37%), Gaps = 111/429 (25%)
Query: 176 KGIFPDAATY---SSLMEALCVEQRLSEAFDLFREMLRGGVSP----------------- 215
+G++ AA+Y L + ++ +L +A DLF EM++ P
Sbjct: 36 RGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNK 95
Query: 216 ------------------DELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD------ 251
D +Y L+N C + A + +M+ G+ PD
Sbjct: 96 FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSS 155
Query: 252 ---------------------FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
FV + P VT+N LIHGL ++ EA+ ++ M G
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
Query: 291 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL-SYED---- 345
P+ +Y TV++G C+ G++ A L ++ +K D Y +++D+L +Y++
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSL-LKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 346 -----------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 388
TY+S++ G A +L DM + V +S LI+
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 389 LHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSD 448
K+ + EA++ +YD +++ + + + L+ + M D D
Sbjct: 335 FVKEGKLVEAEK-----------------LYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 449 DAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMF 508
+A M+ +K N YN LI C++ V + ++ EM G +
Sbjct: 378 EAKHMFELMI---SKDCFPNVV---TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 509 SVLALISAL 517
+ LI L
Sbjct: 432 TYNTLIQGL 440
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 185/389 (47%), Gaps = 29/389 (7%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLN---KIDSAHTLLSEMIAKGF 108
LC+ G++ +A ++E MK G + +Y+++I +C L K+ A +L EM+
Sbjct: 233 LCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV 292
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
SP++ T+N L+ + + D++ ++ + + M ++ + P+V SYN +I+ C
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
V G+ P+ TY++L+ C L EA D+F + G P Y L++A C
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
+G+ F L +EM +G +PD + TYN LI GLC +E A ++ +
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPD--------VGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
GL P+ V++ ++ G+C+ GE KA L E S M TY+
Sbjct: 465 KGL-PDLVTFHILMEGYCRKGESRKAAMLLKEM--------------SKMGLKPRHLTYN 509
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA-YSVLINGLHKKARTREAKRDLLYIAS 407
VM Y EGN++ A + M ++ L VA Y+VL+ G +K + +A L +
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569
Query: 408 DGFLSMPSYTVYDILLENCSNSEFKSLVE 436
G + P+ Y+I+ E + F +E
Sbjct: 570 KGLV--PNRITYEIVKEEMVDQGFVPDIE 596
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 189/423 (44%), Gaps = 50/423 (11%)
Query: 91 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSY 150
N+ + EMI + P+V T+N ++ A C+ ++KA ++ M G SP+V SY
Sbjct: 202 NRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSY 261
Query: 151 NRVISKFCX---XXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFRE 207
N +I +C V+ + P+ T++ L++ + L + +F+E
Sbjct: 262 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 321
Query: 208 MLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALI 267
ML V P+ ++Y L+N C G+ ++A + D+M+ G P ++TYNALI
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVS--------AGVQPNLITYNALI 373
Query: 268 HGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIW 327
+G C D ++EAL++ + G P Y+ +I +C++G++ + LK E E + I
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 328 WLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 387
D TY+ L+ L GN++ A +L ++ G L V + +L+
Sbjct: 434 P-DVGTYNCLIAGLC-------------RNGNIEAAKKLFDQLTSKG-LPDLVTFHILME 478
Query: 388 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDL 446
G +K +R+A L ++ G P + Y+I+++ C K
Sbjct: 479 GYCRKGESRKAAMLLKEMSKMGL--KPRHLTYNIVMKGYCKEGNLK-------------- 522
Query: 447 SDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPH 506
AAT T + + + + + YN+L+ + + + A + EM+ G P+
Sbjct: 523 ---AATNMRTQMEKERRL----RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Query: 507 MFS 509
+
Sbjct: 576 RIT 578
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 152/370 (41%), Gaps = 79/370 (21%)
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 241
A + LM AL E R ++ +++EM+R + P+ T+ ++NA C G+ KA + +
Sbjct: 188 ALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME 247
Query: 242 EMIHKGFLPDFVT------GF------------------------SPAIVTYNALIHGLC 271
+M G P+ V+ G+ SP + T+N LI G
Sbjct: 248 DMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFW 307
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDE 331
D + ++++ + M + + PN +SY+++I+G C G++ +A ++ + + +
Sbjct: 308 KDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP-NL 366
Query: 332 DTYDSLMDSLSYED----------------------TYSSVMNDYLAEGNMQRALQLDHD 369
TY++L++ D Y+ +++ Y G + L +
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 370 MSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSN 428
M R+G + Y+ LI GL + AK+ + S G +P + IL+E C
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG---LPDLVTFHILMEGYCRK 483
Query: 429 SEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNV 488
E + L+K+ S L H T YN+++ +C+ N+
Sbjct: 484 GESRKAAMLLKEMSKMGLK----PRHLT------------------YNIVMKGYCKEGNL 521
Query: 489 HKAYNMYMEM 498
A NM +M
Sbjct: 522 KAATNMRTQM 531
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 215/485 (44%), Gaps = 47/485 (9%)
Query: 68 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 127
M+ KG+ + T S +I FC K+ A + + ++I G+ P+ +T+++L+ C
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 128 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 187
V +A+ ++ M E G PD+ + N +++ C V+ G P+A TY
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 188 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 247
++ +C + + A +L R+M + D + Y+ +++ C G AF+L +EM K
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK- 292
Query: 248 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQ 307
G + I+TYN LI G C R ++ ++LR M + ++PN V++S +I F +
Sbjct: 293 -------GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 308 IGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED---------------------- 345
G+L +A EL E + I D TY SL+D E+
Sbjct: 346 EGKLREAEELHKEMIHRGIAP-DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 346 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 405
T++ ++N Y + L+L MS G ++ V Y+ LI G + + AK +
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 406 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 464
S P+ Y ILL+ C N E + +E+ + + D + + + N +
Sbjct: 465 VSRKV--PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 465 DGEN-------------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 511
++ K YN++I C+ + +A ++ +M GHAP ++
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYN 582
Query: 512 ALISA 516
LI A
Sbjct: 583 ILIRA 587
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 211/473 (44%), Gaps = 49/473 (10%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC G+ EA +++ M G + TY V+ C + A LL +M +
Sbjct: 203 LCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V Y+ ++ C+ S+D A + M +G++ ++ +YN +I FC
Sbjct: 263 AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLR 322
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ + I P+ T+S L+++ E +L EA +L +EM+ G++PD +TYT L++ C
Sbjct: 323 DMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 382
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
KA + D M+ K G P I T+N LI+G C +R+++ LE+ R M G+
Sbjct: 383 HLDKANQMVDLMVSK--------GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
+ V+Y+T+I GFC++G+L A EL E + + + TY L+D L
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP-NIVTYKILLDGLC--------- 484
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
G ++AL++ + + Y+++I+G+ ++ + A D F
Sbjct: 485 ----DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD--------AWDLFC 532
Query: 412 SMPSYTVYDILLENCSNSEFKSLVELVKDYSMR--DLSDDAATAHTTMLHLKNKTDGENK 469
S+P K + VK Y++ L + +L K + DG +
Sbjct: 533 SLP----------------LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG-HA 575
Query: 470 TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 522
DG YN+LI H + K+ + E+ G + ++ +I L D R+
Sbjct: 576 PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRL 628
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 184/405 (45%), Gaps = 25/405 (6%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L +C+ G+ A ++L M+ + + LD YS +I C +D+A L +EM KG
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
+ +++TYN L+ +C D +LR M +R ++P+V +++ +I F
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ +GI PD TY+SL++ C E L +A + M+ G P+ T+ L+N C
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
L +M +G + D VTYN LI G C L ++ A E+ + M
Sbjct: 415 KANRIDDGLELFRKMSLRGVVAD--------TVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
+ PN V+Y ++ G C GE KA E+ E +K+ LD Y+ ++ + +
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALEI-FEKIEKSKMELDIGIYNIIIHGMC----NA 521
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD 408
S ++D A L + G Y+++I GL KK EA+ + D
Sbjct: 522 SKVDD---------AWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 409 GFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMRDLSDDAAT 452
G P Y+IL+ + + + V+L+++ S DA+T
Sbjct: 573 G--HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAST 615
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 199/452 (44%), Gaps = 56/452 (12%)
Query: 92 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 151
K D A L +MI P+V+ ++ L A + D + + + M +G++ ++ + +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 152 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 211
+I+ FC + G P+ T+S+L+ LC+E R+SEA +L M+
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 212 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 271
G PD +T L+N CL G+ +A L D+M+ G P VTY +++ +C
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE--------YGCQPNAVTYGPVLNVMC 239
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDE 331
+ A+E+LR M E + +AV YS +I G C+ G L A+ L E E K I +
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT-NI 298
Query: 332 DTYDSLMDSLS----YED------------------TYSSVMNDYLAEGNMQRALQLDHD 369
TY+ L+ ++D T+S +++ ++ EG ++ A +L +
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 370 MSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSN 428
M G + Y+ LI+G K+ +A + + + S G P+ ++IL+ C
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG--CDPNIRTFNILINGYCKA 416
Query: 429 SEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNV 488
+ +EL + S+R + D T YN LI C +
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVT----------------------YNTLIQGFCELGKL 454
Query: 489 HKAYNMYMEMVHYGHAPHMFSVLALISALDDD 520
+ A ++ EMV P++ + L+ L D+
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 148/363 (40%), Gaps = 68/363 (18%)
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
+Y + + V+ + +A DLFR+M+ P + ++RL +A ++ L +M
Sbjct: 55 SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 114
Query: 244 IHKGFLPDFVT---------------------------GFSPAIVTYNALIHGLCFLDRV 276
KG + T G+ P +T++ LI+GLC RV
Sbjct: 115 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 174
Query: 277 EEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDT-YD 335
EALE++ M EMG P+ ++ +T+++G C G+ E +A+ +D+ Y
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGK-----------EAEAMLLIDKMVEYG 223
Query: 336 SLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKART 395
+++ TY V+N G A++L M V YS++I+GL K
Sbjct: 224 CQPNAV----TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 396 REAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAH 454
A + G + + Y+IL+ C+ + +L++D R ++ + T
Sbjct: 280 DNAFNLFNEMEMKGITT--NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT-- 335
Query: 455 TTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 514
+++LI + + +A ++ EM+H G AP + +LI
Sbjct: 336 --------------------FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
Query: 515 SAL 517
Sbjct: 376 DGF 378
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 160/329 (48%), Gaps = 39/329 (11%)
Query: 20 IYNGMIRGFATAAGKSDSES--KKVGEAFQSLKRLC----------REGRIPEAEQMLEV 67
I+N +I GF T D+++ + ++ + +C +EG + A ++L
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 68 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 127
M+ KG + +Y+ ++ FC L KID A+ +L+EM A G P+ V +N L+ A+C+
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 128 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 187
+ +AV I R M +G PDV ++N +IS C + +G+ + TY++
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 188 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 247
L+ A + EA L EM+ G DE+TY L+ C GE KA L ++M+ G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 248 FLPDFVT---------------------------GFSPAIVTYNALIHGLCFLDRVEEAL 280
P ++ G +P IVT+N+LI+GLC R+E+ L
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 281 EILRGMPEMGLSPNAVSYSTVISGFCQIG 309
+ R + G+ P+ V+++T++S C+ G
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 199/450 (44%), Gaps = 54/450 (12%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
T+ V+ FC +N+IDSA +LL +M G P+ V Y +L+ + + + V++A+ +L M
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
G PD +++N VI C + +G PD TY LM LC R+
Sbjct: 279 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV 338
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT--GF 256
A DLF + + P+ + + L++ G A K L D VT G
Sbjct: 339 DAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDA---------KAVLSDMVTSYGI 385
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
P + TYN+LI+G V ALE+L M G PN SY+ ++ GFC++G++ +AY
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 317 LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 376
+ L+E + D L + ++ +++ + E + A+++ +M R G
Sbjct: 446 V-----------LNEMSADGLKPNTV---GFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491
Query: 377 SSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLV 435
++ LI+GL + + A L + S+G ++ + Y+ L+ E K
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA--NTVTYNTLINAFLRRGEIKEAR 549
Query: 436 ELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMY 495
+LV + + D T YN LI CR+ V KA +++
Sbjct: 550 KLVNEMVFQGSPLDEIT----------------------YNSLIKGLCRAGEVDKARSLF 587
Query: 496 MEMVHYGHAPHMFSVLALISALDDDRMYNE 525
+M+ GHAP S LI+ L M E
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEE 617
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 202/502 (40%), Gaps = 79/502 (15%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K C I A +L M G + Y ++I N+++ A LL EM G
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX-- 166
P T+N ++ C+ D +++A ++ M RG +PD +Y +++ C
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 167 ------------------------------XXXXXXXVDKGIFPDAATYSSLMEALCVEQ 196
GI PD TY+SL+ E
Sbjct: 344 LFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 256
+ A ++ +M G P+ +YT L++ C +G+ +A+++ +EM G
Sbjct: 404 LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS--------ADGL 455
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
P V +N LI C R+ EA+EI R MP G P+ +++++ISG C++ E+
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI----- 510
Query: 317 LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 376
A+W L + + ++ + TY++++N +L G ++ A +L ++M G
Sbjct: 511 ------KHALWLLRDMISEGVVANTV---TYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 377 SSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLV 435
+ Y+ LI GL + +A+ + DG PS +IL+ C + + V
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG--HAPSNISCNILINGLCRSGMVEEAV 619
Query: 436 ELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMY 495
E K+ +R + D T +N LI CR+ + M+
Sbjct: 620 EFQKEMVLRGSTPDIVT----------------------FNSLINGLCRAGRIEDGLTMF 657
Query: 496 MEMVHYGHAPHMFSVLALISAL 517
++ G P + L+S L
Sbjct: 658 RKLQAEGIPPDTVTFNTLMSWL 679
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 113/529 (21%), Positives = 205/529 (38%), Gaps = 84/529 (15%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI-AKG 107
+ +L G +++L MK +G+ E + S++ + L+ EM
Sbjct: 118 IGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYS 177
Query: 108 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
P+ +YN ++ + A + M R + P + ++ V+ FC
Sbjct: 178 CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSAL 237
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
G P++ Y +L+ +L R++EA L EM G PD T+ ++
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
C +A + + M+ +GF PD +TY L++GLC + RV+ A ++ +P
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPD--------DITYGYLMNGLCKIGRVDAAKDLFYRIP 349
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 347
+ P V ++T+I GF G L A KA+ +Y + D TY
Sbjct: 350 K----PEIVIFNTLIHGFVTHGRLDDA---------KAVLSDMVTSYGIVPDVC----TY 392
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 407
+S++ Y EG + AL++ HDM G + +Y++L++G K + EA L +++
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 408 DGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGE 467
DG LK T G
Sbjct: 453 DG--------------------------------------------------LKPNTVG- 461
Query: 468 NKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMS 527
+N LI C+ H + +A ++ EM G P +++ +LIS L +
Sbjct: 462 -------FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 528 WVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEMAMDSLLLD 576
W++ + + ++++ L + + EI ++ EM LD
Sbjct: 515 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 13/194 (6%)
Query: 17 NVNIYNGMIRGFATAAGKSDSESKKVGE-AFQS-----------LKRLCREGRIPEAEQM 64
N YN +I F G+ K V E FQ +K LCR G + +A +
Sbjct: 528 NTVTYNTLINAFLRR-GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 65 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 124
E M G + + +I C ++ A EM+ +G +P +VT+NSL+ CR
Sbjct: 587 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Query: 125 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 184
++ + + R + G+ PD ++N ++S C ++ G P+ T
Sbjct: 647 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 706
Query: 185 YSSLMEALCVEQRL 198
+S L++++ ++ L
Sbjct: 707 WSILLQSIIPQETL 720
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 136/568 (23%), Positives = 241/568 (42%), Gaps = 83/568 (14%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L+ LC++G + E E++L+ + +G+ + TY+ I C ++D A ++ +I +G
Sbjct: 223 LRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP 282
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P V+TYN+L++ C+ +A L M GL PD +YN +I+ +C
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
V G PD TY SL++ LC E + A LF E L G+ P+ + Y L+
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIV 261
G +A L +EM KG +P+ T G+ P I
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 262 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIET 321
T+N LIHG ++E ALEIL M + G+ P+ +Y+++++G C+ + E
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME----- 517
Query: 322 EDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 379
TY ++++ + T++ ++ + AL L +M
Sbjct: 518 -----------TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDA 566
Query: 380 VAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVE-LV 438
V + LI+G K + L + + S Y+I++ + ++ E L
Sbjct: 567 VTFGTLIDGFCKNGDL-DGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 439 KDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 498
++ R L D T Y L++ C++ NV+ Y +EM
Sbjct: 626 QEMVDRCLGPDGYT----------------------YRLMVDGFCKTGNVNLGYKFLLEM 663
Query: 499 VHYGHAPHMFSVLALISAL-DDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSE 557
+ G P + ++ +I+ L +DR+Y E + +I+ ++ + ++ V + +V K E
Sbjct: 664 MENGFIPSLTTLGRVINCLCVEDRVY-EAAGIIHRMVQKGLVPEA----VNTICDVDKKE 718
Query: 558 IYALLDVLAEMAMDS--------LLLDG 577
+ A VL ++ S LL DG
Sbjct: 719 VAAPKLVLEDLLKKSCITYYAYELLFDG 746
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 203/468 (43%), Gaps = 45/468 (9%)
Query: 60 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 119
E ++ M G+ L T++ ++ C + LL ++I +G P++ TYN +
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 120 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 179
C+R +D AV ++ + E+G PDV +YN +I C V++G+
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
PD+ TY++L+ C + A + + + G PD+ TY L++ C GE +A L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 240 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYS 299
+E + KG P+ ++ YN LI GL + EA ++ M E GL P +++
Sbjct: 379 FNEALGKGIKPN--------VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFN 430
Query: 300 TVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLA 356
+++G C++G + D D +M S Y T++ +++ Y
Sbjct: 431 ILVNGLCKMGCVS-----------------DADGLVKVMISKGYFPDIFTFNILIHGYST 473
Query: 357 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 416
+ M+ AL++ M +G Y+ L+NGL K ++ + + G P+
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG--CAPNL 531
Query: 417 TVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM--------------LHLK 461
++ILLE+ C + + L+++ + ++ DA T T + L K
Sbjct: 532 FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Query: 462 NKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFS 509
+ + + YN++I NV A ++ EMV P ++
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/527 (23%), Positives = 217/527 (41%), Gaps = 74/527 (14%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCK-GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG 107
+++L G+ E++L M+ G + E Y + + K+ A + M
Sbjct: 47 IEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYD 106
Query: 108 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
P+V +YN+++ D+A + M +RG++PDV S+ + FC
Sbjct: 107 CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAAL 166
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
+G + Y +++ E +E ++LF +ML GVS T+ +LL
Sbjct: 167 RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVL 226
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAI 260
C G+ + L D++I +G LP+ T G P +
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV 286
Query: 261 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIE 320
+TYN LI+GLC + +EA L M GL P++ +Y+T+I+G+C+ G + A + +
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 321 TEDKAIWWLDEDTYDSLMDSLSYEDT----------------------YSSVMNDYLAEG 358
+ D+ TY SL+D L +E Y++++ +G
Sbjct: 347 AVFNG-FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 359 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTV 418
+ A QL ++MS G + +++L+NGL K +A + + S G+ P
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF--PDIFT 463
Query: 419 YDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLL 478
++IL+ YS + ++A ML N D + T YN L
Sbjct: 464 FNILIHG---------------YSTQLKMENALEILDVMLD--NGVDPDVYT----YNSL 502
Query: 479 IFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 525
+ C++ Y MV G AP++F+ L+ +L R +E
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 141/363 (38%), Gaps = 38/363 (10%)
Query: 183 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 242
Y M+ + ++ EA ++F M P +Y +++ G F +A ++
Sbjct: 77 GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR 136
Query: 243 MIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVI 302
M +G PD + ++ + C R AL +L M G N V+Y TV+
Sbjct: 137 MRDRGITPD--------VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVV 188
Query: 303 SGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQR 362
GF YE + E ++ + SL S T++ ++ +G+++
Sbjct: 189 GGF---------YEENFKAEGYELFGKMLASGVSLCLS-----TFNKLLRVLCKKGDVKE 234
Query: 363 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDIL 422
+L + + G L + Y++ I GL ++ A R + + G P Y+ L
Sbjct: 235 CEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG--PKPDVITYNNL 292
Query: 423 LEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHT--------TMLHLKNKTDGENKTDGG 473
+ C NS+F+ + L D+ T +T M+ L + G+ +G
Sbjct: 293 IYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF 352
Query: 474 M-----YNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSW 528
+ Y LI C ++A ++ E + G P++ LI L + M E +
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQ 412
Query: 529 VIN 531
+ N
Sbjct: 413 LAN 415
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 211/472 (44%), Gaps = 51/472 (10%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC EGR+ EA ++ M KGL +D TY +++ C + SA LLS+M P
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VV Y++++ C+ A + M E+G++P+V +YN +I FC
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+++ I PD T+++L+ A E +L EA L EML + PD +TY ++ C
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
F A H+ D M SP +VT+N +I C RV+E +++LR + GL
Sbjct: 416 RFDDAKHMFDLMA------------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
N +Y+T+I GFC++ L A +L E + D T + L+ Y
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP-DTITCNILL--------YGFCE 514
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
N+ L E AL+L + VAY+++I+G+ K ++ E A D F
Sbjct: 515 NEKLEE-----ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE--------AWDLFC 561
Query: 412 SMPSYTVY-DILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT 470
S+P + V D+ N S F +A + +L K K +G ++
Sbjct: 562 SLPIHGVEPDVQTYNVMISGF---------------CGKSAISDANVLFHKMKDNG-HEP 605
Query: 471 DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 522
D YN LI ++ + K+ + EM G + F++ + + D R+
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRL 657
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 218/504 (43%), Gaps = 79/504 (15%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R R A + M+ + + L+ +++ +I FC+ +K+ + + ++ GF P VV
Sbjct: 118 RMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVV 177
Query: 114 TYNSLVFAYCRRDSVDKA---------------VGILRAMAERGLSPDVDSYNRVISKFC 158
T+N+L+ C D + +A V + M E GL+P V ++N +I+ C
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLC 237
Query: 159 XXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 218
V KG+ D TY +++ +C A +L +M + PD +
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
Query: 219 TYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEE 278
Y+ +++ C G + A +L EM+ K G +P + TYN +I G C R +
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEK--------GIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 279 ALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLM 338
A +LR M E ++P+ ++++ +IS + G+L +A +L E + I+ D TY+S++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP-DTVTYNSMI 408
Query: 339 ----------------DSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYV 380
D ++ D T++++++ Y + +QL ++SR G +++
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 381 AYSVLINGLHKKARTREAKRDLLYIASDGFLSM------PSYTVYDILLEN-CSNSEFKS 433
Y+ LI+G + D L A D F M P +ILL C N + +
Sbjct: 469 TYNTLIHGF--------CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 434 LVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYN 493
+EL + M + D YN++I C+ V +A++
Sbjct: 521 ALELFEVIQMSKIDLDTVA----------------------YNIIIHGMCKGSKVDEAWD 558
Query: 494 MYMEMVHYGHAPHMFSVLALISAL 517
++ + +G P + + +IS
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGF 582
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 151/315 (47%), Gaps = 23/315 (7%)
Query: 14 MALNVNIYNGMIRGFATAAGKSDSE-------SKKVGEAFQSLKRL----CREGRIPEAE 62
+A NV YN MI GF + SD++ +++ + L +EG++ EAE
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 63 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 122
++ + M + +F D TY+S+I FC N+ D A + M SP VVT+N+++ Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVY 442
Query: 123 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 182
CR VD+ + +LR ++ RGL + +YN +I FC + G+ PD
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 183 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 242
T + L+ C ++L EA +LF + + D + Y +++ C + +A+ L
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL--- 559
Query: 243 MIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVI 302
F + G P + TYN +I G C + +A + M + G P+ +Y+T+I
Sbjct: 560 -----FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 303 SGFCQIGELGKAYEL 317
G + GE+ K+ EL
Sbjct: 615 RGCLKAGEIDKSIEL 629
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 45/354 (12%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+ RLC++G +A+ + M KG+ + TY+ +I FC+ + A LL +MI +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
+P V+T+N+L+ A + + +A + M R + PD +YN +I FC
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC----KHNRFD 418
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
D PD T++++++ C +R+ E L RE+ R G+ + TY L++ C
Sbjct: 419 DAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC 478
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVT------GFSPA---------------------IV 261
V A L EMI G PD +T GF V
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 262 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIET 321
YN +IHG+C +V+EA ++ +P G+ P+ +Y+ +ISGFC + A L +
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Query: 322 EDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 375
+D D TY++L+ L G + ++++L +M +G+
Sbjct: 599 KDNG-HEPDNSTYNTLIRGC-------------LKAGEIDKSIELISEMRSNGF 638
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 183/433 (42%), Gaps = 75/433 (17%)
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
+ V N ++ + R + D A+ + R M R + ++ S+N +I FC
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAF---------------DLFREMLRGGVSP 215
G PD T+++L+ LC+E R+SEA LF +M+ G++P
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTP 224
Query: 216 DELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDR 275
+T+ L+N CL G +A L ++M+ KG D +VTY +++G+C +
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID--------VVTYGTIVNGMCKMGD 276
Query: 276 VEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYD 335
+ AL +L M E + P+ V YS +I C+ G A L E +K I + TY+
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP-NVFTYN 335
Query: 336 SLMDSLS----YED------------------TYSSVMNDYLAEGNMQRALQLDHDMSRD 373
++D + D T++++++ + EG + A +L +M
Sbjct: 336 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 374 GYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE-NCSNSEFK 432
V Y+ +I G K R +AK +AS P ++ +++ C
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS------PDVVTFNTIIDVYCRAKRVD 449
Query: 433 SLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAY 492
++L+++ S R L A+TT YN LI C N++ A
Sbjct: 450 EGMQLLREISRRGL-----VANTT-----------------TYNTLIHGFCEVDNLNAAQ 487
Query: 493 NMYMEMVHYGHAP 505
+++ EM+ +G P
Sbjct: 488 DLFQEMISHGVCP 500
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/511 (26%), Positives = 227/511 (44%), Gaps = 52/511 (10%)
Query: 22 NGMIRGFATAAGKSDSESKKVGEAFQSLKR------------LCREGRIPEAEQMLEVMK 69
NG++ FA GK+D + + + R +C+EG + A + E MK
Sbjct: 231 NGLLHRFAKL-GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK 289
Query: 70 CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVD 129
+GL D TY+S+I F + ++D EM P V+TYN+L+ +C+ +
Sbjct: 290 FRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLP 349
Query: 130 KAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLM 189
+ R M GL P+V SY+ ++ FC G+ P+ TY+SL+
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409
Query: 190 EALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFL 249
+A C LS+AF L EML+ GV + +TYT L++ C +A L +M G +
Sbjct: 410 DANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI 469
Query: 250 PDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG 309
P+ + +YNALIHG ++ ALE+L + G+ P+ + Y T I G C +
Sbjct: 470 PN--------LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE 521
Query: 310 ELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHD 369
++ A + E ++ I +SL+ Y+++M+ Y GN L L +
Sbjct: 522 KIEAAKVVMNEMKECGI------KANSLI--------YTTLMDAYFKSGNPTEGLHLLDE 567
Query: 370 MSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSN 428
M + V + VLI+GL K +A D S+ F + ++ +++ C +
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKA-VDYFNRISNDFGLQANAAIFTAMIDGLCKD 626
Query: 429 SEFKSLVELVKDYSMRDLSDDAATAHTTM-------------LHLKNK-TDGENKTDGGM 474
++ ++ L + + L D TA+T++ L L++K + K D
Sbjct: 627 NQVEAATTLFEQMVQKGLVPD-RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLA 685
Query: 475 YNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 505
Y L++ + + KA + EM+ G P
Sbjct: 686 YTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 136/314 (43%), Gaps = 24/314 (7%)
Query: 110 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 169
P +++L +++A+ M + P S N ++ +F
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 170 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 229
+ G P TY+ +++ +C E + A LF EM G+ PD +TY +++
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 230 VGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 289
VG +EM PD ++TYNALI+ C ++ LE R M
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPD--------VITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 290 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 349
GL PN VSYST++ FC+ G + +A + ++ + + E TY+S
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL--------------VPNEYTYTS 407
Query: 350 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 409
+++ GN+ A +L ++M + G + V Y+ LI+GL R +EA+ L+ D
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE--LFGKMDT 465
Query: 410 FLSMPSYTVYDILL 423
+P+ Y+ L+
Sbjct: 466 AGVIPNLASYNALI 479
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 103/259 (39%), Gaps = 24/259 (9%)
Query: 17 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKR----------------LCREGRIPE 60
N+ YN +I GF A + E LK LC +I
Sbjct: 471 NLASYNALIHGFVKAKNMD-----RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEA 525
Query: 61 AEQMLEVMKCKGLFLDERTYSSVI-GWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 119
A+ ++ MK G+ + Y++++ +F + N + H LL EM +VVT+ L+
Sbjct: 526 AKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH-LLDEMKELDIEVTVVTFCVLI 584
Query: 120 FAYCRRDSVDKAVGIL-RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGI 178
C+ V KAV R + GL + + +I C V KG+
Sbjct: 585 DGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Query: 179 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 238
PD Y+SLM+ + + EA L +M G+ D L YT L+ + KA
Sbjct: 645 VPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARS 704
Query: 239 LHDEMIHKGFLPDFVTGFS 257
+EMI +G PD V S
Sbjct: 705 FLEEMIGEGIHPDEVLCIS 723
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 193/437 (44%), Gaps = 37/437 (8%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L C RI EA +++ M G D T+++++ NK A L+ M+ KG
Sbjct: 152 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 211
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P +VTY +++ C+R D A+ +L M + + DV YN +I C
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
KGI PD TY+ L+ LC R S+A L +ML ++PD + + L++A
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 229 LVGEFTKAFHLHDEMIH-KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
G+ +A L+DEM+ K PD +V YN LI G C RVEE +E+ R M
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPD--------VVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED-- 345
+ GL N V+Y+T+I GF Q + A + + + D TY+ L+D L
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP-DIMTYNILLDGLCNNGNV 442
Query: 346 --------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 385
TY++++ G ++ L +S G + V Y+ +
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Query: 386 INGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMR 444
++G +K EA + + DG +P+ Y+ L+ + + + EL+K+
Sbjct: 503 MSGFCRKGLKEEADALFVEMKEDG--PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSC 560
Query: 445 DLSDDAATAH--TTMLH 459
+ DA+T T MLH
Sbjct: 561 GFAGDASTFGLVTNMLH 577
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 126/510 (24%), Positives = 221/510 (43%), Gaps = 57/510 (11%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLD---ERTYSSVIGW------FCNLNKIDSAHTLLSEM 103
CRE + Q L++ GLF D R + S++ + +NK D +L +M
Sbjct: 42 CRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM 101
Query: 104 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 163
G S ++ TY+ + +CRR + A+ IL M + G P + + N +++ FC
Sbjct: 102 QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 161
Query: 164 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 223
V+ G PD T+++L+ L + SEA L M+ G PD +TY +
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 224 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 283
+N C GE A +L ++M KG + +V YN +I GLC +++A ++
Sbjct: 222 INGLCKRGEPDLALNLLNKM-EKGKI-------EADVVIYNTIIDGLCKYKHMDDAFDLF 273
Query: 284 RGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAI--------WWLD----- 330
M G+ P+ +Y+ +IS C G A L + +K I +D
Sbjct: 274 NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333
Query: 331 ------EDTYDSLMDSL-SYEDT--YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 381
E YD ++ S + D Y++++ + ++ +++ +MS+ G + + V
Sbjct: 334 GKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 393
Query: 382 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKD 440
Y+ LI+G + A+ + SDG P Y+ILL+ C+N ++ + + +
Sbjct: 394 YTTLIHGFFQARDCDNAQMVFKQMVSDGV--HPDIMTYNILLDGLCNNGNVETALVVFEY 451
Query: 441 YSMRDLSDDAATAHTTMLHLKNKT----DGEN----------KTDGGMYNLLIFEHCRSH 486
RD+ D T +TTM+ K DG + K + Y ++ CR
Sbjct: 452 MQKRDMKLDIVT-YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Query: 487 NVHKAYNMYMEMVHYGHAPHMFSVLALISA 516
+A +++EM G P+ + LI A
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 211/473 (44%), Gaps = 49/473 (10%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC G++ +A +++ M G +E TY V+ C + A LL +M +
Sbjct: 187 LCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLD 246
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V Y+ ++ C+ S+D A + M +G D+ Y +I FC
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ + I PD +S+L++ E +L EA +L +EM++ G+SPD +TYT L++ C
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ KA H+ D M+ K G P I T+N LI+G C + +++ LE+ R M G+
Sbjct: 367 QLDKANHMLDLMVSK--------GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
+ V+Y+T+I GFC++G+L A EL E + + D +Y L+D L
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP-DIVSYKILLDGLC--------- 468
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
G ++AL++ + + Y+++I+G+ ++ + A D F
Sbjct: 469 ----DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD--------AWDLFC 516
Query: 412 SMPSYTVYDILLENCSNSEFKSLVELVKDYSMR--DLSDDAATAHTTMLHLKNKTDGENK 469
S+P K + VK Y++ L + + +L K + DG +
Sbjct: 517 SLP----------------LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS- 559
Query: 470 TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 522
+G YN+LI H + K+ + E+ G + +V ++ L D R+
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 213/485 (43%), Gaps = 47/485 (9%)
Query: 68 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 127
M+ KG+ + T S +I C K+ A + + ++I G+ P VT+++L+ C
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 128 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 187
V +A+ ++ M E G P + + N +++ C V+ G P+ TY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 188 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 247
+++ +C + + A +L R+M + D + Y+ +++ C G AF+L +EM KG
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 248 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQ 307
F D I+ Y LI G C+ R ++ ++LR M + ++P+ V++S +I F +
Sbjct: 278 FKAD--------IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 308 IGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED---------------------- 345
G+L +A EL E + I D TY SL+D E+
Sbjct: 330 EGKLREAEELHKEMIQRGISP-DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 346 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 405
T++ ++N Y + L+L MS G ++ V Y+ LI G + + AK +
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 406 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 464
S P Y ILL+ C N E + +E+ + + D + + + N +
Sbjct: 449 VSRRV--RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 465 DGEN-------------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 511
++ K D YN++I C+ ++ +A ++ +M GH+P+ +
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 512 ALISA 516
LI A
Sbjct: 567 ILIRA 571
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 196/445 (44%), Gaps = 36/445 (8%)
Query: 22 NGMIRGFATAAGKSDSE---SKKVGEAFQS--------LKRLCREGRIPEAEQMLEVMKC 70
N ++ G SD+ + V FQ LK +C+ G+ A ++L M+
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 71 KGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDK 130
+ + LD YS +I C +D+A L +EM KGF ++ Y +L+ +C D
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 131 AVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLME 190
+LR M +R ++PDV +++ +I F + +GI PD TY+SL++
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 191 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 250
C E +L +A + M+ G P+ T+ L+N C L +M +G +
Sbjct: 361 GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 420
Query: 251 DFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGE 310
D VTYN LI G C L ++E A E+ + M + P+ VSY ++ G C GE
Sbjct: 421 D--------TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 311 LGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDM 370
KA E+ E +K+ LD Y+ ++ + +S ++D A L +
Sbjct: 473 PEKALEI-FEKIEKSKMELDIGIYNIIIHGMC----NASKVDD---------AWDLFCSL 518
Query: 371 SRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE-NCSNS 429
G Y+++I GL KK EA DLL+ + P+ Y+IL+ +
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEA--DLLFRKMEEDGHSPNGCTYNILIRAHLGEG 576
Query: 430 EFKSLVELVKDYSMRDLSDDAATAH 454
+ +L+++ S DA+T
Sbjct: 577 DATKSAKLIEEIKRCGFSVDASTVK 601
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 190/452 (42%), Gaps = 56/452 (12%)
Query: 92 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 151
K D A L EM P ++ ++ L R D + + + M +G++ ++ + +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 152 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 211
+I+ C + G PD T+S+L+ LC+E R+SEA +L M+
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 212 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 271
G P +T L+N CL G+ + A L D M+ TGF P VTY ++ +C
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE--------TGFQPNEVTYGPVLKVMC 223
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDE 331
+ A+E+LR M E + +AV YS +I G C+ G L A+ L E E K + D
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADI 282
Query: 332 DTYDSLMDSLSYED----------------------TYSSVMNDYLAEGNMQRALQLDHD 369
Y +L+ Y +S++++ ++ EG ++ A +L +
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 370 MSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSN 428
M + G V Y+ LI+G K+ + +A L + S G P+ ++IL+ C
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG--CGPNIRTFNILINGYCKA 400
Query: 429 SEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNV 488
+ +EL + S+R + D T YN LI C +
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVT----------------------YNTLIQGFCELGKL 438
Query: 489 HKAYNMYMEMVHYGHAPHMFSVLALISALDDD 520
A ++ EMV P + S L+ L D+
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 207/462 (44%), Gaps = 42/462 (9%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVI-GWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C RI +A +++ M G D T++++I G F + NK A L+ M+ +G P+
Sbjct: 91 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPN 149
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+VTY +V C+R +D A +L M + DV +N +I C
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 209
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
KGI P+ TYSSL+ LC R S+A L +M+ ++P+ +T+ L++A G
Sbjct: 210 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+F +A LHD+MI + PD I TYN+LI+G C DR+++A ++ M
Sbjct: 270 KFVEAEKLHDDMIKRSIDPD--------IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
P+ +Y+T+I GFC+ + EL E + + DT TY++++
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG---DTV-----------TYTTLI 367
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
+G+ A ++ M DG + YS+L++GL + +A Y+ +
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE-I 426
Query: 412 SMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHL---------- 460
+ Y +Y ++E C + +L S++ + + T +T + L
Sbjct: 427 KLDIY-IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 461 ----KNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 498
K K DG D G YN LI H R + + + EM
Sbjct: 486 ALLKKMKEDGP-LPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/528 (23%), Positives = 225/528 (42%), Gaps = 60/528 (11%)
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
E M+ G+ + TY+ +I FC ++I A LL +M+ G+ PS+VT +SL+ YC
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
+ AV ++ M E G PD ++ +I V +G P+ TY
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 186 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
++ LC + AF+L +M + D + + ++++ C A +L EM
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 246 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
KG P+ +VTY++LI LC R +A ++L M E ++PN V+++ +I F
Sbjct: 214 KGIRPN--------VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 306 CQIGELGKAYELKIETEDKAIWWLDED--TYDSLMDSLSYE------------------- 344
+ G+ +A +L + ++I D D TY+SL++
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSI---DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 345 ---DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRD 401
DTY++++ + ++ +L +MS G + V Y+ LI GL A++
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 402 LLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHL 460
+ SDG P Y ILL+ C+N + + +E V DY +
Sbjct: 383 FKQMVSDGV--PPDIMTYSILLDGLCNNGKLEKALE-VFDYMQK---------------- 423
Query: 461 KNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDD 520
E K D +Y +I C++ V ++++ + G P++ + +IS L
Sbjct: 424 -----SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Query: 521 RMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEM 568
R+ E ++ L DS L ++ + A +++ EM
Sbjct: 479 RLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 171/352 (48%), Gaps = 23/352 (6%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ + +A + + M+ KG+ + TYSS+I C+ + A LLS+MI K +P+
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+VT+N+L+ A+ + +A + M +R + PD+ +YN +I+ FC
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
V K FPD TY++L++ C +R+ + +LFREM G+ D +TYT L+ G
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ A + +M+ G PD I+TY+ L+ GLC ++E+ALE+ M + +
Sbjct: 375 DCDNAQKVFKQMVSDGVPPD--------IMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
+ Y+T+I G C+ G++ ++L K + TY++++
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK--------------PNVVTYNTMI 472
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 403
+ ++ +Q A L M DG L Y+ LI H + + A +L+
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA-HLRDGDKAASAELI 523
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 153/388 (39%), Gaps = 73/388 (18%)
Query: 179 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 238
P ++ L+ A+ ++ L +M R G+S + TY L+N C + + A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 239 LHDEMIHKGFLPDFVT---------------------------GFSPAIVTYNALIHGLC 271
L +M+ G+ P VT G+ P +T+ LIHGL
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDE 331
++ EA+ ++ M + G PN V+Y V++G C+ G++ A+ L + E I D
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA-DV 185
Query: 332 DTYDSLMDSLS----YED------------------TYSSVMNDYLAEGNMQRALQLDHD 369
+++++DSL +D TYSS+++ + G A QL D
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 370 MSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNS 429
M + V ++ LI+ K+ + EA++ ++D +++ +
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEK-----------------LHDDMIKRSIDP 288
Query: 430 EFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVH 489
+ + L+ + M D D A M+ + D YN LI C+S V
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVS------KDCFPDLDTYNTLIKGFCKSKRVE 342
Query: 490 KAYNMYMEMVHYGHAPHMFSVLALISAL 517
++ EM H G + LI L
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGL 370
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L LC G++ +A ++ + M+ + LD Y+++I C K+D L + KG
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI 154
P+VVTYN+++ C + + +A +L+ M E G PD +YN +I
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 206/456 (45%), Gaps = 45/456 (9%)
Query: 21 YNGMIRGFATAAGKSDSESKKVGEAFQS------------LKRLCREGRIPEAEQMLEVM 68
YN +I GF + GK + + G+ +S ++ C++G +A + + M
Sbjct: 276 YNILINGF-SKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM 334
Query: 69 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 128
G++ TY+ I C+ +ID A LLS M A P VV+YN+L+ Y +
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKF 390
Query: 129 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 188
+A + + + P + +YN +I C + IFPD TY++L
Sbjct: 391 VEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 450
Query: 189 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 248
++ LS A +++ EMLR G+ PD YT +G+ KAF LH+EM+
Sbjct: 451 VKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA--- 507
Query: 249 LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQI 308
+P + YN I GLC + + +A+E R + +GL P+ V+Y+TVI G+ +
Sbjct: 508 ----TDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEN 563
Query: 309 GELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQL 366
G+ A L YD ++ Y TY ++ + G +++A Q
Sbjct: 564 GQFKMARNL----------------YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQY 607
Query: 367 DHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL-EN 425
+M + G + + ++ L+ G+ K EA R L + +G P+ Y +L+ +N
Sbjct: 608 STEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI--PPNKYSYTMLISKN 665
Query: 426 CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLK 461
C +++ +V+L K+ +++ D T HL+
Sbjct: 666 CDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLE 701
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 123/523 (23%), Positives = 203/523 (38%), Gaps = 89/523 (17%)
Query: 61 AEQML---EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV----- 112
AE+ L E M KG R + V+ + ++ A + MI G P+V
Sbjct: 184 AEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNT 243
Query: 113 ------------------------------VTYNSLVFAYCRRDSVDKAVGILRAMAERG 142
VTYN L+ + + +++A M G
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 303
Query: 143 LSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAF 202
+ S+N +I +C ++ GI+P +TY+ + ALC R+ +A
Sbjct: 304 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA- 362
Query: 203 DLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM----IHKGFLPDFVTGFSP 258
RE+L +PD ++Y L++ +G+F +A L D++ IH P
Sbjct: 363 ---RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH------------P 407
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELK 318
+IVTYN LI GLC +E A + M + P+ ++Y+T++ GF + G L A E+
Sbjct: 408 SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVY 467
Query: 319 IETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDM-SRDGYLS 377
E K I D Y Y++ L G+ +A +L +M + D +
Sbjct: 468 DEMLRKGI---KPDGY-----------AYTTRAVGELRLGDSDKAFRLHEEMVATDHHAP 513
Query: 378 SYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVE 436
Y+V I+GL K +A I G + P + Y ++ N +FK
Sbjct: 514 DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLV--PDHVTYTTVIRGYLENGQFKMARN 571
Query: 437 LVKDYSMRDLSDDAAT--------AHTTMLHLKNKTDGENKTDG-----GMYNLLIFEHC 483
L + + L T A L + E K G +N L++ C
Sbjct: 572 LYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMC 631
Query: 484 RSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEM 526
++ N+ +AY +M G P+ +S LIS D + E+
Sbjct: 632 KAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEV 674
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 33/200 (16%)
Query: 15 ALNVNIYNGMIRGFATAAGKSDSESKKVG---EAFQSLKRLCREGRIPEAEQMLEVMK-- 69
A ++ IYN I G KVG +A + +++ R G +P+ V++
Sbjct: 512 APDLTIYNVRIDGLC-----------KVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGY 560
Query: 70 --------CKGLF---LDERTYSSVIGWF------CNLNKIDSAHTLLSEMIAKGFSPSV 112
+ L+ L +R Y SVI +F +++ A +EM +G P+V
Sbjct: 561 LENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNV 620
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
+T+N+L++ C+ ++D+A L M E G+ P+ SY +ISK C
Sbjct: 621 MTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKE 680
Query: 173 XVDKGIFPDAATYSSLMEAL 192
+DK I PD T+ +L + L
Sbjct: 681 MLDKEIEPDGYTHRALFKHL 700
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 205/462 (44%), Gaps = 55/462 (11%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC EGR+ EA ++ M KGL +D TY +++ C + SA LLS+M P
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VV Y++++ C+ A + M E+G++P+V +YN +I FC
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+++ I PD T+++L+ A E +L EA L EML + PD +TY ++ C
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
F A H+ D M SP +VT+N +I C RV+E +++LR + GL
Sbjct: 416 RFDDAKHMFDLMA------------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS-- 349
N +Y+T+I GFC++ L A +D + ++ DT +
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAA----------------QDLFQEMISHGVCPDTITCNI 507
Query: 350 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 409
++ + ++ AL+L + VAY+++I+G+ K ++ E A D
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE--------AWDL 559
Query: 410 FLSMPSYTVY-DILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN 468
F S+P + V D+ N S F +A + +L K K +G +
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGF---------------CGKSAISDANVLFHKMKDNG-H 603
Query: 469 KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 510
+ D YN LI ++ + K+ + EM G + F++
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 218/504 (43%), Gaps = 79/504 (15%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R R A + M+ + + L+ +++ +I FC+ +K+ + + ++ GF P VV
Sbjct: 118 RMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVV 177
Query: 114 TYNSLVFAYCRRDSVDKA---------------VGILRAMAERGLSPDVDSYNRVISKFC 158
T+N+L+ C D + +A V + M E GL+P V ++N +I+ C
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLC 237
Query: 159 XXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 218
V KG+ D TY +++ +C A +L +M + PD +
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
Query: 219 TYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEE 278
Y+ +++ C G + A +L EM+ K G +P + TYN +I G C R +
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEK--------GIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 279 ALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLM 338
A +LR M E ++P+ ++++ +IS + G+L +A +L E + I + D TY+S++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI-FPDTVTYNSMI 408
Query: 339 ----------------DSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYV 380
D ++ D T++++++ Y + +QL ++SR G +++
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 381 AYSVLINGLHKKARTREAKRDLLYIASDGFLSM------PSYTVYDILLEN-CSNSEFKS 433
Y+ LI+G + D L A D F M P +ILL C N + +
Sbjct: 469 TYNTLIHGF--------CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 434 LVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYN 493
+EL + M + D YN++I C+ V +A++
Sbjct: 521 ALELFEVIQMSKIDLDTVA----------------------YNIIIHGMCKGSKVDEAWD 558
Query: 494 MYMEMVHYGHAPHMFSVLALISAL 517
++ + +G P + + +IS
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGF 582
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 151/315 (47%), Gaps = 23/315 (7%)
Query: 14 MALNVNIYNGMIRGFATAAGKSDSE-------SKKVGEAFQSLKRL----CREGRIPEAE 62
+A NV YN MI GF + SD++ +++ + L +EG++ EAE
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 63 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 122
++ + M + +F D TY+S+I FC N+ D A + M SP VVT+N+++ Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVY 442
Query: 123 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 182
CR VD+ + +LR ++ RGL + +YN +I FC + G+ PD
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 183 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 242
T + L+ C ++L EA +LF + + D + Y +++ C + +A+ L
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL--- 559
Query: 243 MIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVI 302
F + G P + TYN +I G C + +A + M + G P+ +Y+T+I
Sbjct: 560 -----FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 303 SGFCQIGELGKAYEL 317
G + GE+ K+ EL
Sbjct: 615 RGCLKAGEIDKSIEL 629
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 160/356 (44%), Gaps = 49/356 (13%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+ RLC++G +A+ + M KG+ + TY+ +I FC+ + A LL +MI +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
+P V+T+N+L+ A + + +A + M R + PD +YN +I FC
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC----KHNRFD 418
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
D PD T++++++ C +R+ E L RE+ R G+ + TY L++ C
Sbjct: 419 DAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC 478
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVT------GFSPA---------------------IV 261
V A L EMI G PD +T GF V
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 262 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIET 321
YN +IHG+C +V+EA ++ +P G+ P+ +Y+ +ISGFC + A L
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL---- 594
Query: 322 EDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGY 375
+ + D+ D TY++++ L G + ++++L +M +G+
Sbjct: 595 ------------FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 192/470 (40%), Gaps = 73/470 (15%)
Query: 93 IDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNR 152
+D A M+ + V N ++ + R + D A+ + R M R + ++ S+N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 153 VISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAF---------- 202
+I FC G PD T+++L+ LC+E R+SEA
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 203 -----DLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS 257
LF +M+ G++P +T+ L+N CL G +A L ++M+ KG D
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID------ 260
Query: 258 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
+VTY +++G+C + + AL +L M E + P+ V YS +I C+ G A L
Sbjct: 261 --VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 318 KIETEDKAIWWLDEDTYDSLMDSLS----YED------------------TYSSVMNDYL 355
E +K I + TY+ ++D + D T++++++ +
Sbjct: 319 FSEMLEKGI-APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 356 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPS 415
EG + A +L +M V Y+ +I G K R +AK +AS ++
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFN- 436
Query: 416 YTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMY 475
T+ D+ C ++L+++ S R L + T Y
Sbjct: 437 -TIIDVY---CRAKRVDEGMQLLREISRRGLVANTTT----------------------Y 470
Query: 476 NLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 525
N LI C N++ A +++ EM+ +G P + L+ ++ E
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 111/285 (38%), Gaps = 51/285 (17%)
Query: 21 YNGMIRGFATAAGKSDSE-------SKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGL 73
YN MI GF D++ S V + CR R+ E Q+L + +GL
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 74 FLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS------ 127
+ TY+++I FC ++ +++A L EMI+ G P +T N L++ +C +
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 128 -----------------------------VDKAVGILRAMAERGLSPDVDSYNRVISKFC 158
VD+A + ++ G+ PDV +YN +IS FC
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 159 XXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 218
D G PD +TY++L+ + ++ +L EM G S D
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Query: 219 TYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTY 263
T C V DE I + +L + G + +I Y
Sbjct: 644 TIKMAEEIICRVS---------DEEIIENYLRPKINGETSSIPRY 679
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 205/484 (42%), Gaps = 54/484 (11%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF--- 108
CREGR ++E+M+E M+ +GL D T++S I C K+ A + S+M +
Sbjct: 227 FCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL 286
Query: 109 -SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
P+ +TYN ++ +C+ ++ A + ++ E + SYN +
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE 346
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
DKGI P +Y+ LM+ LC LS+A + M R GV PD +TY LL+
Sbjct: 347 TVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGY 406
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
C VG+ A L EM+ LP+ T N L+H L + R+ EA E+LR M
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPN--------AYTCNILLHSLWKMGRISEAEELLRKMN 458
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 347
E G + V+ + ++ G C GEL KA E+ K + +L +S Y
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIV-----KGMRVHGSAALGNLGNS------Y 507
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 407
+++D L E N L + YS L+NGL K R EAK L+
Sbjct: 508 IGLVDDSLIENNC---------------LPDLITYSTLLNGLCKAGRFAEAKN--LFAEM 550
Query: 408 DGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD- 465
G P Y+I + + C + S ++KD + T ++ +L L K
Sbjct: 551 MGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQI 610
Query: 466 -------GENKTDG-----GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLAL 513
E K G YN I C V A N+ EM+ AP++FS L
Sbjct: 611 FEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYL 670
Query: 514 ISAL 517
I A
Sbjct: 671 IEAF 674
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 163/391 (41%), Gaps = 65/391 (16%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ G + +A+ ++ +MK G+ D TY ++ +C++ K+D+A +LL EM+ P+
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
T N L+ + + + +A +LR M E+G D + N ++ C
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 172 -----------------------XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 208
++ PD TYS+L+ LC R +EA +LF EM
Sbjct: 491 GMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Query: 209 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT-------------- 254
+ + PD + Y ++ C G+ + AF + +M KG T
Sbjct: 551 MGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQI 610
Query: 255 -------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTV 301
G SP I TYN I LC ++VE+A +L M + ++PN S+ +
Sbjct: 611 FEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYL 670
Query: 302 ISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQ 361
I FC++ + A E+ ET ++ E YS + N+ LA G +
Sbjct: 671 IEAFCKVPDFDMAQEV-FET--------------AVSICGQKEGLYSLMFNELLAAGQLL 715
Query: 362 RALQLDHDMSRDGYLSSYVAYSVLINGLHKK 392
+A +L + G+ Y L+ L KK
Sbjct: 716 KATELLEAVLDRGFELGTFLYKDLVESLCKK 746
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 121/270 (44%), Gaps = 17/270 (6%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L LC+ GR EA+ + M + L D Y+ I FC KI SA +L +M KG
Sbjct: 531 LNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
S+ TYNSL+ ++ + + G++ M E+G+SP++ +YN I C
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATN 650
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVS---PDELTYTRLLN 225
+ K I P+ ++ L+EA C FD+ +E+ VS E Y+ + N
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIEAFCK----VPDFDMAQEVFETAVSICGQKEGLYSLMFN 706
Query: 226 ACCLVGEFTKAFHLHDEMIHKGF-LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 284
G+ KA L + ++ +GF L F+ Y L+ LC D +E A IL
Sbjct: 707 ELLAAGQLLKATELLEAVLDRGFELGTFL---------YKDLVESLCKKDELEVASGILH 757
Query: 285 GMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
M + G + + VI G ++G +A
Sbjct: 758 KMIDRGYGFDPAALMPVIDGLGKMGNKKEA 787
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 202/491 (41%), Gaps = 80/491 (16%)
Query: 82 SVIGWFCNLNKIDSAHTLLSEMIAKGF---SPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
SV+ F N ID A +++ F PSV YN L+ + + V+ + + M
Sbjct: 80 SVVSIFAKSNHIDKAFPQF-QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDM 138
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
G++P ++N +I C +KG P+ T+ L+ C
Sbjct: 139 VLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLT 198
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 258
+ +L M GV P+++ Y ++++ C G + + ++M +G +PD
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPD------- 251
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGM---PEMGLS-PNAVSYSTVISGFCQIGELGKA 314
IVT+N+ I LC +V +A I M +GL PN+++Y+ ++ GFC++G L A
Sbjct: 252 -IVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDA 310
Query: 315 ---YELKIETEDKA------IW---------WLDEDT----------------YDSLMDS 340
+E E +D A IW +++ +T Y+ LMD
Sbjct: 311 KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDG 370
Query: 341 LSY----------------------EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 378
L TY +++ Y + G + A L +M R+ L +
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Query: 379 YVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELV 438
++L++ L K R EA+ L + G+ + + T I+ C + E +E+V
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKMNEKGY-GLDTVTCNIIVDGLCGSGELDKAIEIV 489
Query: 439 KDYSMRDLSDDAATAH--TTMLHLKNKTDGENK--TDGGMYNLLIFEHCRSHNVHKAYNM 494
K MR + AA + + + L + + EN D Y+ L+ C++ +A N+
Sbjct: 490 K--GMR-VHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Query: 495 YMEMVHYGHAP 505
+ EM+ P
Sbjct: 547 FAEMMGEKLQP 557
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 151/368 (41%), Gaps = 66/368 (17%)
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
P Y+ L+E+ E+R+ L+++M+ G++P T+ L+ A C A L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 240 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYS 299
DEM KG P+ T+ L+ G C ++ LE+L M G+ PN V Y+
Sbjct: 170 FDEMPEKGCKPNE--------FTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYN 221
Query: 300 TVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED-------------- 345
T++S FC+ G + ++ +E + D T++S + +L E
Sbjct: 222 TIVSSFCREGRNDDSEKM-VEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280
Query: 346 ------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 393
TY+ ++ + G ++ A L + + L+S +Y++ + GL +
Sbjct: 281 DEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHG 340
Query: 394 RTREAKRDLLYIASDGFLSMPSYTVYDILLENCSN----SEFKSLVELVKDYSMRDLSDD 449
+ EA+ L + G PS Y+IL++ S+ K++V L+K + D
Sbjct: 341 KFIEAETVLKQMTDKGI--GPSIYSYNILMDGLCKLGMLSDAKTIVGLMK---RNGVCPD 395
Query: 450 AATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFS 509
A T Y L+ +C V A ++ EM+ P+ ++
Sbjct: 396 AVT----------------------YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433
Query: 510 VLALISAL 517
L+ +L
Sbjct: 434 CNILLHSL 441
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 112/283 (39%), Gaps = 45/283 (15%)
Query: 21 YNGMIRGFATAAGKSDSE---SKKVGEAFQS--------LKRLCREGRIPEAEQMLEVMK 69
Y+ ++ G A ++++ ++ +GE Q + C++G+I A ++L+ M+
Sbjct: 527 YSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDME 586
Query: 70 CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVD 129
KG TY+S+I N+I H L+ EM KG SP++ TYN+ + C + V+
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE 646
Query: 130 KAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV--------------- 174
A +L M ++ ++P+V S+ +I FC V
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFN 706
Query: 175 -------------------DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSP 215
D+G Y L+E+LC + L A + +M+ G
Sbjct: 707 ELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGF 766
Query: 216 DELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 258
D +++ +G +A D+M+ + + P
Sbjct: 767 DPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDP 809
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 163/366 (44%), Gaps = 41/366 (11%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
T+ S++ FC +++ A + +M+ G+ P+VV YN+++ C+ VD A+ +L M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
+ G+ PDV +YN +IS C + I+PD T+++L++A E R+
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT---- 254
SEA + + EM+R + PD +TY+ L+ C+ +A + M+ KG PD VT
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 255 -----------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
G VTY LI G C ++ A EI R M G+
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
PN ++Y+ ++ G C G++ KA + + + +D D TY+ ++
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKALVILADMQKNG---MDADIV-----------TYNIII 438
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
G + A + ++ G + Y+ ++ GL+KK REA + DG L
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Query: 412 SMPSYT 417
Y
Sbjct: 499 PNECYV 504
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 182/401 (45%), Gaps = 25/401 (6%)
Query: 64 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 123
+ E M+ G+ + T + ++ FC +++ A + L +MI G PS+VT+ SL+ +C
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 124 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 183
R D V A+ + M G P+V YN +I C GI PD
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
TY+SL+ LC R S+A + M + + PD T+ L++AC G ++A ++EM
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 244 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVIS 303
I + PD IVTY+ LI+GLC R++EA E+ M G P+ V+YS +I+
Sbjct: 283 IRRSLDPD--------IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Query: 304 GFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 363
G+C+ ++ +L E + + + TY+ ++ Y G + A
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGV--------------VRNTVTYTILIQGYCRAGKLNVA 380
Query: 364 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 423
++ M G + + Y+VL++GL + +A L + +G + Y+I++
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA--DIVTYNIII 438
Query: 424 EN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 463
C E ++ + + L D T T ML L K
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 150/331 (45%), Gaps = 30/331 (9%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ ++ A +L M+ G+ D TY+S+I C+ + A ++S M + P
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V T+N+L+ A + V +A M R L PD+ +Y+ +I C
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
V KG FPD TYS L+ C +++ LF EM + GV + +TYT L+ C G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ A + M+ G P I+TYN L+HGLC ++E+AL IL M + G+
Sbjct: 376 KLNVAEEIFRRMVF--------CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKA----IWWLDEDTYDSLMDSLSYEDTY 347
+ V+Y+ +I G C+ GE+ A+++ + IW TY
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIW------------------TY 469
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 378
+++M +G + A L M DG L +
Sbjct: 470 TTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 177/456 (38%), Gaps = 70/456 (15%)
Query: 92 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 151
K+D + L M+ PS+ ++ L+ A + D + + M G+ ++ + N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 152 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 211
+++ FC + G P T+ SL+ C R+ +A +F +M+
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 212 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS-------------- 257
G P+ + Y +++ C + A L + M G PD VT S
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 258 -------------PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISG 304
P + T+NALI RV EA E M L P+ V+YS +I G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 305 FCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQR 362
C L +A E+ + ++ + D TYS ++N Y ++
Sbjct: 301 LCMYSRLDEA----------------EEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 363 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDIL 422
++L +MS+ G + + V Y++LI G + + A+ + G P+ Y++L
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV--HPNIITYNVL 402
Query: 423 LEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFE 481
L C N + + + ++ D + D T YN++I
Sbjct: 403 LHGLCDNGKIEKALVILADMQKNGMDADIVT----------------------YNIIIRG 440
Query: 482 HCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
C++ V A+++Y + G P +++ ++ L
Sbjct: 441 MCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C+ ++ ++ M +G+ + TY+ +I +C K++ A + M+ G P++
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
+TYN L+ C ++KA+ IL M + G+ D+ +YN +I C
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDE 217
+G+ PD TY+++M L + EA LFR+M G+ P+E
Sbjct: 457 LNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 181/391 (46%), Gaps = 33/391 (8%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
G IP+A Q + + + R +++ LN + E++ GF +V +
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
N L+ +C+ ++ A + + +R L P V S+N +I+ +C
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
PD TYS+L+ ALC E ++ A LF EM + G+ P+++ +T L++ GE
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDL 363
Query: 236 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
+ +M+ KG PD IV YN L++G C + A I+ GM GL P+
Sbjct: 364 MKESYQKMLSKGLQPD--------IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 296 VSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED---------- 345
++Y+T+I GFC+ G++ A E++ E + I LD + +L+ + E
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGI-ELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 346 ------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 393
TY+ +M+ + +G+ Q +L +M DG++ S V Y+VL+NGL K
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Query: 394 RTREAKRDLLYIASDGFLSMPSYTVYDILLE 424
+ + A D+L A +P Y+ LLE
Sbjct: 535 QMKNA--DMLLDAMLNIGVVPDDITYNTLLE 563
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 161/366 (43%), Gaps = 60/366 (16%)
Query: 1 MKLLRASFTAALKMALNVNIYNGMIRGFATAAGKSDSES-------KKVGEAFQSLKRL- 52
M++L A F LNV ++N ++ F SD++ + + S L
Sbjct: 229 MEILDAGF------PLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLI 282
Query: 53 ---CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE------- 102
C+ G + E ++ M+ D TYS++I C NK+D AH L E
Sbjct: 283 NGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLI 342
Query: 103 ----------------------------MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 134
M++KG P +V YN+LV +C+ + A I
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 135 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 194
+ M RGL PD +Y +I FC GI D +S+L+ +C
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCK 462
Query: 195 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 254
E R+ +A REMLR G+ PD++TYT +++A C G+ F L EM G +
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV----- 517
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
P++VTYN L++GLC L +++ A +L M +G+ P+ ++Y+T++ G + K
Sbjct: 518 ---PSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKR 574
Query: 315 YELKIE 320
Y K E
Sbjct: 575 YIQKPE 580
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 162/347 (46%), Gaps = 22/347 (6%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+ + C+EG I +A+++ + + + L +++++I +C + +D L +M
Sbjct: 247 MNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRT 306
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P V TY++L+ A C+ + +D A G+ M +RGL P+ + +I
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKE 366
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ KG+ PD Y++L+ C L A ++ M+R G+ PD++TYT L++ C
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G+ A + EM G D V GFS AL+ G+C RV +A LR M
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRV-GFS-------ALVCGMCKEGRVIDAERALREMLR 478
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
G+ P+ V+Y+ ++ FC+ G+ ++L L E D + S+ TY+
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKL-----------LKEMQSDGHVPSVV---TYN 524
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKART 395
++N G M+ A L M G + + Y+ L+ G H+ A +
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANS 571
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 98/249 (39%), Gaps = 39/249 (15%)
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
GF + +N L++ C + +A ++ + + L P VS++T+I+G+C++G L +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 374
+ LK + E D + TYS+++N E M A L +M + G
Sbjct: 295 FRLKHQMEKSRTR---PDVF-----------TYSALINALCKENKMDGAHGLFDEMCKRG 340
Query: 375 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKS 433
+ + V ++ LI+G + K + S G P +Y+ L+ C N + +
Sbjct: 341 LIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGL--QPDIVLYNTLVNGFCKNGDLVA 398
Query: 434 LVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYN 493
+V R L D T Y LI CR +V A
Sbjct: 399 ARNIVDGMIRRGLRPDKIT----------------------YTTLIDGFCRGGDVETALE 436
Query: 494 MYMEMVHYG 502
+ EM G
Sbjct: 437 IRKEMDQNG 445
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 174/349 (49%), Gaps = 26/349 (7%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
CR R+ A L M G T+ S++ FC++N+ A +L+ +++ G+ P+
Sbjct: 124 FCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPN 183
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VV YN+++ + C + V+ A+ +L+ M + G+ PDV +YN +I++
Sbjct: 184 VVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILS 243
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ GI PD T+S+L++ E +L EA + EM++ V+P+ +TY L+N C+ G
Sbjct: 244 DMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHG 303
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+A + + ++ KGF P+ VTYN LI+G C RV++ ++IL M G+
Sbjct: 304 LLDEAKKVLNVLVSKGFFPN--------AVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS-SV 350
+ +Y+T+ G+CQ G+ A E ++ + D Y+ ++
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAA----------------EKVLGRMVSCGVHPDMYTFNI 399
Query: 351 MNDYLAE-GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
+ D L + G + +AL D+ + + + Y+++I GL K + +A
Sbjct: 400 LLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 186/394 (47%), Gaps = 27/394 (6%)
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
G+ D +++++I FC ++ A + L +M+ GF PS+VT+ SLV +C + +A
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 132 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 191
+ ++ + G P+V YN +I C GI PD TY+SL+
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228
Query: 192 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 251
L + + +M+R G+SPD +T++ L++ G+ +A ++EMI +
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQR----- 283
Query: 252 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGEL 311
+P IVTYN+LI+GLC ++EA ++L + G PNAV+Y+T+I+G+C+ +
Sbjct: 284 ---SVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRV 340
Query: 312 GKAYE-LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDM 370
+ L + + D +D DT+ TY+++ Y G A ++ M
Sbjct: 341 DDGMKILCVMSRDG----VDGDTF-----------TYNTLYQGYCQAGKFSAAEKVLGRM 385
Query: 371 SRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNS 429
G +++L++GL + +A L + ++ Y+I+++ C
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK--TVVGIITYNIIIKGLCKAD 443
Query: 430 EFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 463
+ + L +++ +S D T T M+ L+ K
Sbjct: 444 KVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK 477
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 142/301 (47%), Gaps = 29/301 (9%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC +G++ A +L+ MK G+ D TY+S+I + + +LS+M+ G SP
Sbjct: 194 LCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPD 253
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V+T+++L+ Y + + +A M +R ++P++ +YN +I+ C
Sbjct: 254 VITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLN 313
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
V KG FP+A TY++L+ C +R+ + + M R GV D TY L C G
Sbjct: 314 VLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAG 373
Query: 232 EFTKAFHLHDEMIHKGFLPDFVT------GFSP---------------------AIVTYN 264
+F+ A + M+ G PD T G I+TYN
Sbjct: 374 KFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYN 433
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL--KIETE 322
+I GLC D+VE+A + + G+SP+ ++Y T++ G + +A+EL K++ E
Sbjct: 434 IIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
Query: 323 D 323
D
Sbjct: 494 D 494
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 189/449 (42%), Gaps = 40/449 (8%)
Query: 92 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 151
K + A TL +M PS+V ++ L+ A + + + + + R + G+S D+ S+
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 152 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 211
+I FC + G P T+ SL+ C R EA L +++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 212 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 271
G P+ + Y ++++ C G+ A + M G PD +VTYN+LI L
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPD--------VVTYNSLITRLF 230
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDE 331
+ IL M MG+SP+ +++S +I + + G+L +A +
Sbjct: 231 HSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA----------------K 274
Query: 332 DTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 389
Y+ ++ + TY+S++N G + A ++ + + G+ + V Y+ LING
Sbjct: 275 KQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGY 334
Query: 390 HKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKD--------- 440
K R + + L ++ DG + ++T + C +F + +++
Sbjct: 335 CKAKRVDDGMKILCVMSRDG-VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPD 393
Query: 441 -YSMRDLSD---DAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYM 496
Y+ L D D ++ L++ + YN++I C++ V A+ ++
Sbjct: 394 MYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFC 453
Query: 497 EMVHYGHAPHMFSVLALISALDDDRMYNE 525
+ G +P + + + ++ L R++ E
Sbjct: 454 SLALKGVSPDVITYITMMIGLRRKRLWRE 482
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 9/241 (3%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
+EG++ EA++ M + + + TY+S+I C +D A +L+ +++KGF P+ V
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
TYN+L+ YC+ VD + IL M+ G+ D +YN + +C
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
V G+ PD T++ L++ LC ++ +A ++ + +TY ++ C +
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM-PEMGLS 292
A++L F + G SP ++TY ++ GL EA E+ R M E GL
Sbjct: 446 EDAWYL--------FCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLM 497
Query: 293 P 293
P
Sbjct: 498 P 498
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 199/422 (47%), Gaps = 33/422 (7%)
Query: 60 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 119
EA +++ M +G D TY +V+ C ID A LL++M A +VV +N+++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 120 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 179
+ C+ V+ AV + M +G+ P+V +YN +I+ C ++K I
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
P+ T+++L++A E +L EA L EM++ + PD +TY L+N C+ +A +
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 240 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYS 299
M+ K LP+ I TYN LI+G C RVE+ +E+ R M + GL N V+Y+
Sbjct: 386 FKFMVSKDCLPN--------IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 300 TVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL-SYEDTYSS-VMNDYLAE 357
T+I GF Q G+ A + + + D TY L+ L SY ++ V+ YL +
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQMVSNRV-PTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Query: 358 GNMQRAL----QLDHDMSRDGYLSS-------------YVAYSVLINGLHKKARTREAKR 400
M+ + + M + G + V Y+ +I+GL K +EA
Sbjct: 497 SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 401 DLLYIASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMRDLSDDAATAH--TTM 457
+ DG ++P+ Y+ L+ N + + + EL+K+ DA+T T M
Sbjct: 557 LFRKMKEDG--TLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNM 614
Query: 458 LH 459
LH
Sbjct: 615 LH 616
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 167/349 (47%), Gaps = 30/349 (8%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ + A + M+ KG+ + TY+S+I CN + A LLS M+ K +P+
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VVT+N+L+ A+ + + +A + M +R + PD +YN +I+ FC
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
V K P+ TY++L+ C +R+ + +LFREM + G+ + +TYT ++ G
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ A + +M+ D I+TY+ L+HGLC +++ AL I + + + +
Sbjct: 448 DCDSAQMVFKQMVSNRVPTD--------IMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
N Y+T+I G C+ G++G+A++L K D TY++++ L
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP----DVVTYNTMISGLC--------- 546
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKR 400
++ +Q A L M DG L + Y+ LI +A R+ R
Sbjct: 547 ----SKRLLQEADDLFRKMKEDGTLPNSGTYNTLI-----RANLRDCDR 586
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 191/414 (46%), Gaps = 43/414 (10%)
Query: 77 ERTYSSVIGWF--------CNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 128
ER+++S G + ++ K+D A L +M+ PS+V +N L+ A + +
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 129 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 188
+ + + M G+S D+ +Y+ I+ FC + G PD T SSL
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 189 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 248
+ C +R+S+A L +M+ G PD T+T L++ L + ++A L D+M+ +G
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 249 LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQI 308
PD +VTY +++GLC ++ AL +L M + N V ++T+I C+
Sbjct: 220 QPD--------LVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY 271
Query: 309 GELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS----YED------------------T 346
+ A +L E E K I + TY+SL++ L + D T
Sbjct: 272 RHVEVAVDLFTEMETKGIRP-NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 347 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 406
++++++ + EG + A +L +M + + Y++LING R EAK+ ++
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 407 SDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH 459
S L P+ Y+ L+ C + VEL ++ S R L + T +TT++
Sbjct: 391 SKDCL--PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT-YTTIIQ 441
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/549 (22%), Positives = 227/549 (41%), Gaps = 65/549 (11%)
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
E M+ G+ D TYS I FC +++ A +L++M+ G+ P +VT +SL+ YC
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
+ AV ++ M E G PD ++ +I V +G PD TY
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 186 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
+++ LC + A +L +M + + + + ++++ C A L EM
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 246 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
KG P+ +VTYN+LI+ LC R +A +L M E ++PN V+++ +I F
Sbjct: 287 KGIRPN--------VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338
Query: 306 CQIGELGKAYELKIETEDKAIWWLDED--TYDSLM----------------------DSL 341
+ G+L +A +L E ++I D D TY+ L+ D L
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSI---DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 342 SYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRD 401
TY++++N + ++ ++L +MS+ G + + V Y+ +I G + A+
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 402 LLYIASDGFLSMPS-YTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH 459
+ S+ +P+ Y ILL CS Y D T ++
Sbjct: 456 FKQMVSN---RVPTDIMTYSILLHGLCS-------------YGKLD---------TALVI 490
Query: 460 LKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDD 519
K E + + +YN +I C++ V +A++++ + P + + +IS L
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCS 547
Query: 520 DRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEMAMDSLLLDGGK 579
R+ E + L +S L N+ + A +++ EM + D
Sbjct: 548 KRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST 607
Query: 580 CSYAPASRH 588
S H
Sbjct: 608 ISLVTNMLH 616
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 190/425 (44%), Gaps = 60/425 (14%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C+ RI +A ++L+ M+ K D TY+ +IG C+ K+D A +L+++++ P+
Sbjct: 168 FCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPT 227
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V+TY L+ A VD+A+ ++ M RGL PD+ +YN +I C
Sbjct: 228 VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVR 287
Query: 172 XXVDKGIFPD-----------------------------------AATYSSLMEALCVEQ 196
KG PD TYS L+ LC +
Sbjct: 288 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 256
++ EA +L + M G++PD +Y L+ A C G A + MI G LPD
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD----- 402
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
IV YN ++ LC + ++ALEI + E+G SPN+ SY+T+ S G+ +A
Sbjct: 403 ---IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 317 LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 376
+ +E I D D E TY+S+++ EG + A +L DM +
Sbjct: 460 MILEMMSNGI---DPD-----------EITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 377 SSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKS-LV 435
S V Y++++ G K R +A L + +G P+ T Y +L+E + +++ +
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG--CRPNETTYTVLIEGIGFAGYRAEAM 563
Query: 436 ELVKD 440
EL D
Sbjct: 564 ELAND 568
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 202/461 (43%), Gaps = 48/461 (10%)
Query: 58 IPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNS 117
IP+A +++E+++ G D Y+++I FC +N+ID A +L M +K FSP VTYN
Sbjct: 140 IPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198
Query: 118 LVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG 177
++ + C R +D A+ +L + P V +Y +I + +G
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 178 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 237
+ PD TY++++ +C E + AF++ R + G PD ++Y LL A G++ +
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318
Query: 238 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVS 297
L +M F P +VTY+ LI LC ++EEA+ +L+ M E GL+P+A S
Sbjct: 319 KLMTKM--------FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 298 YSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAE 357
Y +I+ FC+ G L D AI +L+ D + + Y++V+
Sbjct: 371 YDPLIAAFCREGRL-----------DVAIEFLETMISDGCLPDIV---NYNTVLATLCKN 416
Query: 358 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 417
G +AL++ + G + +Y+ + + L A +L + S+G P
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI--DPDEI 474
Query: 418 VYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYN 476
Y+ ++ C EL+ D + T YN
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT----------------------YN 512
Query: 477 LLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
+++ C++H + A N+ MV G P+ + LI +
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 144/296 (48%), Gaps = 27/296 (9%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
++ +C+EG + A +M+ ++ KG D +Y+ ++ N K + L+++M ++
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P+VVTY+ L+ CR +++A+ +L+ M E+GL+PD SY+ +I+ FC
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ G PD Y++++ LC + +A ++F ++ G SP+ +Y + +A
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIV 261
G+ +A H+ EM+ G PD +T F P++V
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 262 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
TYN ++ G C R+E+A+ +L M G PN +Y+ +I G G +A EL
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 150/360 (41%), Gaps = 69/360 (19%)
Query: 222 RLLNACCLVGEFTKAFHLHDEMIHKGFLPD------FVTGF------------------- 256
++ + C G + ++ HL + M+ KG+ PD + GF
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153
Query: 257 -SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA- 314
P + YNALI+G C ++R+++A +L M SP+ V+Y+ +I C G+L A
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 315 -----------------YELKIETE------DKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
Y + IE D+A+ +DE L + TY++++
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF---TYNTII 270
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
EG + RA ++ ++ G ++Y++L+ L + + E ++ + + S+
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK-- 328
Query: 412 SMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDD--------AATAHTTMLHLKN 462
P+ Y IL+ C + + + + L+K + L+ D AA L +
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 463 KTDGENKTDGGM-----YNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
+ +DG + YN ++ C++ +A ++ ++ G +P+ S + SAL
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 172/350 (49%), Gaps = 25/350 (7%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C+ + A L M G D T++S+I FC N+++ A +++++M+ G P
Sbjct: 117 FCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD 176
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VV Y +++ + C+ V+ A+ + M G+ PDV Y +++ C
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR 236
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ I PD T+++L++A E + +A +L+ EM+R ++P+ TYT L+N C+ G
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+A + M KG PD +V Y +LI+G C +V++A++I M + GL
Sbjct: 297 CVDEARQMFYLMETKGCFPD--------VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
+ N ++Y+T+I GF Q+G+ A E+ + + + TY+ L+ L Y
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPP-NIRTYNVLLHCLCY-------- 399
Query: 352 NDYLAEGNMQRALQLDHDMSR---DGYLSSYVAYSVLINGLHKKARTREA 398
G +++AL + DM + DG + Y+VL++GL + +A
Sbjct: 400 -----NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 167/361 (46%), Gaps = 25/361 (6%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ G + A + + M+ G+ D Y+S++ CN + A +LL M + P
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V+T+N+L+ A+ + A + M ++P++ +Y +I+ FC
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
KG FPD Y+SL+ C +++ +A +F EM + G++ + +TYT L+ VG
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP--EM 289
+ A + M+ +G P+ I TYN L+H LC+ +V++AL I M EM
Sbjct: 367 KPNVAQEVFSHMVSRGVPPN--------IRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 290 -GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
G++PN +Y+ ++ G C G+L KA + ED MD TY+
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKA------------LMVFEDMRKREMDIGII--TYT 464
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD 408
++ G ++ A+ L + G + V Y+ +I+GL ++ EA + D
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
Query: 409 G 409
G
Sbjct: 525 G 525
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 196/467 (41%), Gaps = 65/467 (13%)
Query: 80 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 139
++ ++ + K D L + G S + T N L+ +C+ A L M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 140 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 199
+ G PD+ ++ +I+ FC V+ GI PD Y++++++LC ++
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 259
A LF +M G+ PD + YT L+N C G + A L M + PD
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD-------- 246
Query: 260 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKI 319
++T+NALI + +A E+ M M ++PN +Y+++I+GFC G + +A ++
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 320 ETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 379
E K + D Y+S++N + + A+++ ++MS+ G +
Sbjct: 307 LMETKGCF---PDVV-----------AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 380 VAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELV 438
+ Y+ LI G + + A+ ++ S G P+ Y++LL C N + K + +
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV--PPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 439 KDYSMRDLSDDAAT--AHTTMLHLKNKTDGENKTDGGMYN------LLIFEH-------- 482
+D R++ A + +LH G YN L++FE
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLH------------GLCYNGKLEKALMVFEDMRKREMDI 458
Query: 483 ------------CRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
C++ V A N++ + G P++ + +IS L
Sbjct: 459 GIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL 505
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 11/244 (4%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C EG + EA QM +M+ KG F D Y+S+I FC K+D A + EM KG + +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+TY +L+ + + + A + M RG+ P++ +YN ++ C
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 172 XXVDK---GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ G+ P+ TY+ L+ LC +L +A +F +M + + +TYT ++ C
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMC 471
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G+ A +L + KG P+ +VTY +I GL EA + R M E
Sbjct: 472 KAGKVKNAVNLFCSLPSKGVKPN--------VVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Query: 289 MGLS 292
G+S
Sbjct: 524 DGVS 527
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 69/387 (17%)
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT-- 254
+ +EA DLF M+ P + +T+LLN + +F +L D + G D T
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 255 -------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 289
GF P IVT+ +LI+G C +R+EEA+ ++ M EM
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 290 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAI------------------WWLDE 331
G+ P+ V Y+T+I C+ G + A L + E+ I W D
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 332 DTYDSLMDSLSYED---TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 388
D+ M + T++++++ ++ EG A +L ++M R + Y+ LING
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 389 LHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLS 447
+ EA++ + + G P Y L+ C + +++ + S + L+
Sbjct: 292 FCMEGCVDEARQMFYLMETKG--CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 448 DDAATAHTTMLHLKNKTDGEN--------------KTDGGMYNLLIFEHCRSHNVHKAYN 493
+ T +TT++ + N + YN+L+ C + V KA
Sbjct: 350 GNTIT-YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 494 MYMEMVHY---GHAPHMFSVLALISAL 517
++ +M G AP++++ L+ L
Sbjct: 409 IFEDMQKREMDGVAPNIWTYNVLLHGL 435
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 183/386 (47%), Gaps = 27/386 (6%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVI-GWFCNLNKIDSAHTLLSEMIAKG 107
L C RI +A +++ M G D T++++I G F + NK A L+ M+ +G
Sbjct: 155 LNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH-NKASEAVALIDRMVQRG 213
Query: 108 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
P +VTY ++V C+R D A+ +L M + +V Y+ VI C
Sbjct: 214 CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 273
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
+KG+ P+ TYSSL+ LC R S+A L +M+ ++P+ +T++ L++A
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
G+ KA L++EMI + P I TY++LI+G C LDR+ EA ++L M
Sbjct: 334 VKKGKLVKAEKLYEEMIKR--------SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI 385
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 347
PN V+Y+T+I+GFC+ + K EL E + + + TY
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL--------------VGNTVTY 431
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 407
+++++ + + A + M G + + Y++L++GL K + +A Y+
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491
Query: 408 DGFLSMPSYTVYDILLEN-CSNSEFK 432
P Y+I++E C ++K
Sbjct: 492 STM--EPDIYTYNIMIEGMCKAGKWK 515
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 179/391 (45%), Gaps = 38/391 (9%)
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
E M+ G+ + TY+ +I FC +++ A LL +M+ G+ P +VT NSL+ +C
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
+ + AV ++ M E G PD ++ +I V +G PD TY
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Query: 186 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
+++ LC A +L +M + + + Y+ ++++ C A +L EM +
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281
Query: 246 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
KG P+ ++TY++LI LC R +A +L M E ++PN V++S +I F
Sbjct: 282 KGVRPN--------VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Query: 306 CQIGELGKAYELKIETEDKAIWWLDED--TYDSLMDSLSYED------------------ 345
+ G+L KA +L E ++I D + TY SL++ D
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSI---DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
Query: 346 ----TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRD 401
TY++++N + + + ++L +MS+ G + + V Y+ LI+G + A+
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 402 LLYIASDGFLSMPSYTVYDILLEN-CSNSEF 431
+ S G P+ Y+ILL+ C N +
Sbjct: 451 FKQMVSVGV--HPNILTYNILLDGLCKNGKL 479
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 180/396 (45%), Gaps = 34/396 (8%)
Query: 72 GLFLDERTYSSVIGW------FCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
G+ R + S+I + +NK D + +M G S ++ TYN L+ +CR
Sbjct: 67 GVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRC 126
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
+ A+ +L M + G PD+ + N +++ FC V+ G PD T+
Sbjct: 127 SRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTF 186
Query: 186 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
++L+ L + + SEA L M++ G PD +TY ++N C G+ A +L ++M
Sbjct: 187 TTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM-- 244
Query: 246 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
+V Y+ +I LC ++AL + M G+ PN ++YS++IS
Sbjct: 245 ------EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 306 CQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQ 365
C G A L + ++ I +L+ T+S++++ ++ +G + +A +
Sbjct: 299 CNYGRWSDASRLLSDMIERKI-------NPNLV-------TFSALIDAFVKKGKLVKAEK 344
Query: 366 LDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL-LYIASDGFLSMPSYTVYDILLE 424
L +M + + YS LING R EAK+ L L I D +P+ Y+ L+
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD---CLPNVVTYNTLIN 401
Query: 425 N-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH 459
C +EL ++ S R L + T +TT++H
Sbjct: 402 GFCKAKRVDKGMELFREMSQRGLVGNTVT-YTTLIH 436
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 199/407 (48%), Gaps = 26/407 (6%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R G++ +A ++L +M+ G+ + ++ I F N+++ A L M G P+VV
Sbjct: 254 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 313
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
TYN ++ YC V++A+ +L M +G PD SY ++ C
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373
Query: 174 V-DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
+ G+ PD TY++L+ L EA ++ G D+L Y+ +++A C G
Sbjct: 374 AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGR 433
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
++A L +EM+ KG P P +VTY A+++G C L V++A ++L+ M G
Sbjct: 434 MSEAKDLINEMLSKGHCP-------PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHK 486
Query: 293 PNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMN 352
PN VSY+ +++G C+ G+ +A E+ +E+ WW + +S+ TYS +M+
Sbjct: 487 PNTVSYTALLNGMCRTGKSLEAREMMNMSEEH--WW----SPNSI--------TYSVIMH 532
Query: 353 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF-L 411
EG + A + +M G+ V ++L+ L + RT EA++ + + G +
Sbjct: 533 GLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 592
Query: 412 SMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTML 458
++ ++T ++ C N E + + ++ D + + D T +TT++
Sbjct: 593 NVVNFTT--VIHGFCQNDELDAALSVLDDMYLINKHADVFT-YTTLV 636
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 122/299 (40%), Gaps = 46/299 (15%)
Query: 52 LCREGRIPEAEQMLEVMKCKG-LFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 110
LC+EGR+ EA+ ++ M KG D TY++V+ FC L ++D A LL M G P
Sbjct: 428 LCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKP 487
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
+ V+Y +L+ CR +A ++ E SP+ +Y+ ++
Sbjct: 488 NTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVV 547
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVS---------------- 214
V KG FP + L+++LC + R EA E L G +
Sbjct: 548 REMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQN 607
Query: 215 -------------------PDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
D TYT L++ G +A L +M+HK G
Sbjct: 608 DELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHK--------G 659
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
P VTY +IH C + +V++ + IL M + Y+ VI C +G+L +A
Sbjct: 660 IDPTPVTYRTVIHRYCQMGKVDDLVAILEKM--ISRQKCRTIYNQVIEKLCVLGKLEEA 716
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 113/250 (45%), Gaps = 11/250 (4%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L+ LCR+GR EA + +E KG ++ +++VI FC +++D+A ++L +M
Sbjct: 566 LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK 625
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
V TY +LV ++ + +A +++ M +G+ P +Y VI ++C
Sbjct: 626 HADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVA 685
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ + Y+ ++E LCV +L EA L ++LR D T L+
Sbjct: 686 ILEKMISRQKC--RTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYL 743
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G A+ + M ++ +PD + L L +V+EA +++ + E
Sbjct: 744 KKGVPLSAYKVACRMFNRNLIPD--------VKMCEKLSKRLVLKGKVDEADKLMLRLVE 795
Query: 289 MG-LSPNAVS 297
G +SP ++
Sbjct: 796 RGHISPQSLK 805
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 116/266 (43%), Gaps = 45/266 (16%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L REG++ EA ++ M KG F + ++ C + A + E + KG + +
Sbjct: 534 LRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAIN 593
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VV + +++ +C+ D +D A+ +L M +I+K
Sbjct: 594 VVNFTTVIHGFCQNDELDAALSVLDDMY-------------LINKHA------------- 627
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
D TY++L++ L + R++EA +L ++ML G+ P +TY +++ C +G
Sbjct: 628 ---------DVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMG 678
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ + ++MI + YN +I LC L ++EEA +L +
Sbjct: 679 KVDDLVAILEKMISR----------QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTAS 728
Query: 292 SPNAVSYSTVISGFCQIGELGKAYEL 317
+A + ++ G+ + G AY++
Sbjct: 729 RSDAKTCYALMEGYLKKGVPLSAYKV 754
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 22/347 (6%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ G+ +A ++ KG +D RT ++++ C K+D A + E++ +G
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V+YN+L+ C + +D+A L M +RGL PD +Y+ +I
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
G+ PD TYS +++ C +R E + F EM+ V P+ + Y L+ A C G
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ A L ++M HKG SP TY +LI G+ + RVEEA + M GL
Sbjct: 660 RLSMALELREDMKHKGI--------SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
PN Y+ +I G+ ++G++ K L E K + + TY+ ++
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH--------------PNKITYTVMI 757
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
Y +GN+ A +L ++M G + + Y I G K+ EA
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 221/495 (44%), Gaps = 36/495 (7%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
GR EA E M +G+ TYS ++ +I A+ +L EM KGF P+V+ Y
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
N+L+ ++ S++KA+ I M +GLS +YN +I +C +
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
G + +++S++ LC A EML +SP T L++ C G+ +K
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 236 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
A L + ++KGF+ D T NAL+HGLC +++EA I + + G +
Sbjct: 489 ALELWFQFLNKGFVVD--------TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 296 VSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYL 355
VSY+T+ISG C +L D+A +LDE L +Y TYS ++
Sbjct: 541 VSYNTLISGCCGKKKL-----------DEAFMFLDEMVKRGLKPD-NY--TYSILICGLF 586
Query: 356 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPS 415
++ A+Q D R+G L YSV+I+G K RT E + + S P+
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV--QPN 644
Query: 416 YTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGM 474
VY+ L+ C + +EL +D + +S ++AT + + + + E
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK---- 700
Query: 475 YNLLIFEHCRSHNVHKAYNMYMEMVH-YGHAPHMFSVLALISALDDDRMY-NEMSW--VI 530
L+FE R + Y ++ YG M V L+ + ++ N++++ +I
Sbjct: 701 ---LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 531 NNTLRSCNLSDSEQL 545
R N++++ +L
Sbjct: 758 GGYARDGNVTEASRL 772
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 218/494 (44%), Gaps = 70/494 (14%)
Query: 34 KSDSESKKVGEAFQSLKRLCREGRIP-------------------EAEQMLEVMKCKGLF 74
K + +K++G+A+ LK + ++G P +A ++ ++M KGL
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 75 LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 134
L TY+++I +C + D+A LL EM++ GF+ + ++ S++ C D A+
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 135 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 194
+ M R +SP +IS C ++KG D T ++L+ LC
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517
Query: 195 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 254
+L EAF + +E+L G D ++Y L++ CC + +AF DEM+ +G PD
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN-- 575
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
TY+ LI GL +++VEEA++ G+ P+ +YS +I G C
Sbjct: 576 ------YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC-------- 621
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLSYEDT--YSSVMNDYLAEGNMQRALQLDHDMSR 372
K E ++ ++ +D +M +T Y+ ++ Y G + AL+L DM
Sbjct: 622 ---KAERTEEG-----QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 373 DGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFK 432
G + Y+ LI G+ +R EAK + +G P+ Y L++ +
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL--EPNVFHYTALIDG-----YG 726
Query: 433 SLVELVK-DYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKA 491
L ++VK + +R++ H+ +H T Y ++I + R NV +A
Sbjct: 727 KLGQMVKVECLLREM-------HSKNVHPNKIT----------YTVMIGGYARDGNVTEA 769
Query: 492 YNMYMEMVHYGHAP 505
+ EM G P
Sbjct: 770 SRLLNEMREKGIVP 783
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 27/295 (9%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L LC G++ EA ++ + + +G +D +Y+++I C K+D A L EM+ +G
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P TY+ L+ + V++A+ G+ PDV +Y+ +I C
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ K + P+ Y+ L+ A C RLS A +L +M G+SP+ TYT L+
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 229 LVGEFTKAFHLHDEMIHKGFLPD------FVTGFS---------------------PAIV 261
++ +A L +EM +G P+ + G+ P +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 262 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
TY +I G V EA +L M E G+ P++++Y I G+ + G + +A++
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 126/272 (46%), Gaps = 26/272 (9%)
Query: 118 LVFAYC---RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 174
L+ YC +RD A+ + +A +G+ P + N +++ V
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSL-VRANEFQKCCEAFDVV 252
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 234
KG+ PD +++ + A C ++ EA LF +M GV+P+ +T+ +++ + G +
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
+AF ++M+ + G P ++TY+ L+ GL R+ +A +L+ M + G PN
Sbjct: 313 EAFMFKEKMVER--------GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 364
Query: 295 AVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDY 354
+ Y+ +I F + G L KA E+K K + SL S TY++++ Y
Sbjct: 365 VIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL---------SLTSS-----TYNTLIKGY 410
Query: 355 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 386
G A +L +M G+ + +++ +I
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 113/268 (42%), Gaps = 35/268 (13%)
Query: 21 YNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREG-------------------RIPEA 61
YN +I G GK KK+ EAF L + + G ++ EA
Sbjct: 543 YNTLISG---CCGK-----KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
Q + K G+ D TYS +I C + + EM++K P+ V YN L+ A
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 181
YCR + A+ + M +G+SP+ +Y +I +G+ P+
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 241
Y++L++ ++ + L REM V P+++TYT ++ G T+A L +
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLN 774
Query: 242 EMIHKGFLPDFVTGFSPAIVTYNALIHG 269
EM KG +PD +TY I+G
Sbjct: 775 EMREKGIVPD--------SITYKEFIYG 794
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 17 NVNIYNGMIRGFATAAG-------KSDSESKKVGEAFQSLKRLCRE----GRIPEAEQML 65
N +YN +IR + + + D + K + + L + R+ EA+ +
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
E M+ +GL + Y+++I + L ++ LL EM +K P+ +TY ++ Y R
Sbjct: 704 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 763
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVI 154
+V +A +L M E+G+ PD +Y I
Sbjct: 764 GNVTEASRLLNEMREKGIVPDSITYKEFI 792
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 22/347 (6%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ G+ +A ++ KG +D RT ++++ C K+D A + E++ +G
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V+YN+L+ C + +D+A L M +RGL PD +Y+ +I
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
G+ PD TYS +++ C +R E + F EM+ V P+ + Y L+ A C G
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ A L ++M HKG SP TY +LI G+ + RVEEA + M GL
Sbjct: 660 RLSMALELREDMKHKGI--------SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
PN Y+ +I G+ ++G++ K L E K + + TY+ ++
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH--------------PNKITYTVMI 757
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
Y +GN+ A +L ++M G + + Y I G K+ EA
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 221/495 (44%), Gaps = 36/495 (7%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
GR EA E M +G+ TYS ++ +I A+ +L EM KGF P+V+ Y
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
N+L+ ++ S++KA+ I M +GLS +YN +I +C +
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
G + +++S++ LC A EML +SP T L++ C G+ +K
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 236 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
A L + ++KGF+ D T NAL+HGLC +++EA I + + G +
Sbjct: 489 ALELWFQFLNKGFVVD--------TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 296 VSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYL 355
VSY+T+ISG C +L D+A +LDE L +Y TYS ++
Sbjct: 541 VSYNTLISGCCGKKKL-----------DEAFMFLDEMVKRGLKPD-NY--TYSILICGLF 586
Query: 356 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPS 415
++ A+Q D R+G L YSV+I+G K RT E + + S P+
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV--QPN 644
Query: 416 YTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGM 474
VY+ L+ C + +EL +D + +S ++AT + + + + E
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK---- 700
Query: 475 YNLLIFEHCRSHNVHKAYNMYMEMVH-YGHAPHMFSVLALISALDDDRMY-NEMSW--VI 530
L+FE R + Y ++ YG M V L+ + ++ N++++ +I
Sbjct: 701 ---LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 531 NNTLRSCNLSDSEQL 545
R N++++ +L
Sbjct: 758 GGYARDGNVTEASRL 772
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 218/494 (44%), Gaps = 70/494 (14%)
Query: 34 KSDSESKKVGEAFQSLKRLCREGRIP-------------------EAEQMLEVMKCKGLF 74
K + +K++G+A+ LK + ++G P +A ++ ++M KGL
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 75 LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 134
L TY+++I +C + D+A LL EM++ GF+ + ++ S++ C D A+
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 135 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 194
+ M R +SP +IS C ++KG D T ++L+ LC
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517
Query: 195 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 254
+L EAF + +E+L G D ++Y L++ CC + +AF DEM+ +G PD
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN-- 575
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
TY+ LI GL +++VEEA++ G+ P+ +YS +I G C
Sbjct: 576 ------YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC-------- 621
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLSYEDT--YSSVMNDYLAEGNMQRALQLDHDMSR 372
K E ++ ++ +D +M +T Y+ ++ Y G + AL+L DM
Sbjct: 622 ---KAERTEEG-----QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 373 DGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFK 432
G + Y+ LI G+ +R EAK + +G P+ Y L++ +
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL--EPNVFHYTALIDG-----YG 726
Query: 433 SLVELVK-DYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKA 491
L ++VK + +R++ H+ +H T Y ++I + R NV +A
Sbjct: 727 KLGQMVKVECLLREM-------HSKNVHPNKIT----------YTVMIGGYARDGNVTEA 769
Query: 492 YNMYMEMVHYGHAP 505
+ EM G P
Sbjct: 770 SRLLNEMREKGIVP 783
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 27/295 (9%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L LC G++ EA ++ + + +G +D +Y+++I C K+D A L EM+ +G
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P TY+ L+ + V++A+ G+ PDV +Y+ +I C
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ K + P+ Y+ L+ A C RLS A +L +M G+SP+ TYT L+
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 229 LVGEFTKAFHLHDEMIHKGFLPD------FVTGFS---------------------PAIV 261
++ +A L +EM +G P+ + G+ P +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 262 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
TY +I G V EA +L M E G+ P++++Y I G+ + G + +A++
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 126/272 (46%), Gaps = 26/272 (9%)
Query: 118 LVFAYC---RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 174
L+ YC +RD A+ + +A +G+ P + N +++ V
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSL-VRANEFQKCCEAFDVV 252
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 234
KG+ PD +++ + A C ++ EA LF +M GV+P+ +T+ +++ + G +
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
+AF ++M+ + G P ++TY+ L+ GL R+ +A +L+ M + G PN
Sbjct: 313 EAFMFKEKMVER--------GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 364
Query: 295 AVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDY 354
+ Y+ +I F + G L KA E+K K + SL S TY++++ Y
Sbjct: 365 VIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL---------SLTSS-----TYNTLIKGY 410
Query: 355 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 386
G A +L +M G+ + +++ +I
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 113/268 (42%), Gaps = 35/268 (13%)
Query: 21 YNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREG-------------------RIPEA 61
YN +I G GK KK+ EAF L + + G ++ EA
Sbjct: 543 YNTLISG---CCGK-----KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
Q + K G+ D TYS +I C + + EM++K P+ V YN L+ A
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 181
YCR + A+ + M +G+SP+ +Y +I +G+ P+
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 241
Y++L++ ++ + L REM V P+++TYT ++ G T+A L +
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLN 774
Query: 242 EMIHKGFLPDFVTGFSPAIVTYNALIHG 269
EM KG +PD +TY I+G
Sbjct: 775 EMREKGIVPD--------SITYKEFIYG 794
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 17 NVNIYNGMIRGFATAAG-------KSDSESKKVGEAFQSLKRLCRE----GRIPEAEQML 65
N +YN +IR + + + D + K + + L + R+ EA+ +
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
E M+ +GL + Y+++I + L ++ LL EM +K P+ +TY ++ Y R
Sbjct: 704 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 763
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVI 154
+V +A +L M E+G+ PD +Y I
Sbjct: 764 GNVTEASRLLNEMREKGIVPDSITYKEFI 792
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 197/452 (43%), Gaps = 78/452 (17%)
Query: 46 FQSLKRLCREGR-IPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI 104
F L R C + R + EA + +MK KG + T + ++ LN+I++A ++M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 105 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX 164
+V T+N ++ C+ + KA G L M G+ P + +YN ++ F
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 165 XXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLL 224
KG PD TY+ ++ +C E R SE + REM G+ PD ++Y L+
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILI 334
Query: 225 NACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 284
C G+ AF DEM+ +G +P F T YN LIHGL +++E A ++R
Sbjct: 335 RGCSNNGDLEMAFAYRDEMVKQGMVPTFYT--------YNTLIHGLFMENKIEAAEILIR 386
Query: 285 GMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYE 344
+ E G+ ++V+Y+ +I+G+CQ G+ KA+ L E I + TY SL+ L +
Sbjct: 387 EIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP-TQFTYTSLIYVLCRK 445
Query: 345 DT----------------------YSSVMNDYLAEGNMQRAL------------------ 364
+ +++M+ + A GNM RA
Sbjct: 446 NKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTY 505
Query: 365 -----------------QLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 407
+L +M R G +++Y+ LI+G KK T+ A ++
Sbjct: 506 NCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA-----FMVR 560
Query: 408 DGFLSM---PSYTVYDILLENCSNSEFKSLVE 436
D LS+ P+ Y+ LL+ S ++ L E
Sbjct: 561 DEMLSLGFNPTLLTYNALLKGLSKNQEGELAE 592
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 114/257 (44%), Gaps = 27/257 (10%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
TY+++I NKI++A L+ E+ KG VTYN L+ YC+ KA + M
Sbjct: 364 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM 423
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
G+ P +Y +I C V KG+ PD ++LM+ C +
Sbjct: 424 MTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNM 483
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT---- 254
AF L +EM ++PD++TY L+ C G+F +A L EM +G PD ++
Sbjct: 484 DRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTL 543
Query: 255 -----------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
GF+P ++TYNAL+ GL E A E+LR M G+
Sbjct: 544 ISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGI 603
Query: 292 SPNAVSYSTVISGFCQI 308
PN S+ +VI +
Sbjct: 604 VPNDSSFCSVIEAMSNL 620
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 188/449 (41%), Gaps = 50/449 (11%)
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
+ S + ++ LV C+ VD+A+ M E+G P ++ N +++
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV 211
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
I + T++ ++ LC E +L +A M G+ P +TY L+
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
L G A + EM KGF PD + TYN ++ +C R A E+LR M E
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPD--------MQTYNPILSWMCNEGR---ASEVLREMKE 320
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED--- 345
+GL P++VSY+ +I G G+L A+ + E + + TY++L+ L E+
Sbjct: 321 IGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFY-TYNTLIHGLFMENKIE 379
Query: 346 -------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 386
TY+ ++N Y G+ ++A L +M DG + Y+ LI
Sbjct: 380 AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI 439
Query: 387 NGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMRD 445
L +K +TREA D L+ G P + + L++ +C+ L+K+ M
Sbjct: 440 YVLCRKNKTREA--DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 446 LSDDAATAHTTMLHLKNKTDGEN-------------KTDGGMYNLLIFEHCRSHNVHKAY 492
++ D T + M L + E K D YN LI + + + A+
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF 557
Query: 493 NMYMEMVHYGHAPHMFSVLALISALDDDR 521
+ EM+ G P + + AL+ L ++
Sbjct: 558 MVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 195/466 (41%), Gaps = 66/466 (14%)
Query: 19 NIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPE------------------ 60
I+N ++ + T+ S A++ LK++ + G +P
Sbjct: 373 KIFNSLVHAYCTSGDHS--------YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSL 424
Query: 61 -------AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
AE+ M G+ L++ SS C+ K + A +++ EMI +GF P
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
TY+ ++ C ++ A + M GL DV +Y ++ FC
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
+ G P+ TY++L+ A +++S A +LF ML G P+ +TY+ L++ C G+
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFS--------PAIVTYNALIHGLCFLDRVEEALEILRG 285
KA + + M +PD F P +VTY AL+ G C RVEEA ++L
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 286 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMD---SLS 342
M G PN + Y +I G C++G+L +A E+K E + + TY SL+D +
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG-FPATLYTYSSLIDRYFKVK 723
Query: 343 YEDTYSSVMNDYLAE-------------------GNMQRALQLDHDMSRDGYLSSYVAYS 383
+D S V++ L G A +L M G + V Y+
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 384 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNS 429
+I+G + L + S G P+Y Y +L+++C +
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGV--APNYVTYRVLIDHCCKN 827
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/505 (24%), Positives = 202/505 (40%), Gaps = 66/505 (13%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC EA L M+ + TYS+++ N ++ +L+ M+ +G PS
Sbjct: 312 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 371
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX------ 165
+NSLV AYC A +L+ M + G P YN +I C
Sbjct: 372 PKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDL 431
Query: 166 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
+ G+ + SS LC + +AF + REM+ G PD TY+++LN
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSP 258
C + AF L +EM G + D T G +P
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA---Y 315
+VTY ALIH +V A E+ M G PN V+YS +I G C+ G++ KA +
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 316 ELKIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLAEGNMQRALQLDHDMSR 372
E ++D D D Y D S TY ++++ + ++ A +L MS
Sbjct: 612 ERMCGSKDVP----DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667
Query: 373 DGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFK 432
+G + + Y LI+GL K + EA+ ++ GF P+ T+Y +
Sbjct: 668 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF---PA-TLY----------TYS 713
Query: 433 SLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAY 492
SL++ +DL A+ + ML + + +Y +I C+ +AY
Sbjct: 714 SLIDRYFKVKRQDL---ASKVLSKML------ENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 493 NMYMEMVHYGHAPHMFSVLALISAL 517
+ M G P++ + A+I
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGF 789
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 152/353 (43%), Gaps = 28/353 (7%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L C+ R+ EA ++L+ M +G ++ Y ++I C + K+D A + +EM GF
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
++ TY+SL+ Y + D A +L M E +P+V Y +I C
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+KG P+ TY+++++ + ++ +L M GV+P+ +TY L++ CC
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G A +L +EM + P G+ I +N +E +E L + E
Sbjct: 826 KNGALDVAHNLLEEM-KQTHWPTHTAGYRKVIEGFN------------KEFIESLGLLDE 872
Query: 289 MG---LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 345
+G +P Y +I + L A L E + +D Y
Sbjct: 873 IGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD------------YSS 920
Query: 346 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
TY+S++ ++ A QL +M++ G + ++ LI GL + ++ EA
Sbjct: 921 TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 167/452 (36%), Gaps = 103/452 (22%)
Query: 57 RIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYN 116
R+ A + M L +D T C + K A TL+ + F P V Y
Sbjct: 250 RLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYT 306
Query: 117 SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 176
L+ C ++A+ L M P+V +Y+ ++ + +
Sbjct: 307 KLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMME 366
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC--------- 227
G +P ++SL+ A C S A+ L ++M++ G P + Y L+ +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 228 --------------------------------CLVGEFTKAFHLHDEMIHKGFLPDFVT- 254
C G++ KAF + EMI +GF+PD T
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 255 --------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G + TY ++ C +E+A + M E
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
+G +PN V+Y+ +I + + ++ A EL ET L E +++ TYS
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANEL-FET------MLSEGCLPNIV-------TYS 592
Query: 349 SVMNDYLAEGNMQRALQLDHDMSR-------DGYLSSY---------VAYSVLINGLHKK 392
++++ + G +++A Q+ M D Y Y V Y L++G K
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 393 ARTREAKRDLLYIASDGFLSMPSYTVYDILLE 424
R EA++ L ++ +G P+ VYD L++
Sbjct: 653 HRVEEARKLLDAMSMEG--CEPNQIVYDALID 682
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 170/430 (39%), Gaps = 47/430 (10%)
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
G+ + YN+LV R D L+ + + + N ++ K C
Sbjct: 160 GYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIA 219
Query: 167 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
D P +TY+ L++A RL A + REM + D T +
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 279
Query: 227 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 286
C VG++ +A L + + F+PD V Y LI GLC EEA++ L M
Sbjct: 280 LCKVGKWREALTLVET---ENFVPD--------TVFYTKLISGLCEASLFEEAMDFLNRM 328
Query: 287 PEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDT 346
PN V+YST++ G +LG+ + + E Y S
Sbjct: 329 RATSCLPNVVTYSTLLCGCLNKKQLGRCKRV-------LNMMMMEGCYPS-------PKI 374
Query: 347 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 406
++S+++ Y G+ A +L M + G++ YV Y++LI + + DLL +A
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC--DLLDLA 432
Query: 407 SDGFLSMPSYTVY--DILLEN-----CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH 459
+ M + V I + + CS +++ ++++ + D +T + +
Sbjct: 433 EKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNY 492
Query: 460 LKNKTDG-------ENKTDGGM------YNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPH 506
L N + E GG+ Y +++ C++ + +A + EM G P+
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552
Query: 507 MFSVLALISA 516
+ + ALI A
Sbjct: 553 VVTYTALIHA 562
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ G+ EA +++++M+ KG + TY+++I F + KI++ LL M +KG +P+
Sbjct: 754 LCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 813
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VTY L+ C+ ++D A +L M + Y +VI F
Sbjct: 814 YVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEI 873
Query: 172 XXVDKGIFPD-----------------------------------AATYSSLMEALCVEQ 196
D F ++TY+SL+E+LC+
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
++ AF LF EM + GV P+ ++ L+ + ++A L D + H
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 982
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 135/582 (23%), Positives = 246/582 (42%), Gaps = 69/582 (11%)
Query: 12 LKMALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCK 71
+K+ + ++ GM++ + S E K+ A +K+ + E Q LE++
Sbjct: 64 MKLDDAIGLFGGMVK---SRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVH-- 118
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
GL+ TY+ +I FC ++I A LL +M+ G+ PS+VT +SL+ YC + A
Sbjct: 119 GLY----TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 132 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 191
V ++ M E G PD ++ +I V +G P+ TY ++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 192 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 251
LC A +L +M + D + + ++++ C A +L EM KG P+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 252 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGEL 311
+VTY++LI LC R +A ++L M E ++PN V+++ +I F + G+
Sbjct: 295 --------VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 312 GKAYELKIETEDKAIWWLDED--TYDSLMDSLSYED----------------------TY 347
+A +L + ++I D D TY+SL++ D TY
Sbjct: 347 VEAEKLYDDMIKRSI---DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 407
++++ + ++ +L +MS G + V Y+ LI GL A++ + S
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 408 DGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDG 466
DG P Y ILL+ C+N + + +E V DY +
Sbjct: 464 DGV--PPDIMTYSILLDGLCNNGKLEKALE-VFDYMQK---------------------S 499
Query: 467 ENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEM 526
E K D +Y +I C++ V ++++ + G P++ + +IS L R+ E
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 527 SWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEM 568
++ L +S L ++ + A +++ EM
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 188/425 (44%), Gaps = 36/425 (8%)
Query: 60 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 119
EA +++ M +G + TY V+ C D A LL++M A VV +N+++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 120 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 179
+ C+ VD A+ + + M +G+ P+V +Y+ +IS C ++K I
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
P+ T+++L++A E + EA L+ +M++ + PD TY L+N C+ KA +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 240 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYS 299
+ M+ K PD +VTYN LI G C RVE+ E+ R M GL + V+Y+
Sbjct: 388 FEFMVSKDCFPD--------VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 300 TVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDT------------- 346
T+I G G+ A ++ + + D TY L+D L
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPP-DIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 347 ---------YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTRE 397
Y++++ G + L +S G + V Y+ +I+GL K +E
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 398 AKRDLLYIASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMRDLSDDAATAH-- 454
A L + DG +P+ Y+ L+ + + + + EL+++ DA+T
Sbjct: 559 AYALLKKMKEDG--PLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
Query: 455 TTMLH 459
MLH
Sbjct: 617 ANMLH 621
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 222/490 (45%), Gaps = 54/490 (11%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
LK LCR +A +L M+ L D +Y++VI FC +++ A L +EM G
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
S S+VT+ L+ A+C+ +D+A+G L+ M GL D+ Y +I FC
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+++G P A TY++L+ C +L EA ++F M+ GV P+ TYT L++ C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
VG+ +A L + MI K P VTYN +I+ LC V +A+EI+ M +
Sbjct: 329 GVGKTKEALQLLNLMIEK--------DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYE-LKIETEDKAIWWLDEDTYDSLMDSLSYED-- 345
P+ ++Y+ ++ G C G+L +A + L + +D + D +Y++L+ L E+
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440
Query: 346 --------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 385
T + ++N L G++ +A++L +S + + Y+ +
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500
Query: 386 INGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRD 445
I+G K AK L + PS Y+ LL + L K+ S+
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRVSEL--QPSVFDYNCLLSS-----------LCKEGSL-- 545
Query: 446 LSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 505
D A M N D +N++I ++ ++ A ++ + M G +P
Sbjct: 546 --DQAWRLFEEMQR------DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597
Query: 506 HMFSVLALIS 515
+F+ LI+
Sbjct: 598 DLFTYSKLIN 607
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/515 (23%), Positives = 215/515 (41%), Gaps = 46/515 (8%)
Query: 74 FLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVG 133
F++ + S ++ + + K A +L+ M+ +GF+ +V +N L+ CR KAV
Sbjct: 104 FINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVS 163
Query: 134 ILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 193
+LR M L PDV SYN VI FC G T+ L++A C
Sbjct: 164 LLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC 223
Query: 194 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 253
++ EA +EM G+ D + YT L+ C GE + L DE++ +
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER------- 276
Query: 254 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGK 313
G SP +TYN LI G C L +++EA EI M E G+ PN +Y+ +I G C +G+ +
Sbjct: 277 -GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 314 AYEL-----KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDH 368
A +L + + E A+ TY+ ++N +G + A+++
Sbjct: 336 ALQLLNLMIEKDEEPNAV-------------------TYNIIINKLCKDGLVADAVEIVE 376
Query: 369 DMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CS 427
M + + Y++L+ GL K EA + L + D + P Y+ L+ C
Sbjct: 377 LMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCK 436
Query: 428 NSEFKSLVEL-------------VKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGM 474
+ +++ V + + + A + M K +D + +
Sbjct: 437 ENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDT 496
Query: 475 YNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTL 534
Y +I C++ ++ A + +M P +F L+S+L + ++ +
Sbjct: 497 YTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ 556
Query: 535 RSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEMA 569
R N D ++ + ++ +I + +L M+
Sbjct: 557 RDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 170/386 (44%), Gaps = 48/386 (12%)
Query: 17 NVNIYNGMIRGFATAAGKS-------------DSESKKVGEAFQSLKRLCREGRIPEAEQ 63
NV Y G+I G GK+ D E V + +LC++G + +A +
Sbjct: 316 NVYTYTGLIDGLC-GVGKTKEALQLLNLMIEKDEEPNAVTYNI-IINKLCKDGLVADAVE 373
Query: 64 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG--FSPSVVTYNSLVFA 121
++E+MK + D TY+ ++G C +D A LL M+ P V++YN+L+
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 181
C+ + + +A+ I + E+ + D + N +++ D I +
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 241
+ TY+++++ C L+ A L +M + P Y LL++ C G +A+ L +
Sbjct: 494 SDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFE 553
Query: 242 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTV 301
EM PD +V++N +I G ++ A +L GM GLSP+ +YS +
Sbjct: 554 EMQRDNNFPD--------VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Query: 302 ISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY--SSVMNDYLAEGN 359
I+ F ++G L D+AI + +D ++DS D + SV+ +++G
Sbjct: 606 INRFLKLGYL-----------DEAISF-----FDKMVDSGFEPDAHICDSVLKYCISQGE 649
Query: 360 MQRALQL-----DHDMSRDGYLSSYV 380
+ +L D D+ D L+ V
Sbjct: 650 TDKLTELVKKLVDKDIVLDKELTCTV 675
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 14/209 (6%)
Query: 13 KMALNVNIYNGMIRGFATAA----GKSDSESKKVGEAFQS-------LKRLCREGRIPEA 61
K+ N + Y MI GF K +V E S L LC+EG + +A
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
++ E M+ F D +++ +I I SA +LL M G SP + TY+ L+
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR 608
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 181
+ + +D+A+ M + G PD + V+ VDK I D
Sbjct: 609 FLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLD 668
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREMLR 210
++M+ +C S DL + +LR
Sbjct: 669 KELTCTVMDYMCNS---SANMDLAKRLLR 694
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 196/435 (45%), Gaps = 39/435 (8%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
+E TYS+V+ C K++ A L K PSVV++NS++ YC+ VD A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 195
+ + GL P V S+N +I+ C G+ PD+ TY+ L + +
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
+S A+++ R+ML G+SPD +TYT LL C +G L +M+ +GF +
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN---- 361
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
+I+ + ++ GLC R++EAL + M GLSP+ V+YS VI G C++G+ A
Sbjct: 362 ---SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 316 ELKIETEDKAIWWLDEDTYD----------------SLMDSL-SYEDT-----YSSVMND 353
L E DK I + T+ SL+DSL S +T Y+ V++
Sbjct: 419 WLYDEMCDKRI-LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 477
Query: 354 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM 413
Y G ++ AL+L + G S ++ LI G K EA++ L I G
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGL--A 535
Query: 414 PSYTVYDILLE---NCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT 470
PS Y L++ NC N+ KS+ EL ++ + T L EN
Sbjct: 536 PSVVSYTTLMDAYANCGNT--KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCN 593
Query: 471 DGGMYNLLIFEHCRS 485
+ IFE C+
Sbjct: 594 H--VLRERIFEKCKQ 606
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/565 (22%), Positives = 229/565 (40%), Gaps = 111/565 (19%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LCR+ ++ +A L + K + +++S++ +C L +D A + ++ G PS
Sbjct: 197 LCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPS 256
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V ++N L+ C S+ +A+ + M + G+ PD +YN + F
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 316
Query: 172 XXVDKGIFPDAATY------------------------------------SSLMEALCVE 195
+DKG+ PD TY S ++ LC
Sbjct: 317 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT- 254
R+ EA LF +M G+SPD + Y+ +++ C +G+F A L+DEM K LP+ T
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 436
Query: 255 --------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G + IV YN +I G +EEALE+ + + E
Sbjct: 437 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
G++P+ +++++I G+C+ + +A ++ LD L S+ +Y+
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKI-----------LDVIKLYGLAPSVV---SYT 542
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL-----HKKA----RTR--- 396
++M+ Y GN + +L +M +G + V YSV+ GL H+ R R
Sbjct: 543 TLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 602
Query: 397 EAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAAT--- 452
+ K+ L + S+G P Y+ +++ C ++ R+L +AT
Sbjct: 603 KCKQGLRDMESEGI--PPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNI 660
Query: 453 -------------AHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMV 499
A + + L+ + +K Y LI HC + A ++ +++
Sbjct: 661 LIDSLCVYGYIRKADSFIYSLQEQNVSLSKF---AYTTLIKAHCVKGDPEMAVKLFHQLL 717
Query: 500 HYGHAPHMFSVLALISALDDDRMYN 524
H G + A+I+ L + N
Sbjct: 718 HRGFNVSIRDYSAVINRLCRRHLMN 742
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 165/378 (43%), Gaps = 43/378 (11%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L LC+ GRI EA + MK GL D YS VI C L K D A L EM K
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P+ T+ +L+ C++ + +A +L ++ G + D+ YN VI +
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
++ GI P AT++SL+ C Q ++EA + + G++P ++YT L++A
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC-----------FLDRV- 276
G L EM + G P VTY+ + GLC +R+
Sbjct: 550 NCGNTKSIDELRREMKAE--------GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 277 EEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDS 336
E+ + LR M G+ P+ ++Y+T+I C++ L A+ +E TY+
Sbjct: 602 EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVF-LEIMKSRNLDASSATYNI 660
Query: 337 LMDSLSY----------------------EDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 374
L+DSL + Y++++ + +G+ + A++L H + G
Sbjct: 661 LIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Query: 375 YLSSYVAYSVLINGLHKK 392
+ S YS +IN L ++
Sbjct: 721 FNVSIRDYSAVINRLCRR 738
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 191/434 (44%), Gaps = 52/434 (11%)
Query: 99 LLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 158
L E + + + + ++ L+F R VD ++ IL+ M ++ L+ SYN V+ F
Sbjct: 111 LQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF- 169
Query: 159 XXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 218
DK + TYS++++ LC +Q+L +A R + P +
Sbjct: 170 --RETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVV 223
Query: 219 TYTRLLNACCLVG--EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRV 276
++ +++ C +G + K+F F G P++ ++N LI+GLC + +
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSF----------FCTVLKCGLVPSVYSHNILINGLCLVGSI 273
Query: 277 EEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDS 336
EALE+ M + G+ P++V+Y+ + GF +G + A+E+ + DK L D
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG---LSPDVI-- 328
Query: 337 LMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY-LSSYVAYSVLINGLHKKART 395
TY+ ++ GN+ L L DM G+ L+S + SV+++GL K R
Sbjct: 329 ---------TYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 379
Query: 396 REAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAH 454
EA + +DG P Y I++ C +F + L + + + ++ T
Sbjct: 380 DEALSLFNQMKADGL--SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 455 TTMLHLKNK--------------TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVH 500
+L L K + GE D +YN++I + +S + +A ++ ++
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGET-LDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 501 YGHAPHMFSVLALI 514
G P + + +LI
Sbjct: 497 TGITPSVATFNSLI 510
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%)
Query: 43 GEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE 102
G ++ + RE + +Q L M+ +G+ D+ TY+++I + C + + A L
Sbjct: 586 GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645
Query: 103 MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 162
M ++ S TYN L+ + C + KA + ++ E+ +S +Y +I C
Sbjct: 646 MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705
Query: 163 XXXXXXXXXXXVDKGIFPDAATYSSLMEALC 193
+ +G YS+++ LC
Sbjct: 706 PEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 185/390 (47%), Gaps = 37/390 (9%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
+E TYS+V+ C K++ A L K PSVV++NS++ YC+ VD A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 195
+ + GL P V S+N +I+ C G+ PD+ TY+ L + +
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
+S A+++ R+ML G+SPD +TYT LL C +G L +M+ +GF +
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN---- 361
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
+I+ + ++ GLC R++EAL + M GLSP+ V+YS VI G C++G+ A
Sbjct: 362 ---SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 316 ELKIETEDKAIWWLDEDTYD----------------SLMDSL-SYEDT-----YSSVMND 353
L E DK I + T+ SL+DSL S +T Y+ V++
Sbjct: 419 WLYDEMCDKRI-LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 477
Query: 354 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM 413
Y G ++ AL+L + G S ++ LI G K EA++ L I G
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGL--A 535
Query: 414 PSYTVYDILLE---NCSNSEFKSLVELVKD 440
PS Y L++ NC N+ KS+ EL ++
Sbjct: 536 PSVVSYTTLMDAYANCGNT--KSIDELRRE 563
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/565 (22%), Positives = 229/565 (40%), Gaps = 111/565 (19%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LCR+ ++ +A L + K + +++S++ +C L +D A + ++ G PS
Sbjct: 197 LCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPS 256
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V ++N L+ C S+ +A+ + M + G+ PD +YN + F
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 316
Query: 172 XXVDKGIFPDAATY------------------------------------SSLMEALCVE 195
+DKG+ PD TY S ++ LC
Sbjct: 317 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT- 254
R+ EA LF +M G+SPD + Y+ +++ C +G+F A L+DEM K LP+ T
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 436
Query: 255 --------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G + IV YN +I G +EEALE+ + + E
Sbjct: 437 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
G++P+ +++++I G+C+ + +A ++ LD L S+ +Y+
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKI-----------LDVIKLYGLAPSVV---SYT 542
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL-----HKKA----RTR--- 396
++M+ Y GN + +L +M +G + V YSV+ GL H+ R R
Sbjct: 543 TLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 602
Query: 397 EAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAAT--- 452
+ K+ L + S+G P Y+ +++ C ++ R+L +AT
Sbjct: 603 KCKQGLRDMESEGI--PPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNI 660
Query: 453 -------------AHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMV 499
A + + L+ + +K Y LI HC + A ++ +++
Sbjct: 661 LIDSLCVYGYIRKADSFIYSLQEQNVSLSKF---AYTTLIKAHCVKGDPEMAVKLFHQLL 717
Query: 500 HYGHAPHMFSVLALISALDDDRMYN 524
H G + A+I+ L + N
Sbjct: 718 HRGFNVSIRDYSAVINRLCRRHLMN 742
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 165/378 (43%), Gaps = 43/378 (11%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L LC+ GRI EA + MK GL D YS VI C L K D A L EM K
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P+ T+ +L+ C++ + +A +L ++ G + D+ YN VI +
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
++ GI P AT++SL+ C Q ++EA + + G++P ++YT L++A
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC-----------FLDRV- 276
G L EM + G P VTY+ + GLC +R+
Sbjct: 550 NCGNTKSIDELRREMKAE--------GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 277 EEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDS 336
E+ + LR M G+ P+ ++Y+T+I C++ L A+ +E TY+
Sbjct: 602 EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVF-LEIMKSRNLDASSATYNI 660
Query: 337 LMDSLSY----------------------EDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 374
L+DSL + Y++++ + +G+ + A++L H + G
Sbjct: 661 LIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Query: 375 YLSSYVAYSVLINGLHKK 392
+ S YS +IN L ++
Sbjct: 721 FNVSIRDYSAVINRLCRR 738
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 191/434 (44%), Gaps = 52/434 (11%)
Query: 99 LLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 158
L E + + + + ++ L+F R VD ++ IL+ M ++ L+ SYN V+ F
Sbjct: 111 LQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF- 169
Query: 159 XXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 218
DK + TYS++++ LC +Q+L +A R + P +
Sbjct: 170 --RETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVV 223
Query: 219 TYTRLLNACCLVG--EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRV 276
++ +++ C +G + K+F F G P++ ++N LI+GLC + +
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSF----------FCTVLKCGLVPSVYSHNILINGLCLVGSI 273
Query: 277 EEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDS 336
EALE+ M + G+ P++V+Y+ + GF +G + A+E+ + DK L D
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG---LSPDVI-- 328
Query: 337 LMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY-LSSYVAYSVLINGLHKKART 395
TY+ ++ GN+ L L DM G+ L+S + SV+++GL K R
Sbjct: 329 ---------TYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 379
Query: 396 REAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAH 454
EA + +DG P Y I++ C +F + L + + + ++ T
Sbjct: 380 DEALSLFNQMKADGL--SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 455 TTMLHLKNK--------------TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVH 500
+L L K + GE D +YN++I + +S + +A ++ ++
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGET-LDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 501 YGHAPHMFSVLALI 514
G P + + +LI
Sbjct: 497 TGITPSVATFNSLI 510
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%)
Query: 43 GEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE 102
G ++ + RE + +Q L M+ +G+ D+ TY+++I + C + + A L
Sbjct: 586 GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645
Query: 103 MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 162
M ++ S TYN L+ + C + KA + ++ E+ +S +Y +I C
Sbjct: 646 MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705
Query: 163 XXXXXXXXXXXVDKGIFPDAATYSSLMEALC 193
+ +G YS+++ LC
Sbjct: 706 PEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 166/339 (48%), Gaps = 22/339 (6%)
Query: 60 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 119
EA +++ M +G + TY V+ C ID A LL++M A +VV Y++++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 120 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 179
+ C+ D A+ + M +G+ P+V +Y+ +IS C +++ I
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
P+ T+++L++A E +L EA L+ EM++ + PD TY+ L+N C+ +A H+
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 240 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYS 299
+ MI K P+ +VTYN LI+G C R++E +E+ R M + GL N V+Y+
Sbjct: 388 FELMISKDCFPN--------VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 300 TVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGN 359
T+I GF Q + D A + D + ++ TY+++++ G
Sbjct: 440 TLIHGFFQARDC-----------DNAQMVFKQMVSDGVHPNIM---TYNTLLDGLCKNGK 485
Query: 360 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
+++A+ + + R + Y+++I G+ K + +
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 211/477 (44%), Gaps = 60/477 (12%)
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
E M+ G+ + TY+ +I FC ++I A LL +M+ G+ PS+VT +SL+ YC
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
+ AV ++ M E G PD ++ +I V +G P+ TY
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 186 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
++ LC + AF+L +M + + + Y+ ++++ C A +L EM +
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 246 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
KG P+ ++TY++LI LC +R +A +L M E ++PN V+++ +I F
Sbjct: 289 KGVRPN--------VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 306 CQIGELGKAYELKIETEDKAIWWLDED--TYDSLMDSLSYED------------------ 345
+ G+L +A +L E ++I D D TY SL++ D
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSI---DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 346 ----TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRD 401
TY++++N + + ++L +MS+ G + + V Y+ LI+G + A+
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 402 LLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHL 460
+ SDG P+ Y+ LL+ C N + + + +V +Y R S T +T
Sbjct: 458 FKQMVSDGV--HPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQR--SKMEPTIYT----- 507
Query: 461 KNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
YN++I C++ V ++++ + G P + +IS
Sbjct: 508 --------------YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 140/266 (52%), Gaps = 8/266 (3%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ +A + M+ KG+ + TYSS+I CN + A LLS+MI + +P+
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VVT+N+L+ A+ + + +A + M +R + PD+ +Y+ +I+ FC
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ K FP+ TY++L+ C +R+ E +LFREM + G+ + +TYT L++ G
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH-----G 444
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
F + +M+ K + D G P I+TYN L+ GLC ++E+A+ + + +
Sbjct: 445 FFQARDCDNAQMVFKQMVSD---GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 292 SPNAVSYSTVISGFCQIGELGKAYEL 317
P +Y+ +I G C+ G++ ++L
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDL 527
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 157/360 (43%), Gaps = 22/360 (6%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ G I A +L M+ + + YS+VI C D A L +EM KG P+
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V+TY+SL+ C + A +L M ER ++P+V ++N +I F
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ + I PD TYSSL+ C+ RL EA +F M+ P+ +TY L+N C
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ L EM +G + + VTY LIHG + A + + M G+
Sbjct: 415 RIDEGVELFREMSQRGLVGN--------TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
PN ++Y+T++ G C+ G+L KA + E S M+ Y TY+ ++
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKA------------MVVFEYLQRSKMEPTIY--TYNIMI 512
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
G ++ L +S G + Y+ +I+G +K EA + DG L
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPL 572
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
+EG++ EAE++ + M + + D TYSS+I FC +++D A + MI+K P+VV
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
TYN+L+ +C+ +D+ V + R M++RGL + +Y +I F
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
V G+ P+ TY++L++ LC +L +A +F + R + P TY ++ C G+
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
+ L + KG PD ++ YN +I G C EEA + R M E G P
Sbjct: 522 EDGWDLFCSLSLKGVKPD--------VIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Query: 294 NA 295
++
Sbjct: 574 DS 575
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 168/413 (40%), Gaps = 70/413 (16%)
Query: 105 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX 164
+ FS Y ++ +D A+G+ M + P + +N+++S
Sbjct: 43 GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102
Query: 165 XXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLL 224
GI + TY+ L+ C ++S A L +M++ G P +T + LL
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 225 NACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 284
N C + A L D+M+ G+ PD +T+ LIHGL ++ EA+ ++
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPD--------TITFTTLIHGLFLHNKASEAVALVD 214
Query: 285 GMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL-------KIET---------------- 321
M + G PN V+Y V++G C+ G++ A+ L KIE
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYR 274
Query: 322 -EDKAIWWLDE----------DTYDSLMDSL-SYED---------------------TYS 348
ED A+ E TY SL+ L +YE T++
Sbjct: 275 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFN 334
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL-LYIAS 407
++++ ++ EG + A +L +M + YS LING R EAK L I+
Sbjct: 335 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 394
Query: 408 DGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH 459
D F P+ Y+ L+ C VEL ++ S R L + T +TT++H
Sbjct: 395 DCF---PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT-YTTLIH 443
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 17 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLD 76
NV YN +I GF C+ RI E ++ M +GL +
Sbjct: 399 NVVTYNTLINGF------------------------CKAKRIDEGVELFREMSQRGLVGN 434
Query: 77 ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 136
TY+++I F D+A + +M++ G P+++TYN+L+ C+ ++KA+ +
Sbjct: 435 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 494
Query: 137 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 196
+ + P + +YN +I C KG+ PD Y++++ C +
Sbjct: 495 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Query: 197 RLSEAFDLFREMLRGGVSPDELT 219
EA LFR+M G PD T
Sbjct: 555 LKEEADALFRKMREDGPLPDSGT 577
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 174/390 (44%), Gaps = 33/390 (8%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
+C + A L M G D T++S++ +C+ N+I+ A L +++ GF P+
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VVTY +L+ C+ ++ AV + M G P+V +YN +++ C
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ + I P+ T+++L++A +L EA +L+ M++ V PD TY L+N C+ G
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+A + M G P+ V Y LIHG C RVE+ ++I M + G+
Sbjct: 308 LLDEARQMFYLMERNGCYPN--------EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED------ 345
N ++Y+ +I G+C +G A E+ + + D TY+ L+D L
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA-PPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 346 ----------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 389
TY+ ++ G ++ A L + G + + Y+ +I+G
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Query: 390 HKKARTREAKRDLLYIASDGFLSMPSYTVY 419
++ EA + DGFL P+ +VY
Sbjct: 479 CRRGLIHEADSLFKKMKEDGFL--PNESVY 506
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 155/335 (46%), Gaps = 22/335 (6%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
++ LC+ + A ++ M G + TY++++ C + + A LL +M+ +
Sbjct: 195 IRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI 254
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P+V+T+ +L+ A+ + + +A + M + + PDV +Y +I+ C
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
G +P+ Y++L+ C +R+ + +F EM + GV + +TYT L+ C
Sbjct: 315 MFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
LVG A + ++M + PD I TYN L+ GLC +VE+AL I M +
Sbjct: 375 LVGRPDVAQEVFNQMSSRRAPPD--------IRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
+ N V+Y+ +I G C++G++ A++L K + + TY+
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG---MKPNVI-----------TYT 472
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 383
++++ + G + A L M DG+L + Y
Sbjct: 473 TMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 160/384 (41%), Gaps = 61/384 (15%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
GI P T + +M +C+ + A +M++ G PD +T+T LLN C A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 237 FHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYNALIHG 269
L D+++ GF P+ VT G P +VTYNAL+ G
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 270 LCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWL 329
LC + R +A +LR M + + PN ++++ +I F ++G+L +A EL
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL------------ 280
Query: 330 DEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 387
Y+ ++ Y D TY S++N G + A Q+ + M R+G + V Y+ LI+
Sbjct: 281 ----YNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIH 336
Query: 388 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDL 446
G K R + + ++ G ++ + Y +L++ C E+ S R
Sbjct: 337 GFCKSKRVEDGMKIFYEMSQKGVVA--NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394
Query: 447 SDDAATAHTTM--LHLKNKTDG-----------ENKTDGGMYNLLIFEHCRSHNVHKAYN 493
D T + + L K + E + Y ++I C+ V A++
Sbjct: 395 PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFD 454
Query: 494 MYMEMVHYGHAPHMFSVLALISAL 517
++ + G P++ + +IS
Sbjct: 455 LFCSLFSKGMKPNVITYTTMISGF 478
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 212/478 (44%), Gaps = 50/478 (10%)
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
G+ ++ T S ++ C KI+ A +L +AKG P+ V YN+++ YCR+ + A
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Query: 132 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 191
+ AM ++G+ PD +YN +I +FC KG+ P TY+ L+
Sbjct: 409 RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGG 468
Query: 192 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 251
+ + FD+ +EM G P+ ++Y L+N C K L + I K + D
Sbjct: 469 YGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLC------KGSKLLEAQIVKRDMED 522
Query: 252 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGEL 311
G SP + YN LI G C ++E+A + M + G+ N V+Y+T+I G G+L
Sbjct: 523 --RGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 312 GKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMS 371
+A +L +E K L D + TY+S+++ Y GN+QR + L +M
Sbjct: 581 SEAEDLLLEISRKG---LKPDVF-----------TYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 372 RDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM-PSYTVYDILLENC--SN 428
R G + Y +LI+ K+ E L G +S+ P VY+ +L +C +
Sbjct: 627 RSGIKPTLKTYHLLISLCTKEG--IELTERLF-----GEMSLKPDLLVYNGVL-HCYAVH 678
Query: 429 SEFKSLVELVKDYSMRDLSDDAATAHTTML-HLK--------------NKTDGENKTDGG 473
+ + L K + + D T ++ +L LK N + E + D
Sbjct: 679 GDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEAD-- 736
Query: 474 MYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVIN 531
YN+++ HC + AY Y EM G + L+S L ++ E VI+
Sbjct: 737 TYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVIS 794
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 163/369 (44%), Gaps = 27/369 (7%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L LC+EG+I +AE++L KGL +E Y+++I +C + A + M +G
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P + YN L+ +C ++ A + M +G+SP V++YN +I +
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
D G P+ +Y +L+ LC +L EA + R+M GVSP Y L++ CC
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G+ AF EM+ K G +VTYN LI GL ++ EA ++L +
Sbjct: 541 SKGKIEDAFRFSKEMLKK--------GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED--- 345
GL P+ +Y+++ISG+ G + + L E + I + TY L+ + E
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLK-TYHLLISLCTKEGIEL 651
Query: 346 ---------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 390
Y+ V++ Y G+M++A L M Y+ LI G
Sbjct: 652 TERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQL 711
Query: 391 KKARTREAK 399
K + E +
Sbjct: 712 KVGKLCEVR 720
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 190/417 (45%), Gaps = 48/417 (11%)
Query: 17 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLK-----------RLCREGRIPEAEQML 65
N IYN MI G+ + K Q +K R C G + AE+ +
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
MK KG+ TY+ +IG + + D +L EM G P+VV+Y +L+ C+
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKG 507
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
+ +A + R M +RG+SP V YN +I C + KGI + TY
Sbjct: 508 SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567
Query: 186 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
++L++ L + +LSEA DL E+ R G+ PD TY L++ G + L++EM
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 246 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL-RGMPEMGLSPNAVSYSTVISG 304
+G P + TY+ LI LC +E +E+ R EM L P+ + Y+ V+
Sbjct: 628 --------SGIKPTLKTYHLLI-SLC----TKEGIELTERLFGEMSLKPDLLVYNGVLHC 674
Query: 305 FCQIGELGKAYELKIETEDKAIWWLDEDTYDSL-------------------MDSLSYE- 344
+ G++ KA+ L+ + +K+I LD+ TY+SL M++ E
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSI-GLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEP 733
Query: 345 --DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 399
DTY+ ++ + + A +M G+L + L++GL ++ R++EA+
Sbjct: 734 EADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAE 790
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 113/487 (23%), Positives = 212/487 (43%), Gaps = 55/487 (11%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ R+ +AEQ+ + M + L TY+++I +C + + + M A PS
Sbjct: 224 LCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPS 283
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
++T+N+L+ + V+ A +L+ M + G PD +++ + +
Sbjct: 284 LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE 343
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLF-REMLRGGVSPDELTYTRLLNACCLV 230
VD G+ +A T S L+ ALC E ++ +A ++ REM +G V P+E+ Y +++ C
Sbjct: 344 TAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV-PNEVIYNTMIDGYCRK 402
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTY 263
G+ A + M +G PD + G SP++ TY
Sbjct: 403 GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 264 NALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETED 323
N LI G ++ +IL+ M + G PN VSY T+I+ C+ +L +A +K + ED
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED 522
Query: 324 KAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 383
+ + Y+ +++ ++G ++ A + +M + G + V Y+
Sbjct: 523 RGVS--------------PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYN 568
Query: 384 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCS-NSEFKSLVELVKDYS 442
LI+GL + EA+ LL I+ G P Y+ L+ + + L ++
Sbjct: 569 TLIDGLSMTGKLSEAEDLLLEISRKGL--KPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 443 MRDLSDDAATAHTTM-------LHLKNKTDGEN--KTDGGMYNLLIFEHCRSHNVHKAYN 493
+ T H + + L + GE K D +YN ++ + ++ KA+N
Sbjct: 627 RSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFN 686
Query: 494 MYMEMVH 500
+ +M+
Sbjct: 687 LQKQMIE 693
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 223/508 (43%), Gaps = 53/508 (10%)
Query: 43 GEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE 102
G+A Q+ +L G+ ++ MK ++ Y+ +I C +++ A L E
Sbjct: 183 GKAIQAAVKLSDVGK---GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDE 239
Query: 103 MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 162
M+A+ PS++TYN+L+ YC+ + +K+ + M + P + ++N ++
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 163 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 222
D G PDA T+S L + ++ A ++ + GV + T +
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 223 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 282
LLNA C G+ KA + + KG +P+ V YN +I G C + A
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNE--------VIYNTMIDGYCRKGDLVGARMK 411
Query: 283 LRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS 342
+ M + G+ P+ ++Y+ +I FC++GE+ A + + + K + S S
Sbjct: 412 IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV-------------SPS 458
Query: 343 YEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA---K 399
E TY+ ++ Y + + + +M +G + + V+Y LIN L K ++ EA K
Sbjct: 459 VE-TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 400 RDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM- 457
RD+ D +S P +Y++L++ CS + + K+ + + + T +T +
Sbjct: 518 RDM----EDRGVS-PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 458 -LHLKNK-TDGEN----------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 505
L + K ++ E+ K D YN LI + + NV + +Y EM G P
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Query: 506 HMFSVLALISALDD------DRMYNEMS 527
+ + LIS +R++ EMS
Sbjct: 633 TLKTYHLLISLCTKEGIELTERLFGEMS 660
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/505 (20%), Positives = 193/505 (38%), Gaps = 88/505 (17%)
Query: 44 EAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 103
E ++L+ L ++ RI A +L + L D ++S F SA +L S
Sbjct: 57 EKLRNLRVLLQQNRIETARGVLSSL----LRSDSTPFASPKELF-------SAFSLSSPS 105
Query: 104 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 163
+ FS Y L + +A + A+ G+ P DS ++
Sbjct: 106 LKHDFS-----YLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQF 160
Query: 164 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 223
++ P Y ++A + + +LF M + P Y L
Sbjct: 161 RVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVL 220
Query: 224 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVT------GF--------------------- 256
++ C A L DEM+ + LP +T G+
Sbjct: 221 IDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHI 280
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
P+++T+N L+ GL VE+A +L+ M ++G P+A ++S + G+
Sbjct: 281 EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY----------- 329
Query: 317 LKIETEDKAIWWLDEDTYDSLMDSLSYEDTY--SSVMNDYLAEGNMQRALQ-LDHDMSRD 373
+ +KA L Y++ +DS + Y S ++N EG +++A + L +M++
Sbjct: 330 ---SSNEKAEAAL--GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK- 383
Query: 374 GYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFK 432
G + + V Y+ +I+G +K A+ + + G P + Y+ L+ C E +
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM--KPDHLAYNCLIRRFCELGEME 441
Query: 433 SLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAY 492
+ + V ++ +S T YN+LI + R + K +
Sbjct: 442 NAEKEVNKMKLKGVSPSVET----------------------YNILIGGYGRKYEFDKCF 479
Query: 493 NMYMEMVHYGHAPHMFSVLALISAL 517
++ EM G P++ S LI+ L
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCL 504
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 137/266 (51%), Gaps = 12/266 (4%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC EGR+ +A +++ M +G + Y ++I C + +SA LLS+M
Sbjct: 20 LCCEGRVLQALALVDRMVEEG----HQPYGTIINGLCKMGDTESALNLLSKMEETHIKAH 75
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VV YN+++ C+ A + M ++G+ PDV +Y+ +I FC
Sbjct: 76 VVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLR 135
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+++ I PD T+S+L+ AL E ++SEA +++ +MLR G+ P +TY +++ C
Sbjct: 136 DMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQD 195
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
A + D M K PD +VT++ LI+G C RV+ +EI M G+
Sbjct: 196 RLNDAKRMLDSMASKSCSPD--------VVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 247
Query: 292 SPNAVSYSTVISGFCQIGELGKAYEL 317
N V+Y+T+I GFCQ+G+L A +L
Sbjct: 248 VANTVTYTTLIHGFCQVGDLDAAQDL 273
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 156/327 (47%), Gaps = 26/327 (7%)
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
G D T+++++ C ++ A L+ M+ +G P Y +++ C+ + A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 132 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 191
+ +L M E + V YN +I + C DKGIFPD TYS ++++
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 192 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 251
C R ++A L R+M+ ++PD +T++ L+NA G+ ++A ++ +M+ +G P
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFP- 179
Query: 252 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGEL 311
+TYN++I G C DR+ +A +L M SP+ V++ST+I+G+C+ +
Sbjct: 180 -------TTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRV 232
Query: 312 GKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMS 371
E+ E + I ++ TY+++++ + G++ A L + M
Sbjct: 233 DNGMEIFCEMHRRGI--------------VANTVTYTTLIHGFCQVGDLDAAQDLLNVMI 278
Query: 372 RDGYLSSYVAYSVLINGLHKKARTREA 398
G +Y+ + ++ L K R+A
Sbjct: 279 SSGVAPNYITFQSMLASLCSKKELRKA 305
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 116/240 (48%), Gaps = 8/240 (3%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+ RLC++G A+ + M KG+F D TYS +I FC + A LL +MI +
Sbjct: 83 IDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI 142
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
+P VVT+++L+ A + V +A I M RG+ P +YN +I FC
Sbjct: 143 NPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKR 202
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
K PD T+S+L+ C +R+ ++F EM R G+ + +TYT L++ C
Sbjct: 203 MLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 262
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
VG+ A L + MI G P++ +T+ +++ LC + +A IL + +
Sbjct: 263 QVGDLDAAQDLLNVMISSGVAPNY--------ITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 157/341 (46%), Gaps = 33/341 (9%)
Query: 103 MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 162
M+ G P VVT+ +L+ C V +A+ ++ M E G P Y +I+ C
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 163 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 222
+ I Y+++++ LC + A +LF EM G+ PD +TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 223 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 282
++++ C G +T A L +MI + PD +VT++ALI+ L +V EA EI
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPD--------VVTFSALINALVKEGKVSEAEEI 168
Query: 283 LRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS 342
M G+ P ++Y+++I GFC+ L A + DS+
Sbjct: 169 YGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRM----------------LDSMASKSC 212
Query: 343 YED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKR 400
D T+S+++N Y + +++ +M R G +++ V Y+ LI+G + +A +
Sbjct: 213 SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL-DAAQ 271
Query: 401 DLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKD 440
DLL + ++ P+Y + +L + CS E + +++D
Sbjct: 272 DLLNVMISSGVA-PNYITFQSMLASLCSKKELRKAFAILED 311
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 147/345 (42%), Gaps = 51/345 (14%)
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
V+ G PD T+++LM LC E R+ +A L M+ G P Y ++N C +G+
Sbjct: 2 VETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDT 57
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
A +L +M T +V YNA+I LC A + M + G+ P
Sbjct: 58 ESALNLLSKMEE--------THIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFP 109
Query: 294 NAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMND 353
+ ++YS +I FC+ G A +L + ++ I + D T+S+++N
Sbjct: 110 DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI---NPDVV-----------TFSALINA 155
Query: 354 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM 413
+ EG + A ++ DM R G + + Y+ +I+G K+ R +AKR L +AS
Sbjct: 156 LVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS--CS 213
Query: 414 PSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDG 472
P + L+ C + +E+ + R + + T
Sbjct: 214 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT-------------------- 253
Query: 473 GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
Y LI C+ ++ A ++ M+ G AP+ + +++++L
Sbjct: 254 --YTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 148/294 (50%), Gaps = 9/294 (3%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
CR+G + A + + + KGL TY ++I C + ++ +A L++EM +KG + +
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
V +N+L+ YCR+ VD+A I M ++G DV + N + S F
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
++ G+ +Y++L++ C E + EA LF EM GV P+ +TY ++ A C G+
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
+A L M G PD T Y +LIHG C D V+EA+ + M GL
Sbjct: 520 IKEARKLRANMEANGMDPDSYT--------YTSLIHGECIADNVDEAMRLFSEMGLKGLD 571
Query: 293 PNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDT 346
N+V+Y+ +ISG + G+ +A+ L E + K + +D Y +L+ S+ +T
Sbjct: 572 QNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG-YTIDNKVYTALIGSMHSPET 624
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 163/374 (43%), Gaps = 41/374 (10%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LCR G + +++++++ KG+ + TY+++I + +L M G +
Sbjct: 234 LCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYN 293
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VTY L+ + + A + M ERG+ DV Y +IS C
Sbjct: 294 KVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFD 353
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+KG+ P + TY +L++ +C + A L EM GV+ ++ + L++ C G
Sbjct: 354 ELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKG 413
Query: 232 EFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYN 264
+A ++D M KGF D T G + V+Y
Sbjct: 414 MVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYT 473
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
LI C VEEA + M G+ PNA++Y+ +I +C+ G++ +A +L+ E
Sbjct: 474 NLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEAN 533
Query: 325 AIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 384
+D D+Y TY+S+++ N+ A++L +M G + V Y+V
Sbjct: 534 G---MDPDSY-----------TYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 385 LINGLHKKARTREA 398
+I+GL K ++ EA
Sbjct: 580 MISGLSKAGKSDEA 593
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 198/442 (44%), Gaps = 32/442 (7%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
G E ++ + M KGL +DER+ + +ID + M+ G +V +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
+V CRR V+K+ +++ + +G+ P+ +YN +I+ +
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
G+ + TY+ LME ++S+A LF EM G+ D YT L++ C G +
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 236 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
AF L DE+ K G SP+ TY ALI G+C + + A ++ M G++
Sbjct: 348 AFLLFDELTEK--------GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 296 VSYSTVISGFCQIGELGKAYELKIETEDKAIWW--LDEDTYDSLMDSLSYED-------- 345
V ++T+I G+C+ G + +A + E K +T S + L D
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459
Query: 346 -----------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR 394
+Y+++++ Y EGN++ A +L +MS G + + Y+V+I K+ +
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 395 TREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAH 454
+EA++ + ++G + SYT ++ C + L + ++ L ++ T +
Sbjct: 520 IKEARKLRANMEANG-MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT-Y 577
Query: 455 TTMLHLKNKTDGENKTDGGMYN 476
T M+ +K G++ G+Y+
Sbjct: 578 TVMISGLSKA-GKSDEAFGLYD 598
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 149/337 (44%), Gaps = 22/337 (6%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
+ G++ +AE++ + M+ +G+ D Y+S+I W C + A L E+ KG SPS
Sbjct: 306 KNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY 365
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
TY +L+ C+ + A ++ M +G++ +N +I +C
Sbjct: 366 TYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVM 425
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
KG D T +++ +R EA M+ GGV ++YT L++ C G
Sbjct: 426 EQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNV 485
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
+A L EM KG P+ +TYN +I+ C +++EA ++ M G+ P
Sbjct: 486 EEAKRLFVEMSSKGVQPN--------AITYNVMIYAYCKQGKIKEARKLRANMEANGMDP 537
Query: 294 NAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMND 353
++ +Y+++I G C + +A L E + LD+++ TY+ +++
Sbjct: 538 DSYTYTSLIHGECIADNVDEAMRLFSEM---GLKGLDQNSV-----------TYTVMISG 583
Query: 354 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 390
G A L +M R GY Y+ LI +H
Sbjct: 584 LSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMH 620
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 172/413 (41%), Gaps = 47/413 (11%)
Query: 103 MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 162
M+ KG S + + A +R +D + I R M + G+ V S V+ C
Sbjct: 180 MVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGE 239
Query: 163 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 222
KGI P+A TY++++ A ++ S + + M + GV +++TYT
Sbjct: 240 VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTL 299
Query: 223 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 282
L+ G+ + A L DEM +G D + Y +LI C ++ A +
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIESD--------VHVYTSLISWNCRKGNMKRAFLL 351
Query: 283 LRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS 342
+ E GLSP++ +Y +I G C++GE+G A L E + K + + + +++L+D
Sbjct: 352 FDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN-ITQVVFNTLIDG-- 408
Query: 343 YEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL 402
Y +G + A + M + G+ + + + + ++ R EAK+ L
Sbjct: 409 -----------YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWL 457
Query: 403 LYIASDGF-LSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLK 461
+ G LS SYT +++ C + L + S + + +A T
Sbjct: 458 FRMMEGGVKLSTVSYT--NLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAIT--------- 506
Query: 462 NKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 514
YN++I+ +C+ + +A + M G P ++ +LI
Sbjct: 507 -------------YNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 146/358 (40%), Gaps = 40/358 (11%)
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
V KG+ D + + A +R+ ++FR M+ GV + T ++ C GE
Sbjct: 181 VKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEV 240
Query: 234 TKAFHLHDEMIHKGFLPDF-VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
K+ K + +F V G P TYN +I+ +L+ M + G+
Sbjct: 241 EKS---------KKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVV 291
Query: 293 PNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMN 352
N V+Y+ ++ + G++ A +L E ++ I + D + Y+S+++
Sbjct: 292 YNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGI---ESDVH-----------VYTSLIS 337
Query: 353 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 412
+GNM+RA L +++ G S Y LI+G+ K A+ + + S G
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV-- 395
Query: 413 MPSYTVYDILLENCSNSEFKSLVELVKDY-SMRDLSDDAATAHTT---MLHLKNKTDGEN 468
+ V++ L++ ++ D + D T +T LK + +
Sbjct: 396 NITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQ 455
Query: 469 ----KTDGGM------YNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA 516
+GG+ Y LI +C+ NV +A +++EM G P+ + +I A
Sbjct: 456 WLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYA 513
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 188/421 (44%), Gaps = 76/421 (18%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVI-GW------------------------ 86
LCR+ ++ EAE+M E+MK G+ + TYS++I G+
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303
Query: 87 ----------FCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 136
FC ++ +A +L M+ G P++ YN L+ +C+ ++ +AVG+L
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 137 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 196
M LSPDV +Y +I+ C ++ IFP +ATY+SL+ C E
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 256
+ +A DL EM GV P+ +T++ L++ C V + A L+ EM KG +PD
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD----- 478
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
+VTY ALI ++EAL + M E G+ PN +++ ++ GF + G L A +
Sbjct: 479 ---VVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535
Query: 317 LKIETEDKAIWWLDEDTYDSLMDSLS-----------YED-----------TYSSVMNDY 354
E + W + + L++ L + D +Y S++ +
Sbjct: 536 FYQENNQQRSCW-NHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGH 594
Query: 355 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMP 414
L E + + L DM + G L ++L+N L AR +A Y+ S FL+
Sbjct: 595 LQEKRITDTMMLQCDMIKTGILP-----NLLVNQL--LARFYQANG---YVKSACFLTNS 644
Query: 415 S 415
S
Sbjct: 645 S 645
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 161/341 (47%), Gaps = 22/341 (6%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
++G + E++L+ M G+ + Y+ I C NK++ A + M G P++
Sbjct: 211 KQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLY 270
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
TY++++ YC+ +V +A G+ + + L P+V + ++ FC
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHM 330
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
V G+ P+ Y+ L+ C + EA L EM +SPD TYT L+N C+ +
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
+A L +M ++ P+ TYN+LIHG C +E+AL++ M G+ P
Sbjct: 391 AEANRLFQKMKNERIF--------PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 294 NAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMND 353
N +++ST+I G+C + ++ A L E K I D TY +L+D+
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP-DVVTYTALIDA------------- 488
Query: 354 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR 394
+ E NM+ AL+L DM G + ++ L++G K+ R
Sbjct: 489 HFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 143/333 (42%), Gaps = 25/333 (7%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
G EA + MKC D + S++ + DS MI++G P V Y
Sbjct: 146 GLFEEALWVSREMKCSP---DSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIY 202
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
L ++ K +L M G+ P+V Y I C
Sbjct: 203 FVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKK 262
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
G+ P+ TYS++++ C + +A+ L++E+L + P+ + + L++ C E
Sbjct: 263 HGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVT 322
Query: 236 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
A L M+ G P + YN LIHG C + EA+ +L M + LSP+
Sbjct: 323 ARSLFVHMVK--------FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDV 374
Query: 296 VSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYL 355
+Y+ +I+G C ++ +A L + +++ I+ TY+S+++ Y
Sbjct: 375 FTYTILINGLCIEDQVAEANRLFQKMKNERIF--------------PSSATYNSLIHGYC 420
Query: 356 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 388
E NM++AL L +M+ G + + +S LI+G
Sbjct: 421 KEYNMEQALDLCSEMTASGVEPNIITFSTLIDG 453
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 137/303 (45%), Gaps = 21/303 (6%)
Query: 5 RASFTAALKMALNVN--IYNGMIRGFATAAGK-------SDSESKKVGEAFQS----LKR 51
R+ F +K ++ N +YN +I G + S+ ES + + +
Sbjct: 324 RSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING 383
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC E ++ EA ++ + MK + +F TY+S+I +C ++ A L SEM A G P+
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPN 443
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
++T+++L+ YC + A+G+ M +G+ PDV +Y +I
Sbjct: 444 IITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYS 503
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
++ GI P+ T++ L++ E RLS A D ++E + + + +T L+ C G
Sbjct: 504 DMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNG 563
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+A +M G PD I +Y +++ G R+ + + + M + G+
Sbjct: 564 YILRASRFFSDMRSCGITPD--------ICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615
Query: 292 SPN 294
PN
Sbjct: 616 LPN 618
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 138/365 (37%), Gaps = 66/365 (18%)
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
PD+ S++ L +R + ++ M+ G+ PD Y L C G ++K L
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 240 HDEMIHKGFLPDFVT---------------------------GFSPAIVTYNALIHGLCF 272
DEM G P+ G P + TY+A+I G C
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 273 LDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDED 332
V +A + + + L PN V + T++ GFC+ EL A L + + +D +
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHM---VKFGVDPN 338
Query: 333 TYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKK 392
Y Y+ +++ + GNM A+ L +M Y++LINGL +
Sbjct: 339 LY-----------VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIE 387
Query: 393 ARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAA 451
+ EA R + ++ PS Y+ L+ C + ++L + + + +
Sbjct: 388 DQVAEANRLFQKMKNERIF--PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNII 445
Query: 452 TAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 511
T ++ LI +C ++ A +Y EM G P + +
Sbjct: 446 T----------------------FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 512 ALISA 516
ALI A
Sbjct: 484 ALIDA 488
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 155/355 (43%), Gaps = 36/355 (10%)
Query: 77 ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRD-SVDKAVGIL 135
++ Y +V+ N+++ A M G P+V + N L+ A CR D +VD + I
Sbjct: 121 QKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIF 180
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 195
M +RG PD +Y +IS C V+K P TY+SL+ LC
Sbjct: 181 LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGS 240
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
+ + EA EM G+ P+ TY+ L++ C G +A L + M+ +G P+
Sbjct: 241 KNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN---- 296
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
+VTY LI GLC +++EA+E+L M GL P+A Y VISGFC I + +A
Sbjct: 297 ----MVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAA 352
Query: 316 ELKIE------TEDKAIWWLDEDTYDSLMDSLSYE---------------------DTYS 348
E T ++ W + T + ++ L +T
Sbjct: 353 NFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLE 412
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 403
S++ +G Q+A+QL ++ DG + S + +LI K EA LL
Sbjct: 413 SLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLL 467
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 8/206 (3%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC + EA + LE MK KG+ + TYSS++ C + A L M+A+G P+
Sbjct: 237 LCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+VTY +L+ C+ + +AV +L M +GL PD Y +VIS FC
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLD 356
Query: 172 XXVDKGIFPDAATY-------SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLL 224
+ GI P+ T+ + ++ LC S AF L+ M G+S + T L+
Sbjct: 357 EMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLESLV 415
Query: 225 NACCLVGEFTKAFHLHDEMIHKGFLP 250
C GEF KA L DE++ G +P
Sbjct: 416 KCLCKKGEFQKAVQLVDEIVTDGCIP 441
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 133/344 (38%), Gaps = 41/344 (11%)
Query: 258 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQI-GELGKAYE 316
P+ Y ++ L +++ A + + M E+GL P S + +I C+ G + +
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLK 178
Query: 317 LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 376
+ +E + D D+Y TY ++++ G + A +L +M
Sbjct: 179 IFLEMPKRGC---DPDSY-----------TYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 377 SSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLV 435
+ V Y+ LINGL EA R L + S G P+ Y L++ C + +
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGI--EPNVFTYSSLMDGLCKDGRSLQAM 282
Query: 436 ELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN-------------KTDGGMYNLLIFEH 482
EL + R + T T + L + + K D G+Y +I
Sbjct: 283 ELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGF 342
Query: 483 CRSHNVHKAYNMYMEMVHYGHAP-------HMFSVLALISALDDDRMYNEMSWVINNTLR 535
C +A N EM+ G P H+ + ++ L + Y ++ + ++R
Sbjct: 343 CAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN--YPSRAFTLYLSMR 400
Query: 536 SCNLS-DSEQLKVLSEINVTKSEIYALLDVLAEMAMDSLLLDGG 578
S +S + E L+ L + K E + ++ E+ D + G
Sbjct: 401 SRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKG 444
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 126/505 (24%), Positives = 226/505 (44%), Gaps = 47/505 (9%)
Query: 45 AFQSLKRLCREGRI-PEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 103
+ +L C+ G + EA Q+ E MK G D+ TY++++ + ++ A +L+EM
Sbjct: 281 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 104 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 163
+ GFSPS+VTYNSL+ AY R +D+A+ + MAE+G PDV +Y ++S F
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 164 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 223
+ G P+ T+++ ++ + +E +F E+ G+SPD +T+ L
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 224 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 283
L G ++ + EM GF+P+ T+N LI E+A+ +
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPE--------RETFNTLISAYSRCGSFEQAMTVY 512
Query: 284 RGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSY 343
R M + G++P+ +Y+TV++ + G ++ ++ E ED
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC--------------KPN 558
Query: 344 EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL----HKKARTREAK 399
E TY S+++ Y A G + + L H ++ + Y +VL+ L K EA+
Sbjct: 559 ELTYCSLLHAY-ANG---KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAE 614
Query: 400 RDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDY-SMRDLSDDAATAHTTM- 457
R + GF P T + ++ + + V DY R + AT ++ M
Sbjct: 615 RAFSELKERGF--SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 458 LHLKNKTDGEN------------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 505
+H ++ G++ K D YN +I+ +CR+ + A ++ EM + G P
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 506 HMFSVLALISALDDDRMYNEMSWVI 530
+ + I + D M+ E V+
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVV 757
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 17/278 (6%)
Query: 49 LKRLCREGRIPEAEQMLEVM---KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIA 105
L L R G ++E++L M +CK +E TY S++ + N +I H+L E+ +
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGRCKP---NELTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Query: 106 KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 165
P V +LV + D + +A + ERG SPD+ + N ++S +
Sbjct: 588 GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAK 647
Query: 166 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
++G P ATY+SLM ++ ++ RE+L G+ PD ++Y ++
Sbjct: 648 ANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIY 707
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 285
A C A + EM + G +PD ++TYN I EEA+ ++R
Sbjct: 708 AYCRNTRMRDASRIFSEMRNSGIVPD--------VITYNTFIGSYAADSMFEEAIGVVRY 759
Query: 286 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETED 323
M + G PN +Y++++ G+C+ L + E K+ ED
Sbjct: 760 MIKHGCRPNQNTYNSIVDGYCK---LNRKDEAKLFVED 794
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 9/241 (3%)
Query: 75 LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 134
LD + +I ++ SA + + + GFS V +Y SL+ A+ +AV +
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 135 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK-GIFPDAATYSSLMEALC 193
+ M E G P + +YN +++ F + GI PDA TY++L+
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK 290
Query: 194 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 253
EA +F EM G S D++TY LL+ +A + +EM+ +
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV--------L 342
Query: 254 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGK 313
GFSP+IVTYN+LI ++EA+E+ M E G P+ +Y+T++SGF + G++
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVES 402
Query: 314 A 314
A
Sbjct: 403 A 403
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R + +A +L+ MK +G TY+S++ + +L E++AKG P ++
Sbjct: 641 RRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDII 700
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
+YN++++AYCR + A I M G+ PDV +YN I +
Sbjct: 701 SYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLR 210
+ G P+ TY+S+++ C R EA LF E LR
Sbjct: 761 IKHGCRPNQNTYNSIVDGYCKLNRKDEA-KLFVEDLR 796
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 127/526 (24%), Positives = 224/526 (42%), Gaps = 61/526 (11%)
Query: 14 MALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCK-G 72
++LNV +N ++ G+ C EG++ +A MLE M +
Sbjct: 200 VSLNVQTFNVLVNGY------------------------CLEGKLEDALGMLERMVSEFK 235
Query: 73 LFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAV 132
+ D TY++++ ++ LL +M G P+ VTYN+LV+ YC+ S+ +A
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 133 GILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEAL 192
I+ M + + PD+ +YN +I+ C + PD TY++L++
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG- 354
Query: 193 CVEQRLS-EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 251
C E LS EA L +M GV +++T+ L C + E++
Sbjct: 355 CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVD------ 408
Query: 252 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGEL 311
+ GFSP IVTY+ LI + + ALE++R M + G+ N ++ +T++ C+ +L
Sbjct: 409 -MHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKL 467
Query: 312 GKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMS 371
+A+ L + + K + +DE TY +L+ + E +++AL++ +M
Sbjct: 468 DEAHNL-LNSAHKRGFIVDEVTYGTLIMG-------------FFREEKVEKALEMWDEMK 513
Query: 372 RDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEF 431
+ + ++ LI GL +T A +A G L S T I+L C
Sbjct: 514 KVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDS-TFNSIILGYCKEGRV 572
Query: 432 KSLVELVKDYSMRDLSDDAATAHTTM------------LHLKNKTDGENKTDGGMYNLLI 479
+ E + D T + + L+ N E + D YN +I
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMI 632
Query: 480 FEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 525
C+ + +AY++ EM G P F+ + IS L +D +E
Sbjct: 633 SAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSE 678
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 133/269 (49%), Gaps = 9/269 (3%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K + G + A +M+ M KG+ ++ T ++++ C K+D AH LL+ +GF
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
VTY +L+ + R + V+KA+ + M + ++P V ++N +I C
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAME 542
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ G+ PD +T++S++ C E R+ +AF+ + E ++ PD T LLN C
Sbjct: 543 KFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G KA + + +I + + VTYN +I C +++EA ++L M E
Sbjct: 603 KEGMTEKALNFFNTLIEEREV---------DTVTYNTMISAFCKDKKLKEAYDLLSEMEE 653
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYEL 317
GL P+ +Y++ IS + G+L + EL
Sbjct: 654 KGLEPDRFTYNSFISLLMEDGKLSETDEL 682
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 194/434 (44%), Gaps = 35/434 (8%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K +C EG++ +++E KG + Y+++IG +C L I++A+ + E+ KGF
Sbjct: 212 VKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGF 271
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P++ T+ +++ +C+ + +L + ERGL V N +I
Sbjct: 272 MPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAE 331
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ PD ATY+ L+ LC E + A E + G+ P+ L+Y L+ A C
Sbjct: 332 SIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYC 391
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
E+ A L +M +G PD IVTY LIHGL +++A+ + + +
Sbjct: 392 KSKEYDIASKLLLQMAERGCKPD--------IVTYGILIHGLVVSGHMDDAVNMKVKLID 443
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMD--------- 339
G+SP+A Y+ ++SG C+ G A L E D+ I D Y +L+D
Sbjct: 444 RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNI-LPDAYVYATLIDGFIRSGDFD 502
Query: 340 ------SLSYEDT-------YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 386
SLS E +++++ + G + AL + M+ + + YS +I
Sbjct: 503 EARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562
Query: 387 NGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRD 445
+G K+ A + Y+ + P+ Y L+ C +FK E K+ +RD
Sbjct: 563 DGYVKQQDMATAIKIFRYMEKNK--CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRD 620
Query: 446 LSDDAATAHTTMLH 459
L + T +TT++
Sbjct: 621 LVPNVVT-YTTLIR 633
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 131/543 (24%), Positives = 231/543 (42%), Gaps = 74/543 (13%)
Query: 17 NVNIYNGMIRGFATAAGKSDS-----ESKKVG-----EAFQSL-KRLCREGRIPEAEQML 65
N+ YN +I G+ ++ E K G E F ++ C+EG ++++L
Sbjct: 239 NIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLL 298
Query: 66 EVMKCKGLFLDERTYSSVI-GWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 124
+K +GL + +++I + + K+D A ++ +IA P V TYN L+ C+
Sbjct: 299 SEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI-GWIIANDCKPDVATYNILINRLCK 357
Query: 125 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 184
+ AVG L +++GL P+ SY +I +C ++G PD T
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVT 417
Query: 185 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 244
Y L+ L V + +A ++ +++ GVSPD Y L++ C G F A L EM+
Sbjct: 418 YGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEML 477
Query: 245 HKGFLPD------FVTGFSPA---------------------IVTYNALIHGLCFLDRVE 277
+ LPD + GF + +V +NA+I G C ++
Sbjct: 478 DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLD 537
Query: 278 EALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSL 337
EAL + M E L P+ +YST+I G+ + ++ A K +++++
Sbjct: 538 EALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI--------KIFRYMEKNKCKPN 589
Query: 338 MDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTRE 397
+ TY+S++N + +G+ + A + +M + + V Y+ LI L K++ T E
Sbjct: 590 V------VTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE 643
Query: 398 AKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAH--- 454
+ + Y L M + V + + NC F VK S + L++ + H
Sbjct: 644 --KAVYYWE----LMMTNKCVPNEVTFNCLLQGF------VKKTSGKVLAEPDGSNHGQS 691
Query: 455 ---TTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 511
+ H + K+DG + YN + C V A +MV G +P S
Sbjct: 692 SLFSEFFH-RMKSDGWS-DHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFA 749
Query: 512 ALI 514
A++
Sbjct: 750 AIL 752
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 118/300 (39%), Gaps = 42/300 (14%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ GR A+ + M + + D Y+++I F D A + S + KG
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VV +N+++ +CR +D+A+ + M E L PD +Y+ +I +
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLL------- 224
P+ TY+SL+ C + A + F+EM + P+ +TYT L+
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639
Query: 225 ---------------NAC--------CLVGEFTK------------AFHLHDEMIHKGFL 249
N C CL+ F K + H + + F
Sbjct: 640 STLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFH 699
Query: 250 PDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG 309
G+S YN+ + LC V+ A M + G SP+ VS++ ++ GFC +G
Sbjct: 700 RMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVG 759
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 143/359 (39%), Gaps = 52/359 (14%)
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
PD +SL+ L +RL +A ++ EM G S D + L+ C G+ L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 240 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYS 299
+ KG +P+ IV YN +I G C L +E A + + + G P ++
Sbjct: 228 IEGRWGKGCIPN--------IVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFG 279
Query: 300 TVISGFCQIGELGKAYELKIETEDK----AIWWLDE------------DTYDSL-----M 338
T+I+GFC+ G+ + L E +++ ++W+L+ D +S+
Sbjct: 280 TMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAN 339
Query: 339 DSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
D TY+ ++N EG + A+ + S+ G + + ++Y+ LI K A
Sbjct: 340 DCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIA 399
Query: 399 KRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTML 458
+ LL +A G P Y IL+ LV M DDA ++
Sbjct: 400 SKLLLQMAERG--CKPDIVTYGILIHG-----------LVVSGHM----DDAVNMKVKLI 442
Query: 459 HLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
D D +YN+L+ C++ A ++ EM+ P + LI
Sbjct: 443 ------DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 178/386 (46%), Gaps = 32/386 (8%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
GR+ EA M+ M+ +GL T + V+ L I+ A + EM +G P +Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
+V R + +A L M +RG PD + +++ C +D
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
G P+ ++SL++ LC + + +AF++ EM+R G P+ T+T L++ C G K
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340
Query: 236 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
AF L +++ + P + TY ++I G C D++ A + M E GL PN
Sbjct: 341 AFRLFLKLVRSD-------TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNV 393
Query: 296 VSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL--------SYE--- 344
+Y+T+I+G C+ G G+AYEL D+ + + TY++ +DSL +YE
Sbjct: 394 NTYTTLINGHCKAGSFGRAYELMNLMGDEG-FMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Query: 345 -----------DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 393
TY+ ++ + + ++ +AL M++ G+ + ++LI ++
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 512
Query: 394 RTREAKRDLLYIASDGFLSMPSYTVY 419
+ +E++R + S G + P+ Y
Sbjct: 513 KMKESERLFQLVVSLGLI--PTKETY 536
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 135/294 (45%), Gaps = 9/294 (3%)
Query: 34 KSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKI 93
+SD+ V + C+E ++ AE + MK +GLF + TY+++I C
Sbjct: 350 RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF 409
Query: 94 DSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRV 153
A+ L++ M +GF P++ TYN+ + + C++ +A +L GL D +Y +
Sbjct: 410 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL 469
Query: 154 ISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV 213
I + C G D + L+ A C ++++ E+ LF+ ++ G+
Sbjct: 470 IQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529
Query: 214 SPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFL 273
P + TYT +++ C G+ A M G +PD TY +LI GLC
Sbjct: 530 IPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD--------SFTYGSLISGLCKK 581
Query: 274 DRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIW 327
V+EA ++ M + GLSP V+ T+ +C+ + A L +E DK +W
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL-LEPLDKKLW 634
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 174/405 (42%), Gaps = 41/405 (10%)
Query: 128 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 187
+++AVG++ M +GL+P + N V+ +G+ PD+++Y
Sbjct: 163 LNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKL 222
Query: 188 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 247
++ + ++ EA M++ G PD T T +L A C G +A +MI
Sbjct: 223 MVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID-- 280
Query: 248 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQ 307
GF P ++ + +LI GLC +++A E+L M G PN +++ +I G C+
Sbjct: 281 ------LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 334
Query: 308 IGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLD 367
G KA+ L ++ + DTY + TY+S++ Y E + RA L
Sbjct: 335 RGWTEKAFRLFLKL-------VRSDTYKPNVH------TYTSMIGGYCKEDKLNRAEMLF 381
Query: 368 HDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD-GFLSMPSYTVYDILLEN- 425
M G + Y+ LING H KA + +L+ + D GF MP+ Y+ +++
Sbjct: 382 SRMKEQGLFPNVNTYTTLING-HCKAGSFGRAYELMNLMGDEGF--MPNIYTYNAAIDSL 438
Query: 426 CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT--------------D 471
C S EL+ L D T +T ++ + K + N+ D
Sbjct: 439 CKKSRAPEAYELLNKAFSCGLEADGVT-YTILIQEQCKQNDINQALAFFCRMNKTGFEAD 497
Query: 472 GGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA 516
+ N+LI CR + ++ ++ +V G P + ++IS
Sbjct: 498 MRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISC 542
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 165/378 (43%), Gaps = 56/378 (14%)
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 256
RL+EA + +M G++P +T +L +G A ++ DEM +G +PD
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD----- 216
Query: 257 SPAIVTYNALIHGLCFLD-RVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
+Y ++ G CF D +++EA L GM + G P+ + + +++ C+ G +
Sbjct: 217 ---SSSYKLMVIG-CFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV---- 268
Query: 316 ELKIETEDKAIWWLDEDTYDSLMDSLSYEDT---YSSVMNDYLAEGNMQRALQLDHDMSR 372
++AIW+ + M L ++ ++S+++ +G++++A ++ +M R
Sbjct: 269 -------NRAIWYFRK------MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 315
Query: 373 DGYLSSYVAYSVLINGLHKKARTREAKRDLL-YIASDGFLSMPSYTVYDILLENCSNSEF 431
+G+ + ++ LI+GL K+ T +A R L + SD + P+ Y
Sbjct: 316 NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTY--KPNVHTY------------ 361
Query: 432 KSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKA 491
++ Y D + A ML + K G + Y LI HC++ + +A
Sbjct: 362 ---TSMIGGYCKEDKLNRAE-----MLFSRMKEQGLFP-NVNTYTTLINGHCKAGSFGRA 412
Query: 492 YNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNL-SDSEQLKVLSE 550
Y + M G P++++ A I +L E ++N SC L +D +L +
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF-SCGLEADGVTYTILIQ 471
Query: 551 INVTKSEIYALLDVLAEM 568
+++I L M
Sbjct: 472 EQCKQNDINQALAFFCRM 489
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 3/176 (1%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
CR+ ++ E+E++ +++ GL + TY+S+I +C ID A M G P
Sbjct: 508 FCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD 567
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
TY SL+ C++ VD+A + AM +RGLSP + + ++C
Sbjct: 568 SFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE 627
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
+DK ++ T +L+ LC E+++ A F+++L S D +T AC
Sbjct: 628 P-LDKKLW--IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTAC 680
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 205/472 (43%), Gaps = 48/472 (10%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L L E RI + MK G + TY+ ++ C NK+D A LL EM KG
Sbjct: 153 LDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGC 212
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P V+Y +++ + C V + R +AER P V YN +I+ C
Sbjct: 213 CPDAVSYTTVISSMCEVGLVKEG----RELAER-FEPVVSVYNALINGLCKEHDYKGAFE 267
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
V+KGI P+ +YS+L+ LC ++ AF +ML+ G P+ T + L+ C
Sbjct: 268 LMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCF 327
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
L G A L ++MI +GF G P +V YN L+ G C + +A+ + M E
Sbjct: 328 LRGTTFDALDLWNQMI-RGF------GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE 380
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED--T 346
+G SPN +Y ++I+GF + G L D A++ ++ ++ S +
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSL-----------DGAVY-----IWNKMLTSGCCPNVVV 424
Query: 347 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 406
Y++++ + A L MS++ S ++ I GL R A++ +
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 484
Query: 407 SDGFLSMPSYTVYDILLENCSNS-EFKSLVELVKDYSMRDLSDDAATAHTTM-------- 457
P+ Y+ LL+ + + + L ++ MR + ++T +T +
Sbjct: 485 QQHRCP-PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGL 543
Query: 458 ----LHLKNK--TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGH 503
L L K DG++ + M N++I +C+ +A M +++V G
Sbjct: 544 PGIALQLVGKMMVDGKSPDEITM-NMIILAYCKQGKAERAAQM-LDLVSCGR 593
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 206/494 (41%), Gaps = 55/494 (11%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
LK LC+ ++ A+++L M KG D +Y++VI C + + L A+ F
Sbjct: 188 LKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERF 242
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P V YN+L+ C+ A ++R M E+G+SP+V SY+ +I+ C
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG-GVSPDELTYTRLLNAC 227
+ +G P+ T SSL++ + +A DL+ +M+RG G+ P+ + Y L+
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
C G KA + M G SP I TY +LI+G ++ A+ I M
Sbjct: 363 CSHGNIVKAVSVFSHMEE--------IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKML 414
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 347
G PN V Y+ ++ C+ + +A L IE K E+ S+ T+
Sbjct: 415 TSGCCPNVVVYTNMVEALCRHSKFKEAESL-IEIMSK------ENCAPSV-------PTF 460
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDGYL-SSYVAYSVLINGLHKKARTREA---KRDLL 403
++ + G + A ++ M + + V Y+ L++GL K R EA R++
Sbjct: 461 NAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIF 520
Query: 404 YIASDGFLSMPSYTVYDILLENCSNSEFKSL-VELVKDYSMRDLSDDAATAHTTMLHLKN 462
+ S + Y+ LL N+ + ++LV + S D T + +L
Sbjct: 521 MRGVEW-----SSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 463 KTDGEN---------------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM 507
+ E + D Y +I+ CRS+ + M+ G P +
Sbjct: 576 QGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSI 635
Query: 508 --FSVLALISALDD 519
+SVL LDD
Sbjct: 636 ATWSVLINCFILDD 649
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 184/430 (42%), Gaps = 43/430 (10%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDER-TYSSVIGWFCNLNKIDSAHTLLSEMIAKG 107
+KRL +E +P A + + LF T+ +I ++DS LL +M +G
Sbjct: 47 VKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQG 106
Query: 108 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
F S + S++ Y + ++AV + + E G P V YN V+
Sbjct: 107 FHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIY 166
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
G P+ TY+ L++ALC ++ A L EM G PD ++YT ++++
Sbjct: 167 MVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSM 226
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
C VG + L + F P + YNALI+GLC + A E++R M
Sbjct: 227 CEVGLVKEGRELAER-------------FEPVVSVYNALINGLCKEHDYKGAFELMREMV 273
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKA----IWWLDE------------ 331
E G+SPN +SYST+I+ C G++ A+ + + I+ L
Sbjct: 274 EKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTF 333
Query: 332 ---DTYDSLMDSLSYEDT---YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 385
D ++ ++ + Y++++ + + GN+ +A+ + M G + Y L
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 386 INGLHKKARTREAKRDLLYIASDGFLS--MPSYTVYDILLEN-CSNSEFKSLVELVKDYS 442
ING K+ A +YI + S P+ VY ++E C +S+FK L++ S
Sbjct: 394 INGFAKRGSLDGA----VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 443 MRDLSDDAAT 452
+ + T
Sbjct: 450 KENCAPSVPT 459
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 120/299 (40%), Gaps = 40/299 (13%)
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
G P++ YN ++ L +R++ + R M G PN +Y+ ++ C+ ++ A
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 200
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLS--------------YE---DTYSSVMNDYLAE 357
+L +E +K D +Y +++ S+ +E Y++++N E
Sbjct: 201 KKLLVEMSNKGC-CPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKE 259
Query: 358 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 417
+ + A +L +M G + ++YS LIN L + A ++
Sbjct: 260 HDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELA-----------------FS 302
Query: 418 VYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNL 477
+L+ + +L LVK +R + DA M+ + + YN
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR-----GFGLQPNVVAYNT 357
Query: 478 LIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRS 536
L+ C N+ KA +++ M G +P++ + +LI+ + ++ N L S
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 188/399 (47%), Gaps = 39/399 (9%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K LC G I +A + + M +G + TY+ +I C KI+ A+ + +M+
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
PSV+TYN+L+ YC+ V A +L M +R P+V ++N ++ C
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+D G+ PD +Y+ L++ LC E ++ A+ L M + PD LT+T ++NA C
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G+ A M+ KG D VTG LI G+C + + +AL IL + +
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTG--------TTLIDGVCKVGKTRDALFILETLVK 539
Query: 289 MGLSPNAVSYSTV---ISGFCQIGE----LGKAYELKIETEDKAIWWLDEDTYDSLMDSL 341
M + S + + +S C++ E LGK +L L+ S+
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKL------------------GLVPSV 581
Query: 342 SYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRD 401
TY+++++ + G++ + ++ M G L + Y+++INGL + R EA++
Sbjct: 582 V---TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK- 637
Query: 402 LLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVK 439
LL D +S P++ Y ++++ +N + +E V+
Sbjct: 638 LLSAMQDSGVS-PNHVTYTVMVKGYVNNGKLDRALETVR 675
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 189/435 (43%), Gaps = 41/435 (9%)
Query: 19 NIYNGMIR-GFATAAGKSDSESKKVGEAFQS------LKRLCREGRIPEAEQMLEVM-KC 70
I N + + G+ AA S+ K+G S L CR + +A ++ +VM K
Sbjct: 200 TIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKE 259
Query: 71 KGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDK 130
+ +YS +I C + +++ A L +M KG PS TY L+ A C R +DK
Sbjct: 260 VTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDK 319
Query: 131 AVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLME 190
A + M RG P+V +Y +I C V IFP TY++L+
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 191 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 250
C + R+ AF+L M + P+ T+ L+ C VG+ KA HL M+ G P
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 251 DFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGE 310
D IV+YN LI GLC + A ++L M + P+ ++++ +I+ FC+ G+
Sbjct: 440 D--------IVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491
Query: 311 LGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS---------------------S 349
A K I LDE T +L+D + +
Sbjct: 492 ADVASAFLGLMLRKGI-SLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLN 550
Query: 350 VMNDYLAEG-NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD 408
V+ D L++G ++ L + +++ G + S V Y+ L++GL + + R L +
Sbjct: 551 VILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLS 610
Query: 409 GFLSMPSYTVYDILL 423
G L P+ Y I++
Sbjct: 611 GCL--PNVYPYTIII 623
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 173/384 (45%), Gaps = 29/384 (7%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFC---NLNKIDSAHTLLSEMIAKGF 108
LC+ G AE + + G LD +S++ FC NL ++S+ +
Sbjct: 205 LCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVT--C 262
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
+P+ V+Y+ L+ C +++A G+ M E+G P +Y +I C
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ +G P+ TY+ L++ LC + ++ EA + R+M++ + P +TY L+N C
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G AF L M + P+ T +N L+ GLC + + +A+ +L+ M +
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRT--------FNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
GLSP+ VSY+ +I G C+ G + AY+L + +D D L T++
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKL----------LSSMNCFDIEPDCL----TFT 480
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD 408
+++N + +G A M R G V + LI+G+ K +TR+A L +
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540
Query: 409 GFLSMPSY--TVYDILLENCSNSE 430
L+ P + D+L + C E
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKE 564
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 200/458 (43%), Gaps = 78/458 (17%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LCR+G+I EA + M +F TY+++I +C ++ A LL+ M + P+
Sbjct: 346 LCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V T+N L+ CR KAV +L+ M + GLSPD+ SYN +I C
Sbjct: 406 VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLS 465
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
I PD T+++++ A C + + A MLR G+S DE+T T L++ C VG
Sbjct: 466 SMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVG 525
Query: 232 E-----------------------------FTKAFHLHDEM-----IHK-GFLPDFVT-- 254
+ +K + +E+ I+K G +P VT
Sbjct: 526 KTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYT 585
Query: 255 -------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 289
G P + Y +I+GLC RVEEA ++L M +
Sbjct: 586 TLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDS 645
Query: 290 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL-----SYE 344
G+SPN V+Y+ ++ G+ G+L +A E ++ + L++ Y SL+ +
Sbjct: 646 GVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG-YELNDRIYSSLLQGFVLSQKGID 704
Query: 345 DTYSSVMNDY-LAEGNMQRALQLDHDMSR-DGYLSSYVAYSVLINGLHKKARTREAKRDL 402
++ S ++D L E + + +L + + G +S + L+ L K+ RT E+ +
Sbjct: 705 NSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDLV 762
Query: 403 LYIASDG-FLSMPSYTVYDILLEN-CSNSEFKSLVELV 438
+ G FL DI++E+ CS + +EL+
Sbjct: 763 QNVLERGVFLE----KAMDIIMESYCSKKKHTKCMELI 796
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 140/336 (41%), Gaps = 50/336 (14%)
Query: 185 YSSLMEALCVEQRLSEAFDLF-REMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
Y +++ ALC + +EA ++F ++L+ G D T LL F + +L D +
Sbjct: 198 YRTIVNALC-KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLG------FCRGLNLRDAL 250
Query: 244 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVIS 303
+ VT +P V+Y+ LIHGLC + R+EEA + M E G P+ +Y+ +I
Sbjct: 251 KVFDVMSKEVT-CAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309
Query: 304 GFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQ 361
C G + KA+ L +D ++ + TY+ +++ +G ++
Sbjct: 310 ALCDRGLIDKAFNL----------------FDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Query: 362 RALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDI 421
A + M +D S + Y+ LING K R +P++ + +
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRV-----------------VPAFELLTV 396
Query: 422 LLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFE 481
+ + ++ EL++ + + LK D D YN+LI
Sbjct: 397 MEKRACKPNVRTFNELMEGLC------RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 482 HCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
CR +++ AY + M + P + A+I+A
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/529 (23%), Positives = 230/529 (43%), Gaps = 66/529 (12%)
Query: 18 VNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLC-REGRIPEAEQMLEVMKCKGLFLD 76
+++ +G+IR + D F SL R C + G A +++E + +G +
Sbjct: 131 LHVLSGLIRSYQACGSSPD--------VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVS 182
Query: 77 ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 136
++ +G N+N+ID + EM + G+ +V T+N +++++C+ + +A+ +
Sbjct: 183 VHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFY 242
Query: 137 AMAERGLSPDVDSYNRVISKFCXXX-XXXXXXXXXXXXVDKGIF--PDAATYSSLMEALC 193
M + G+ P+V S+N +I C + G F P+A TY+S++ C
Sbjct: 243 RMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFC 302
Query: 194 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 253
RL A + +M++ GV +E TY L++A G +A L DEM KG + +
Sbjct: 303 KAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVN-- 360
Query: 254 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGK 313
V YN++++ L +E A+ +LR M + + + + V+ G C+ G + +
Sbjct: 361 ------TVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKE 414
Query: 314 AYELKIE--------------------TEDKAIWWLDEDTYDSLMDSLSYED-TYSSVMN 352
A E + + DK + D+ L+ LS + ++ ++++
Sbjct: 415 AVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLID 474
Query: 353 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 412
YL EG ++RAL++ M + S+ V Y+ ++NGL K+ A+ A +
Sbjct: 475 GYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAE------AVVNAME 528
Query: 413 MPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDG 472
+ Y+ LL E +K ++ + D +L K DGE
Sbjct: 529 IKDIVTYNTLLN-----------ESLKTGNVEEADD--------ILSKMQKQDGEKSVSL 569
Query: 473 GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDR 521
+N++I C+ + KA + MV G P + LI++ R
Sbjct: 570 VTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHR 618
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 145/338 (42%), Gaps = 38/338 (11%)
Query: 17 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQS------------LKRLCREGRIPEAEQM 64
N YN +I GF A G+ D + G+ +S + R G EA ++
Sbjct: 290 NAVTYNSVINGFCKA-GRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRL 348
Query: 65 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 124
+ M KGL ++ Y+S++ W I+ A ++L +M +K T +V CR
Sbjct: 349 CDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCR 408
Query: 125 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 184
V +AV R ++E+ L D+ +N ++ F + +G+ DA +
Sbjct: 409 NGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAIS 468
Query: 185 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG------EFTKAFH 238
+ +L++ E +L A +++ M++ + + + Y ++N G A
Sbjct: 469 FGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME 528
Query: 239 LHDEMIHKGFLPD-FVTGF------------------SPAIVTYNALIHGLCFLDRVEEA 279
+ D + + L + TG S ++VT+N +I+ LC E+A
Sbjct: 529 IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKA 588
Query: 280 LEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
E+L+ M E G+ P++++Y T+I+ F + K EL
Sbjct: 589 KEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVEL 626
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 6/199 (3%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R+ ++ A+Q+L M +GL LD ++ ++I + K++ A + MI + ++V
Sbjct: 443 RDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLV 502
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX--XXXXX 171
YNS+V +R A ++ AM + D+ +YN ++++
Sbjct: 503 IYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKM 558
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
D T++ ++ LC +A ++ + M+ GV PD +TY L+ +
Sbjct: 559 QKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHR 618
Query: 232 EFTKAFHLHDEMIHKGFLP 250
K LHD +I +G P
Sbjct: 619 SQEKVVELHDYLILQGVTP 637
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 144/310 (46%), Gaps = 47/310 (15%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
G + EA + E M+ KG+F Y+++I ++ L+ E+ A+G +P+V TY
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
+L+ +C +DKA M E+G++ +V+ +++ + VD
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD 674
Query: 176 --------------------------------------KGIFPDAATYSSLMEALCVEQR 197
K + P+ Y+ + LC +
Sbjct: 675 FDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGK 734
Query: 198 LSEAFDLFREMLRGG-VSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 256
L +A LF ++L PDE TYT L++ C + G+ KAF L DEM KG +P+
Sbjct: 735 LEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPN----- 789
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
IVTYNALI GLC L V+ A +L +P+ G++PNA++Y+T+I G + G + +A
Sbjct: 790 ---IVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMR 846
Query: 317 LKIETEDKAI 326
LK + +K +
Sbjct: 847 LKEKMIEKGL 856
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 134/558 (24%), Positives = 235/558 (42%), Gaps = 60/558 (10%)
Query: 10 AALKMALNVNIYNGMIRGFA--------TAAGKSDSE---SKKVGEAFQSLKRLCREGRI 58
++L + LNV YN +I G+A T + SE S+ V +K C++G +
Sbjct: 253 SSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLM 312
Query: 59 PEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSL 118
EAE + E++K K L D+ Y ++ +C +I A + MI G + NSL
Sbjct: 313 EEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSL 372
Query: 119 VFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGI 178
+ YC+ + +A I M + L PD +YN ++ +C K +
Sbjct: 373 INGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEV 432
Query: 179 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 238
P TY+ L++ + L++ ML+ GV+ DE++ + LL A +G+F +A
Sbjct: 433 VPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMK 492
Query: 239 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSY 298
L + ++ +G L D +T N +I GLC +++V EA EIL + P +Y
Sbjct: 493 LWENVLARGLLTD--------TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTY 544
Query: 299 STVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMD-SLSYED------------ 345
+ G+ ++G L +A+ +K E K I+ E Y++L+ + Y
Sbjct: 545 QALSHGYYKVGNLKEAFAVKEYMERKGIFPTIE-MYNTLISGAFKYRHLNKVADLVIELR 603
Query: 346 ---------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTR 396
TY +++ + G + +A +M G + S + N L + +
Sbjct: 604 ARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKID 663
Query: 397 EAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKS--LVELVKDYSMRDL---SDDAA 451
EA LL D L +P Y LE + + K+ + E V++ + + L ++
Sbjct: 664 EACL-LLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVY 722
Query: 452 TAHTTMLHLKNKTDGENK------------TDGGMYNLLIFEHCRSHNVHKAYNMYMEMV 499
L K + K D Y +LI + +++KA+ + EM
Sbjct: 723 NVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMA 782
Query: 500 HYGHAPHMFSVLALISAL 517
G P++ + ALI L
Sbjct: 783 LKGIIPNIVTYNALIKGL 800
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 168/401 (41%), Gaps = 38/401 (9%)
Query: 53 CREGRIPEAEQML-EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
CR G + +A E GL L+ TY+S+I + + ++ +L M +G S +
Sbjct: 236 CRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRN 295
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VVTY SL+ YC++ +++A + + E+ L D Y ++ +C
Sbjct: 296 VVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHD 355
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
++ G+ + +SL+ C +L EA +F M + PD TY L++ C G
Sbjct: 356 NMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAG 415
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+A L D+M K + P ++TYN L+ G + + L + + M + G+
Sbjct: 416 YVDEALKLCDQMCQKEVV--------PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGV 467
Query: 292 SPNAVSYSTVISGFCQIGELGKAYEL------------------------KIETEDKAIW 327
+ + +S ST++ ++G+ +A +L K+E ++A
Sbjct: 468 NADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKE 527
Query: 328 WLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 387
LD ++ TY ++ + Y GN++ A + M R G + Y+ LI+
Sbjct: 528 ILDNVNIFRCKPAVQ---TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLIS 584
Query: 388 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSN 428
G K + ++ + + G P+ Y L+ N
Sbjct: 585 GAFKYRHLNKVADLVIELRARGL--TPTVATYGALITGWCN 623
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 189/438 (43%), Gaps = 55/438 (12%)
Query: 102 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM-AERGLSPDVDSYNRVISKFCXX 160
+MI+ SP V T + +V AYCR +VDKA+ + + GL +V +YN +I+ +
Sbjct: 215 QMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMI 274
Query: 161 XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTY 220
++G+ + TY+SL++ C + + EA +F + + D+ Y
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY 334
Query: 221 TRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEAL 280
L++ C G+ A +HD MI G N+LI+G C ++ EA
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIE--------IGVRTNTTICNSLINGYCKSGQLVEAE 386
Query: 281 EILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDS 340
+I M + L P+ +Y+T++ G+C+ G + +A +L + K + TY+ L+
Sbjct: 387 QIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVP-TVMTYNILLKG 445
Query: 341 LSY----------------------EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 378
S E + S+++ G+ A++L ++ G L+
Sbjct: 446 YSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTD 505
Query: 379 YVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELV 438
+ +V+I+GL K + EAK L + + F P+ Y L S+ +K + L
Sbjct: 506 TITLNVMISGLCKMEKVNEAKEILDNV--NIFRCKPAVQTYQAL----SHGYYK-VGNLK 558
Query: 439 KDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 498
+ +++++ + T MYN LI + +++K ++ +E+
Sbjct: 559 EAFAVKEYMERKGIFPTI----------------EMYNTLISGAFKYRHLNKVADLVIEL 602
Query: 499 VHYGHAPHMFSVLALISA 516
G P + + ALI+
Sbjct: 603 RARGLTPTVATYGALITG 620
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 161/374 (43%), Gaps = 27/374 (7%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L+ L + G EA ++ E + +GL D T + +I C + K++ A +L +
Sbjct: 478 LEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 537
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P+V TY +L Y + ++ +A + M +G+ P ++ YN +IS
Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVAD 597
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+G+ P ATY +L+ C + +A+ EM+ G++ + +++ N+
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLF 657
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
+ + +A L +++ L + G+ A ++ E++E P+
Sbjct: 658 RLDKIDEACLLLQKIVDFDLL---LPGYQSLKEFLEASATTCLKTQKIAESVE--NSTPK 712
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYD------------- 335
L PN + Y+ I+G C+ G+L A +L + + DE TY
Sbjct: 713 KLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDIN 772
Query: 336 ---SLMDSLSYED------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 386
+L D ++ + TY++++ GN+ RA +L H + + G + + Y+ LI
Sbjct: 773 KAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Query: 387 NGLHKKARTREAKR 400
+GL K EA R
Sbjct: 833 DGLVKSGNVAEAMR 846
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 147/350 (42%), Gaps = 48/350 (13%)
Query: 201 AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAI 260
A ++ +M+ VSPD T + ++NA C G KA E + G +
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKE-------TESSLGLELNV 261
Query: 261 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA-YELKI 319
VTYN+LI+G + VE +LR M E G+S N V+Y+++I G+C+ G + +A + ++
Sbjct: 262 VTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFEL 321
Query: 320 ETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 379
E K + D+ Y LMD Y G ++ A+++ +M G ++
Sbjct: 322 LKEKKLVA--DQHMYGVLMDG-------------YCRTGQIRDAVRVHDNMIEIGVRTNT 366
Query: 380 VAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELV 438
+ LING K + EA++ ++ + + P + Y+ L++ C ++L
Sbjct: 367 TICNSLINGYCKSGQLVEAEQ--IFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLC 424
Query: 439 KDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 498
+++ T YN+L+ + R H +++ M
Sbjct: 425 DQMCQKEVVPTVMT----------------------YNILLKGYSRIGAFHDVLSLWKMM 462
Query: 499 VHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVL 548
+ G S L+ AL +NE + N L L+D+ L V+
Sbjct: 463 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 69/172 (40%), Gaps = 36/172 (20%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKG-FSPSVVTYNSLVFAYCRRDSVDKAVGILRA 137
Y+ I C K++ A L S++++ F P TY L+ ++KA +
Sbjct: 721 VYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDE 780
Query: 138 MAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQR 197
MA KGI P+ TY++L++ LC
Sbjct: 781 MAL-----------------------------------KGIIPNIVTYNALIKGLCKLGN 805
Query: 198 LSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFL 249
+ A L ++ + G++P+ +TY L++ G +A L ++MI KG +
Sbjct: 806 VDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 177/375 (47%), Gaps = 39/375 (10%)
Query: 42 VGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLS 101
V + Q L LC+ R+ +A +++E+M G+ D Y+ ++ C + A L+
Sbjct: 106 VAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVE 165
Query: 102 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXX 161
+M G+ + VTYN+LV C S+++++ + + ++GL+P+ +Y+ ++
Sbjct: 166 KMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKER 225
Query: 162 XXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYT 221
+ KG P+ +Y+ L+ C E R +A LFRE+ G + ++Y
Sbjct: 226 GTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYN 285
Query: 222 RLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALE 281
LL C G + +A L EM +P++VTYN LI+ L F R E+AL+
Sbjct: 286 ILLRCLCCDGRWEEANSLLAEMDGG--------DRAPSVVTYNILINSLAFHGRTEQALQ 337
Query: 282 ILRGMPEMG--LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWL---DEDTYDS 336
+L+ M + A SY+ VI+ C+ G++ +L ++ D+ I+ +E TY++
Sbjct: 338 VLKEMSKGNHQFRVTATSYNPVIARLCKEGKV----DLVVKCLDEMIYRRCKPNEGTYNA 393
Query: 337 ----------------LMDSLSYE------DTYSSVMNDYLAEGNMQRALQLDHDMSRDG 374
++ SLS + D Y SV+ +GN A QL ++M+R G
Sbjct: 394 IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCG 453
Query: 375 YLSSYVAYSVLINGL 389
+ YS LI GL
Sbjct: 454 FDPDAHTYSALIRGL 468
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 182/432 (42%), Gaps = 59/432 (13%)
Query: 100 LSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCX 159
L ++ G P+V L++ C+ + + KA+ ++ M G+ PD +Y ++++ C
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 160 XXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELT 219
D G + TY++L+ LC+ L+++ +++ G++P+ T
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 220 YTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEA 279
Y+ LL A +A L DE+I V G P +V+YN L+ G C R ++A
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEII--------VKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 280 LEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETE--DKAIWWLDEDTYDSL 337
+ + R +P G N VSY+ ++ C G +A L E + D+A + TY+ L
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVV---TYNIL 322
Query: 338 MDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG--YLSSYVAYSVLINGLHKKART 395
++SL++ G ++ALQ+ +MS+ + + +Y+ +I L K
Sbjct: 323 INSLAF-------------HGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCK---- 365
Query: 396 REAKRDLLYIASDGFL---SMPSYTVYDILLENCS-NSEFKSLVELVKDYSMRDLSDDAA 451
E K DL+ D + P+ Y+ + C NS+ + +++ S +
Sbjct: 366 -EGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNK----QKC 420
Query: 452 TAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 511
H Y +I CR N A+ + EM G P +
Sbjct: 421 CTHD------------------FYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYS 462
Query: 512 ALISALDDDRMY 523
ALI L + M+
Sbjct: 463 ALIRGLCLEGMF 474
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 149/366 (40%), Gaps = 64/366 (17%)
Query: 195 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 254
E LS++F ++ GG P+ T+LL C KA + + M+ G +PD
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 143
Query: 255 ---------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
G+ VTYNAL+ GLC L + ++L+ + +
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 347
+ GL+PNA +YS ++ AY K D+A+ LDE +L +Y
Sbjct: 204 QKGLAPNAFTYSFLLEA---------AY--KERGTDEAVKLLDEIIVKGGEPNLV---SY 249
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 407
+ ++ + EG A+ L ++ G+ ++ V+Y++L+ L R EA + L
Sbjct: 250 NVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEA--NSLLAEM 307
Query: 408 DGFLSMPSYTVYDILLENCS-NSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDG 466
DG PS Y+IL+ + + + + ++++K+ S K +
Sbjct: 308 DGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMS--------------------KGNH 347
Query: 467 ENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEM 526
+ + YN +I C+ V EM++ P+ + A+ S + + E
Sbjct: 348 QFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEA 407
Query: 527 SWVINN 532
++I +
Sbjct: 408 FYIIQS 413
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 2/165 (1%)
Query: 46 FQSLKRLCREG-RIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI 104
+ ++ LC ++ EA +++ + K Y SVI C +A LL EM
Sbjct: 391 YNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMT 450
Query: 105 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAE-RGLSPDVDSYNRVISKFCXXXXX 163
GF P TY++L+ C A+ +L M E P VD++N +I C
Sbjct: 451 RCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRT 510
Query: 164 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 208
V+K P+ TY+ L+E + E L A ++ E+
Sbjct: 511 DLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 3/197 (1%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLN-KIDSAHTLLSEMIAKG 107
+ RLC+EG++ + L+ M + +E TY++ IG C N K+ A ++ + K
Sbjct: 360 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQ 418
Query: 108 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
+ Y S++ + CR+ + A +L M G PD +Y+ +I C
Sbjct: 419 KCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAM 478
Query: 168 XXXXXXVD-KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
+ + P +++++ LC +R A ++F M+ P+E TY L+
Sbjct: 479 EVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEG 538
Query: 227 CCLVGEFTKAFHLHDEM 243
E A + DE+
Sbjct: 539 IAHEDELELAKEVLDEL 555
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 174/404 (43%), Gaps = 43/404 (10%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K LC++GRI EA M + +G+ TYSS+I FC + S L +MI G+
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P VV Y LV ++ + A+ M + + +V +N +I +C
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
GI PD AT++++M +E RL EA LF M + G+ PD L Y L++A C
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Query: 229 LVGEFTKAFHLHDEM---------------IH-----------KGFLPDFVTG-FSPAIV 261
+ T L D M IH F + + G P IV
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 637
Query: 262 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIET 321
TYN +I G C L R++EA I + PN V+ + +I C+ ++ A +
Sbjct: 638 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 697
Query: 322 EDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 381
+K S TY +M+ + +++ + +L +M G S V+
Sbjct: 698 AEKG--------------SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVS 743
Query: 382 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN 425
YS++I+GL K+ R EA ++ + A D L +P Y IL+
Sbjct: 744 YSIIIDGLCKRGRVDEAT-NIFHQAIDAKL-LPDVVAYAILIRG 785
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 177/386 (45%), Gaps = 52/386 (13%)
Query: 51 RLCREGRIPEAEQ----MLEVMKCKG---------LFLDERTYSSVIGWFCN-------L 90
+LCR G P +L+ + CKG + ER + I CN +
Sbjct: 206 KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGI-VSCNKVLKGLSV 264
Query: 91 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSY 150
++I+ A LLS ++ G +P+VVT+ +L+ +C+R +D+A + + M +RG+ PD+ +Y
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 151 NRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLR 210
+ +I + + KG+ D +SS ++ L+ A +++ ML
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 211 GGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGL 270
G+SP+ +TYT L+ C G +AF ++ +++ + G P+IVTY++LI G
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR--------GMEPSIVTYSSLIDGF 436
Query: 271 CFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLD 330
C + + M +MG P+ V Y ++ G + G + A ++ ++I L+
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI-RLN 495
Query: 331 EDTYDSLMDS---LSYED-------------------TYSSVMNDYLAEGNMQRALQLDH 368
++SL+D L+ D T+++VM + EG ++ AL L
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFF 555
Query: 369 DMSRDGYLSSYVAYSVLINGLHKKAR 394
M + G +AY LI+ K +
Sbjct: 556 RMFKMGLEPDALAYCTLIDAFCKHMK 581
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/511 (21%), Positives = 211/511 (41%), Gaps = 52/511 (10%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C+ G + A + +VM+ +G+ D YS++I + + H L S+ + KG
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VV ++S + Y + + A + + M +G+SP+V +Y +I C
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ +G+ P TYSSL++ C L F L+ +M++ G PD + Y L++ G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
A +M+ + + +V +N+LI G C L+R +EAL++ R M G+
Sbjct: 476 LMLHAMRFSVKMLGQSIRLN--------VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 292 SPNAVSYSTVISGFCQIGELGKAYEL-----KIETEDKAIWWLDEDTYDSLMDSLSYEDT 346
P+ +++TV+ G L +A L K+ E A+
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL-------------------A 568
Query: 347 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 406
Y ++++ + LQL M R+ + +V+I+ L K R +A +
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK-FFNNL 627
Query: 407 SDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSD--DAATAHTTMLHL---K 461
+G + P Y+ ++ C + L E + + + ++ T ++H+
Sbjct: 628 IEGKME-PDIVTYNTMI--CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 684
Query: 462 NKTDGE-----------NKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 510
N DG +K + Y L+ +S ++ ++ ++ EM G +P + S
Sbjct: 685 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 744
Query: 511 LALISALDDDRMYNEMSWVINNTLRSCNLSD 541
+I L +E + + + + + L D
Sbjct: 745 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 775
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 123/289 (42%), Gaps = 27/289 (9%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
CR R EA ++ +M G+ D T+++V+ +++ A L M G P
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
+ Y +L+ A+C+ + + M +S D+ N VI
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
++ + PD TY++++ C +RL EA +F + P+ +T T L++ C +
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 233 FTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYNA 265
A + M KG P+ VT G SP+IV+Y+
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 266 LIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
+I GLC RV+EA I + L P+ V+Y+ +I G+C++G L +A
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 8/243 (3%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C+ + Q+ ++M+ + D + VI ++I+ A + +I P
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+VTYN+++ YC +D+A I + P+ + +I C
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 695
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+KG P+A TY LM+ + +F LF EM G+SP ++Y+ +++ C G
Sbjct: 696 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+A ++ + I LPD +V Y LI G C + R+ EA + M G+
Sbjct: 756 RVDEATNIFHQAIDAKLLPD--------VVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807
Query: 292 SPN 294
P+
Sbjct: 808 KPD 810
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C R+ EAE++ E++K + T + +I C N +D A + S M KG P+
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
VTY L+ + + ++ + + M E+G+SP + SY+ +I C
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 218
+D + PD Y+ L+ C RL EA L+ MLR GV PD+L
Sbjct: 767 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 179/435 (41%), Gaps = 86/435 (19%)
Query: 123 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 182
CR VDKA+ I + G+ + P
Sbjct: 157 CRYGMVDKALEIFVYSTQLGV----------------------------------VIPQD 182
Query: 183 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELT-YTRLLNACCLVGEFTKAFHLHD 241
+ Y ++ +L R+ D F ++ RGG+ P ++ + +L+A GE TKA H
Sbjct: 183 SVY-RMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHR 241
Query: 242 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTV 301
++ + GF IV+ N ++ GL +D++E A +L + + G +PN V++ T+
Sbjct: 242 LVMER--------GFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTL 292
Query: 302 ISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED---------------- 345
I+GFC+ GE+ +A++L E + I D Y +L+D
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEP-DLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 346 ------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 399
+SS ++ Y+ G++ A + M G + V Y++LI GL + R EA
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 400 RDLLYIASDGFLSMPSYTVYDILLE---NCSN--SEFKSLVELVK-----DYSMRDLSDD 449
I G PS Y L++ C N S F +++K D + + D
Sbjct: 412 GMYGQILKRGM--EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 450 AATAHTTMLH---LKNKTDGEN-KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 505
+ MLH K G++ + + ++N LI CR + +A ++ M YG P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 506 HM--FSVLALISALD 518
+ F+ + +S ++
Sbjct: 530 DVATFTTVMRVSIME 544
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 141/552 (25%), Positives = 222/552 (40%), Gaps = 105/552 (19%)
Query: 49 LKRLCREGRIPEAEQML--------------------EVMKCKGLFLD--ERTYSS---- 82
+K LCR+G + EA +L E K L L+ +R Y +
Sbjct: 223 VKALCRKGNLEEAAMLLIENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDL 282
Query: 83 ------VIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 136
V+ FCN K+ +A +++ EM GF V +++ YC+ ++ +A+G L
Sbjct: 283 RAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLD 342
Query: 137 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 196
M +GL + + ++ +C D IF D Y+ +AL
Sbjct: 343 KMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLG 402
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 256
R+ EAF+L +EM G+ PD + YT L++ CL G+ A L DEMI G PD
Sbjct: 403 RVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPD----- 457
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
++TYN L+ GL EE LEI M G PNAV+ S +I G C ++ +A +
Sbjct: 458 ---LITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAED 514
Query: 317 L--KIET---EDKAIW-------WLDEDTYDSLMDSLSY---EDTYSSVMNDYLAEGNMQ 361
+E E+KA + L + Y + + L Y + Y + EG ++
Sbjct: 515 FFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFV-RLEYPLRKSVYIKLFFSLCIEGYLE 573
Query: 362 RALQLDHDMSRDGYLSSYVAYSV---------LINGLHKKARTREAKRDLLYIASDGFLS 412
+A HD+ L AY V +I K REA+ + G +
Sbjct: 574 KA----HDV-----LKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLI- 623
Query: 413 MPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT- 470
P Y I++ C +E + L +D R + D T +T +L K D E+
Sbjct: 624 -PDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVT-YTVLLDRYLKLDPEHHET 681
Query: 471 --------------------------DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHA 504
D Y +LI C+ +N+ +A ++ M+ G
Sbjct: 682 CSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLE 741
Query: 505 PHMFSVLALISA 516
P M + LIS+
Sbjct: 742 PDMVAYTTLISS 753
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 163/389 (41%), Gaps = 64/389 (16%)
Query: 45 AFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI 104
AF +L +L GR+ EA ++L+ MK +G+ D Y+++I +C K+ A L+ EMI
Sbjct: 394 AFDALSKL---GRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 105 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX 164
G SP ++TYN LV R ++ + I M G P+ + + +I C
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 165 XXXXXXXXXVDK---------------GIFPDA-------------ATYSSLMEALCVEQ 196
K G+ A + Y L +LC+E
Sbjct: 511 EAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEG 570
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 256
L +A D+ ++M V P +++ A C + +A L D M+ +G +PD
Sbjct: 571 YLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPD----- 625
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQI-------- 308
+ TY +IH C L+ +++A + M + G+ P+ V+Y+ ++ + ++
Sbjct: 626 ---LFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETC 682
Query: 309 ---GELGKAYELKIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRAL 364
GE+GK ++ E A LD Y L+D MN N+++A
Sbjct: 683 SVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDR-------QCKMN------NLEQAA 729
Query: 365 QLDHDMSRDGYLSSYVAYSVLINGLHKKA 393
+L M G VAY+ LI+ +K
Sbjct: 730 ELFDRMIDSGLEPDMVAYTTLISSYFRKG 758
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC EG + +A +L+ M + +IG FC LN + A L M+ +G P
Sbjct: 566 LCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPD 625
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+ TY ++ YCR + + KA + M +RG+ PDV +Y ++ ++
Sbjct: 626 LFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQ 685
Query: 172 XXVDK-------------GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 218
V K GI D Y+ L++ C L +A +LF M+ G+ PD +
Sbjct: 686 GEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMV 745
Query: 219 TYTRLLN----------ACCLVGEFTKAFHLHDE 242
YT L++ A LV E +K +++ E
Sbjct: 746 AYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSE 779
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 131/325 (40%), Gaps = 57/325 (17%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM-------- 103
L R G E ++ E MK +G + T S +I C K+ A S +
Sbjct: 468 LARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENK 527
Query: 104 --IAKGFSPSVVT------------------YNSLVFAYCRRDSVDKAVGILRAMAERGL 143
KG+ + ++ Y L F+ C ++KA +L+ M+ +
Sbjct: 528 ASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRV 587
Query: 144 SPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFD 203
P ++I FC V++G+ PD TY+ ++ C L +A
Sbjct: 588 EPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAES 647
Query: 204 LFREMLRGGVSPDELTYTRLLN-----------ACCLVGEFTKAFHLHDEMIHKGFLPDF 252
LF +M + G+ PD +TYT LL+ C + GE K L +F
Sbjct: 648 LFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKR-------KASEVLREF 700
Query: 253 -VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG-- 309
G +V Y LI C ++ +E+A E+ M + GL P+ V+Y+T+IS + + G
Sbjct: 701 SAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYI 760
Query: 310 --------ELGKAYELKIETEDKAI 326
EL K Y + E+ + A+
Sbjct: 761 DMAVTLVTELSKKYNIPSESFEAAV 785
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 124/261 (47%), Gaps = 43/261 (16%)
Query: 57 RIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYN 116
R E ++ L+ M GL +Y++VI C +I++A L+EM +G SP++VT+N
Sbjct: 405 RFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFN 464
Query: 117 SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 176
+ + Y R V K G+L + G PDV
Sbjct: 465 TFLSGYSVRGDVKKVHGVLEKLLVHGFKPDV----------------------------- 495
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
T+S ++ LC + + +AFD F+EML G+ P+E+TY L+ +CC G+ ++
Sbjct: 496 ------ITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRS 549
Query: 237 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAV 296
L +M G PD + YNA I C + +V++A E+L+ M +GL P+
Sbjct: 550 VKLFAKMKENGLSPD--------LYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNF 601
Query: 297 SYSTVISGFCQIGELGKAYEL 317
+YST+I + G +A E+
Sbjct: 602 TYSTLIKALSESGRESEAREM 622
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 124/583 (21%), Positives = 221/583 (37%), Gaps = 116/583 (19%)
Query: 47 QSLKR-----LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLS 101
QSLK L R+G + + ++L+ ++ G + + +IG + L + + +
Sbjct: 110 QSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFA 169
Query: 102 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXX 161
++ G PS YN+++ A + +S+D A + M G PD +YN +I C
Sbjct: 170 QISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKG 229
Query: 162 XXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYT 221
+G P+ TY+ L++ + R+ EA M ++P+E T
Sbjct: 230 VVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIR 289
Query: 222 -------RLLNAC----CLVGEFTKAFHL----HDEMIH--------------------K 246
R L C LVG K +L +D +++ +
Sbjct: 290 TFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGER 349
Query: 247 GFLPD--------------------------FVT-GFSPAIVTYNALIHGLCFLDRVEEA 279
G++PD FV+ G P Y L+ L R E
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 280 LEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMD 339
L+ M GL + SY+ VI C+ + A E +D+ I +L+
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGI-------SPNLV- 461
Query: 340 SLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 399
T+++ ++ Y G++++ + + G+ + +S++IN L R +E K
Sbjct: 462 ------TFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCL---CRAKEIK 512
Query: 400 RDLLYIASDGFLSM------PSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATA 453
A D F M P+ Y+IL+ +C ++ T
Sbjct: 513 D-----AFDCFKEMLEWGIEPNEITYNILIRSCCST--------------------GDTD 547
Query: 454 HTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLAL 513
+ L K K +G + D YN I C+ V KA + M+ G P F+ L
Sbjct: 548 RSVKLFAKMKENGLS-PDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTL 606
Query: 514 ISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKS 556
I AL + +E + ++ R + DS +++ E+++ KS
Sbjct: 607 IKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELDLRKS 649
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 9/269 (3%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L L R G + E +++ M + D T+++++ +C L + A ++ +I G
Sbjct: 127 LSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGC 186
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P TY S + +CRR VD A + + M + G + SY ++I
Sbjct: 187 DPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALS 246
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
D P+ TY+ L++ALC + SEA +LF++M G+ PD+ YT L+ + C
Sbjct: 247 LLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFC 306
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
+A L + M+ G +P+ ++TYNALI G C V +A+ +L M E
Sbjct: 307 SGDTLDEASGLLEHMLENGLMPN--------VITYNALIKGFC-KKNVHKAMGLLSKMLE 357
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYEL 317
L P+ ++Y+T+I+G C G L AY L
Sbjct: 358 QNLVPDLITYNTLIAGQCSSGNLDSAYRL 386
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 109/242 (45%), Gaps = 9/242 (3%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C+ G + EA+Q + + G D TY+S I C ++D+A + EM G +
Sbjct: 166 CKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNE 225
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
V+Y L++ +D+A+ +L M + P+V +Y +I C
Sbjct: 226 VSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQ 285
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
+ GI PD Y+ L+++ C L EA L ML G+ P+ +TY L+ C
Sbjct: 286 MSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKN 344
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
KA L +M+ + +PD ++TYN LI G C ++ A +L M E GL
Sbjct: 345 VHKAMGLLSKMLEQNLVPD--------LITYNTLIAGQCSSGNLDSAYRLLSLMEESGLV 396
Query: 293 PN 294
PN
Sbjct: 397 PN 398
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 20/199 (10%)
Query: 40 KKVGEAFQSLKRLCREG-------------------RIPEAEQMLEVMKCKGLFLDERTY 80
K+V AF+ K + + G +I EA +L MK + RTY
Sbjct: 204 KEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTY 263
Query: 81 SSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAE 140
+ +I C + A L +M G P Y L+ ++C D++D+A G+L M E
Sbjct: 264 TVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLE 323
Query: 141 RGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSE 200
GL P+V +YN +I FC +++ + PD TY++L+ C L
Sbjct: 324 NGLMPNVITYNALIKGFCKKNVHKAMGLLSKM-LEQNLVPDLITYNTLIAGQCSSGNLDS 382
Query: 201 AFDLFREMLRGGVSPDELT 219
A+ L M G+ P++ T
Sbjct: 383 AYRLLSLMEESGLVPNQRT 401
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 127/326 (38%), Gaps = 46/326 (14%)
Query: 185 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 244
Y++L+ +L + E L+ EML VSPD T+ L+N C +G +A +I
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 245 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISG 304
G PD+ TY + I G C V+ A ++ + M + G N VSY+ +I G
Sbjct: 183 QAGCDPDY--------FTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYG 234
Query: 305 FCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRAL 364
+ ++ +A L ++ +D + TY L+D+L G A+
Sbjct: 235 LFEAKKIDEALSLLVKMKDDNCCP-NVRTYTVLIDALC-------------GSGQKSEAM 280
Query: 365 QLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 424
L MS G Y+VLI EA L ++ +G MP+ Y+ L++
Sbjct: 281 NLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGL--MPNVITYNALIK 338
Query: 425 NCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCR 484
+ L+ ++L D T YN LI C
Sbjct: 339 GFCKKNVHKAMGLLSKMLEQNLVPDLIT----------------------YNTLIAGQCS 376
Query: 485 SHNVHKAYNMYMEMVHYGHAPHMFSV 510
S N+ AY + M G P+ +V
Sbjct: 377 SGNLDSAYRLLSLMEESGLVPNQRTV 402
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 109/268 (40%), Gaps = 45/268 (16%)
Query: 263 YNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETE 322
YN L+ L VEE + M E +SP+ +++T+++G+C++G + +E +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYV-------VEAK 175
Query: 323 DKAIWWL----DEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 378
W + D D + TY+S + + + A ++ +M+++G +
Sbjct: 176 QYVTWLIQAGCDPDYF-----------TYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRN 224
Query: 379 YVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELV 438
V+Y+ LI GL + + EA L+ + D P+ Y +L++ S KS
Sbjct: 225 EVSYTQLIYGLFEAKKIDEALSLLVKMKDDN--CCPNVRTYTVLIDALCGSGQKS----- 277
Query: 439 KDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 498
M K ++ K D MY +LI C + +A + M
Sbjct: 278 ----------------EAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHM 321
Query: 499 VHYGHAPHMFSVLALISALDDDRMYNEM 526
+ G P++ + ALI ++ M
Sbjct: 322 LENGLMPNVITYNALIKGFCKKNVHKAM 349
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 125/526 (23%), Positives = 216/526 (41%), Gaps = 89/526 (16%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
K L +G + +A L M+ G L+ +Y+ +I A + MI +GF
Sbjct: 160 FKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGF 219
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
PS+ TY+SL+ +R +D +G+L+ M GL P+V ++ I
Sbjct: 220 RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYE 279
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG----------------- 211
D+G PD TY+ L++ALC ++L A ++F +M G
Sbjct: 280 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFS 339
Query: 212 ------------------GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 253
G PD +T+T L++A C G F +AF D M +G LP+
Sbjct: 340 DNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN-- 397
Query: 254 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGK 313
+ TYN LI GL + R+++ALE+ M +G+ P A +Y I + + G+
Sbjct: 398 ------LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS 451
Query: 314 AYEL--KIETE---------DKAIWWLDEDTYDSLMDSLSY----------EDTYSSVMN 352
A E K++T+ + +++ L + D + Y TY+ +M
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 353 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 412
Y G + A++L +M +G + + LIN L+K R EA + +++
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK--MFMRMKEMKL 569
Query: 413 MPSYTVYDILLENCS-NSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTD 471
P+ Y+ LL N + + +EL + + + T +T
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT---------------- 613
Query: 472 GGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
+++ L C++ V A M +M+ G P +F+ +I L
Sbjct: 614 --LFDCL----CKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 181/452 (40%), Gaps = 86/452 (19%)
Query: 1 MKLLRASFTAALKMALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPE 60
M LL+ T LK NV + IR A K+ EA++ LKR+ EG P+
Sbjct: 243 MGLLKEMETLGLKP--NVYTFTICIRVLGRAG--------KINEAYEILKRMDDEGCGPD 292
Query: 61 -------------------AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLS 101
A+++ E MK D TY +++ F + +DS S
Sbjct: 293 VVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWS 352
Query: 102 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXX 161
EM G P VVT+ LV A C+ + +A L M ++G+ P++ +YN +I
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 162 XXXXXXXXXXXXVDKGIFPDAATYSSLME------------------------------- 190
G+ P A TY ++
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Query: 191 ----ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHK 246
+L R EA +F + G+ PD +TY ++ VGE +A L EM+
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 247 GFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFC 306
G PD ++ N+LI+ L DRV+EA ++ M EM L P V+Y+T+++G
Sbjct: 533 GCEPD--------VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584
Query: 307 QIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQL 366
+ G++ +A EL E + + T+++L D L D + AL++
Sbjct: 585 KNGKIQEAIEL-FEGMVQKGCPPNTITFNTLFDCLCKND-------------EVTLALKM 630
Query: 367 DHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
M G + Y+ +I GL K + +EA
Sbjct: 631 LFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 128/539 (23%), Positives = 214/539 (39%), Gaps = 110/539 (20%)
Query: 48 SLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG 107
SL L + GR EA+Q+ +K GL D TY+ ++ + + +ID A LLSEM+ G
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 108 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
P V+ NSL+ + D VD+A + M E L P V +YN +++
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
V KG P+ T+++L + LC ++ A + +M+ G PD TY ++
Sbjct: 594 ELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653
Query: 228 CLVGEFTKA---FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 284
G+ +A FH ++++ PDF VT L+ G+ +E+A +I+
Sbjct: 654 VKNGQVKEAMCFFHQMKKLVY----PDF--------VTLCTLLPGVVKASLIEDAYKIIT 701
Query: 285 G---------------------MPEMGLSPNAVSYST--VISGFCQIGE----------- 310
+ E G+ NAVS+S V +G C+ G+
Sbjct: 702 NFLYNCADQPANLFWEDLIGSILAEAGID-NAVSFSERLVANGICRDGDSILVPIIRYSC 760
Query: 311 -----LGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED-------------------- 345
G + T+D + TY+ L+ L D
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQP-KLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 346 --TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 403
TY+ +++ Y G + +L +MS ++ + ++++I+GL K +A DL
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA-LDLY 878
Query: 404 Y-IASDGFLSMPSYTVYDILLENCSNS----EFKSLVELVKDYSMRDLSDDAATAHTTML 458
Y + SD S P+ Y L++ S S E K L E + DY R
Sbjct: 879 YDLMSDRDFS-PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR-------------- 923
Query: 459 HLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
+ +YN+LI ++ A ++ MV G P + + L+ L
Sbjct: 924 -----------PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 115/284 (40%), Gaps = 29/284 (10%)
Query: 61 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 120
A+ + +K G D TY+ ++ + KID L EM + +T+N ++
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 121 AYCRRDSVDKAVGIL-RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 179
+ +VD A+ + M++R SP +Y +I +D G
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
P+ A Y+ L+ A LF+ M++ GV PD TY+ L++ C+VG + H
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 240 HDEMIHKGFLPDFVT----------------------------GFSPAIVTYNALIHGLC 271
E+ G PD V G +P + TYN+LI L
Sbjct: 984 FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
VEEA +I + GL PN +++ +I G+ G+ AY
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAY 1087
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 1/201 (0%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L + GR+ EA+Q+ E M G + Y+ +I F + D+A L M+ +G P
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXX-XXXXXXXXXX 170
+ TY+ LV C VD+ + + + E GL+PDV YN +I+
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
+GI PD TY+SL+ L + + EA ++ E+ R G+ P+ T+ L+ L
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 231 GEFTKAFHLHDEMIHKGFLPD 251
G+ A+ ++ M+ GF P+
Sbjct: 1081 GKPEHAYAVYQTMVTGGFSPN 1101
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 145/378 (38%), Gaps = 46/378 (12%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK-GFSP 110
L + G++ EA MK K ++ D T +++ + I+ A+ +++ + P
Sbjct: 653 LVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQP 711
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKF-CXXXXXXXXXXX 169
+ + + L+ + +D AV + G+ D DS I ++ C
Sbjct: 712 ANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTL 771
Query: 170 XXXXV-DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
D G+ P TY+ L+ L + A D+F ++ G PD TY LL+A
Sbjct: 772 FEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 229 LVGEFTKAFHLHDEM----------IHKGFLPDFVTG------------------FSPAI 260
G+ + F L+ EM H + V FSP
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 261 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIE 320
TY LI GL R+ EA ++ GM + G PN Y+ +I+GF + GE A L
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Query: 321 TEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYV 380
+ + D TY L+D L G + L ++ G V
Sbjct: 952 MVKEGVRP-DLKTYSVLVDCLC-------------MVGRVDEGLHYFKELKESGLNPDVV 997
Query: 381 AYSVLINGLHKKARTREA 398
Y+++INGL K R EA
Sbjct: 998 CYNLIINGLGKSHRLEEA 1015
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 134/578 (23%), Positives = 229/578 (39%), Gaps = 84/578 (14%)
Query: 42 VGEAFQSLKRLCREGRIPE-------------------AEQMLEVMKCKGLFLDERTYSS 82
V EA Q L RL + +P+ + + L + +G +++S
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 83 VIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM-AER 141
V+ + C L ++ A ++ M G P V++YNSL+ +CR + A +L ++ A
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 142 GL--SPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 199
G PD+ S+N + + F + K P+ TYS+ ++ C L
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 259
A F M R +SP+ +T+T L++ C G+ A L+ EM S
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR--------VRMSLN 232
Query: 260 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKI 319
+VTY ALI G C ++ A E+ M E + PN++ Y+T+I GF Q G+ A +
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 320 ETEDKAIWWLDEDTYDSLMDSLS-----------YED-----------TYSSVMNDYLAE 357
+ ++ + LD Y ++ L ED ++++MN Y
Sbjct: 293 KMLNQGMR-LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 358 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 417
G M+ A+ + H + G+ VA S +I+G+ K + EA ++Y + +
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA---IVYFC----IEKANDV 404
Query: 418 VYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYN 476
+Y +L++ C +F + L S L D MY
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKF----------------------MYT 442
Query: 477 LLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRS 536
I C+ N+ A+ + MV G + + LI L + E V + L S
Sbjct: 443 SWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNS 502
Query: 537 CNLSDSEQLKVLSEINVTKSEIYALLDVLAEMAMDSLL 574
DS +L + + A D+L +M L+
Sbjct: 503 GISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 161/387 (41%), Gaps = 38/387 (9%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C+ G + A + MK L + T++ +I +C ++ A +L EM S +
Sbjct: 173 FCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VVTY +L+ +C++ + +A + M E + P+ Y +I F
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+++G+ D Y ++ LC +L EA ++ +M + + PD + +T ++NA G
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAI-----------------------VTYNALIH 268
A +++ ++I +GF PD V S I V Y LI
Sbjct: 353 RMKAAVNMYHKLIERGFEPD-VVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLID 411
Query: 269 GLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWW 328
LC E + + E GL P+ Y++ I+G C+ G L A++LK + +
Sbjct: 412 ALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGL-- 469
Query: 329 LDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 388
L+D L+ Y++++ ++G M A Q+ +M G + +LI
Sbjct: 470 --------LLDLLA----YTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
Query: 389 LHKKARTREAKRDLLYIASDGFLSMPS 415
K+ A LL + G ++ S
Sbjct: 518 YEKEGNMAAASDLLLDMQRRGLVTAVS 544
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 139/326 (42%), Gaps = 24/326 (7%)
Query: 12 LKMALNVNIYNGMIRGFATAAGKSDSE---SKKVGEAFQS--------LKRLCREGRIPE 60
++M+LNV Y +I GF +E S+ V + + + + G
Sbjct: 227 VRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDN 286
Query: 61 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 120
A + L M +G+ LD Y +I C K+ A ++ +M P +V + +++
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346
Query: 121 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 180
AY + + AV + + ERG PDV + + +I ++K
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGI--AKNGQLHEAIVYFCIEKA--- 401
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
+ Y+ L++ALC E E LF ++ G+ PD+ YT + C G AF L
Sbjct: 402 NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLK 461
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
M+ +G L D ++ Y LI+GL + EA ++ M G+SP++ +
Sbjct: 462 TRMVQEGLLLD--------LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDL 513
Query: 301 VISGFCQIGELGKAYELKIETEDKAI 326
+I + + G + A +L ++ + + +
Sbjct: 514 LIRAYEKEGNMAAASDLLLDMQRRGL 539
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 178/370 (48%), Gaps = 25/370 (6%)
Query: 64 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 123
ML++MK G+ D T SS++ FC N I A + +M G VV L+ C
Sbjct: 1 MLKMMKL-GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLC 59
Query: 124 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 183
+ V A+ +L+ M +RG+SP+V +Y+ +I+ C K I P+
Sbjct: 60 KNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVI 119
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
T+S+L++A +LS+ +++ M++ + P+ TY+ L+ C+ +A + D M
Sbjct: 120 TFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM 179
Query: 244 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVIS 303
I KG P+ +VTY+ L +G RV++ +++L MP+ G++ N VS +T+I
Sbjct: 180 ISKGCTPN--------VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIK 231
Query: 304 GFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 363
G+ Q G++ D A+ T + L+ ++ +Y+ V+ A G +++A
Sbjct: 232 GYFQAGKI-----------DLALGVFGYMTSNGLIPNIR---SYNIVLAGLFANGEVEKA 277
Query: 364 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 423
L M + + Y+++I+G+ K +EA DL Y + P + Y I++
Sbjct: 278 LSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEA-YDLFYKLKFKRVE-PDFKAYTIMI 335
Query: 424 ENCSNSEFKS 433
+ + ++
Sbjct: 336 AELNRAGMRT 345
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 126/266 (47%), Gaps = 8/266 (3%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ + A ++L+ MK +G+ + TYSS+I C ++ A L EM +K +P+
Sbjct: 58 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 117
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V+T+++L+ AY +R + K + + M + + P+V +Y+ +I C
Sbjct: 118 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 177
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ KG P+ TYS+L R+ + L +M + GV+ + ++ L+ G
Sbjct: 178 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 237
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ A + M G +P+ I +YN ++ GL VE+AL M +
Sbjct: 238 KIDLALGVFGYMTSNGLIPN--------IRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 289
Query: 292 SPNAVSYSTVISGFCQIGELGKAYEL 317
+ ++Y+ +I G C+ + +AY+L
Sbjct: 290 DLDIITYTIMIHGMCKACMVKEAYDL 315
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 123/283 (43%), Gaps = 9/283 (3%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C I +A + M+ G+ D + +I C + A +L M +G SP+
Sbjct: 23 FCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPN 82
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VVTY+SL+ C+ + A L M + ++P+V +++ +I +
Sbjct: 83 VVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYK 142
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ I P+ TYSSL+ LC+ R+ EA + M+ G +P+ +TY+ L N
Sbjct: 143 MMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSS 202
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
L D+M +G + V+ N LI G +++ AL + M GL
Sbjct: 203 RVDDGIKLLDDMPQRGVAAN--------TVSCNTLIKGYFQAGKIDLALGVFGYMTSNGL 254
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTY 334
PN SY+ V++G GE+ KA + E K LD TY
Sbjct: 255 IPNIRSYNIVLAGLFANGEVEKALS-RFEHMQKTRNDLDIITY 296
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 160/389 (41%), Gaps = 47/389 (12%)
Query: 138 MAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQR 197
M + G+ PD+ + + +++ FC GI D + L++ LC +
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 198 LSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS 257
+ A ++ + M G+SP+ +TY+ L+ C G A EM K +
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKI--------N 115
Query: 258 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
P ++T++ALI ++ + + + M +M + PN +YS++I G C +
Sbjct: 116 PNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRV------ 169
Query: 318 KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLS 377
D+AI LD ++ TYS++ N + + ++L DM + G +
Sbjct: 170 -----DEAIKMLDLMISKGCTPNVV---TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAA 221
Query: 378 SYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENC-SNSEFKSLVE 436
+ V+ + LI G + + A Y+ S+G + P+ Y+I+L +N E +
Sbjct: 222 NTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLI--PNIRSYNIVLAGLFANGEVEK--- 276
Query: 437 LVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYM 496
A + H++ N D Y ++I C++ V +AY+++
Sbjct: 277 ----------------ALSRFEHMQKT---RNDLDIITYTIMIHGMCKACMVKEAYDLFY 317
Query: 497 EMVHYGHAPHMFSVLALISALDDDRMYNE 525
++ P + +I+ L+ M E
Sbjct: 318 KLKFKRVEPDFKAYTIMIAELNRAGMRTE 346
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC R+ EA +ML++M KG + TYS++ F +++D LL +M +G + +
Sbjct: 163 LCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAAN 222
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V+ N+L+ Y + +D A+G+ M GL P++ SYN V++
Sbjct: 223 TVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFE 282
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
D TY+ ++ +C + EA+DLF ++ V PD YT ++ G
Sbjct: 283 HMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 342
Query: 232 EFTKAFHLH 240
T+A L+
Sbjct: 343 MRTEADALN 351
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 179/404 (44%), Gaps = 59/404 (14%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L C+ GR+ EA ++L + + G L R YSS+I + A L + M+ K
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P ++ Y L+ + ++ A+ +L +M +G+SPD YN VI C
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRS 394
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ FPDA T++ L+ ++C + EA ++F E+ + G SP T+ L++ C
Sbjct: 395 LQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLC 454
Query: 229 LVGEFTKA-FHLH----------------------DEMIHKGF-------LPDFV-TGFS 257
GE +A LH D M+ G L F TG S
Sbjct: 455 KSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSS 514
Query: 258 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
P IV+YN LI+G C ++ AL++L + GLSP++V+Y+T+I+G ++G +A++L
Sbjct: 515 PDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Query: 318 KIETEDKAIWWLDEDTYDSLMD--------------SLSY-------EDTYSSVMNDYLA 356
+D + Y SLM + Y +D ++ +
Sbjct: 575 FYAKDD---FRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFK 631
Query: 357 EGNMQRALQ--LDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
EG +RAL+ ++ D +D + Y++ + GL + R EA
Sbjct: 632 EGETERALRRLIELDTRKDEL--TLGPYTIWLIGLCQSGRFHEA 673
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 171/389 (43%), Gaps = 35/389 (8%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L ++GR +A++M + M +G+ + TY+ +I C D A L EM G P
Sbjct: 208 LYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPD 267
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V +N+L+ +C+ + +A +LR + G + Y+ +I
Sbjct: 268 SVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA 327
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ K I PD Y+ L++ L ++ +A L M G+SPD Y ++ A C G
Sbjct: 328 NMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRG 387
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ L EM PD T+ LI +C V EA EI + + G
Sbjct: 388 LLEEGRSLQLEMSETESFPD--------ACTHTILICSMCRNGLVREAEEIFTEIEKSGC 439
Query: 292 SPNAVSYSTVISGFCQIGELGKAYEL--KIETEDKAIWWL-----DEDTYDSLMDSLS-- 342
SP+ +++ +I G C+ GEL +A L K+E A +L ++D++++S S
Sbjct: 440 SPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSIL 499
Query: 343 --YED--------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 386
Y D +Y+ ++N + G++ AL+L + + G V Y+ LI
Sbjct: 500 KAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559
Query: 387 NGLHKKARTREAKRDLLYIASDGFLSMPS 415
NGLH+ R EA + L+ A D F P+
Sbjct: 560 NGLHRVGREEEAFK--LFYAKDDFRHSPA 586
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 120/545 (22%), Positives = 205/545 (37%), Gaps = 123/545 (22%)
Query: 63 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNS----- 117
Q LE +K G+ +D + +I + + + A M P V TYN
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 118 --------LVFAY------C-----------------RRDSVDKAVGILRAMAERGLSPD 146
L FA C ++ A + M RG+SP+
Sbjct: 173 MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232
Query: 147 VDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFR 206
+Y +IS C G +PD+ +++L++ C R+ EAF+L R
Sbjct: 233 RVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLR 292
Query: 207 EMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNAL 266
+ G Y+ L++ +T+AF L+ M+ K PD I+ Y L
Sbjct: 293 LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD--------IILYTIL 344
Query: 267 IHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAI 326
I GL ++E+AL++L MP G+SP+ Y+ VI C G L + L++E +
Sbjct: 345 IQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSET-- 402
Query: 327 WWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 386
+S D+ T++ ++ G ++ A ++ ++ + G S ++ LI
Sbjct: 403 --------ESFPDAC----THTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Query: 387 NGLHKKARTREAK---------------------------------------RDLLYIAS 407
+GL K +EA+ RDL + A
Sbjct: 451 DGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFAD 510
Query: 408 DGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM--LHLKNKT 464
G S P Y++L+ C + ++L+ ++ LS D+ T +T + LH +
Sbjct: 511 TG--SSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGRE 568
Query: 465 DGENKT---------DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALIS 515
+ K +Y L+ CR V A+N++M+ L IS
Sbjct: 569 EEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMK------------YLKKIS 616
Query: 516 ALDDD 520
LDD+
Sbjct: 617 CLDDE 621
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 147/350 (42%), Gaps = 37/350 (10%)
Query: 52 LCREGRIPEAEQML---EVMKCKGLFL-----DERTYSSVIGWFCNLNKIDSAHTLLSEM 103
LC+ G + EA +L EV + LFL R++ +++ I A+ L+
Sbjct: 453 LCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV----ESGSILKAYRDLAHF 508
Query: 104 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 163
G SP +V+YN L+ +CR +D A+ +L + +GLSPD +YN +I+
Sbjct: 509 ADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGRE 568
Query: 164 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 223
D P A Y SLM C ++++ AF+L+ + L+ D+ T +
Sbjct: 569 EEAFKLFYAKDDFRHSP--AVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEI 626
Query: 224 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 283
C GE +A +I D +T + Y + GLC R EAL +
Sbjct: 627 -EQCFKEGETERALR---RLIELDTRKDELT-----LGPYTIWLIGLCQSGRFHEALMVF 677
Query: 284 RGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSY 343
+ E + S +I G C+ +L A E+ + T D + L + L+ SL
Sbjct: 678 SVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNN-FKLMPRVCNYLLSSL-L 735
Query: 344 EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY-LSSYVAYSVLINGLHKK 392
E T M+ QL + M R GY + S + + +L H+K
Sbjct: 736 EST-----------EKMEIVSQLTNRMERAGYNVDSMLRFEILKYHRHRK 774
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 224/514 (43%), Gaps = 40/514 (7%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG--FS 109
C+ + EA ++ + M+ D TY+++I C K+ AH +LS M+ K
Sbjct: 219 FCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVH 278
Query: 110 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 169
P+VV+Y +LV YC + +D+AV + M RGL P+ +YN +I
Sbjct: 279 PNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDI 338
Query: 170 XXXXVD--KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
D PDA T++ L++A C L A +F+EML + PD +Y+ L+
Sbjct: 339 LIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTL 398
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
C+ EF +A L +E+ K L P YN + LC + ++A ++ R +
Sbjct: 399 CMRNEFDRAETLFNELFEKEVLLG-KDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLM 457
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 347
+ G+ + SY T+I+G C+ G+ AYEL + + + D +TY+ L+D L
Sbjct: 458 KRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRRE-FVPDLETYELLIDGL------ 509
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 407
+ LA +QR L R YL + ++ L K+ E+ L+ +
Sbjct: 510 LKIGEALLAHDTLQRML-------RSSYLPVATTFHSVLAELAKRKFANES-FCLVTLML 561
Query: 408 DGFLSMP---SYTVYDILLENCSNSEFKSLVELVKD----YSMRDL------SDDAATAH 454
+ + S V +L + + +V L+ D M +L + AH
Sbjct: 562 EKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAH 621
Query: 455 TTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 514
T +L K+ D N +I C+ +A+++Y E+V G+ + + L
Sbjct: 622 TLVLFCLEKS---QMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLR 678
Query: 515 SALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVL 548
+AL+ + E+ +V + R L +S+ VL
Sbjct: 679 NALEAAGKWEELQFV---SKRMATLRESDDCSVL 709
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 175/450 (38%), Gaps = 83/450 (18%)
Query: 75 LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 134
L +R ++S+I + N + L M G SPSV+T+NSL+ I
Sbjct: 136 LQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLL-------------SI 182
Query: 135 LRAMAERGLSPDV-DSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 193
L G++ D+ D R G+ PD+ T+++L+ C
Sbjct: 183 LLKRGRTGMAHDLFDEMRRTY----------------------GVTPDSYTFNTLINGFC 220
Query: 194 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 253
+ EAF +F++M +PD +TY +++ C G+ A ++ M+ K
Sbjct: 221 KNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKA------ 274
Query: 254 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGK 313
T P +V+Y L+ G C ++EA+ + M GL PNAV+Y+T+I G L +
Sbjct: 275 TDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKG------LSE 328
Query: 314 AYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRD 373
A+ E K I D + + T++ ++ + G++ A+++ +M
Sbjct: 329 AHRYD---EIKDILIGGNDAFTTFAPDAC---TFNILIKAHCDAGHLDAAMKVFQEMLNM 382
Query: 374 GYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL-----SMPSYTVYDILLEN-CS 427
+YSVLI L + A+ + L P Y+ + E C+
Sbjct: 383 KLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCA 442
Query: 428 NSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHN 487
N + K ++ + R + D + Y LI HCR
Sbjct: 443 NGKTKQAEKVFRQLMKRGVQDPPS-----------------------YKTLITGHCREGK 479
Query: 488 VHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
AY + + M+ P + + LI L
Sbjct: 480 FKPAYELLVLMLRREFVPDLETYELLIDGL 509
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 186/435 (42%), Gaps = 28/435 (6%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K LC+ + A ++ M + D TY +++ C +ID A LL EM ++G
Sbjct: 194 IKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGC 253
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
SPS V YN L+ C++ + + ++ M +G P+ +YN +I C
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 313
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
V P+ TY +L+ L ++R ++A L M G ++ Y+ L++
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLF 373
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G+ +A L +M KG P+ IV Y+ L+ GLC + EA EIL M
Sbjct: 374 KEGKAEEAMSLWRKMAEKGCKPN--------IVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
G PNA +YS+++ GF + G +A ++ W + D + YS
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQV----------WKEMDKTGCSRNKF----CYS 471
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY---I 405
+++ G ++ A+ + M G VAYS +I GL A + LY +
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK--LYHEML 529
Query: 406 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 464
+ S P Y+ILL+ C + V+L+ R D T +T + L K+
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589
Query: 465 DGENKTDGGMYNLLI 479
+ +K + L++
Sbjct: 590 NSCDKGRSFLEELVV 604
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 152/329 (46%), Gaps = 35/329 (10%)
Query: 13 KMALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKG 72
++ L+ +YN +I GF C+ GRI +AE + M G
Sbjct: 215 RVKLSTVVYNALISGF------------------------CKAGRIEKAEALKSYMSKIG 250
Query: 73 LFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAV 132
D TY+ ++ ++ + N + A +++EM+ G +YN L+ +CR DK
Sbjct: 251 CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCY 310
Query: 133 G-ILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 191
+++ M RG DV SY+ +I FC KG+ + TY+SL++A
Sbjct: 311 NFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKA 369
Query: 192 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 251
E S A L +M G+SPD + YT +L+ C G KA+ + ++MI PD
Sbjct: 370 FLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPD 429
Query: 252 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGEL 311
++YN+LI GLC RV EA+++ M P+ +++ +I G + +L
Sbjct: 430 --------AISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKL 481
Query: 312 GKAYELKIETEDKAIWWLDEDTYDSLMDS 340
AY++ + DK + LD D D+L+ +
Sbjct: 482 SAAYKVWDQMMDKG-FTLDRDVSDTLIKA 509
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 166/361 (45%), Gaps = 25/361 (6%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG-FSP 110
L R G++ +A ++ M G+ D + ++++ C+ K+D A+ +++E I
Sbjct: 159 LFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKL 218
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
S V YN+L+ +C+ ++KA + M++ G PD+ +YN +++ +
Sbjct: 219 STVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVM 278
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFD-LFREMLRGGVSPDELTYTRLLNACCL 229
V GI DA +Y+ L++ C + ++ + +EM G D ++Y+ L+ C
Sbjct: 279 AEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCR 337
Query: 230 VGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 289
KA+ L +EM KG + + +VTY +LI A ++L M E+
Sbjct: 338 ASNTRKAYRLFEEMRQKGMVMN--------VVTYTSLIKAFLREGNSSVAKKLLDQMTEL 389
Query: 290 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 349
GLSP+ + Y+T++ C+ G + KAY + + D ++ D++SY +S
Sbjct: 390 GLSPDRIFYTTILDHLCKSGNVDKAYGV----------FNDMIEHEITPDAISY----NS 435
Query: 350 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 409
+++ G + A++L DM + + +I GL + + A + + G
Sbjct: 436 LISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495
Query: 410 F 410
F
Sbjct: 496 F 496
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 200/497 (40%), Gaps = 56/497 (11%)
Query: 45 AFQS-LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 103
A++S + L + G I A Q+ + M+ + Y+ IG ++ + A + +M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 104 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 163
GFS TY+ + C+ D +L M G PD+ ++N + C
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 164 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 223
V +G PD +Y+ L+ L ++++A +++ M+R GVSPD L
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 224 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 283
+ C + A+ + E I + + V YNALI G C R+E+A +
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARV-------KLSTVVYNALISGFCKAGRIEKAEALK 243
Query: 284 RGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMD---S 340
M ++G P+ V+Y+ +++ + L +A + E I LD +Y+ L+
Sbjct: 244 SYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGI-QLDAYSYNQLLKRHCR 302
Query: 341 LSYED-------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 381
+S+ D +YS+++ + N ++A +L +M + G + + V
Sbjct: 303 VSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVT 362
Query: 382 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKD 440
Y+ LI ++ + AK+ L + G P Y +L++ C + + D
Sbjct: 363 YTSLIKAFLREGNSSVAKKLLDQMTELGL--SPDRIFYTTILDHLCKSGNVDKAYGVFND 420
Query: 441 YSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVH 500
+++ DA + YN LI CRS V +A ++ +M
Sbjct: 421 MIEHEITPDAIS----------------------YNSLISGLCRSGRVTEAIKLFEDMKG 458
Query: 501 YGHAPHMFSVLALISAL 517
P + +I L
Sbjct: 459 KECCPDELTFKFIIGGL 475
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 130/269 (48%), Gaps = 8/269 (2%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L +C G + A + + + GL D Y+++I +CNL + D A ++ G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
PS+ T L+ A R S+ A + R M GL DV +YN ++ +
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
GI PD ATY+ L+ ++ V + EA ++ E++R G P L +T ++
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G+F +AF L M PD +VT +AL+HG C R+E+A+ + + +
Sbjct: 560 KRGDFQEAFILWFYMADLRMKPD--------VVTCSALLHGYCKAQRMEKAIVLFNKLLD 611
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYEL 317
GL P+ V Y+T+I G+C +G++ KA EL
Sbjct: 612 AGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 194/482 (40%), Gaps = 48/482 (9%)
Query: 43 GEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE 102
G LK + R + A + +E M +G L+ S I +C+ D LL
Sbjct: 237 GVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMG 296
Query: 103 MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 162
M G P +V + + C+ + +A +L + G+S D S + VI FC
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 163 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 222
+ P+ YSS + +C + A +F+E+ G+ PD + YT
Sbjct: 357 PEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 223 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 282
+++ C +G KAF ++ +G P++ T LI + +A +
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLK--------SGNPPSLTTSTILIGACSRFGSISDAESV 465
Query: 283 LRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS 342
R M GL + V+Y+ ++ G+ + +L K +EL E I D TY+ L+ S+
Sbjct: 466 FRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGI-SPDVATYNILIHSM- 523
Query: 343 YEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL 402
V+ Y+ E N ++ ++ R G++ S +A++ +I G K+ +EA
Sbjct: 524 -------VVRGYIDEAN-----EIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571
Query: 403 LYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 462
Y+A L M V CS L+ Y + A +L
Sbjct: 572 FYMAD---LRMKPDVV------TCS--------ALLHGYCKAQRMEKAIVLFNKLL---- 610
Query: 463 KTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 522
D K D +YN LI +C ++ KA + MV G P+ + AL+ L+ R
Sbjct: 611 --DAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRF 668
Query: 523 YN 524
N
Sbjct: 669 VN 670
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 131/284 (46%), Gaps = 25/284 (8%)
Query: 3 LLRAS--FTAALKMAL--NVNIYNGMIRGFATAAGKSDSESKKVGEAFQS---------- 48
+LRAS F ++ L + Y MI G+ G++D + G +S
Sbjct: 389 MLRASTIFQEIFELGLLPDCVCYTTMIDGYCNL-GRTDKAFQYFGALLKSGNPPSLTTST 447
Query: 49 --LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 106
+ R G I +AE + MK +GL LD TY++++ + ++++ L+ EM +
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
G SP V TYN L+ + R +D+A I+ + RG P ++ VI F
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 167 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
D + PD T S+L+ C QR+ +A LF ++L G+ PD + Y L++
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 227 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGL 270
C VG+ KA L M+ +G LP+ T++AL+ GL
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPN--------ESTHHALVLGL 663
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 171/426 (40%), Gaps = 61/426 (14%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+ +LC+ G + EA +L +K G+ D + SSVI FC + K + A L+ +
Sbjct: 313 IDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR-- 370
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P++ Y+S + C + +A I + + E GL PD Y +I +C
Sbjct: 371 -PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ G P T + L+ A +S+A +FR M G+ D +TY L++
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
+ K F L DEM G PD + TYN LIH + ++EA EI+ +
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPD--------VATYNILIHSMVVRGYIDEANEIISELIR 541
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
G P+ ++++ VI GF + G+ +A+ L D + D T S
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR---MKPDVV-----------TCS 587
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD 408
++++ Y M++A+ L + + G V Y+ LI+G
Sbjct: 588 ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGY------------------- 628
Query: 409 GFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN 468
CS + + EL+ R + + +T H +L L+ K +
Sbjct: 629 -----------------CSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNS 671
Query: 469 KTDGGM 474
+T M
Sbjct: 672 ETHASM 677
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 155/359 (43%), Gaps = 48/359 (13%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
GIFP SL++ + L A + ML G + + + C G F K
Sbjct: 231 GIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKG 290
Query: 237 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAV 296
+ L M H G PD IV + I LC ++EA +L + G+S ++V
Sbjct: 291 WELLMGMKHYGIRPD--------IVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSV 342
Query: 297 SYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLA 356
S S+VI GFC++G+ +A +L I + + L + + YSS +++ +
Sbjct: 343 SVSSVIDGFCKVGKPEEAIKL-IHS-----FRLRPNIF-----------VYSSFLSNICS 385
Query: 357 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 416
G+M RA + ++ G L V Y+ +I+G RT +A + + G + PS
Sbjct: 386 TGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG--NPPSL 443
Query: 417 TVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYN 476
T IL+ CS F S+ DA + M KT+G K D YN
Sbjct: 444 TTSTILIGACS--RFGSI-------------SDAESVFRNM-----KTEGL-KLDVVTYN 482
Query: 477 LLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLR 535
L+ + ++H ++K + + EM G +P + + LI ++ +E + +I+ +R
Sbjct: 483 NLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 130/269 (48%), Gaps = 8/269 (2%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L +C G + A + + + GL D Y+++I +CNL + D A ++ G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
PS+ T L+ A R S+ A + R M GL DV +YN ++ +
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
GI PD ATY+ L+ ++ V + EA ++ E++R G P L +T ++
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G+F +AF L M PD +VT +AL+HG C R+E+A+ + + +
Sbjct: 560 KRGDFQEAFILWFYMADLRMKPD--------VVTCSALLHGYCKAQRMEKAIVLFNKLLD 611
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYEL 317
GL P+ V Y+T+I G+C +G++ KA EL
Sbjct: 612 AGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 194/482 (40%), Gaps = 48/482 (9%)
Query: 43 GEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE 102
G LK + R + A + +E M +G L+ S I +C+ D LL
Sbjct: 237 GVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMG 296
Query: 103 MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 162
M G P +V + + C+ + +A +L + G+S D S + VI FC
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 163 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 222
+ P+ YSS + +C + A +F+E+ G+ PD + YT
Sbjct: 357 PEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 223 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 282
+++ C +G KAF ++ +G P++ T LI + +A +
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLK--------SGNPPSLTTSTILIGACSRFGSISDAESV 465
Query: 283 LRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS 342
R M GL + V+Y+ ++ G+ + +L K +EL E I D TY+ L+ S+
Sbjct: 466 FRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGI-SPDVATYNILIHSM- 523
Query: 343 YEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL 402
V+ Y+ E N ++ ++ R G++ S +A++ +I G K+ +EA
Sbjct: 524 -------VVRGYIDEAN-----EIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571
Query: 403 LYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 462
Y+A L M V CS L+ Y + A +L
Sbjct: 572 FYMAD---LRMKPDVV------TCS--------ALLHGYCKAQRMEKAIVLFNKLL---- 610
Query: 463 KTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 522
D K D +YN LI +C ++ KA + MV G P+ + AL+ L+ R
Sbjct: 611 --DAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRF 668
Query: 523 YN 524
N
Sbjct: 669 VN 670
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 131/284 (46%), Gaps = 25/284 (8%)
Query: 3 LLRAS--FTAALKMAL--NVNIYNGMIRGFATAAGKSDSESKKVGEAFQS---------- 48
+LRAS F ++ L + Y MI G+ G++D + G +S
Sbjct: 389 MLRASTIFQEIFELGLLPDCVCYTTMIDGYCNL-GRTDKAFQYFGALLKSGNPPSLTTST 447
Query: 49 --LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 106
+ R G I +AE + MK +GL LD TY++++ + ++++ L+ EM +
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
G SP V TYN L+ + R +D+A I+ + RG P ++ VI F
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 167 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
D + PD T S+L+ C QR+ +A LF ++L G+ PD + Y L++
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 227 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGL 270
C VG+ KA L M+ +G LP+ T++AL+ GL
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPN--------ESTHHALVLGL 663
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 171/426 (40%), Gaps = 61/426 (14%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+ +LC+ G + EA +L +K G+ D + SSVI FC + K + A L+ +
Sbjct: 313 IDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR-- 370
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P++ Y+S + C + +A I + + E GL PD Y +I +C
Sbjct: 371 -PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ G P T + L+ A +S+A +FR M G+ D +TY L++
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
+ K F L DEM G PD + TYN LIH + ++EA EI+ +
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPD--------VATYNILIHSMVVRGYIDEANEIISELIR 541
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
G P+ ++++ VI GF + G+ +A+ L D + D T S
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR---MKPDVV-----------TCS 587
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD 408
++++ Y M++A+ L + + G V Y+ LI+G
Sbjct: 588 ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGY------------------- 628
Query: 409 GFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN 468
CS + + EL+ R + + +T H +L L+ K +
Sbjct: 629 -----------------CSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNS 671
Query: 469 KTDGGM 474
+T M
Sbjct: 672 ETHASM 677
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 155/359 (43%), Gaps = 48/359 (13%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
GIFP SL++ + L A + ML G + + + C G F K
Sbjct: 231 GIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKG 290
Query: 237 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAV 296
+ L M H G PD IV + I LC ++EA +L + G+S ++V
Sbjct: 291 WELLMGMKHYGIRPD--------IVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSV 342
Query: 297 SYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLA 356
S S+VI GFC++G+ +A +L I + + L + + YSS +++ +
Sbjct: 343 SVSSVIDGFCKVGKPEEAIKL-IHS-----FRLRPNIF-----------VYSSFLSNICS 385
Query: 357 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 416
G+M RA + ++ G L V Y+ +I+G RT +A + + G + PS
Sbjct: 386 TGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG--NPPSL 443
Query: 417 TVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYN 476
T IL+ CS F S+ DA + M KT+G K D YN
Sbjct: 444 TTSTILIGACS--RFGSI-------------SDAESVFRNM-----KTEGL-KLDVVTYN 482
Query: 477 LLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLR 535
L+ + ++H ++K + + EM G +P + + LI ++ +E + +I+ +R
Sbjct: 483 NLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 162/348 (46%), Gaps = 25/348 (7%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L LC++G+ EA ++L M+ +G+ + +Y++V+ C +D A + S ++ KG
Sbjct: 450 LSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGL 509
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P+ TY+ L+ R A+ ++ M + + Y +I+ C
Sbjct: 510 KPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARE 569
Query: 169 XXXXXV-DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
+ +K + +Y+S+++ E + A + EM G+SP+ +TYT L+N
Sbjct: 570 LLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGL 629
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
C +A + DEM +KG D I Y ALI G C +E A + +
Sbjct: 630 CKNNRMDQALEMRDEMKNKGVKLD--------IPAYGALIDGFCKRSNMESASALFSELL 681
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYE-DT 346
E GL+P+ Y+++ISGF +G + A +L + L D L + T
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM---------------LKDGLRCDLGT 726
Query: 347 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR 394
Y+++++ L +GN+ A +L +M G + + Y+V++NGL KK +
Sbjct: 727 YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 149/298 (50%), Gaps = 11/298 (3%)
Query: 43 GEAFQSL-KRLCREGRIPEAEQML-EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLL 100
G +Q++ LC+ G+ +A ++L +++ K L + +Y+S+I F ++DSA
Sbjct: 548 GVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAY 607
Query: 101 SEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXX 160
EM G SP+V+TY SL+ C+ + +D+A+ + M +G+ D+ +Y +I FC
Sbjct: 608 EEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKR 667
Query: 161 XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTY 220
+++G+ P Y+SL+ + A DL+++ML+ G+ D TY
Sbjct: 668 SNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTY 727
Query: 221 TRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEAL 280
T L++ G A L+ EM G +PD + Y +++GL + + +
Sbjct: 728 TTLIDGLLKDGNLILASELYTEMQAVGLVPDE--------IIYTVIVNGLSKKGQFVKVV 779
Query: 281 EILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLM 338
++ M + ++PN + Y+ VI+G + G L +A+ L E DK I D T+D L+
Sbjct: 780 KMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILP-DGATFDILV 836
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/539 (21%), Positives = 217/539 (40%), Gaps = 89/539 (16%)
Query: 35 SDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKID 94
SD S V A + C+ + A + + M+ +G + T+S +I WF +++
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME 391
Query: 95 SAHTLLSEMIAKGFSPSVVTYNSLVFAY-------------------------------- 122
A +M G +PSV ++++ +
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILS 451
Query: 123 --CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 180
C++ D+A +L M RG+ P+V SYN V+ C ++KG+ P
Sbjct: 452 WLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKP 511
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
+ TYS L++ A ++ M + + + Y ++N C VG+ +KA L
Sbjct: 512 NNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
MI + L + ++YN++I G ++ A+ M G+SPN ++Y++
Sbjct: 572 ANMIEEKRL-------CVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624
Query: 301 VISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL------------------- 341
+++G C+ + +A E++ E ++K + LD Y +L+D
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGV-KLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 342 ---SYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
+ Y+S+++ + GNM AL L M +DG Y+ LI+GL K A
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILA 743
Query: 399 KRDLLYIASDGFLSMPSYTVYDILLENCSNS-EFKSLVELVKDYSMRDLSDDAATAHTTM 457
LY +P +Y +++ S +F +V++ ++ +++ +
Sbjct: 744 SE--LYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVL------ 795
Query: 458 LHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA 516
+YN +I H R N+ +A+ ++ EM+ G P + L+S
Sbjct: 796 ----------------IYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 117/503 (23%), Positives = 214/503 (42%), Gaps = 63/503 (12%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
++G + +A ++ + M G+ ++ +S+I C N + SA L +M +G SP+ V
Sbjct: 316 KQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSV 375
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
T++ L+ + + ++KA+ + M GL+P V + +I +
Sbjct: 376 TFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDES 435
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
+ G+ + ++++ LC + + EA +L +M G+ P+ ++Y ++ C
Sbjct: 436 FETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNM 494
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEE-ALEILRGMPEMGLS 292
A + ++ KG P+ TY+ LI G CF + E+ ALE++ M +
Sbjct: 495 DLARIVFSNILEKGLKPNN--------YTYSILIDG-CFRNHDEQNALEVVNHMTSSNIE 545
Query: 293 PNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL----------- 341
N V Y T+I+G C++G+ KA EL ++ + +Y+S++D
Sbjct: 546 VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVA 605
Query: 342 SYED-----------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 390
+YE+ TY+S+MN M +AL++ +M G AY LI+G
Sbjct: 606 AYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC 665
Query: 391 KKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDA 450
K++ A + +G PS +Y+ L+ S F++L +V A
Sbjct: 666 KRSNMESASALFSELLEEGL--NPSQPIYNSLI-----SGFRNLGNMVA----------A 708
Query: 451 ATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 510
+ ML DG + D G Y LI + N+ A +Y EM G P
Sbjct: 709 LDLYKKMLK-----DGL-RCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIY 762
Query: 511 LALISALDDD-------RMYNEM 526
+++ L +M+ EM
Sbjct: 763 TVIVNGLSKKGQFVKVVKMFEEM 785
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 116/512 (22%), Positives = 198/512 (38%), Gaps = 56/512 (10%)
Query: 47 QSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 106
++L L + + EA+++ M G+ D T ++ K A +LS I +
Sbjct: 203 RTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIER 262
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLS-PDVDSYNRVISKFCXXXXXXX 165
G P + Y+ V A C+ + A +LR M E+ L P ++Y VI
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDD 322
Query: 166 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
+ GI + +SL+ C L A LF +M + G SP+ +T++ L+
Sbjct: 323 AIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLP---------------------------DFVTGFSP 258
GE KA + +M G P F TG +
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLAN 442
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELK 318
V N ++ LC + +EA E+L M G+ PN VSY+ V+ G C+ + A +
Sbjct: 443 VFVC-NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 319 IETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 378
+K L + Y TYS +++ + Q AL++ + M+ +
Sbjct: 502 SNILEKG---LKPNNY-----------TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVN 547
Query: 379 YVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELV 438
V Y +INGL K +T +A+ L + + L + + I+ E S V
Sbjct: 548 GVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAY 607
Query: 439 KDYSMRDLSDDAATAHTTM------------LHLKNKTDGEN-KTDGGMYNLLIFEHCRS 485
++ +S + T + M L ++++ + K D Y LI C+
Sbjct: 608 EEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKR 667
Query: 486 HNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
N+ A ++ E++ G P +LIS
Sbjct: 668 SNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 116/521 (22%), Positives = 205/521 (39%), Gaps = 86/521 (16%)
Query: 78 RTYSSVIGWFCNLNKIDSAHTLLSEMI--AK--GFSPSVVTYNSLVFAYCRRDSVDKAVG 133
R +I + N A L+S+++ AK GF + +N L+ AY + D AV
Sbjct: 125 RASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVD 184
Query: 134 ILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 193
I+ M E + P NR +S V G+ D T LM A
Sbjct: 185 IVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASL 244
Query: 194 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM---------- 243
E++ +EA ++ + G PD L Y+ + ACC + A L EM
Sbjct: 245 REEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQ 304
Query: 244 ----------IHKGFLPDFVT--------GFSPAIVTYNALIHGLCFLDRVEEALEILRG 285
+ +G + D + G S +V +LI G C + + AL +
Sbjct: 305 ETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDK 364
Query: 286 MPEMGLSPNAVSYSTVISGFCQIGELGKAYE------------------------LKIET 321
M + G SPN+V++S +I F + GE+ KA E LK +
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 322 EDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 381
++A+ DE S L+ +++++ +G A +L M G + V+
Sbjct: 425 HEEALKLFDE----SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVS 480
Query: 382 YSVLINGLHKKARTREAKRDLLYIASDGFLS---MPSYTVYDILLENC-SNSEFKSLVEL 437
Y+ ++ G R+ DL I L P+ Y IL++ C N + ++ +E+
Sbjct: 481 YNNVMLG-----HCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 438 VKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLL----IFEHCRSHN------ 487
V + ++ + + T+++ K +K + N++ + C S+N
Sbjct: 536 VNHMTSSNIEVN-GVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF 594
Query: 488 -----VHKAYNMYMEMVHYGHAPHMFSVLALISAL-DDDRM 522
+ A Y EM G +P++ + +L++ L ++RM
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRM 635
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 129/528 (24%), Positives = 211/528 (39%), Gaps = 100/528 (18%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ R+ EA +M E ++ Y+++I + + K D A++LL AKG PS
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V+ YN ++ + VD+A+ + M ++ +P++ +YN +I C
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRD 401
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
G+FP+ T + +++ LC Q+L EA +F EM +PDE+T+ L++ VG
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG 461
Query: 232 EFTKAFHLHD-----------------------------------EMIHKGFLPD----- 251
A+ +++ +MI++ PD
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521
Query: 252 ------FVTG----------------FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 289
F G F P +Y+ LIHGL E E+ M E
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 290 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 349
G + +Y+ VI GFC+ G++ KAY+L E + K + TY S++D L+ D
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG-FEPTVVTYGSVIDGLAKIDRLDE 640
Query: 350 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 409
L E + ++L+ V YS LI+G K R EA L + G
Sbjct: 641 AY--MLFEEAKSKRIELN-----------VVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 410 FLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENK 469
P+ ++ LL+ LVK + ++A +M LK +
Sbjct: 688 L--TPNLYTWNSLLD-----------ALVKAEEI----NEALVCFQSMKELKCTPNQVT- 729
Query: 470 TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
Y +LI C+ +KA+ + EM G P S +IS L
Sbjct: 730 -----YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 137/294 (46%), Gaps = 9/294 (3%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L + G E ++ MK +G LD R Y+ VI FC K++ A+ LL EM KGF P+
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VVTY S++ + D +D+A + + + +V Y+ +I F
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ KG+ P+ T++SL++AL + ++EA F+ M +P+++TY L+N C V
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+F KAF EM + G P+ ++Y +I GL + EA + G
Sbjct: 742 KFNKAFVFWQEMQKQ--------GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 345
P++ Y+ +I G A+ L ET + + + T L+D+L D
Sbjct: 794 VPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL-PIHNKTCVVLLDTLHKND 846
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 169/400 (42%), Gaps = 33/400 (8%)
Query: 51 RLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 110
RLC+ ++ EA M E M K DE T+ S+I + ++D A+ + +M+
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
+ + Y SL+ + + I + M + SPD+ N +
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
+ PDA +YS L+ L +E ++LF M G D Y +++ C
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
G+ KA+ L +EM KGF P +VTY ++I GL +DR++EA +
Sbjct: 601 GKVNKAYQLLEEMKTKGF--------EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 291 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED----- 345
+ N V YS++I GF ++G + +AY + E K + + T++SL+D+L +
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT-PNLYTWNSLLDALVKAEEINEA 711
Query: 346 -----------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 388
TY ++N +A +M + G S ++Y+ +I+G
Sbjct: 712 LVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771
Query: 389 LHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSN 428
L K EA ++G +P Y+ ++E SN
Sbjct: 772 LAKAGNIAEAGALFDRFKANG--GVPDSACYNAMIEGLSN 809
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 196/476 (41%), Gaps = 53/476 (11%)
Query: 46 FQSLKR-LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI 104
F +L R +EGR+ A +L+ MK L D Y+ I F + K+D A E+
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 105 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX 164
A G P VTY S++ C+ + +D+AV + + + P +YN +I +
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325
Query: 165 XXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLL 224
KG P Y+ ++ L ++ EA +F EM + +P+ TY L+
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILI 384
Query: 225 NACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 284
+ C G+ AF L D M G P+ + T N ++ LC +++EA +
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPN--------VRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 285 GMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYE 344
M +P+ +++ ++I G ++G + AY++ Y+ ++DS
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV----------------YEKMLDSDCRT 480
Query: 345 DT--YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL 402
++ Y+S++ ++ G + ++ DM + ++ + K + +
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 403 LYIASDGFLSMPSYTVYDILLENCSNSEFKS-LVELVKDYSMRDLSDDAATAHTTMLHLK 461
I + F+ P Y IL+ + F + EL YSM++ +L
Sbjct: 541 EEIKARRFV--PDARSYSILIHGLIKAGFANETYELF--YSMKE--------QGCVL--- 585
Query: 462 NKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
D YN++I C+ V+KAY + EM G P + + ++I L
Sbjct: 586 ---------DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 179/456 (39%), Gaps = 65/456 (14%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
+Y+S++ D+ +L EM GF PSV T +V + + + + +++ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
+ P +Y +I F + G P +++L+ E R+
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 258
A L EM + D + Y +++ VG+ A+ E+ G PD
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD------- 272
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL- 317
VTY ++I LC +R++EA+E+ + + P +Y+T+I G+ G+ +AY L
Sbjct: 273 -EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
Query: 318 -----------------------KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDY 354
K+ D+A+ +E D+ +LS TY+ +++
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLS---TYNILIDML 387
Query: 355 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMP 414
G + A +L M + G + +++++ L K + EA +M
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA------------CAMF 435
Query: 415 SYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGM 474
Y + C+ E + L+ DDA + ML D + +T+ +
Sbjct: 436 EEMDYKV----CTPDEI-TFCSLIDGLGKVGRVDDAYKVYEKML------DSDCRTNSIV 484
Query: 475 YNLLI---FEHCRSHNVHKAYNMYMEMVHYGHAPHM 507
Y LI F H R + HK +Y +M++ +P +
Sbjct: 485 YTSLIKNFFNHGRKEDGHK---IYKDMINQNCSPDL 517
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 147/374 (39%), Gaps = 55/374 (14%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
G P T ++ +L E +D+ + M + P YT L+ A V
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVN----- 182
Query: 237 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAV 296
H +M+ F G+ P + + LI G RV+ AL +L M L + V
Sbjct: 183 ---HSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 297 SYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLA 356
Y+ I F ++G++ A++ E E + DE TY S++ L +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLK-PDEVTYTSMIGVLCKAN----------- 287
Query: 357 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 416
+ A+++ + ++ + AY+ +I G + EA L + G S+PS
Sbjct: 288 --RLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG--SIPSV 343
Query: 417 TVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYN 476
Y+ +L C K + E +K + ++ DAA +T YN
Sbjct: 344 IAYNCIL-TCLRKMGK-VDEALKVFE--EMKKDAAPNLST------------------YN 381
Query: 477 LLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDR-------MYNEMSWV 529
+LI CR+ + A+ + M G P++ +V ++ L + M+ EM +
Sbjct: 382 ILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441
Query: 530 I--NNTLRSCNLSD 541
+ + + C+L D
Sbjct: 442 VCTPDEITFCSLID 455
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 27/161 (16%)
Query: 13 KMALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIP------------- 59
++ LNV IY+ +I GF ++ EA+ L+ L ++G P
Sbjct: 652 RIELNVVIYSSLIDGFGKVG--------RIDEAYLILEELMQKGLTPNLYTWNSLLDALV 703
Query: 60 EAEQMLEVMKC----KGLFL--DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
+AE++ E + C K L ++ TY +I C + K + A EM +G PS +
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI 154
+Y +++ + ++ +A + G PD YN +I
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 187/446 (41%), Gaps = 76/446 (17%)
Query: 4 LRASFTAALKMALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQ 63
L+ AAL + + IY+G+I G T L LC+ G I +A+
Sbjct: 133 LQGKLDAALWLRKKM-IYSGVIPGLITHN--------------HLLNGLCKAGYIEKADG 177
Query: 64 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 123
++ M+ G + +Y+++I C++N +D A L + M G P+ VT N +V A C
Sbjct: 178 LVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALC 237
Query: 124 RRD---------------------------------------SVDKAVGILRAMAERGLS 144
++ +V +A+ + + M+++ +
Sbjct: 238 QKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVP 297
Query: 145 PDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDL 204
D YN +I C V +G+ PD TY++L+ ALC E + EA DL
Sbjct: 298 ADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Query: 205 FREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYN 264
M GGV+PD+++Y ++ C+ G+ +A M+ LP+ ++ +N
Sbjct: 358 HGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPE--------VLLWN 409
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
+I G AL +L M G+ PN + + +I G+ + G L A+ +K E
Sbjct: 410 VVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRST 469
Query: 325 AIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 384
I DT TY+ ++ G+++ A QL +M R G + Y+
Sbjct: 470 KI---HPDT-----------TTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTE 515
Query: 385 LINGLHKKARTREAKRDLLYIASDGF 410
L+ GL K R ++A+ L I + G
Sbjct: 516 LVRGLCWKGRLKKAESLLSRIQATGI 541
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 128/297 (43%), Gaps = 43/297 (14%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
+ G + +A ++ + M K + D Y+ +I C+ + +A+ + +M+ +G +P V
Sbjct: 277 KNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVF 336
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX----------- 162
TYN+L+ A C+ D+A + M G++PD SY +I C
Sbjct: 337 TYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSM 396
Query: 163 ------------------------XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
+ G+ P+ T ++L+ RL
Sbjct: 397 LKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRL 456
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 258
+A+ + EM + PD TY LL A C +G AF L+DEM+ +G PD
Sbjct: 457 IDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD------- 509
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
I+TY L+ GLC+ R+++A +L + G++ + V + + + ++ G+AY
Sbjct: 510 -IITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY 565
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 189/456 (41%), Gaps = 77/456 (16%)
Query: 80 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 139
+SS++ C K+D+A L +MI G P ++T+N L+ C+ ++KA G++R M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 140 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 199
E G S P+ +Y++L++ LC +
Sbjct: 184 EMGPS-----------------------------------PNCVSYNTLIKGLCSVNNVD 208
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACC---LVGEFTKAFHLHDEMIHKGFLPDFVTGF 256
+A LF M + G+ P+ +T +++A C ++G K L +E++ D
Sbjct: 209 KALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKK--LLEEIL------DSSQAN 260
Query: 257 SPAIVTYNALIHGLCFLD-RVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
+P + ++ CF + V +ALE+ + M + + ++V Y+ +I G C G + AY
Sbjct: 261 APLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAY 320
Query: 316 ELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 375
+ + + + D + TY+++++ EG A L M G
Sbjct: 321 GFMCDMVKRGV---NPDVF-----------TYNTLISALCKEGKFDEACDLHGTMQNGGV 366
Query: 376 LSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN----CSNSEF 431
++Y V+I GL A ++ +P +++++++ S
Sbjct: 367 APDQISYKVIIQGLCIHGDVNRANE--FLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSA 424
Query: 432 KSLVELVKDYSMR-DLSDDAATAHTTM--------LHLKNKTDGEN-KTDGGMYNLLIFE 481
S++ L+ Y ++ ++ + A H + +KN+ D YNLL+
Sbjct: 425 LSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGA 484
Query: 482 HCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
C ++ A+ +Y EM+ G P + + L+ L
Sbjct: 485 ACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGL 520
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 103/245 (42%), Gaps = 11/245 (4%)
Query: 20 IYNGMIRGFATAAGK-------SDSESKKVGE---AFQSL-KRLCREGRIPEAEQMLEVM 68
+YN +IRG ++ D + V + +L LC+EG+ EA + M
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Query: 69 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 128
+ G+ D+ +Y +I C ++ A+ L M+ P V+ +N ++ Y R
Sbjct: 362 QNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDT 421
Query: 129 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 188
A+ +L M G+ P+V + N +I + I PD TY+ L
Sbjct: 422 SSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLL 481
Query: 189 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 248
+ A C L AF L+ EMLR G PD +TYT L+ C G KA L + G
Sbjct: 482 LGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
Query: 249 LPDFV 253
D V
Sbjct: 542 TIDHV 546
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 125/309 (40%), Gaps = 82/309 (26%)
Query: 220 YTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEA 279
++ ++ CL G+ A L +MI+ G +P ++T+N L++GLC +E+A
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIP--------GLITHNHLLNGLCKAGYIEKA 175
Query: 280 LEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMD 339
++R M EMG SPN VS
Sbjct: 176 DGLVREMREMGPSPNCVS------------------------------------------ 193
Query: 340 SLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 399
Y++++ + N+ +AL L + M++ G + V +++++ L +K
Sbjct: 194 -------YNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 400 RDLLY-IASDGFLSMP-SYTVYDILLENC-SNSEFKSLVELVKDYSMRDLSDDAATAHTT 456
+ LL I + P + IL+++C N +E+ K+ S +++ D+
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV----- 301
Query: 457 MLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA 516
+YN++I C S N+ AY +MV G P +F+ LISA
Sbjct: 302 -----------------VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISA 344
Query: 517 LDDDRMYNE 525
L + ++E
Sbjct: 345 LCKEGKFDE 353
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 8/240 (3%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+ RLC++G A+ + M KG+F + TY+ +I FC+ + A LL MI K
Sbjct: 17 VDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQI 76
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
+P +VT+++L+ A+ + V +A I + M + P +YN +I FC
Sbjct: 77 NPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKR 136
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
KG PD T+S+L+ C +R+ ++F EM R G+ + +TYT L++ C
Sbjct: 137 MLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 196
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
VG+ A L +EMI G PD+ +T++ ++ GLC + +A IL + +
Sbjct: 197 QVGDLDAAQDLLNEMISCGVAPDY--------ITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 108/206 (52%), Gaps = 8/206 (3%)
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VV ++V C+ + A + M E+G+ P+V +YN +I FC
Sbjct: 10 VVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 69
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
++K I PD T+S+L+ A E+++SEA ++++EMLR + P +TY +++ C
Sbjct: 70 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQD 129
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
A + D M KG PD +VT++ LI+G C RV+ +EI M G+
Sbjct: 130 RVDDAKRMLDSMASKGCSPD--------VVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 181
Query: 292 SPNAVSYSTVISGFCQIGELGKAYEL 317
N V+Y+T+I GFCQ+G+L A +L
Sbjct: 182 VANTVTYTTLIHGFCQVGDLDAAQDL 207
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 117/237 (49%), Gaps = 8/237 (3%)
Query: 81 SSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAE 140
++++ C +A L +EM KG P+V+TYN ++ ++C A +LR M E
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 141 RGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSE 200
+ ++PD+ +++ +I+ F + IFP TY+S+++ C + R+ +
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 201 AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAI 260
A + M G SPD +T++ L+N C + EM +G + +
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN--------T 185
Query: 261 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
VTY LIHG C + ++ A ++L M G++P+ +++ +++G C EL KA+ +
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 22/261 (8%)
Query: 138 MAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQR 197
M + + DV ++ + C +KGIFP+ TY+ ++++ C R
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 198 LSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS 257
S+A L R M+ ++PD +T++ L+NA + ++A ++ EM+ P
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFP------- 113
Query: 258 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
+TYN++I G C DRV++A +L M G SP+ V++ST+I+G+C+ + E+
Sbjct: 114 -TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 172
Query: 318 KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLS 377
E + I ++ TY+++++ + G++ A L ++M G
Sbjct: 173 FCEMHRRGI--------------VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 218
Query: 378 SYVAYSVLINGLHKKARTREA 398
Y+ + ++ GL K R+A
Sbjct: 219 DYITFHCMLAGLCSKKELRKA 239
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 104/259 (40%), Gaps = 39/259 (15%)
Query: 260 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKI 319
+V A++ LC A + M E G+ PN ++Y+ +I FC G A +L
Sbjct: 10 VVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 69
Query: 320 ETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 379
+K I + D T+S+++N ++ E + A ++ +M R +
Sbjct: 70 HMIEKQI---NPDIV-----------TFSALINAFVKERKVSEAEEIYKEMLRWSIFPTT 115
Query: 380 VAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELV 438
+ Y+ +I+G K+ R +AKR L +AS G P + L+ C + +E+
Sbjct: 116 ITYNSMIDGFCKQDRVDDAKRMLDSMASKG--CSPDVVTFSTLINGYCKAKRVDNGMEIF 173
Query: 439 KDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 498
+ R + + T Y LI C+ ++ A ++ EM
Sbjct: 174 CEMHRRGIVANTVT----------------------YTTLIHGFCQVGDLDAAQDLLNEM 211
Query: 499 VHYGHAPHMFSVLALISAL 517
+ G AP + +++ L
Sbjct: 212 ISCGVAPDYITFHCMLAGL 230
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 152/328 (46%), Gaps = 46/328 (14%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDER------TYSSVIGWFCNLNKIDSAHTLLSEMIA 105
LC+ GR+ EAE++L MK L+ER TY+ +I +C K+++A ++S M
Sbjct: 380 LCKVGRLKEAEELLVRMK-----LEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 106 KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 165
P+VVT N++V CR ++ AV M + G+ +V +Y +I C
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 166 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
++ G PDA Y +L+ LC +R +A + ++ GG S D L Y L+
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSP 258
C K + + +M +G PD +T G P
Sbjct: 555 LFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGL----SPNAVSYSTVISGFCQIGELGKA 314
+ TY A+I C + ++EAL++ + +MGL +PN V Y+ +I+ F ++G G+A
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFK---DMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLS 342
LK E + K + + +TY++L L+
Sbjct: 672 LSLKEEMKMKMV-RPNVETYNALFKCLN 698
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 13/253 (5%)
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
E+MLE G D + Y ++I C + + A ++ ++ GFS ++ YN L+
Sbjct: 500 EKMLEA----GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGL 555
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 181
+C +++ +K +L M + G PD +YN +IS F + G+ P
Sbjct: 556 FCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT 615
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREM-LRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
TY ++++A C L EA LF++M L V+P+ + Y L+NA +G F +A L
Sbjct: 616 VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLK 675
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
+EM K P+ + TYNAL L + E L+++ M E PN ++
Sbjct: 676 EEMKMKMVRPN--------VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEI 727
Query: 301 VISGFCQIGELGK 313
++ EL K
Sbjct: 728 LMERLSGSDELVK 740
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 161/407 (39%), Gaps = 78/407 (19%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ R A +L + L+ +++++ I + L+ +M P
Sbjct: 269 LCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPD 328
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMA-------------------------------- 139
VVT L+ C+ VD+A+ + M
Sbjct: 329 VVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388
Query: 140 ----------ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLM 189
E +P+ +YN +I +C + I P+ T ++++
Sbjct: 389 AEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
Query: 190 EALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFL 249
+C L+ A F +M + GV + +TY L++ACC V KA + +++M+
Sbjct: 449 GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE---- 504
Query: 250 PDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG 309
G SP Y ALI GLC + R +A+ ++ + E G S + ++Y+ +I FC
Sbjct: 505 ----AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN 560
Query: 310 ELGKAYEL--KIETEDKAIWWLDEDTYDSLM-------DSLSYE---------------D 345
K YE+ +E E K D TY++L+ D S E
Sbjct: 561 NTEKVYEMLTDMEKEGKKP---DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 346 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLS-SYVAYSVLINGLHK 391
TY +V++ Y + G + AL+L DM ++ + V Y++LIN K
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 173/430 (40%), Gaps = 48/430 (11%)
Query: 93 IDSAHTLLSEMIAKG--FSPSVVTYNSLVFAYC--RRDSVDKAVGILRAMAERGLSPDVD 148
+D A +L EM+ K F P+ +T + ++ R + +K + ++ + G+SP+
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSV 260
Query: 149 SYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 208
R IS C + +A +++L+ L +S DL +M
Sbjct: 261 WLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 209 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 268
+ PD +T L+N C +A + ++M +G D + +N LI
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKM--RGKRTDDGNVIKADSIHFNTLID 378
Query: 269 GLCFLDRVEEALEILRGMP-EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIW 327
GLC + R++EA E+L M E +PNAV+Y+ +I G+C+ G K+ET + +
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAG--------KLETAKEVVS 430
Query: 328 WLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 387
+ ED + T ++++ + A+ DM ++G + V Y LI+
Sbjct: 431 RMKEDEIKPNVV------TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIH 484
Query: 388 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSM--RD 445
+ +A +Y Y+ +LE + + K L+ RD
Sbjct: 485 ACCSVSNVEKA----MYW-------------YEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 446 LSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 505
H + ++ +G D YN+LI C +N K Y M +M G P
Sbjct: 528 --------HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKP 579
Query: 506 HMFSVLALIS 515
+ LIS
Sbjct: 580 DSITYNTLIS 589
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 152/328 (46%), Gaps = 46/328 (14%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDER------TYSSVIGWFCNLNKIDSAHTLLSEMIA 105
LC+ GR+ EAE++L MK L+ER TY+ +I +C K+++A ++S M
Sbjct: 380 LCKVGRLKEAEELLVRMK-----LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 106 KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 165
P+VVT N++V CR ++ AV M + G+ +V +Y +I C
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 166 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
++ G PDA Y +L+ LC +R +A + ++ GG S D L Y L+
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSP 258
C K + + +M +G PD +T G P
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGL----SPNAVSYSTVISGFCQIGELGKA 314
+ TY A+I C + ++EAL++ + +MGL +PN V Y+ +I+ F ++G G+A
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFK---DMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLS 342
LK E + K + + +TY++L L+
Sbjct: 672 LSLKEEMKMKMV-RPNVETYNALFKCLN 698
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 160/407 (39%), Gaps = 78/407 (19%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ R A +L + L+ +++++ I + L+ +M P
Sbjct: 269 LCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPD 328
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMA-------------------------------- 139
VVT L+ C+ VD+A+ + M
Sbjct: 329 VVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388
Query: 140 ----------ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLM 189
E P+ +YN +I +C + I P+ T ++++
Sbjct: 389 AEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
Query: 190 EALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFL 249
+C L+ A F +M + GV + +TY L++ACC V KA + +++M+
Sbjct: 449 GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE---- 504
Query: 250 PDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG 309
G SP Y ALI GLC + R +A+ ++ + E G S + ++Y+ +I FC
Sbjct: 505 ----AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN 560
Query: 310 ELGKAYEL--KIETEDKAIWWLDEDTYDSLM-------DSLSYE---------------D 345
K YE+ +E E K D TY++L+ D S E
Sbjct: 561 NAEKVYEMLTDMEKEGKKP---DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 346 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLS-SYVAYSVLINGLHK 391
TY +V++ Y + G + AL+L DM ++ + V Y++LIN K
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 170/428 (39%), Gaps = 44/428 (10%)
Query: 93 IDSAHTLLSEMIAKG--FSPSVVTYNSLVFAYCRRD--SVDKAVGILRAMAERGLSPDVD 148
+D A +L EM+ K F P+ +T + ++ + + +K + ++ + G+SP+
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 149 SYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 208
R IS C + +A +++L+ L +S DL +M
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 209 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 268
+ PD +T L+N C +A + ++M +G D + +N LI
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLID 378
Query: 269 GLCFLDRVEEALEILRGMP-EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIW 327
GLC + R++EA E+L M E PNAV+Y+ +I G+C+ G K+ET + +
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAG--------KLETAKEVVS 430
Query: 328 WLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 387
+ ED + T ++++ + A+ DM ++G + V Y LI+
Sbjct: 431 RMKEDEIKPNVV------TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIH 484
Query: 388 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLS 447
+ +A +Y Y+ +LE + + K L+
Sbjct: 485 ACCSVSNVEKA----MYW-------------YEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 448 DDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM 507
DA ++ +G D YN+LI C +N K Y M +M G P
Sbjct: 528 HDAIRV------VEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 508 FSVLALIS 515
+ LIS
Sbjct: 582 ITYNTLIS 589
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 152/328 (46%), Gaps = 46/328 (14%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDER------TYSSVIGWFCNLNKIDSAHTLLSEMIA 105
LC+ GR+ EAE++L MK L+ER TY+ +I +C K+++A ++S M
Sbjct: 380 LCKVGRLKEAEELLVRMK-----LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 106 KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 165
P+VVT N++V CR ++ AV M + G+ +V +Y +I C
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 166 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
++ G PDA Y +L+ LC +R +A + ++ GG S D L Y L+
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSP 258
C K + + +M +G PD +T G P
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGL----SPNAVSYSTVISGFCQIGELGKA 314
+ TY A+I C + ++EAL++ + +MGL +PN V Y+ +I+ F ++G G+A
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFK---DMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLS 342
LK E + K + + +TY++L L+
Sbjct: 672 LSLKEEMKMKMV-RPNVETYNALFKCLN 698
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 13/253 (5%)
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
E+MLE G D + Y ++I C + + A ++ ++ GFS ++ YN L+
Sbjct: 500 EKMLEA----GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGL 555
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 181
+C +++ +K +L M + G PD +YN +IS F + G+ P
Sbjct: 556 FCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT 615
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREM-LRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
TY ++++A C L EA LF++M L V+P+ + Y L+NA +G F +A L
Sbjct: 616 VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLK 675
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
+EM K P+ + TYNAL L + E L+++ M E PN ++
Sbjct: 676 EEMKMKMVRPN--------VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEI 727
Query: 301 VISGFCQIGELGK 313
++ EL K
Sbjct: 728 LMERLSGSDELVK 740
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 160/407 (39%), Gaps = 78/407 (19%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ R A +L + L+ +++++ I + L+ +M P
Sbjct: 269 LCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPD 328
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMA-------------------------------- 139
VVT L+ C+ VD+A+ + M
Sbjct: 329 VVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388
Query: 140 ----------ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLM 189
E P+ +YN +I +C + I P+ T ++++
Sbjct: 389 AEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
Query: 190 EALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFL 249
+C L+ A F +M + GV + +TY L++ACC V KA + +++M+
Sbjct: 449 GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE---- 504
Query: 250 PDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG 309
G SP Y ALI GLC + R +A+ ++ + E G S + ++Y+ +I FC
Sbjct: 505 ----AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN 560
Query: 310 ELGKAYEL--KIETEDKAIWWLDEDTYDSLM-------DSLSYE---------------D 345
K YE+ +E E K D TY++L+ D S E
Sbjct: 561 NAEKVYEMLTDMEKEGKKP---DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 346 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLS-SYVAYSVLINGLHK 391
TY +V++ Y + G + AL+L DM ++ + V Y++LIN K
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 172/430 (40%), Gaps = 48/430 (11%)
Query: 93 IDSAHTLLSEMIAKG--FSPSVVTYNSLVFAYCRRD--SVDKAVGILRAMAERGLSPDVD 148
+D A +L EM+ K F P+ +T + ++ + + +K + ++ + G+SP+
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 149 SYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 208
R IS C + +A +++L+ L +S DL +M
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 209 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 268
+ PD +T L+N C +A + ++M +G D + +N LI
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLID 378
Query: 269 GLCFLDRVEEALEILRGMP-EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIW 327
GLC + R++EA E+L M E PNAV+Y+ +I G+C+ G K+ET + +
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAG--------KLETAKEVVS 430
Query: 328 WLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 387
+ ED + T ++++ + A+ DM ++G + V Y LI+
Sbjct: 431 RMKEDEIKPNVV------TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIH 484
Query: 388 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSM--RD 445
+ +A +Y Y+ +LE + + K L+ RD
Sbjct: 485 ACCSVSNVEKA----MYW-------------YEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 446 LSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 505
H + ++ +G D YN+LI C +N K Y M +M G P
Sbjct: 528 --------HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 506 HMFSVLALIS 515
+ LIS
Sbjct: 580 DSITYNTLIS 589
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 154/324 (47%), Gaps = 23/324 (7%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
D +T++ +I C + K + A LL M G P +VTYN+L+ +C+ + ++KA +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 136 RAMAERGL-SPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 194
+ + + SPDV +Y +IS +C + GI+P T++ L++
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 195 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 254
+ A ++ +M+ G PD +T+T L++ C VG+ ++ F L +EM +G P+
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN--- 381
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
TY+ LI+ LC +R+ +A E+L + + P Y+ VI GFC+ G++ +A
Sbjct: 382 -----AFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 374
+ E E K D + T++ ++ + +G M A+ + H M G
Sbjct: 437 NVIVEEMEKKKC------KPDKI--------TFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 375 YLSSYVAYSVLINGLHKKARTREA 398
+ S L++ L K +EA
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEA 506
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 137/297 (46%), Gaps = 28/297 (9%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
++ LC G+ +A ++L VM G D TY+++I FC N+++ A + ++ +
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 109 -SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
SP VVTY S++ YC+ + +A +L M G+ P ++N ++ +
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
+ G FPD T++SL++ C ++S+ F L+ EM G+ P+ TY+ L+NA
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPD------FVTGF---------------------SPAI 260
C KA L ++ K +P + GF P
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 261 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
+T+ LI G C R+ EA+ I M +G SP+ ++ S+++S + G +AY L
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 151/383 (39%), Gaps = 56/383 (14%)
Query: 50 KRLCREGRIPEAEQMLEVMKCKGLFLDER------------------------------- 78
+ LC+ G A QM E MK G+ + R
Sbjct: 111 RSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGC 170
Query: 79 --TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 136
+S++ L++++ A L E + T+N L+ C +KA+ +L
Sbjct: 171 CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLG 230
Query: 137 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF-PDAATYSSLMEALCVE 195
M+ G PD+ +YN +I FC + PD TY+S++ C
Sbjct: 231 VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKA 290
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
++ EA L +MLR G+ P +T+ L++ GE A + +MI G PD
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD---- 346
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
+VT+ +LI G C + +V + + M G+ PNA +YS +I+ C L KA
Sbjct: 347 ----VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 316 ELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 375
EL + K D + Y+ V++ + G + A + +M +
Sbjct: 403 ELLGQLASK--------------DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 376 LSSYVAYSVLINGLHKKARTREA 398
+ +++LI G K R EA
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEA 471
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 185/439 (42%), Gaps = 59/439 (13%)
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
S TYN L + C+ D A + M G+SP+ ++S F
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
+ + +SL+ L R+ +A LF E LR D T+ L+ C V
Sbjct: 162 LQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGV 219
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
G+ KA L M GF G P IVTYN LI G C + + +A E+ + +
Sbjct: 220 GKAEKALELLGVM--SGF------GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 291 L-SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDS-------LS 342
+ SP+ V+Y+++ISG+C+ G++ +A L + I+ + T++ L+D L+
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNV-TFNVLVDGYAKAGEMLT 330
Query: 343 YED---------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 387
E+ T++S+++ Y G + + +L +M+ G + YS+LIN
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 388 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDL 446
L + R +A+ L +AS + P +Y+ +++ C + +V++ +
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQP--FMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 447 SDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPH 506
D T + +LI HC + +A +++ +MV G +P
Sbjct: 449 KPDKIT----------------------FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
Query: 507 MFSVLALISALDDDRMYNE 525
+V +L+S L M E
Sbjct: 487 KITVSSLLSCLLKAGMAKE 505
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 22/251 (8%)
Query: 21 YNGMIRGFATAAGKSDSESKKVGEAFQSLKR-----------------LCREGRIPEAEQ 63
YN +I+GF + +E K E F+ +K C+ G++ EA
Sbjct: 244 YNTLIQGFCKS-----NELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 64 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 123
+L+ M G++ T++ ++ + ++ +A + +MI+ G P VVT+ SL+ YC
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 124 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 183
R V + + M RG+ P+ +Y+ +I+ C K I P
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPF 418
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
Y+ +++ C +++EA + EM + PD++T+T L+ C+ G +A + +M
Sbjct: 419 MYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Query: 244 IHKGFLPDFVT 254
+ G PD +T
Sbjct: 479 VAIGCSPDKIT 489
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 1/194 (0%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
+ G + AE++ M G F D T++S+I +C + ++ L EM A+G P+
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
TY+ L+ A C + + KA +L +A + + P YN VI FC
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
K PD T++ L+ C++ R+ EA +F +M+ G SPD++T + LL+ G
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMA 503
Query: 234 TKAFHLHDEMIHKG 247
+A+HL +++ KG
Sbjct: 504 KEAYHL-NQIARKG 516
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 154/324 (47%), Gaps = 23/324 (7%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
D +T++ +I C + K + A LL M G P +VTYN+L+ +C+ + ++KA +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 136 RAMAERGL-SPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 194
+ + + SPDV +Y +IS +C + GI+P T++ L++
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 195 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 254
+ A ++ +M+ G PD +T+T L++ C VG+ ++ F L +EM +G P+
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN--- 381
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
TY+ LI+ LC +R+ +A E+L + + P Y+ VI GFC+ G++ +A
Sbjct: 382 -----AFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 374
+ E E K D + T++ ++ + +G M A+ + H M G
Sbjct: 437 NVIVEEMEKKKC------KPDKI--------TFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 375 YLSSYVAYSVLINGLHKKARTREA 398
+ S L++ L K +EA
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEA 506
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 137/297 (46%), Gaps = 28/297 (9%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
++ LC G+ +A ++L VM G D TY+++I FC N+++ A + ++ +
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 109 -SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
SP VVTY S++ YC+ + +A +L M G+ P ++N ++ +
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
+ G FPD T++SL++ C ++S+ F L+ EM G+ P+ TY+ L+NA
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPD------FVTGF---------------------SPAI 260
C KA L ++ K +P + GF P
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 261 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
+T+ LI G C R+ EA+ I M +G SP+ ++ S+++S + G +AY L
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 151/383 (39%), Gaps = 56/383 (14%)
Query: 50 KRLCREGRIPEAEQMLEVMKCKGLFLDER------------------------------- 78
+ LC+ G A QM E MK G+ + R
Sbjct: 111 RSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGC 170
Query: 79 --TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 136
+S++ L++++ A L E + T+N L+ C +KA+ +L
Sbjct: 171 CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLG 230
Query: 137 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF-PDAATYSSLMEALCVE 195
M+ G PD+ +YN +I FC + PD TY+S++ C
Sbjct: 231 VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKA 290
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
++ EA L +MLR G+ P +T+ L++ GE A + +MI G PD
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD---- 346
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
+VT+ +LI G C + +V + + M G+ PNA +YS +I+ C L KA
Sbjct: 347 ----VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 316 ELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 375
EL + K D + Y+ V++ + G + A + +M +
Sbjct: 403 ELLGQLASK--------------DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 376 LSSYVAYSVLINGLHKKARTREA 398
+ +++LI G K R EA
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEA 471
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 185/439 (42%), Gaps = 59/439 (13%)
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
S TYN L + C+ D A + M G+SP+ ++S F
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
+ + +SL+ L R+ +A LF E LR D T+ L+ C V
Sbjct: 162 LQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGV 219
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
G+ KA L M GF G P IVTYN LI G C + + +A E+ + +
Sbjct: 220 GKAEKALELLGVM--SGF------GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 291 L-SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDS-------LS 342
+ SP+ V+Y+++ISG+C+ G++ +A L + I+ + T++ L+D L+
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNV-TFNVLVDGYAKAGEMLT 330
Query: 343 YED---------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 387
E+ T++S+++ Y G + + +L +M+ G + YS+LIN
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 388 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDL 446
L + R +A+ L +AS + P +Y+ +++ C + +V++ +
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQP--FMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 447 SDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPH 506
D T + +LI HC + +A +++ +MV G +P
Sbjct: 449 KPDKIT----------------------FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
Query: 507 MFSVLALISALDDDRMYNE 525
+V +L+S L M E
Sbjct: 487 KITVSSLLSCLLKAGMAKE 505
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 22/251 (8%)
Query: 21 YNGMIRGFATAAGKSDSESKKVGEAFQSLKR-----------------LCREGRIPEAEQ 63
YN +I+GF + +E K E F+ +K C+ G++ EA
Sbjct: 244 YNTLIQGFCKS-----NELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 64 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 123
+L+ M G++ T++ ++ + ++ +A + +MI+ G P VVT+ SL+ YC
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 124 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 183
R V + + M RG+ P+ +Y+ +I+ C K I P
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPF 418
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
Y+ +++ C +++EA + EM + PD++T+T L+ C+ G +A + +M
Sbjct: 419 MYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Query: 244 IHKGFLPDFVT 254
+ G PD +T
Sbjct: 479 VAIGCSPDKIT 489
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 1/194 (0%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
+ G + AE++ M G F D T++S+I +C + ++ L EM A+G P+
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
TY+ L+ A C + + KA +L +A + + P YN VI FC
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
K PD T++ L+ C++ R+ EA +F +M+ G SPD++T + LL+ G
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMA 503
Query: 234 TKAFHLHDEMIHKG 247
+A+HL +++ KG
Sbjct: 504 KEAYHL-NQIARKG 516
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 132/545 (24%), Positives = 233/545 (42%), Gaps = 84/545 (15%)
Query: 51 RLCREGRIPEAEQMLEVMKCKGLF--LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG- 107
R +G + A ++LE+M K + D S+VI FC + K + A + G
Sbjct: 143 RFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGV 202
Query: 108 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
P++VTY +LV A C+ VD+ ++R + + G D Y+ I +
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDAL 262
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
V+KG+ D +YS L++ L E + EA L +M++ GV P+ +TYT ++
Sbjct: 263 MQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGL 322
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPD---FVT------------------------GFSPAI 260
C +G+ +AF L + ++ G D +VT G P+I
Sbjct: 323 CKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSI 382
Query: 261 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIE 320
+TYN +I+GLC RV EA E+ + G+ + ++YST++ + ++ + E++
Sbjct: 383 LTYNTVINGLCMAGRVSEADEVSK-----GVVGDVITYSTLLDSYIKVQNIDAVLEIRRR 437
Query: 321 TEDKAI------------WWLDEDTY---DSLMDSLSYED------TYSSVMNDYLAEGN 359
+ I +L Y D+L ++ D TY++++ Y G
Sbjct: 438 FLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQ 497
Query: 360 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 419
++ AL++ +++ R +S+ V Y+ +I+ L KK A L+ + G L + +T
Sbjct: 498 IEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKG-LYLDIHTSR 555
Query: 420 DILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLI 479
+L +N K ++ LV Y + L+ D GM N I
Sbjct: 556 TLLHSIHANGGDKGILGLV--YGLEQLNSDVCL--------------------GMLNDAI 593
Query: 480 FEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVIN---NTLRS 536
C+ + A +YM M G S + L + +D+ R + V+N TL S
Sbjct: 594 LLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTI-LKTLVDNLRSLDAYLLVVNAGETTLSS 652
Query: 537 CNLSD 541
++ D
Sbjct: 653 MDVID 657
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 164/377 (43%), Gaps = 63/377 (16%)
Query: 63 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK---------------G 107
Q + K + ++ R YS V F NLN+ + A ++ I+K G
Sbjct: 47 QFYSQLDSKQININHRIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHG 106
Query: 108 FS-----------------------PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLS 144
FS PS +T+ SL++ + + +D A+ +L M + ++
Sbjct: 107 FSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVN 166
Query: 145 PDVDSY--NRVISKFCXXXXXXXXXXXXXXXVDKGIF-PDAATYSSLMEALCVEQRLSEA 201
D++ + VIS FC VD G+ P+ TY++L+ ALC ++ E
Sbjct: 167 YPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEV 226
Query: 202 FDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIV 261
DL R + G D + Y+ ++ G A EM+ KG D +V
Sbjct: 227 RDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRD--------VV 278
Query: 262 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIET 321
+Y+ LI GL VEEAL +L M + G+ PN ++Y+ +I G C++G+L +A+ L
Sbjct: 279 SYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRI 338
Query: 322 EDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 381
I +DE Y +L+D + +GN+ RA + DM + G S +
Sbjct: 339 LSVGI-EVDEFLYVTLIDGIC-------------RKGNLNRAFSMLGDMEQRGIQPSILT 384
Query: 382 YSVLINGLHKKARTREA 398
Y+ +INGL R EA
Sbjct: 385 YNTVINGLCMAGRVSEA 401
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/481 (21%), Positives = 197/481 (40%), Gaps = 90/481 (18%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
+CR+G + A ML M+ +G+ TY++VI C ++ A + ++KG
Sbjct: 357 ICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGD 411
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V+TY++L+ +Y + ++D + I R E + D+ N ++ F
Sbjct: 412 VITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYR 471
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ + PD ATY+++++ C ++ EA ++F E+ + VS + Y R+++A C G
Sbjct: 472 AMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKG 530
Query: 232 EFTKAFHLHDEMIHKGFLPDFVT-----------GFSPAIVTYNALIHGL---------- 270
A + E+ KG D T G I+ L++GL
Sbjct: 531 MLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGIL---GLVYGLEQLNSDVCLG 587
Query: 271 ---------CFLDRVEEALEILRGMPEMGL------------------------------ 291
C E A+E+ M GL
Sbjct: 588 MLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGE 647
Query: 292 ----SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 347
S + + Y+ +I+G C+ G L KA L + + + T +++ TY
Sbjct: 648 TTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGV------TLNTI--------TY 693
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 407
+S++N +G + AL+L + G + S V Y +LI+ L K+ +A++ L + S
Sbjct: 694 NSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVS 753
Query: 408 DGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDG 466
G + P+ +Y+ +++ C + + + +V M ++ DA T + + K D
Sbjct: 754 KGLV--PNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDM 811
Query: 467 E 467
E
Sbjct: 812 E 812
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 138/347 (39%), Gaps = 78/347 (22%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K C+ G+I EA +M ++ K Y+ +I C +D+A +L E+ KG
Sbjct: 489 IKGYCKTGQIEEALEMFNELR-KSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGL 547
Query: 109 SPSVVTYNSL-----------------------------------VFAYCRRDSVDKAVG 133
+ T +L + C+R S + A+
Sbjct: 548 YLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIE 607
Query: 134 ILRAMAERGL----------------------------------SPDVDSYNRVISKFCX 159
+ M +GL S DV Y +I+ C
Sbjct: 608 VYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCK 667
Query: 160 XXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELT 219
+G+ + TY+SL+ LC + L EA LF + G+ P E+T
Sbjct: 668 EGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVT 727
Query: 220 YTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEA 279
Y L++ C G F A L D M+ KG +P+ I+ YN+++ G C L + E+A
Sbjct: 728 YGILIDNLCKEGLFLDAEKLLDSMVSKGLVPN--------IIIYNSIVDGYCKLGQTEDA 779
Query: 280 LEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAI 326
+ ++ ++P+A + S++I G+C+ G++ +A + E +DK I
Sbjct: 780 MRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 3/255 (1%)
Query: 32 AGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLN 91
AG++ S V + + LC+EG + +A + K +G+ L+ TY+S+I C
Sbjct: 645 AGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQG 704
Query: 92 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 151
+ A L + G PS VTY L+ C+ A +L +M +GL P++ YN
Sbjct: 705 CLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYN 764
Query: 152 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 211
++ +C + + PDA T SS+++ C + + EA +F E
Sbjct: 765 SIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDK 824
Query: 212 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIV---TYNALIH 268
+S D + L+ C G +A L EM+ + + + + +
Sbjct: 825 NISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLV 884
Query: 269 GLCFLDRVEEALEIL 283
LC RV +A++IL
Sbjct: 885 ELCEQGRVPQAIKIL 899
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Query: 75 LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 134
+D Y+ +I C + A L S ++G + + +TYNSL+ C++ + +A+ +
Sbjct: 653 MDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRL 712
Query: 135 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 194
++ GL P +Y +I C V KG+ P+ Y+S+++ C
Sbjct: 713 FDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 195 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 254
+ +A + + G V+PD T + ++ C G+ +A + E K DF
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFF- 831
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGM 286
GF LI G C R+EEA +LR M
Sbjct: 832 GFL-------FLIKGFCTKGRMEEARGLLREM 856
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 7 SFTAALKMALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSL-------------KRLC 53
SF + + LN YN +I G E+ ++ ++ +++ LC
Sbjct: 679 SFAKSRGVTLNTITYNSLINGLCQQG--CLVEALRLFDSLENIGLVPSEVTYGILIDNLC 736
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
+EG +AE++L+ M KGL + Y+S++ +C L + + A ++S + +P
Sbjct: 737 KEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAF 796
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 158
T +S++ YC++ +++A+ + ++ +S D + +I FC
Sbjct: 797 TVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFC 841
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 148/309 (47%), Gaps = 23/309 (7%)
Query: 94 DSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRV 153
D+ + +M+ G ++ YN LV A + +KA +L M E+G+ PD+ +YN +
Sbjct: 185 DTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTL 244
Query: 154 ISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV 213
IS +C G+ P+ TY+S + E R+ EA LFRE ++ V
Sbjct: 245 ISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDV 303
Query: 214 SPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFL 273
+ + +TYT L++ C + + +A L + M +GF SP +VTYN+++ LC
Sbjct: 304 TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGF--------SPGVVTYNSILRKLCED 355
Query: 274 DRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDT 333
R+ EA +L M + P+ ++ +T+I+ +C+I ++ A ++K + + L D
Sbjct: 356 GRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESG---LKLDM 412
Query: 334 YDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 393
Y +Y ++++ + ++ A + M G+ Y YS L++G + +
Sbjct: 413 Y-----------SYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQN 461
Query: 394 RTREAKRDL 402
+ E + L
Sbjct: 462 KQDEITKLL 470
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 124/262 (47%), Gaps = 10/262 (3%)
Query: 45 AFQSLKRLCREGRIPE-AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 103
+ L C + PE AE++L M+ KG+F D TY+++I +C + A ++ M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 104 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 163
G +P++VTYNS + + R + +A + R + + + V +Y +I +C
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHV-TYTTLIDGYCRMNDI 323
Query: 164 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 223
+G P TY+S++ LC + R+ EA L EM + PD +T L
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 224 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 283
+NA C + + A + +MI G D + +Y ALIHG C + +E A E L
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLD--------MYSYKALIHGFCKVLELENAKEEL 435
Query: 284 RGMPEMGLSPNAVSYSTVISGF 305
M E G SP +YS ++ GF
Sbjct: 436 FSMIEKGFSPGYATYSWLVDGF 457
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 160/385 (41%), Gaps = 30/385 (7%)
Query: 72 GLFLDERTYSSVIGW----FCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 127
G+ D S V W + I+ + + ++ + G P + L+ + ++
Sbjct: 124 GVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRL 183
Query: 128 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 187
D I + M + G+ ++ YN ++ +KG+FPD TY++
Sbjct: 184 TDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNT 243
Query: 188 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 247
L+ C + EA + M R GV+P+ +TY ++ G +A L E
Sbjct: 244 LISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE----- 298
Query: 248 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQ 307
+ D VT VTY LI G C ++ ++EAL + M G SP V+Y++++ C+
Sbjct: 299 -IKDDVTANH---VTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCE 354
Query: 308 IGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLD 367
G + +A L E K I + D T ++++N Y +M A+++
Sbjct: 355 DGRIREANRLLTEMSGKKI---EPDNI-----------TCNTLINAYCKIEDMVSAVKVK 400
Query: 368 HDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCS 427
M G +Y LI+G K AK +L + GF P Y Y L++
Sbjct: 401 KKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF--SPGYATYSWLVDGFY 458
Query: 428 NSEFK-SLVELVKDYSMRDLSDDAA 451
N + + +L++++ R L D A
Sbjct: 459 NQNKQDEITKLLEEFEKRGLCADVA 483
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 112/255 (43%), Gaps = 20/255 (7%)
Query: 14 MALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKR---------------LCREGRI 58
+A N+ YN I GF+ + ++ F+ +K CR I
Sbjct: 269 VAPNIVTYNSFIHGFS-----REGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDI 323
Query: 59 PEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSL 118
EA ++ EVM+ +G TY+S++ C +I A+ LL+EM K P +T N+L
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 119 VFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGI 178
+ AYC+ + + AV + + M E GL D+ SY +I FC ++KG
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443
Query: 179 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 238
P ATYS L++ + + E L E + G+ D Y L+ C + + A
Sbjct: 444 SPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKV 503
Query: 239 LHDEMIHKGFLPDFV 253
L + M KG + D V
Sbjct: 504 LFESMEKKGLVGDSV 518
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 141/346 (40%), Gaps = 39/346 (11%)
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
T L++ L + LS L L GGVS D + + + L+ + KA ++D +
Sbjct: 98 TAHQLLDKLAQRELLSSPLVL--RSLVGGVSEDPEDVSHVFS--WLMIYYAKAGMINDSI 153
Query: 244 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVIS 303
+ F G P + L++ L + +I + M ++G+ N Y+ ++
Sbjct: 154 V--VFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVH 211
Query: 304 GFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 363
+ G+ KA +L E E+K ++ D + TY+++++ Y + A
Sbjct: 212 ACSKSGDPEKAEKLLSEMEEKGVF---PDIF-----------TYNTLISVYCKKSMHFEA 257
Query: 364 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 423
L + M R G + V Y+ I+G ++ R REA R I D ++ Y L+
Sbjct: 258 LSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD---VTANHVTYTTLI 314
Query: 424 EN-CSNSEFKSLVEL------------VKDYS--MRDLSDDAATAHTTMLHLKNKTDGEN 468
+ C ++ + L V Y+ +R L +D L L + +
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRL-LTEMSGKKI 373
Query: 469 KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 514
+ D N LI +C+ ++ A + +M+ G M+S ALI
Sbjct: 374 EPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 156/339 (46%), Gaps = 23/339 (6%)
Query: 59 PEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSL 118
P ++ M+ + +T++ V + + K D A L M G + ++N++
Sbjct: 108 PTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTI 167
Query: 119 VFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGI 178
+ C+ V+KA + RA+ R S D +YN +++ +C V++GI
Sbjct: 168 LDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGI 226
Query: 179 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 238
P+ TY+++++ ++ A++ F EM + D +TYT +++ + GE +A +
Sbjct: 227 NPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARN 286
Query: 239 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSY 298
+ DEMI +G L P++ TYNA+I LC D VE A+ + M G PN +Y
Sbjct: 287 VFDEMIREGVL--------PSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 338
Query: 299 STVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEG 358
+ +I G GE + EL E++ E + TY+ ++ Y
Sbjct: 339 NVLIRGLFHAGEFSRGEELMQRMENEGC----EPNF----------QTYNMMIRYYSECS 384
Query: 359 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTRE 397
+++AL L M L + Y++LI+G+ + R+ +
Sbjct: 385 EVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 125/263 (47%), Gaps = 26/263 (9%)
Query: 178 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 237
I P T++ + E + +A LF M G D ++ +L+ C KA+
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 238 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVS 297
L + + FS VTYN +++G C + R +ALE+L+ M E G++PN +
Sbjct: 182 ELFRALRGR---------FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTT 232
Query: 298 YSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAE 357
Y+T++ GF + G++ A+E +E + + D +D + TY++V++ +
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKR----------DCEIDVV----TYTTVVHGFGVA 278
Query: 358 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 417
G ++RA + +M R+G L S Y+ +I L KK A + G+ P+ T
Sbjct: 279 GEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGY--EPNVT 336
Query: 418 VYDILLENCSNS-EFKSLVELVK 439
Y++L+ ++ EF EL++
Sbjct: 337 TYNVLIRGLFHAGEFSRGEELMQ 359
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
LK R G+I A + MK + +D TY++V+ F +I A + EMI +G
Sbjct: 237 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 296
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
PSV TYN+++ C++D+V+ AV + M RG P+V +YN +I
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 356
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
++G P+ TY+ ++ + +A LF +M G P+ TY L++
Sbjct: 357 LMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 99/241 (41%), Gaps = 17/241 (7%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C R P+A ++L+ M +G+ + TY++++ F +I A EM + V
Sbjct: 206 CLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDV 265
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
VTY ++V + + +A + M G+ P V +YN +I C
Sbjct: 266 VTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEE 325
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
V +G P+ TY+ L+ L S +L + M G P+ TY ++ E
Sbjct: 326 MVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSE 385
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEE---------ALEIL 283
KA L ++M LP+ + TYN LI G+ R E+ A EIL
Sbjct: 386 VEKALGLFEKMGSGDCLPN--------LDTYNILISGMFVRKRSEDMVVAGNQAFAKEIL 437
Query: 284 R 284
R
Sbjct: 438 R 438
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 168/387 (43%), Gaps = 37/387 (9%)
Query: 84 IGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGL 143
+ C ++ A TLL + I G P V+TYN+L+ Y R +D+A + R M E G+
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 144 SPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFD 203
PDV +YN +IS + G+ PD +Y++LM R EAF
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 204 LFREMLR-GGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVT 262
+ E + G+ P TY LL+A C G A L + + P ++T
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR---------VKPELMT 190
Query: 263 YNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETE 322
YN LI+GLC RV ++R + + G +PNAV+Y+T++ + + + K +L ++ +
Sbjct: 191 YNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMK 250
Query: 323 DKAIWWLD-----------------EDTYDSLMD----SLSYED--TYSSVMNDYLAEGN 359
+ + D E+ Y+ + + +D +Y++++N Y +GN
Sbjct: 251 KEG-YTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGN 309
Query: 360 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 419
+ L ++ G +++++NGL T A++ L I G PS
Sbjct: 310 LDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGM--QPSVVTC 367
Query: 420 DILLEN-CSNSEFKSLVELVKDYSMRD 445
+ L++ C + L +RD
Sbjct: 368 NCLIDGLCKAGHVDRAMRLFASMEVRD 394
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 173/405 (42%), Gaps = 39/405 (9%)
Query: 110 PSVVT--YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
P + T N V + C+ ++++A +L G+ PDV +YN +I +
Sbjct: 9 PGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAY 68
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
+ GI PD TY+SL+ L+ LF EML G+SPD +Y L++
Sbjct: 69 AVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCY 128
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
+G +AF + E IH + G P I TYN L+ LC + A+E+ + +
Sbjct: 129 FKLGRHGEAFKILHEDIH-------LAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK 181
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 347
+ P ++Y+ +I+G C+ +G ++ W+ + S + TY
Sbjct: 182 SR-VKPELMTYNILINGLCKSRRVG------------SVDWMMRELKKSGYTPNAV--TY 226
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 407
++++ Y +++ LQL M ++GY A +++ L K R EA + +
Sbjct: 227 TTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVR 286
Query: 408 DGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTT----MLHLKNK 463
G S + +L + ++ +L+++ M+ L D T HT +L++ N
Sbjct: 287 SGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYT-HTIIVNGLLNIGNT 345
Query: 464 TDGENK----TDGGMY------NLLIFEHCRSHNVHKAYNMYMEM 498
E + GM N LI C++ +V +A ++ M
Sbjct: 346 GGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM 390
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 147/345 (42%), Gaps = 25/345 (7%)
Query: 58 IPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNS 117
I EA + M+ G+ D TY+S+I ++ L EM+ G SP + +YN+
Sbjct: 64 IDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 118 LVFAYCRRDSVDKAVGILRA-MAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 176
L+ Y + +A IL + GL P +D+YN ++ C +
Sbjct: 124 LMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR 183
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
+ P+ TY+ L+ LC +R+ + RE+ + G +P+ +TYT +L K
Sbjct: 184 -VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKG 242
Query: 237 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL-SPNA 295
L +M +G+ D GF+ A++ L R EEA E + + G S +
Sbjct: 243 LQLFLKMKKEGYTFD---GFANC-----AVVSALIKTGRAEEAYECMHELVRSGTRSQDI 294
Query: 296 VSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYL 355
VSY+T+++ + + G L +L E E K L D Y T++ ++N L
Sbjct: 295 VSYNTLLNLYFKDGNLDAVDDLLEEIEMKG---LKPDDY-----------THTIIVNGLL 340
Query: 356 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKR 400
GN A + + G S V + LI+GL K A R
Sbjct: 341 NIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMR 385
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 122/279 (43%), Gaps = 14/279 (5%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L LC+ G A ++ + +K + + + TY+ +I C ++ S ++ E+ G+
Sbjct: 161 LDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGY 219
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
+P+ VTY +++ Y + ++K + + M + G + D + V+S
Sbjct: 220 TPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYE 279
Query: 169 XXXXXVDKGIF-PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
V G D +Y++L+ + L DL E+ G+ PD+ T+T ++N
Sbjct: 280 CMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGL 339
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
+G T H I + G P++VT N LI GLC V+ A+ + M
Sbjct: 340 LNIGN-TGGAEKHLACIGE-------MGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME 391
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAI 326
+ +Y++V+ C+ G L A +L + +K +
Sbjct: 392 ----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGM 426
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 117/307 (38%), Gaps = 93/307 (30%)
Query: 208 MLRG-----GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVT 262
M+RG G+S L + +N+ C +A L + I G LPD ++T
Sbjct: 1 MVRGLMKFPGISTKLLNIS--VNSLCKFRNLERAETLLIDGIRLGVLPD--------VIT 50
Query: 263 YNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETE 322
YN LI G ++EA + R M E G+ P+ +Y+++ISG + L + +L
Sbjct: 51 YNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL----- 105
Query: 323 DKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYV 380
+D ++ S D +Y+++M+ Y G A ++ H+ D +L+ V
Sbjct: 106 -----------FDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHE---DIHLAGLV 151
Query: 381 AYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVK 439
P Y+ILL+ C + + +EL K
Sbjct: 152 ---------------------------------PGIDTYNILLDALCKSGHTDNAIELFK 178
Query: 440 DYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMV 499
HLK++ E T YN+LI C+S V M E+
Sbjct: 179 -------------------HLKSRVKPELMT----YNILINGLCKSRRVGSVDWMMRELK 215
Query: 500 HYGHAPH 506
G+ P+
Sbjct: 216 KSGYTPN 222
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 158/341 (46%), Gaps = 23/341 (6%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
T + ++ C N I+SA+ +L E+ + G P++VTY +++ Y R ++ A +L M
Sbjct: 193 TCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM 252
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
+RG PD +Y ++ +C I P+ TY ++ ALC E++
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 258
EA ++F EML PD ++++A C + +A L +M+ +PD
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN------ 366
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELK 318
+ LIH LC RV EA ++ E G P+ ++Y+T+I+G C+ GEL
Sbjct: 367 --ALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGEL------- 416
Query: 319 IETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 378
TE +W +D Y+ ++ TY+ ++ GN++ +++ +M G +
Sbjct: 417 --TEAGRLW---DDMYERKCKPNAF--TYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPN 469
Query: 379 YVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 419
+ +L GL K + +A + + +G + S+ ++
Sbjct: 470 KTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKESWELF 510
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 129/263 (49%), Gaps = 9/263 (3%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K LC++ I A ++L+ + GL + TY++++G + ++SA +L EM+ +G+
Sbjct: 198 VKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGW 257
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P TY L+ YC+ +A ++ M + + P+ +Y +I C
Sbjct: 258 YPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARN 317
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+++ PD++ +++ALC + ++ EA L+R+ML+ PD + L++ C
Sbjct: 318 MFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLC 377
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G T+A L DE F G P+++TYN LI G+C + EA + M E
Sbjct: 378 KEGRVTEARKLFDE---------FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYE 428
Query: 289 MGLSPNAVSYSTVISGFCQIGEL 311
PNA +Y+ +I G + G +
Sbjct: 429 RKCKPNAFTYNVLIEGLSKNGNV 451
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 137/343 (39%), Gaps = 48/343 (13%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
GI P+ T + L++ALC + + A+ + E+ G+ P+ +TYT +L G+ A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 237 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAV 296
+ +EM+ +G+ PD TY L+ G C L R EA ++ M + + PN V
Sbjct: 246 KRVLEEMLDRGWYPD--------ATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEV 297
Query: 297 SYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLA 356
+Y +I C+ + G+A + DE S M S V++
Sbjct: 298 TYGVMIRALCKEKKSGEARNM-----------FDEMLERSFMPDSSL---CCKVIDALCE 343
Query: 357 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 416
+ + A L M ++ + S LI+ L K+ R EA R L G S+PS
Sbjct: 344 DHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA-RKLFDEFEKG--SIPSL 400
Query: 417 TVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMY 475
Y+ L+ C E L D R +A T Y
Sbjct: 401 LTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFT----------------------Y 438
Query: 476 NLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALD 518
N+LI ++ NV + + EM+ G P+ + L L L
Sbjct: 439 NVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQ 481
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 25/277 (9%)
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
G +P I T N L+ LC + +E A ++L +P MGL PN V+Y+T++ G+ G++ A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 374
+ E D+ W+ D TY LMD Y G A + DM ++
Sbjct: 246 KRVLEEMLDRG-WYPDATTYTVLMDG-------------YCKLGRFSEAATVMDDMEKNE 291
Query: 375 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY--TVYDILLENCSNSEFK 432
+ V Y V+I L K+ ++ EA+ + F+ S V D L E+ E
Sbjct: 292 IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEAC 351
Query: 433 SL-VELVKDYSMRDLSDDAATAH--------TTMLHLKNKTDGENKTDGGMYNLLIFEHC 483
L +++K+ M D + + H T L ++ + + YN LI C
Sbjct: 352 GLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMC 411
Query: 484 RSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDD 520
+ +A ++ +M P+ F+ LI L +
Sbjct: 412 EKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKN 448
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+EGR+ EA ++ + + KG TY+++I C ++ A L +M + P+
Sbjct: 376 LCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPN 434
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSY 150
TYN L+ + +V + V +L M E G P+ ++
Sbjct: 435 AFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTF 473
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/519 (20%), Positives = 213/519 (41%), Gaps = 91/519 (17%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C+ + +A + M+ +GL D+ +S ++ WFC +++ A M + +PS
Sbjct: 356 CKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSS 415
Query: 113 VTY----------------------------------NSLVFAYCRRDSVDKAVGILRAM 138
V N + +C++ VD A L+ M
Sbjct: 416 VLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMM 475
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
++G+ P+V YN ++ C ++KG+ P+ TYS L++ +
Sbjct: 476 EQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDE 535
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 258
A+D+ +M +E+ Y ++N C VG+ +KA + +I + +S
Sbjct: 536 QNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE-------KRYSM 588
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELK 318
+ +YN++I G + + A+E R M E G SPN V+++++I+GFC+ + A E+
Sbjct: 589 SCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMT 648
Query: 319 IETEDKAIWWLDEDTYDSLMDSLSYED----------------------TYSSVMNDYLA 356
E + + LD Y +L+D ++ Y+S+++ +
Sbjct: 649 HEMKSMEL-KLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRN 707
Query: 357 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 416
G M A+ L M DG Y+ +I+GL K A LY +P
Sbjct: 708 LGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASD--LYSELLDLGIVPDE 765
Query: 417 TVYDILLENCSNS-EFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMY 475
++ +L+ S +F +++++ +D++ + +Y
Sbjct: 766 ILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVL----------------------LY 803
Query: 476 NLLIFEHCRSHNVHKAYNMYMEMVHYG--HAPHMFSVLA 512
+ +I H R N+++A+ ++ EM+ G H +F++L
Sbjct: 804 STVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/528 (21%), Positives = 212/528 (40%), Gaps = 90/528 (17%)
Query: 48 SLKRLCREGRIPEAEQMLEVMKCK-GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 106
+++ C+ + A +L M+ K G+ + TY+SVI F ++ A ++ EM+
Sbjct: 280 AVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGF 339
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
G SV+ SLV YC+ + + KA+ + M E GL+PD ++ ++ FC
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 167 XXXXXXXVDKGIFPDAATYSSLMEA----------------------------------L 192
I P + ++++
Sbjct: 400 IEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLF 459
Query: 193 CVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDF 252
C + ++ A + M + G+ P+ + Y ++ A C + A + EM+ KG P+
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519
Query: 253 VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELG 312
TY+ LI G + A +++ M N V Y+T+I+G C++G+
Sbjct: 520 --------FTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTS 571
Query: 313 KAYELKIETEDKAIWWLDEDTYDSLMDSL-----------SYED-----------TYSSV 350
KA E+ + + + +Y+S++D +Y + T++S+
Sbjct: 572 KAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSL 631
Query: 351 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 410
+N + M AL++ H+M AY LI+G KK + A + G
Sbjct: 632 INGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGL 691
Query: 411 LSMPSYTVYDILLENCSN-SEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENK 469
MP+ +VY+ L+ N + + ++L K +S D T +TTM+ DG K
Sbjct: 692 --MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFT-YTTMI------DGLLK 742
Query: 470 TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
DG N++ A ++Y E++ G P + L++ L
Sbjct: 743 -DG--------------NINLASDLYSELLDLGIVPDEILHMVLVNGL 775
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 167/394 (42%), Gaps = 55/394 (13%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C++G++ A L++M+ KG+ + Y++++ C + +D A ++ SEM+ KG P+
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPN 518
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
TY+ L+ + + A ++ M + YN +I+ C
Sbjct: 519 NFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Query: 172 XXVDKGIFPDAAT-YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
+ + + + T Y+S+++ A + +REM G SP+ +T+T L+N C
Sbjct: 579 NLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKS 638
Query: 231 GEFTKAFHLHDEM--------------IHKGF---------------LPDFVTGFSPAIV 261
A + EM + GF LP+ G P +
Sbjct: 639 NRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPEL--GLMPNVS 696
Query: 262 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIET 321
YN+LI G L +++ A+++ + M G+S + +Y+T+I G + G + A +L E
Sbjct: 697 VYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSEL 756
Query: 322 EDKAIWWLDEDTYDSLMDSLSYEDT----------------------YSSVMNDYLAEGN 359
D I DE + L++ LS + YS+V+ + EGN
Sbjct: 757 LDLGIVP-DEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGN 815
Query: 360 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 393
+ A +L +M G + +++L++G +K
Sbjct: 816 LNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEKP 849
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 181/440 (41%), Gaps = 52/440 (11%)
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
GF + +N L+ AY R +D AV M +R + P V N V+S
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 167 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
V G+ D T LM A E++ EA +FR ++ G PD L ++ + A
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 227 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 286
C + A L EM +G L G + TY ++I +EEA+ ++ M
Sbjct: 284 ACKTPDLVMALDLLREM--RGKL-----GVPASQETYTSVIVAFVKEGNMEEAVRVMDEM 336
Query: 287 PEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDT 346
G+ + ++ +++++G+C+ ELGKA +L E+ + L+ +
Sbjct: 337 VGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEE---------------EGLAPDKV 381
Query: 347 YSSVMNDYLAEG-NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 405
SVM ++ + M++A++ M S V +I G KA + EA L I
Sbjct: 382 MFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCL-KAESPEAA---LEI 437
Query: 406 ASDGFLSMPS--YTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 463
+D F S + + I L C + DAAT+ M+ K
Sbjct: 438 FNDSFESWIAHGFMCNKIFLLFCKQGKV-----------------DAATSFLKMMEQKGI 480
Query: 464 TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMY 523
+ + YN ++ HCR N+ A +++ EM+ G P+ F+ LI ++
Sbjct: 481 -----EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNK-D 534
Query: 524 NEMSWVINNTLRSCNLSDSE 543
+ +W + N + + N +E
Sbjct: 535 EQNAWDVINQMNASNFEANE 554
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 209/511 (40%), Gaps = 58/511 (11%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L L R I EA+++ M G+ D T ++ K + A + ++++G
Sbjct: 211 LSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGA 270
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER-GLSPDVDSYNRVISKFCXXXXXXXXX 167
P + ++ V A C+ + A+ +LR M + G+ ++Y VI F
Sbjct: 271 EPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAV 330
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
V GI +SL+ C L +A DLF M G++PD++ ++ ++
Sbjct: 331 RVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWF 390
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFV----------TGFSP--AIVTYNA-----LIHG- 269
C E KA + M P V SP A+ +N + HG
Sbjct: 391 CKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGF 450
Query: 270 --------LCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIET 321
C +V+ A L+ M + G+ PN V Y+ ++ C++ + A + E
Sbjct: 451 MCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEM 510
Query: 322 EDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 381
+K L+ + + TYS +++ + + Q A + + M+ + ++ V
Sbjct: 511 LEKG---LEPNNF-----------TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVI 556
Query: 382 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKD 440
Y+ +INGL K +T +AK L + + SM S T Y+ +++ + S VE ++
Sbjct: 557 YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSM-SCTSYNSIIDGFVKVGDTDSAVETYRE 615
Query: 441 YSMRDLSDDAATAHTTMLH---LKNKTD-----------GENKTDGGMYNLLIFEHCRSH 486
S S + T T++++ N+ D E K D Y LI C+ +
Sbjct: 616 MSENGKSPNVVT-FTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKN 674
Query: 487 NVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
++ AY ++ E+ G P++ +LIS
Sbjct: 675 DMKTAYTLFSELPELGLMPNVSVYNSLISGF 705
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 168/377 (44%), Gaps = 24/377 (6%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C+ + AE ++ M+ +G+ Y +++ + + + + GF+P+V
Sbjct: 425 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
VTY L+ Y + + KA+ + R M E G+ ++ +Y+ +I+ F
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
V +G+ PD Y++++ A C + A +EM + P T+ +++ G+
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
++ + D M G +P + T+N LI+GL ++E+A+EIL M G+S
Sbjct: 605 MRRSLEVFDMMRRCGCVP--------TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 293 PNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMN 352
N +Y+ ++ G+ +G+ GKA+E +++ LD D + TY +++
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG---LDVDIF-----------TYEALLK 702
Query: 353 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 412
G MQ AL + +MS + Y++LI+G ++ EA + + +G
Sbjct: 703 ACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV-- 760
Query: 413 MPSYTVYDILLENCSNS 429
P Y + CS +
Sbjct: 761 KPDIHTYTSFISACSKA 777
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 156/333 (46%), Gaps = 22/333 (6%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
G+I +A ++ VMK +G+ + +TYS +I F L +A + +M+ +G P V+ Y
Sbjct: 498 GKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILY 557
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
N+++ A+C ++D+A+ ++ M + P ++ +I +
Sbjct: 558 NNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRR 617
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
G P T++ L+ L ++++ +A ++ EM GVS +E TYT+++ VG+ K
Sbjct: 618 CGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGK 677
Query: 236 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
AF + ++G D I TY AL+ C R++ AL + + M + N+
Sbjct: 678 AFEYFTRLQNEGLDVD--------IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729
Query: 296 VSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYL 355
Y+ +I G+ + G++ +A +L + + + + D + TY+S ++
Sbjct: 730 FVYNILIDGWARRGDVWEAADLIQQMKKEGV---KPDIH-----------TYTSFISACS 775
Query: 356 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 388
G+M RA Q +M G + Y+ LI G
Sbjct: 776 KAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 808
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 101/482 (20%), Positives = 187/482 (38%), Gaps = 97/482 (20%)
Query: 96 AHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVIS 155
A M A+G +P+ Y SL+ AY +D+A+ +R M E G+ + +Y+ ++
Sbjct: 328 ARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVG 387
Query: 156 KFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSP 215
F +A+ Y ++ A C + A L REM G+
Sbjct: 388 GFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDA 447
Query: 216 DELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDR 275
Y +++ +V + K + + GF+P +VTY LI+ + +
Sbjct: 448 PIAIYHTMMDGYTMVADEKKGLVVFKRLKE--------CGFTPTVVTYGCLINLYTKVGK 499
Query: 276 VEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL------------------ 317
+ +ALE+ R M E G+ N +YS +I+GF ++ + A+ +
Sbjct: 500 ISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNN 559
Query: 318 ------KIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLAEGNMQRALQLDH 368
+ D+AI + E M L + T+ +++ Y G+M+R+L++
Sbjct: 560 IISAFCGMGNMDRAIQTVKE------MQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613
Query: 369 DMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS--------MPSYT--- 417
M R G + + ++ LINGL +K + +A L + G + M Y
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 673
Query: 418 ----------------------VYDILLENCSNS-EFKSLVELVKDYSMRDLSDDAATAH 454
Y+ LL+ C S +S + + K+ S R++ ++
Sbjct: 674 DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF--- 730
Query: 455 TTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 514
+YN+LI R +V +A ++ +M G P + + + I
Sbjct: 731 -------------------VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI 771
Query: 515 SA 516
SA
Sbjct: 772 SA 773
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 123/315 (39%), Gaps = 23/315 (7%)
Query: 14 MALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKR-------------LCREGRIPE 60
M +V +YN +I F G D + V E Q L+ + G +
Sbjct: 550 MKPDVILYNNIISAFC-GMGNMDRAIQTVKE-MQKLRHRPTTRTFMPIIHGYAKSGDMRR 607
Query: 61 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 120
+ ++ ++M+ G T++ +I +++ A +L EM G S + TY ++
Sbjct: 608 SLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 667
Query: 121 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 180
Y KA + GL D+ +Y ++ C + I
Sbjct: 668 GYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPR 727
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
++ Y+ L++ + EA DL ++M + GV PD TYT ++AC G+ +A
Sbjct: 728 NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTI 787
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
+EM G P I TY LI G E+AL M MG+ P+ Y
Sbjct: 788 EEM--------EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHC 839
Query: 301 VISGFCQIGELGKAY 315
+++ + +AY
Sbjct: 840 LLTSLLSRASIAEAY 854
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 17/214 (7%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
LK C+ GR+ A + + M + + + Y+ +I + + A L+ +M +G
Sbjct: 701 LKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV 760
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P + TY S + A + +++A + M G+ P++ +Y +I +
Sbjct: 761 KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALS 820
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAF------DLFREMLRGGVSPDELTYTR 222
GI PD A Y L+ +L ++EA+ + +EM+ G+ D T
Sbjct: 821 CYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVH 880
Query: 223 LLNACCLV----GEFTKAFHLHDEMIHKGFLPDF 252
C + GE T E + K F PD+
Sbjct: 881 WSKCLCKIEASGGELT-------ETLQKTFPPDW 907
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 159/347 (45%), Gaps = 26/347 (7%)
Query: 56 GRIPEAEQMLEV---MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
G++ E++L V MK G+ TY+ ++ + +DSA + M + P +
Sbjct: 198 GKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDI 257
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
VTYN+++ YC+ KA+ LR M RG D +Y +I
Sbjct: 258 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQE 317
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
+KGI +S ++ LC E +L+E + +F M+R G P+ YT L++ G
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
A L MI +GF PD +VTY+ +++GLC RVEEAL+ GL+
Sbjct: 378 VEDAIRLLHRMIDEGFKPD--------VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLA 429
Query: 293 PNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMN 352
N++ YS++I G + G + +A L E +K D+Y Y+++++
Sbjct: 430 INSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC---TRDSY-----------CYNALID 475
Query: 353 DYLAEGNMQRALQLDHDM-SRDGYLSSYVAYSVLINGLHKKARTREA 398
+ + A+ L M +G + Y++L++G+ K+ R EA
Sbjct: 476 AFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEA 522
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 136/322 (42%), Gaps = 24/322 (7%)
Query: 80 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 139
Y S++ +D + SE+ F +V N+L+ ++ + V++ + + R M
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 140 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 199
E G+ P + +YN +++ I PD TY+++++ C +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF-LPDFVTGFSP 258
+A + R+M G D++TY ++ AC +F L+ EM KG +P
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPH------ 328
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELK 318
++ +I GLC ++ E + M G PN Y+ +I G+ + G + A L
Sbjct: 329 ---AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLL 385
Query: 319 IETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 378
+DE ++ TYS V+N G ++ AL H DG +
Sbjct: 386 HRM-------IDEGFKPDVV-------TYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 431
Query: 379 YVAYSVLINGLHKKARTREAKR 400
+ YS LI+GL K R EA+R
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAER 453
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 10/267 (3%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+EG++ E + E M KG + Y+ +I + ++ A LL MI +GF P
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VVTY+ +V C+ V++A+ GL+ + Y+ +I
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE 456
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM-LRGGVSPDELTYTRLLNACCLV 230
+KG D+ Y++L++A +++ EA LF+ M G TYT LL+
Sbjct: 457 EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKE 516
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
+A L D MI K G +P + AL GLC +V A +IL + MG
Sbjct: 517 HRNEEALKLWDMMIDK--------GITPTAACFRALSTGLCLSGKVARACKILDELAPMG 568
Query: 291 LSPNAVSYSTVISGFCQIGELGKAYEL 317
+ +A +I+ C+ G + +A +L
Sbjct: 569 VILDAAC-EDMINTLCKAGRIKEACKL 594
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 150/357 (42%), Gaps = 27/357 (7%)
Query: 58 IPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNS 117
+ AE++ EVM+ + D TY+++I +C + A L +M +G +TY +
Sbjct: 238 VDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMT 297
Query: 118 LVFAYCRRDS-VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 176
++ A C DS V + + M E+G+ +++ VI C + K
Sbjct: 298 MIQA-CYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK 356
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
G P+ A Y+ L++ + +A L M+ G PD +TY+ ++N C G +A
Sbjct: 357 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 237 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAV 296
F G + + Y++LI GL RV+EA + M E G + ++
Sbjct: 417 LDY--------FHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 297 SYSTVISGFCQIGELGKAYEL--KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDY 354
Y+ +I F + ++ +A L ++E E+ D+ Y TY+ +++
Sbjct: 469 CYNALIDAFTKHRKVDEAIALFKRMEEEEGC----DQTVY-----------TYTILLSGM 513
Query: 355 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
E + AL+L M G + + L GL + A + L +A G +
Sbjct: 514 FKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 13/243 (5%)
Query: 17 NVNIYNGMIRGFATAAGKSDSES---KKVGEAFQS--------LKRLCREGRIPEAEQML 65
NV IY +I G+A + D+ + + E F+ + LC+ GR+ EA
Sbjct: 361 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
+ GL ++ YSS+I ++D A L EM KG + YN+L+ A+ +
Sbjct: 421 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKH 480
Query: 126 DSVDKAVGILRAM-AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 184
VD+A+ + + M E G V +Y ++S +DKGI P AA
Sbjct: 481 RKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAAC 540
Query: 185 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 244
+ +L LC+ +++ A + E+ GV D ++N C G +A L D +
Sbjct: 541 FRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGIT 599
Query: 245 HKG 247
+G
Sbjct: 600 ERG 602
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 164/376 (43%), Gaps = 53/376 (14%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C+ GR+ A + +++ + + +D TY++VI C D A+ LSEM+ G P
Sbjct: 139 FCKVGRLSFA---ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPD 195
Query: 112 VVTYNSLVFAYCRRDSVDKAVGIL----------------------------RAMAERGL 143
V+YN+L+ +C+ + +A ++ R M G
Sbjct: 196 TVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGF 255
Query: 144 SPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFD 203
PDV +++ +I++ C + ++P+ TY++L+++L A
Sbjct: 256 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALA 315
Query: 204 LFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTY 263
L+ +M+ G+ D + YT L++ G+ +A E K L D P +VTY
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREA-----EKTFKMLLED---NQVPNVVTY 367
Query: 264 NALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETED 323
AL+ GLC + A I+ M E + PN V+YS++I+G+ + G L +A L + ED
Sbjct: 368 TALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMED 427
Query: 324 KAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 383
+ + + TY +V++ G + A++L +M G +
Sbjct: 428 QNV--------------VPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILD 473
Query: 384 VLINGLHKKARTREAK 399
L+N L + R +E K
Sbjct: 474 ALVNHLKRIGRIKEVK 489
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 170/392 (43%), Gaps = 63/392 (16%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE--------- 102
LC G EA Q L M G+ D +Y+++I FC + A L+ E
Sbjct: 171 LCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITH 230
Query: 103 -------------------MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGL 143
M+ GF P VVT++S++ C+ V + +LR M E +
Sbjct: 231 TILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSV 290
Query: 144 SPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFD 203
P+ +Y ++ V +GI D Y+ LM+ L L EA
Sbjct: 291 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350
Query: 204 LFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTY 263
F+ +L P+ +TYT L++ C G+ + A + +M+ K +P+ +VTY
Sbjct: 351 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN--------VVTY 402
Query: 264 NALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETED 323
+++I+G +EEA+ +LR M + + PN +Y TVI G + G+ A EL +++
Sbjct: 403 SSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL---SKE 459
Query: 324 KAIWWLDEDTY--DSLMDSLSY----------------------EDTYSSVMNDYLAEGN 359
+ ++E+ Y D+L++ L + Y+S+++ + G+
Sbjct: 460 MRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGD 519
Query: 360 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 391
+ AL +M G V+Y+VLI+G+ K
Sbjct: 520 EEAALAWAEEMQERGMPWDVVSYNVLISGMLK 551
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 172/413 (41%), Gaps = 80/413 (19%)
Query: 46 FQSLKRL---CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKI--DSAHTLL 100
F +L RL C R+ A + L M G+ D R ++S+I F N+N + D +
Sbjct: 61 FHTLFRLYLSCE--RLYGAARTLSAMCTFGVVPDSRLWNSLIHQF-NVNGLVHDQVSLIY 117
Query: 101 SEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXX 160
S+MIA G SP V N L+ ++C+ + A+ +LR R +S D +YN VIS C
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISIDTVTYNTVISGLCEH 174
Query: 161 XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC-----VEQR-----------------L 198
V GI PD +Y++L++ C V + L
Sbjct: 175 GLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILL 234
Query: 199 SEAFDL------FREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDF 252
S ++L +R+M+ G PD +T++ ++N C G+ + L EM P+
Sbjct: 235 SSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNH 294
Query: 253 VT---------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRG 285
VT G +V Y L+ GL + EA + +
Sbjct: 295 VTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKM 354
Query: 286 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 345
+ E PN V+Y+ ++ G C+ G+L A + + +K++ +
Sbjct: 355 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSV--------------IPNVV 400
Query: 346 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
TYSS++N Y+ +G ++ A+ L M + + Y +I+GL K + A
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMA 453
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 115/257 (44%), Gaps = 8/257 (3%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC G++ EA +L M + + TY + + D+ +++ G S
Sbjct: 618 LCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLS 677
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
YN+L+ C+ KA ++ M RG PD ++N ++ +
Sbjct: 678 RQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYS 737
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
++ GI P+ ATY++++ L + E EM G+ PD+ TY L++ +G
Sbjct: 738 VMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIG 797
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ ++ EMI G +P TYN LI + ++ +A E+L+ M + G+
Sbjct: 798 NMKGSMTIYCEMIADGLVPK--------TSTYNVLISEFANVGKMLQARELLKEMGKRGV 849
Query: 292 SPNAVSYSTVISGFCQI 308
SPN +Y T+ISG C++
Sbjct: 850 SPNTSTYCTMISGLCKL 866
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 157/390 (40%), Gaps = 59/390 (15%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+ L R GRI E + +++ M KG+ LD+ Y+S+I F ++A EM +G
Sbjct: 476 VNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 535
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNR---------------- 152
VV+YN L+ + V A + M E+G+ PD+ ++N
Sbjct: 536 PWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILK 594
Query: 153 -------------------VISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 193
V+ C + I P+ TY ++
Sbjct: 595 LWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSS 654
Query: 194 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 253
+R F +L G+ Y L+ C +G KA + +M +GF+PD
Sbjct: 655 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD-- 712
Query: 254 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGK 313
VT+N+L+HG V +AL M E G+SPN +Y+T+I G G
Sbjct: 713 ------TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAG---- 762
Query: 314 AYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRD 373
I+ DK WL E + + TY+++++ GNM+ ++ + +M D
Sbjct: 763 ----LIKEVDK---WLSEMKSRGMRPD---DFTYNALISGQAKIGNMKGSMTIYCEMIAD 812
Query: 374 GYLSSYVAYSVLINGLHKKARTREAKRDLL 403
G + Y+VLI+ + +A R+LL
Sbjct: 813 GLVPKTSTYNVLISEFANVGKMLQA-RELL 841
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/520 (20%), Positives = 221/520 (42%), Gaps = 53/520 (10%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+ RLC+ G++ E +L M+ ++ + TY++++ N A L S+M+ +G
Sbjct: 266 INRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGI 325
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
+V Y L+ + + +A + + E P+V +Y ++ C
Sbjct: 326 PVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEF 385
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
++K + P+ TYSS++ + L EA L R+M V P+ TY +++
Sbjct: 386 IITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLF 445
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G+ A L EM + G +AL++ L + R++E +++ M
Sbjct: 446 KAGKEEMAIELSKEM--------RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVS 497
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL------- 341
G++ + ++Y+++I F + G+ A E +++ + W D +Y+ L+ +
Sbjct: 498 KGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPW-DVVSYNVLISGMLKFGKVG 556
Query: 342 ---SYED-----------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 387
+Y+ T++ +MN +G+ + L+L M G S ++ ++++
Sbjct: 557 ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVG 616
Query: 388 GLHKKARTREAKRDLLYIASDGFLS--MPSYTVYDILLENCSNSE-----FKSLVELVKD 440
L + + EA ++I + L P+ T Y I L+ S + FK+ E +
Sbjct: 617 MLCENGKMEEA----IHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTH-ETLLS 671
Query: 441 YSMRDLSDDAATAHTTM--LHLKNKT-----DGENK---TDGGMYNLLIFEHCRSHNVHK 490
Y ++ T T+ L + K D E + D +N L+ + +V K
Sbjct: 672 YGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRK 731
Query: 491 AYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEM-SWV 529
A + Y M+ G +P++ + +I L D + E+ W+
Sbjct: 732 ALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL 771
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 107/518 (20%), Positives = 207/518 (39%), Gaps = 84/518 (16%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L + G + EAE+ +++ + TY++++ C + SA ++++M+ K P+
Sbjct: 339 LFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 398
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VVTY+S++ Y ++ +++AV +LR M ++ + P+ +Y VI
Sbjct: 399 VVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSK 458
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
G+ + +L+ L R+ E L ++M+ GV+ D++ YT L++ G
Sbjct: 459 EMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518
Query: 232 EFTKAFHLHDEMIHKGFLPDFVT--------------------------GFSPAIVTYNA 265
+ A +EM +G D V+ G P I T+N
Sbjct: 519 DEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNI 578
Query: 266 LIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA----------- 314
+++ E L++ M G+ P+ +S + V+ C+ G++ +A
Sbjct: 579 MMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME 638
Query: 315 -------YELKIETEDK-----AIWWLDEDTYDSLMDSLSY-----EDTYSSVMNDYLAE 357
Y + ++T K AI+ T+++L LSY Y++++
Sbjct: 639 IHPNLTTYRIFLDTSSKHKRADAIF----KTHETL---LSYGIKLSRQVYNTLIATLCKL 691
Query: 358 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 417
G ++A + DM G++ V ++ L++G + R+A + G P+
Sbjct: 692 GMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI--SPNVA 749
Query: 418 VYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNL 477
Y+ ++ R LSD + K+ G + D YN
Sbjct: 750 TYNTII--------------------RGLSDAGLIKEVDKWLSEMKSRGM-RPDDFTYNA 788
Query: 478 LIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALIS 515
LI + N+ + +Y EM+ G P + LIS
Sbjct: 789 LISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLIS 826
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 17 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLD 76
NV YN +IRG + A G I E ++ L MK +G+ D
Sbjct: 747 NVATYNTIIRGLSDA------------------------GLIKEVDKWLSEMKSRGMRPD 782
Query: 77 ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 136
+ TY+++I + + + T+ EMIA G P TYN L+ + + +A +L+
Sbjct: 783 DFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLK 842
Query: 137 AMAERGLSPDVDSYNRVISKFC 158
M +RG+SP+ +Y +IS C
Sbjct: 843 EMGKRGVSPNTSTYCTMISGLC 864
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 182/415 (43%), Gaps = 36/415 (8%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L LC G++ +A +++EVM + S+++ ++++D A +L M+ G
Sbjct: 111 LHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGG 170
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P +TYN ++ C++ + A+ +L M+ G PDV +YN VI
Sbjct: 171 VPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIR 230
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ G P TY+ L+E +C + A ++ +M G PD +TY L+N C
Sbjct: 231 FWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNC 290
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G + + ++ G VTYN L+H LC + +E EIL M +
Sbjct: 291 RRGNLEEVASVIQHILSH--------GLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIET-EDKAIWWLDEDTYDSLMDSLSYED-- 345
P ++Y+ +I+G C+ L +A + + E K + D TY++++ ++S E
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP--DIVTYNTVLGAMSKEGMV 400
Query: 346 --------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 385
TY+SV++ +G M++AL+L H M G + L
Sbjct: 401 DDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSL 460
Query: 386 INGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVK 439
I G + EA + L ++ G + + Y ++++ C E + +E+V+
Sbjct: 461 IYGFCRANLVEEAGQVLKETSNRG--NGIRGSTYRLVIQGLCKKKEIEMAIEVVE 513
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 163/378 (43%), Gaps = 28/378 (7%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+ LC++G I A +LE M G D TY++VI + + A + + G
Sbjct: 181 IGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGC 240
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P ++TY LV CR +A+ +L MA G PD+ +YN +++ C
Sbjct: 241 PPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVAS 300
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ G+ + TY++L+ +LC + E ++ M + P +TY L+N C
Sbjct: 301 VIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLC 360
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
++A +M+ + LPD IVTYN ++ + V++A+E+L +
Sbjct: 361 KARLLSRAIDFFYQMLEQKCLPD--------IVTYNTVLGAMSKEGMVDDAIELLGLLKN 412
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED--T 346
P ++Y++VI G + G + KA EL Y ++D+ + D T
Sbjct: 413 TCCPPGLITYNSVIDGLAKKGLMKKALEL----------------YHQMLDAGIFPDDIT 456
Query: 347 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 406
S++ + ++ A Q+ + S G Y ++I GL KK A + +
Sbjct: 457 RRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIML 516
Query: 407 SDGFLSMPSYTVYDILLE 424
+ G P T+Y +++
Sbjct: 517 TGG--CKPDETIYTAIVK 532
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 27/285 (9%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
+CR A ++LE M +G + D TY+S++ + C ++ +++ +++ G +
Sbjct: 254 VCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELN 313
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VTYN+L+ + C + D+ IL M + P V +YN +I+ C
Sbjct: 314 TVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFY 373
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+++ PD TY++++ A+ E + +A +L + P +TY +++ G
Sbjct: 374 QMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKG 433
Query: 232 EFTKAFHLHDEMIHKGFLPDFVT------GFSPAIV---------------------TYN 264
KA L+ +M+ G PD +T GF A + TY
Sbjct: 434 LMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYR 493
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG 309
+I GLC +E A+E++ M G P+ Y+ ++ G ++G
Sbjct: 494 LVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 136/346 (39%), Gaps = 47/346 (13%)
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
D T + ++ LC +L++A L M R P + + L+ + + KA +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
M+ G +PD +TYN +I LC + AL +L M G P+ ++Y+T
Sbjct: 163 RVMVMSGGVPD--------TITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNT 214
Query: 301 VISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS-YEDTYSSVMNDYLAEGN 359
VI G +A +W D+ L + + TY+ ++
Sbjct: 215 VIRCMFDYGNAEQAIR----------FWKDQ-----LQNGCPPFMITYTVLVELVCRYCG 259
Query: 360 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 419
RA+++ DM+ +G V Y+ L+N ++ E + +I S G L + + T
Sbjct: 260 SARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHG-LELNTVTYN 318
Query: 420 DILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLI 479
+L CS+ + + E++ T YN+LI
Sbjct: 319 TLLHSLCSHEYWDEVEEILNIMYQTSYCPTVIT----------------------YNILI 356
Query: 480 FEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 525
C++ + +A + + +M+ P + + ++ A+ + M ++
Sbjct: 357 NGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 193/483 (39%), Gaps = 58/483 (12%)
Query: 80 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 139
Y V+ C +I+ A +++ +M G P V Y++++ + + ++ KAV + M
Sbjct: 294 YRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKML 353
Query: 140 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 199
++ + + ++ +C + I D Y+ +AL ++
Sbjct: 354 KKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVE 413
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 259
EA +LFREM G++PD + YT L+ CCL G+ + AF L EM TG +P
Sbjct: 414 EAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDG--------TGKTPD 465
Query: 260 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA----- 314
IV YN L GL +EA E L+ M G+ P V+++ VI G GEL KA
Sbjct: 466 IVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYE 525
Query: 315 -YELKIETEDKAI---------------------WWLDEDTYDSLMDSLSYEDTYSSVMN 352
E K D ++ + L + Y +L SL E Y S
Sbjct: 526 SLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQ 585
Query: 353 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 412
D L M + G Y LI + R+A+ + + +
Sbjct: 586 DLLDR------------MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIV- 632
Query: 413 MPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENK-- 469
P Y I++ C +E K L +D RD+ D T ++ +L+ + D + +
Sbjct: 633 -PDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVT-YSVLLNSDPELDMKREME 690
Query: 470 -----TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYN 524
D Y ++I +C +++ K Y ++ +M P + + L+ + +
Sbjct: 691 AFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSR 750
Query: 525 EMS 527
EM
Sbjct: 751 EMK 753
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 128/274 (46%), Gaps = 22/274 (8%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
CR + +A + E++ K + D TY+ +I +C LN+ A+ L +M + P V
Sbjct: 611 CRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDV 670
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
VTY+ L+ + D + + R M + PDV Y +I+++C
Sbjct: 671 VTYSVLL-------NSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKD 723
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
+ I PD TY+ L++ E+ LS REM V PD YT L++ C +G+
Sbjct: 724 MKRREIVPDVVTYTVLLKNK-PERNLS------REMKAFDVKPDVFYYTVLIDWQCKIGD 776
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
+A + D+MI G PD Y ALI C + ++EA I M E G+
Sbjct: 777 LGEAKRIFDQMIESGVDPD--------AAPYTALIACCCKMGYLKEAKMIFDRMIESGVK 828
Query: 293 PNAVSYSTVISGFCQIGELGKAYELKIETEDKAI 326
P+ V Y+ +I+G C+ G + KA +L E +K I
Sbjct: 829 PDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 191/491 (38%), Gaps = 61/491 (12%)
Query: 58 IPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNS 117
IP+A + M K ++ SS++ +C + A+ L E S V YN
Sbjct: 342 IPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNV 401
Query: 118 LVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG 177
A + V++A+ + R M +G++PDV +Y +I C G
Sbjct: 402 AFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTG 461
Query: 178 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 237
PD Y+ L L EAF+ + M GV P +T+ ++ GE KA
Sbjct: 462 KTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAE 521
Query: 238 HLHDEMIHKGFLPD--FVTGFSPAIV------------------TYNALIHGLCF-LDRV 276
++ + HK D V GF A Y L LC D +
Sbjct: 522 AFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYI 581
Query: 277 EEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDS 336
+A ++L M ++G+ P Y +I +C++ + KA E ++
Sbjct: 582 SKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREF----------------FEI 625
Query: 337 LMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR 394
L+ D TY+ ++N Y ++A L DM R V YSVL+N +
Sbjct: 626 LVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDM 685
Query: 395 TREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATA 453
RE + F +P Y I++ C ++ K + L KD R++ D T
Sbjct: 686 KREM---------EAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVT- 735
Query: 454 HTTMLHLKNKTDG---------ENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHA 504
+T +L KNK + + K D Y +LI C+ ++ +A ++ +M+ G
Sbjct: 736 YTVLL--KNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVD 793
Query: 505 PHMFSVLALIS 515
P ALI+
Sbjct: 794 PDAAPYTALIA 804
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 178/466 (38%), Gaps = 54/466 (11%)
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
GL D TY V+ + + LLS ++ V Y + + C D A
Sbjct: 212 GLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIA 271
Query: 132 VGILRAMAERGLSPDVD----SYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 187
+L+ + + + D +Y +V+ C GI PD YS+
Sbjct: 272 YFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSA 331
Query: 188 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 247
++E + +A D+F +ML+ + + + +L C +G F++A+ L E
Sbjct: 332 IIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRE-- 389
Query: 248 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQ 307
T S V YN L L +VEEA+E+ R M G++P+ ++Y+T+I G C
Sbjct: 390 ------TNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCL 443
Query: 308 IGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLD 367
G+ A++L IE + T D ++ Y+ + G Q A +
Sbjct: 444 QGKCSDAFDLMIEMDGTG------KTPDIVI--------YNVLAGGLATNGLAQEAFETL 489
Query: 368 HDMSRDGYLSSYVAYSVLINGLHKKARTREAK---RDLLYIASDGFLSMPSYTVYDILLE 424
M G +YV ++++I GL +A+ L + + + SM V
Sbjct: 490 KMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASM----VKGFCAA 545
Query: 425 NCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT-------------- 470
C + F+ + L + + T L + D +K
Sbjct: 546 GCLDHAFERFIRL-------EFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEP 598
Query: 471 DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA 516
+ MY LI CR +NV KA + +V P +F+ +I+
Sbjct: 599 EKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINT 644
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 115/521 (22%), Positives = 199/521 (38%), Gaps = 102/521 (19%)
Query: 45 AFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI 104
AF +L +L G++ EA ++ M KG+ D Y+++IG C K A L+ EM
Sbjct: 402 AFDALGKL---GKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMD 458
Query: 105 A-----------------------------------KGFSPSVVTYNSLVFAYCRRDSVD 129
+G P+ VT+N ++ +D
Sbjct: 459 GTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELD 518
Query: 130 KAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP-DAATYSSL 188
KA ++ + D ++ FC FP + Y +L
Sbjct: 519 KAEAFYESLEHKSRENDAS----MVKGFCAAGCLDHAFERFIRLE----FPLPKSVYFTL 570
Query: 189 MEALCVEQR-LSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 247
+LC E+ +S+A DL M + GV P++ Y +L+ A C V KA + ++ K
Sbjct: 571 FTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKK 630
Query: 248 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQ 307
+PD + TY +I+ C L+ ++A + M + P+ V+YS +
Sbjct: 631 IVPD--------LFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVL------ 676
Query: 308 IGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLD 367
L EL ++ E +A +D + D + Y+ ++N Y ++++ L
Sbjct: 677 ---LNSDPELDMKREMEA--------FDVIPDVV----YYTIMINRYCHLNDLKKVYALF 721
Query: 368 HDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE-NC 426
DM R + V Y+VL+ ++ +RE K F P Y +L++ C
Sbjct: 722 KDMKRREIVPDVVTYTVLLKNKPERNLSREMK---------AFDVKPDVFYYTVLIDWQC 772
Query: 427 SNSEFKSLVELVKDYSMRDLSDDAATAHTTML-------HLKNKT-------DGENKTDG 472
+ + + D + D A +T ++ +LK + K D
Sbjct: 773 KIGDLGE-AKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDV 831
Query: 473 GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLAL 513
Y LI CR+ V KA + EM+ G P S+ A+
Sbjct: 832 VPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 139/358 (38%), Gaps = 67/358 (18%)
Query: 17 NVNIYNGMIRGFATAAGKSDS-------ESKKVGEAFQS----LKRLCREGRIPEAEQML 65
++ IYN + G AT ++ E++ V + + ++ L G + +AE
Sbjct: 465 DIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFY 524
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC-R 124
E ++ K D +S++ FC +D A I F Y +L + C
Sbjct: 525 ESLEHKSREND----ASMVKGFCAAGCLDHA---FERFIRLEFPLPKSVYFTLFTSLCAE 577
Query: 125 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 184
+D + KA +L M + G+ P+ Y ++I +C V K I PD T
Sbjct: 578 KDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFT 637
Query: 185 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA------------------ 226
Y+ ++ C +A+ LF +M R V PD +TY+ LLN+
Sbjct: 638 YTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPD 697
Query: 227 ----------CCLVGEFTKAFHLHDEMIHKGFLPDFVT--------------------GF 256
C + + K + L +M + +PD VT
Sbjct: 698 VVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDV 757
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
P + Y LI C + + EA I M E G+ P+A Y+ +I+ C++G L +A
Sbjct: 758 KPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEA 815
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 133/373 (35%), Gaps = 46/373 (12%)
Query: 78 RTYSSVIGWFCNLNKIDSAHTLLSEMI-----AKGFS------------PSVV----TYN 116
+ Y++VI C T L E++ +GFS S+V
Sbjct: 91 QAYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVST 150
Query: 117 SLVFAYCRRDSVDKAVGIL-RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
+LV AY D D+A+ I RA G +PD+ + N +IS+
Sbjct: 151 ALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIER 210
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
G+ DA TY +++AL E L +L + Y + CL
Sbjct: 211 LGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDI 270
Query: 236 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
A+ L + L D S + Y ++ GLC+ R+E+A ++ M + G+ P+
Sbjct: 271 AYFLLQPLRDANILVDK----SDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDV 326
Query: 296 VSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMND 353
YS +I G + + KA D ++ ++ + SS++
Sbjct: 327 YVYSAIIEGHRKNMNIPKAV----------------DVFNKMLKKRKRINCVIVSSILQC 370
Query: 354 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM 413
Y GN A L + V Y+V + L K + EA + G
Sbjct: 371 YCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGI--A 428
Query: 414 PSYTVYDILLENC 426
P Y L+ C
Sbjct: 429 PDVINYTTLIGGC 441
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 164/371 (44%), Gaps = 37/371 (9%)
Query: 14 MALNVNIYNGMIRGFATAAGKS--DSESKKVGEAF--QSLKRLCREGRIPEAEQMLEVMK 69
++LN+ ++ ++ G A A KS D+ K Q +K L EG + EA ++ V+K
Sbjct: 114 VSLNI-LFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLK 172
Query: 70 CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVD 129
G+ T +SV+ K+D L EM+ F + L+ A C V
Sbjct: 173 DMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI--RCLIRALCDGGDVS 230
Query: 130 KAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLM 189
+ +L+ ++GL P Y ++IS FC + FP Y ++
Sbjct: 231 EGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKII 290
Query: 190 EALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFL 249
+ LC+ ++ EA+ +F+ + G +PD + YT ++ C G A L EMI KG
Sbjct: 291 KGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMR 350
Query: 250 PD---------------------------FVTGFSPAIVTYNALIHGLCFLDRVEEALEI 282
P+ G+ +++ N +I G C + +EA EI
Sbjct: 351 PNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEI 410
Query: 283 LRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDED-TYDSLMDSL 341
+ M E G++PNA++Y+ +I GFC+ ++ K LK+ E KA+ Y +L+ +L
Sbjct: 411 FKNMSETGVTPNAITYNALIKGFCKENKVEKG--LKLYKELKALGLKPSGMAYAALVRNL 468
Query: 342 SYEDTYSSVMN 352
D+ ++ +N
Sbjct: 469 KMSDSVATSLN 479
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 145/356 (40%), Gaps = 27/356 (7%)
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
GF P V V++A+ + + + G+S V + N V+
Sbjct: 140 GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRF 199
Query: 167 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
V+ D+ L+ ALC +SE ++L ++ L+ G+ P + Y +L++
Sbjct: 200 WELHKEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISG 257
Query: 227 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 286
C +G + + MI P ++ Y +I GLC + EA I + +
Sbjct: 258 FCEIGNYACMSEVLHTMIAWNHFP--------SMYIYQKIIKGLCMNKKQLEAYCIFKNL 309
Query: 287 PEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDT 346
+ G +P+ V Y+T+I GFC+ G LG A +L E K + E
Sbjct: 310 KDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGM--------------RPNEFA 355
Query: 347 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 406
Y+ +++ + G + ++M R+GY + ++ + +I G ++ EA ++
Sbjct: 356 YNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMS 415
Query: 407 SDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLK 461
G P+ Y+ L++ C ++ + ++L K+ L + +LK
Sbjct: 416 ETGV--TPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLK 469
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 132/355 (37%), Gaps = 40/355 (11%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
G P+ ++ L E + EA +++ + G+S +T +L C + +
Sbjct: 140 GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRF 199
Query: 237 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAV 296
+ LH EM+ F + + LI LC V E E+L+ + GL P
Sbjct: 200 WELHKEMVESEFDSERI----------RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQY 249
Query: 297 SYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLA 356
Y+ +ISGFC+IG Y E I W + + S+ Y ++
Sbjct: 250 VYAKLISGFCEIGN----YACMSEVLHTMIAW---NHFPSMY-------IYQKIIKGLCM 295
Query: 357 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 416
A + ++ GY V Y+ +I G +K A++ + G P+
Sbjct: 296 NKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGM--RPNE 353
Query: 417 TVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH--------------LKN 462
Y++++ SLVE + +R+ + TM+ KN
Sbjct: 354 FAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKN 413
Query: 463 KTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
++ + YN LI C+ + V K +Y E+ G P + AL+ L
Sbjct: 414 MSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 178/423 (42%), Gaps = 35/423 (8%)
Query: 13 KMALNVNIYNGMIRGFATAAGKSDSE-----------SKKVGEAFQSLKRLCREGRIPEA 61
K+ L+V + N +I GFA + S + S K + L GR EA
Sbjct: 264 KLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEA 323
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
E + E ++ G+ R Y++++ + + A +++SEM +G SP TY+ L+ A
Sbjct: 324 EALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDA 383
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 181
Y + A +L+ M + P+ ++R+++ F G+ PD
Sbjct: 384 YVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD 443
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 241
Y+ +++ L A F ML G+ PD +T+ L++ C G A + +
Sbjct: 444 RQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFE 503
Query: 242 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTV 301
M +G L P TYN +I+ +R ++ +L M G+ PN V+++T+
Sbjct: 504 AMERRGCL--------PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTL 555
Query: 302 ISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQ 361
+ + + G A E L+E L S + Y++++N Y G +
Sbjct: 556 VDVYGKSGRFNDAIEC-----------LEEMKSVGLKPSST---MYNALINAYAQRGLSE 601
Query: 362 RALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDI 421
+A+ M+ DG S +A + LIN + R EA L Y+ +G P Y
Sbjct: 602 QAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV--KPDVVTYTT 659
Query: 422 LLE 424
L++
Sbjct: 660 LMK 662
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 22/341 (6%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
LK + G + +AE M+ M+ +G+ DE TYS +I + N + +SA +L EM A
Sbjct: 346 LKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 405
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P+ ++ L+ + R K +L+ M G+ PD YN VI F
Sbjct: 406 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 465
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ +GI PD T+++L++ C R A ++F M R G P TY ++N+
Sbjct: 466 TFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYG 525
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
+ L +M +G LP+ +VT+ L+ R +A+E L M
Sbjct: 526 DQERWDDMKRLLGKMKSQGILPN--------VVTHTTLVDVYGKSGRFNDAIECLEEMKS 577
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
+GL P++ Y+ +I+ + Q G ++A+ T D L SL +
Sbjct: 578 VGLKPSSTMYNALINAYAQRG-----------LSEQAVNAFRVMTSDGLKPSLL---ALN 623
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 389
S++N + + A + M +G V Y+ L+ L
Sbjct: 624 SLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 664
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 115/251 (45%), Gaps = 8/251 (3%)
Query: 63 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 122
Q+L+ MK G+ D + Y+ VI F N +D A T M+++G P VT+N+L+ +
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 123 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 182
C+ A + AM RG P +YN +I+ + +GI P+
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 183 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 242
T+++L++ R ++A + EM G+ P Y L+NA G +A +
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 243 MIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVI 302
M G P+++ N+LI+ R EA +L+ M E G+ P+ V+Y+T++
Sbjct: 610 MTSDGL--------KPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 661
Query: 303 SGFCQIGELGK 313
++ + K
Sbjct: 662 KALIRVDKFQK 672
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C+ GR AE+M E M+ +G TY+ +I + + + D LL +M ++G P+V
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
VT+ +LV Y + + A+ L M GL P YN +I+ +
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
G+ P +SL+ A ++R +EAF + + M GV PD +TYT L+ A V +
Sbjct: 610 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 669
Query: 233 FTKAFHLHDEMIHKGFLPD 251
F K +++EMI G PD
Sbjct: 670 FQKVPVVYEEMIMSGCKPD 688
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 185/469 (39%), Gaps = 60/469 (12%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
TY+++IG N I+ A L+++M G+ V Y+ ++ + R + +D +V +LR
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKID-SVMLLRLY 257
Query: 139 AE---RGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 195
E L DV N +I F G+ AT S++ AL
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
R EA LF E+ + G+ P Y LL G A + EM +G PD
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD---- 373
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
TY+ LI R E A +L+ M + PN+ +S +++GF GE K +
Sbjct: 374 ----EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 316 ELKIETEDKAIWWLDEDTYDSLMDSLSYED----------------------TYSSVMND 353
++ E + + D Y+ ++D+ + T++++++
Sbjct: 430 QVLKEMKSIGV-KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488
Query: 354 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM 413
+ G A ++ M R G L Y+++IN + R + KR L + S G L
Sbjct: 489 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL-- 546
Query: 414 PSYTVYDILLENCSNS-EFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDG 472
P+ + L++ S F +E +++ L K
Sbjct: 547 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGL----------------------KPSS 584
Query: 473 GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDR 521
MYN LI + + +A N + M G P + ++ +LI+A +DR
Sbjct: 585 TMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDR 633
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%)
Query: 55 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 114
+ R + +++L MK +G+ + T+++++ + + + A L EM + G PS
Sbjct: 527 QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM 586
Query: 115 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 174
YN+L+ AY +R ++AV R M GL P + + N +I+ F
Sbjct: 587 YNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 646
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
+ G+ PD TY++LM+AL + + ++ EM+ G PD + L +A
Sbjct: 647 ENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSA 698
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 163/397 (41%), Gaps = 65/397 (16%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K LC++GRI EA M + +G+ TYSS+I FC + S L +MI G+
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 109 SPSVVTY-----------------------------------NSLVFAYCRRDSVDKAVG 133
P VV Y NSL+ +CR + D+A+
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 134 ILRAMAERGLSPDVDSYNRVI------SKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 187
+ R M G+ PDV ++ V+ FC I D A +
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 577
Query: 188 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 247
++ L R+ +A F ++ G + PD +TY ++ C + +A + + +
Sbjct: 578 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK--- 634
Query: 248 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQ 307
VT F P VT LIH LC + ++ A+ + M E G PNAV+Y ++ F +
Sbjct: 635 -----VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 689
Query: 308 IGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLD 367
++ +++L E ++K I S++ +YS +++ G + A +
Sbjct: 690 SVDIEGSFKLFEEMQEKGI-------SPSIV-------SYSIIIDGLCKRGRVDEATNIF 735
Query: 368 HDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY 404
H L VAY++LI G K R EA LLY
Sbjct: 736 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA--LLY 770
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 120/531 (22%), Positives = 214/531 (40%), Gaps = 58/531 (10%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C+ G + A + +VM+ +G+ D YS++I + + H L S+ + KG
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VV ++S + Y + + A + + M +G+SP+V +Y +I C
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ +G+ P TYSSL++ C L F L+ +M++ G PD + Y L++ G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
A +M+ + + +V +N+LI G C L+R +EAL++ R M G+
Sbjct: 476 LMLHAMRFSVKMLGQSIRLN--------VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 292 SPNAVSYSTVI------SGFCQ-----IGELGKAYELKIETEDKAIWWLDEDTYDSLMDS 340
P+ +++TV+ FC+ IG + ++L + A + L
Sbjct: 528 KPDVATFTTVMRVSIMEDAFCKHMKPTIGL--QLFDLMQRNKISADIAVCNVVIHLLFKC 585
Query: 341 LSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKR 400
ED S N+ L EG M+ V Y+ +I G R EA+R
Sbjct: 586 HRIEDA-SKFFNN-LIEGKME---------------PDIVTYNTMICGYCSLRRLDEAER 628
Query: 401 --DLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM 457
+LL + G P+ IL+ C N++ + + + + +A T M
Sbjct: 629 IFELLKVTPFG----PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 684
Query: 458 LHLKNKTDGENK-------TDGGM------YNLLIFEHCRSHNVHKAYNMYMEMVHYGHA 504
D E + G+ Y+++I C+ V +A N++ + +
Sbjct: 685 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL 744
Query: 505 PHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTK 555
P + + LI E + + + LR+ D + LSE N K
Sbjct: 745 PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPK 795
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/515 (22%), Positives = 204/515 (39%), Gaps = 69/515 (13%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
CR G + +A ++ G+ + + + ++ +++D ++ G PS
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216
Query: 113 VTYNSLVF--AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
V+ + V +C+ + V KA+ R + ERG + S N+V+ K
Sbjct: 217 VSAHGFVLDALFCKGE-VTKALDFHRLVMERGFRVGIVSCNKVL-KGLSVDQIEVASRLL 274
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
+D G P+ T+ +L+ C + AFDLF+ M + G+ PD + Y+ L++
Sbjct: 275 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTY 263
G L + +HKG D V G SP +VTY
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 264 NALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETED 323
LI GLC R+ EA + + + G+ P+ V+YS++I GFC+ G L + L E
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL-YEDMI 453
Query: 324 KAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 383
K + D Y L+D LS +G M A++ M + V ++
Sbjct: 454 KMGYPPDVVIYGVLVDGLS-------------KQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 384 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDI-----LLENCSNSEFKSLVEL- 437
LI+G + R EA + + G P + ++E+ K + L
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGI--KPDVATFTTVMRVSIMEDAFCKHMKPTIGLQ 558
Query: 438 VKDYSMRD-LSDDAATAHTTMLHL--------------KNKTDGENKTDGGMYNLLIFEH 482
+ D R+ +S D A + ++HL N +G+ + D YN +I +
Sbjct: 559 LFDLMQRNKISADIAVCN-VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 617
Query: 483 CRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
C + +A ++ + P+ ++ LI L
Sbjct: 618 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 652
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 169/413 (40%), Gaps = 86/413 (20%)
Query: 181 DAATYSSLMEALCVEQRLSEAFDL-----------------------------------F 205
DA LME C + +A ++ F
Sbjct: 145 DADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHF 204
Query: 206 REMLRGGVSPDELT-YTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYN 264
++ RGG+ P ++ + +L+A GE TKA H ++ + GF IV+ N
Sbjct: 205 DKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER--------GFRVGIVSCN 256
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
++ GL +D++E A +L + + G +PN V++ T+I+GFC+ GE+ +A++L E +
Sbjct: 257 KVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 325 AIWWLDEDTYDSLMDSLSYED----------------------TYSSVMNDYLAEGNMQR 362
I D Y +L+D +SS ++ Y+ G++
Sbjct: 316 GIEP-DLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLAT 374
Query: 363 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDIL 422
A + M G + V Y++LI GL + R EA I G PS Y L
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM--EPSIVTYSSL 432
Query: 423 LE---NCSN--SEFKSLVELVK-----DYSMRDLSDDAATAHTTMLH---LKNKTDGEN- 468
++ C N S F +++K D + + D + MLH K G++
Sbjct: 433 IDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492
Query: 469 KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM--FSVLALISALDD 519
+ + ++N LI CR + +A ++ M YG P + F+ + +S ++D
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMED 545
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 89/219 (40%), Gaps = 50/219 (22%)
Query: 13 KMALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQS-------------LKRLCREGRIP 59
KM ++ YN MI G+ + + E++++ E + + LC+ +
Sbjct: 602 KMEPDIVTYNTMICGYCSL--RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 659
Query: 60 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 119
A +M +M KG + TY ++ WF I+ + L EM KG SPS+V+Y+ ++
Sbjct: 660 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 719
Query: 120 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 179
C+R VD+A I + L PDV
Sbjct: 720 DGLCKRGRVDEATNIFHQAIDAKLLPDV-------------------------------- 747
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 218
Y+ L+ C RL EA L+ MLR GV PD+L
Sbjct: 748 ---VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 180/438 (41%), Gaps = 81/438 (18%)
Query: 81 SSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAE 140
S++I K+ A + A G+ +V +++L+ AY R ++A+ + +M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 141 RGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSE 200
GL P++ +YN VI DA + +
Sbjct: 297 YGLRPNLVTYNAVI--------------------------DACGKGGM--------EFKQ 322
Query: 201 AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAI 260
F EM R GV PD +T+ LL C G + A +L DEM ++ D +
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQD--------V 374
Query: 261 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIE 320
+YN L+ +C +++ A EIL MP + PN VSYSTVI GF + G +A L E
Sbjct: 375 FSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE 434
Query: 321 TEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYV 380
I +D +S Y+++++ Y G + AL + +M+ G V
Sbjct: 435 MRYLGI----------ALDRVS----YNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480
Query: 381 AYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSE-FKSLVELVK 439
Y+ L+ G K+ + E K+ + + L P+ Y L++ S +K +E+ +
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVL--PNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 440 DYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMV 499
++ L D +Y+ LI C++ V A ++ EM
Sbjct: 539 EFKSAGLRADVV----------------------LYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 500 HYGHAPHMFSVLALISAL 517
G +P++ + ++I A
Sbjct: 577 KEGISPNVVTYNSIIDAF 594
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 28/305 (9%)
Query: 17 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKR---------------LCREGRIPEA 61
N+ YN +I A GK E K+V + F ++R +C G + EA
Sbjct: 302 NLVTYNAVI----DACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 62 EQ-MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 120
+ + + M + + D +Y++++ C ++D A +L++M K P+VV+Y++++
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 121 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 180
+ + D+A+ + M G++ D SYN ++S + GI
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
D TY++L+ + + E +F EM R V P+ LTY+ L++ G + +A +
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
E G D +V Y+ALI LC V A+ ++ M + G+SPN V+Y++
Sbjct: 538 REFKSAGLRAD--------VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNS 589
Query: 301 VISGF 305
+I F
Sbjct: 590 IIDAF 594
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 150/343 (43%), Gaps = 27/343 (7%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKID--SAHTLLSEMIAKGFSPS 111
R G EA + MK GL + TY++VI C ++ EM G P
Sbjct: 280 RSGLHEEAISVFNSMKEYGLRPNLVTYNAVID-ACGKGGMEFKQVAKFFDEMQRNGVQPD 338
Query: 112 VVTYNSLVFAYCRRDSV-DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
+T+NSL+ A C R + + A + M R + DV SYN ++ C
Sbjct: 339 RITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
K I P+ +YS++++ R EA +LF EM G++ D ++Y LL+ V
Sbjct: 398 AQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKV 457
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
G +A + EM G D +VTYNAL+ G + +E ++ M
Sbjct: 458 GRSEEALDILREMASVGIKKD--------VVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 291 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 350
+ PN ++YST+I G+ + G +A E+ E + + D Y +L+D+L
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR-ADVVLYSALIDAL--------- 559
Query: 351 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 393
G + A+ L +M+++G + V Y+ +I+ + A
Sbjct: 560 ----CKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 142/348 (40%), Gaps = 64/348 (18%)
Query: 10 AALKMALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKR----------------LC 53
A++ + +V YN ++ G+ GK D E KKV F +KR
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQ-GKYD-EVKKV---FTEMKREHVLPNLLTYSTLIDGYS 525
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
+ G EA ++ K GL D YS++I C + SA +L+ EM +G SP+VV
Sbjct: 526 KGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVV 585
Query: 114 TYNSLVFAYCRRDSVDKAV----GILRAMAERGLSPDVDSY-NRVISKFCXXXXXXXXXX 168
TYNS++ A+ R ++D++ G + LS ++ NRVI F
Sbjct: 586 TYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTES---- 641
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ T E + Q LS ++FR+M + + P+ +T++ +LNAC
Sbjct: 642 ------------NNRTTKDCEEGM---QELSCILEVFRKMHQLEIKPNVVTFSAILNACS 686
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVE---EALEILRG 285
F A L +E+ + V G ++HGL R +A +
Sbjct: 687 RCNSFEDASMLLEEL---RLFDNKVYG----------VVHGLLMGQRENVWLQAQSLFDK 733
Query: 286 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIW---WLD 330
+ EM S + Y+ + G+ A + +E + +W W D
Sbjct: 734 VNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWSD 781
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 183/434 (42%), Gaps = 40/434 (9%)
Query: 21 YNGMIRGFATAAG--KSDS-----ESKKVGEAFQS----LKRLCREGRIPEAEQMLEVMK 69
YN ++ F A K +S E+ V Q+ +K C++ +A L+ M
Sbjct: 117 YNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMW 176
Query: 70 CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVD 129
+G D +YS+VI K+D A L EM +G +P V YN L+ + +
Sbjct: 177 KEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236
Query: 130 KAVGIL-RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 188
A+ + R + + + P+V ++N +IS D TYSSL
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 189 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 248
+ LC + +A +F E+ S D +TY +L C G+ ++ L M HK
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN- 355
Query: 249 LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQI 308
S IV+YN LI GL +++EA I R MP G + + +Y I G C
Sbjct: 356 --------SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 309 GELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDH 368
G + KA + E E LD Y S++D L + ++ A L
Sbjct: 408 GYVNKALGVMQEVESSG-GHLDVYAYASIIDCLC-------------KKKRLEEASNLVK 453
Query: 369 DMSRDGY-LSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-C 426
+MS+ G L+S+V + LI GL + +R EA L + +G P+ Y+IL+ C
Sbjct: 454 EMSKHGVELNSHVC-NALIGGLIRDSRLGEASFFLREMGKNG--CRPTVVSYNILICGLC 510
Query: 427 SNSEFKSLVELVKD 440
+F VK+
Sbjct: 511 KAGKFGEASAFVKE 524
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 162/377 (42%), Gaps = 47/377 (12%)
Query: 13 KMALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKG 72
K +++V YN M+ GF CR G+I E+ ++ +M+ K
Sbjct: 320 KASIDVVTYNTMLGGF------------------------CRCGKIKESLELWRIMEHKN 355
Query: 73 LFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAV 132
++ +Y+ +I KID A + M AKG++ TY + C V+KA+
Sbjct: 356 -SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKAL 414
Query: 133 GILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEAL 192
G+++ + G DV +Y +I C G+ ++ ++L+ L
Sbjct: 415 GVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGL 474
Query: 193 CVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDF 252
+ RL EA REM + G P ++Y L+ C G+F +A EM+ G+ PD
Sbjct: 475 IRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD- 533
Query: 253 VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELG 312
+ TY+ L+ GLC +++ ALE+ + GL + + ++ +I G C +G+L
Sbjct: 534 -------LKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLD 586
Query: 313 KAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSR 372
A + E + + + TY+++M + G+ RA + M +
Sbjct: 587 DAMTVMANMEHR--------------NCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYK 632
Query: 373 DGYLSSYVAYSVLINGL 389
G ++Y+ ++ GL
Sbjct: 633 MGLQPDIISYNTIMKGL 649
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 122/266 (45%), Gaps = 8/266 (3%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC G + +A +++ ++ G LD Y+S+I C +++ A L+ EM G +
Sbjct: 404 LCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELN 463
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
N+L+ R + +A LR M + G P V SYN +I C
Sbjct: 464 SHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVK 523
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
++ G PD TYS L+ LC ++++ A +L+ + L+ G+ D + + L++ C VG
Sbjct: 524 EMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVG 583
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+ A + M H+ + +VTYN L+ G + A I M +MGL
Sbjct: 584 KLDDAMTVMANMEHRNCTAN--------LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGL 635
Query: 292 SPNAVSYSTVISGFCQIGELGKAYEL 317
P+ +SY+T++ G C + A E
Sbjct: 636 QPDIISYNTIMKGLCMCRGVSYAMEF 661
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 202/476 (42%), Gaps = 45/476 (9%)
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
++M E+ C+ R+Y++++ F + +L + G +P++ TYN L+
Sbjct: 102 KRMREIFGCEPAI---RSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKM 158
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 181
C++ +KA G L M + G PDV SY+ VI+ ++G+ PD
Sbjct: 159 SCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPD 218
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREMLR-GGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
Y+ L++ E+ A +L+ +L V P+ T+ +++ G +
Sbjct: 219 VTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIW 278
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
+ M D + TY++LIHGLC V++A + + E S + V+Y+T
Sbjct: 279 ERMKQNEREKD--------LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNT 330
Query: 301 VISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM 360
++ GFC+ G++ ++ EL W + E + + ++ +SY + ++ L G +
Sbjct: 331 MLGGFCRCGKIKESLEL---------WRIME--HKNSVNIVSY----NILIKGLLENGKI 375
Query: 361 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI-ASDGFLSMPSY-TV 418
A + M GY + Y + I+GL +A + + +S G L + +Y ++
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASI 435
Query: 419 YDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD-----------GE 467
D L C + LVK+ S + ++ + + L + G+
Sbjct: 436 IDCL---CKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 468 NKTDGGM--YNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDR 521
N + YN+LI C++ +A EM+ G P + + L+ L DR
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDR 548
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 148/339 (43%), Gaps = 25/339 (7%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L + GR+ + ++ E MK D TYSS+I C+ +D A ++ +E+ + S
Sbjct: 265 LSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASID 324
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VVTYN+++ +CR + +++ + R M + S ++ SYN +I
Sbjct: 325 VVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWR 383
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
KG D TY + LCV +++A + +E+ G D Y +++ C
Sbjct: 384 LMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKK 443
Query: 232 EFTKAFHLHDEMIHKGF-LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
+A +L EM G L V NALI GL R+ EA LR M + G
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVC---------NALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 291 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 350
P VSY+ +I G C+ G+ G+A E + W D TY L+ L +
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG-WKPDLKTYSILLCGLCRDR----- 548
Query: 351 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 389
+ AL+L H + G + + +++LI+GL
Sbjct: 549 --------KIDLALELWHQFLQSGLETDVMMHNILIHGL 579
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/505 (21%), Positives = 206/505 (40%), Gaps = 58/505 (11%)
Query: 36 DSESKKVGEAFQS------LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCN 89
DS ++ G A + L+RL + +++E+++ + DE SVI +
Sbjct: 31 DSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGK 90
Query: 90 LNKIDSAHTLLSEMIAK-GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVD 148
+ D A + M G P++ +YN+L+ A+ K + G++P++
Sbjct: 91 NSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQ 150
Query: 149 SYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 208
+YN +I C +G PD +YS+++ L +L +A +LF EM
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEM 210
Query: 209 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 268
GV+PD Y L++ + A L D ++ + P + T+N +I
Sbjct: 211 SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLED-------SSVYPNVKTHNIMIS 263
Query: 269 GLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWW 328
GL RV++ L+I M + + +YS++I G C G + KA
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA-------------- 309
Query: 329 LDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 386
E ++ L + + D TY++++ + G ++ +L+L M ++ V+Y++LI
Sbjct: 310 --ESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVN-IVSYNILI 366
Query: 387 NGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRD 445
GL + + EA + + G+ + T Y I + C N + ++++
Sbjct: 367 KGLLENGKIDEATMIWRLMPAKGYAA--DKTTYGIFIHGLCVNGYVNKALGVMQEV---- 420
Query: 446 LSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 505
+++ H D Y +I C+ + +A N+ EM +G
Sbjct: 421 ---ESSGGHL---------------DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVEL 462
Query: 506 HMFSVLALISALDDDRMYNEMSWVI 530
+ ALI L D E S+ +
Sbjct: 463 NSHVCNALIGGLIRDSRLGEASFFL 487
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ G+ EA ++ M G D +TYS ++ C KID A L + + G
Sbjct: 509 LCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETD 568
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V+ +N L+ C +D A+ ++ M R + ++ +YN ++ F
Sbjct: 569 VMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWG 628
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
G+ PD +Y+++M+ LC+ + +S A + F + G+ P T+ L+ A
Sbjct: 629 YMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 120/310 (38%), Gaps = 49/310 (15%)
Query: 2 KLLRASFTAALKMALNVNIYNGMIRGFATAAGKSDSESKKVGE-----AFQSL-KRLCRE 55
+L+ A AA K + I+ + G+ A E + G A+ S+ LC++
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKK 442
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
R+ EA +++ M G+ L+ +++IG +++ A L EM G P+VV+Y
Sbjct: 443 KRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSY 502
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
N L+ C+ +A ++ M E G PD+ +Y+ ++ C +
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ 562
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFD-------------------------------- 203
G+ D ++ L+ LC +L +A
Sbjct: 563 SGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNR 622
Query: 204 ---LFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAI 260
++ M + G+ PD ++Y ++ C+ + A D+ + G P +
Sbjct: 623 ATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIF--------PTV 674
Query: 261 VTYNALIHGL 270
T+N L+ +
Sbjct: 675 YTWNILVRAV 684
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 9/271 (3%)
Query: 48 SLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK- 106
+++ LC GR+ EA+ +++ + K D TY+ ++ C + + + EM
Sbjct: 165 AVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF 224
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
P +V++ L+ C ++ +A+ ++ + G PD YN ++ FC
Sbjct: 225 DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEA 284
Query: 167 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
++G+ PD TY++L+ L R+ EA + M+ G PD TYT L+N
Sbjct: 285 VGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNG 344
Query: 227 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 286
C GE A L +EM +G P+ TYN L+HGLC +++ +E+ M
Sbjct: 345 MCRKGESLGALSLLEEMEARGCAPN--------DCTYNTLLHGLCKARLMDKGMELYEMM 396
Query: 287 PEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
G+ + Y+T++ + G++ +AYE+
Sbjct: 397 KSSGVKLESNGYATLVRSLVKSGKVAEAYEV 427
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 134/307 (43%), Gaps = 23/307 (7%)
Query: 93 IDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNR 152
I + H +L+ M+ G P VT + V + C VD+A +++ + E+ PD +YN
Sbjct: 140 ISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNF 199
Query: 153 VISKFCXXXXXXXXXXXXXXXVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 211
++ C D + PD +++ L++ +C + L EA L ++
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNA 259
Query: 212 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 271
G PD Y ++ C + + ++A ++ +M +G PD +TYN LI GL
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD--------QITYNTLIFGLS 311
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDE 331
RVEEA L+ M + G P+ +Y+++++G C+ GE A L E E + D
Sbjct: 312 KAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPND- 370
Query: 332 DTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 391
TY+++++ M + ++L M G Y+ L+ L K
Sbjct: 371 -------------CTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVK 417
Query: 392 KARTREA 398
+ EA
Sbjct: 418 SGKVAEA 424
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 89/200 (44%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
+C + EA ++ + G D Y++++ FC L+K A + +M +G P
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+TYN+L+F + V++A L+ M + G PD +Y +++ C
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLE 359
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+G P+ TY++L+ LC + + + +L+ M GV + Y L+ + G
Sbjct: 360 EMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSG 419
Query: 232 EFTKAFHLHDEMIHKGFLPD 251
+ +A+ + D + L D
Sbjct: 420 KVAEAYEVFDYAVDSKSLSD 439
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K C + EA + + MK +G+ D+ TY+++I +++ A L M+ G+
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY 331
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P TY SL+ CR+ A+ +L M RG +P+ +YN ++ C
Sbjct: 332 EPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGME 391
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLF 205
G+ ++ Y++L+ +L +++EA+++F
Sbjct: 392 LYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/378 (19%), Positives = 138/378 (36%), Gaps = 59/378 (15%)
Query: 198 LSEAFDLFREMLRGGVS--PDELTYTRLLNACCLVGE--FTKAFHLHDEMIHKGFLPDFV 253
+++ LF+ +L+ + P T+ LL+ C + + + + M++ G PD
Sbjct: 101 VNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPD-- 158
Query: 254 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGK 313
VT + + LC RV+EA ++++ + E P+ +Y+ ++ C+ +L
Sbjct: 159 ------QVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV 212
Query: 314 AYELKIETEDKAIWWLDEDTYDSLMDSLSYEDT----------------------YSSVM 351
YE E D D ++ L+D++ Y+++M
Sbjct: 213 VYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIM 272
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
+ A+ + M +G + Y+ LI GL K R EA+ L + G+
Sbjct: 273 KGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY- 331
Query: 412 SMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT 470
P Y L+ C E + L+++ R + + T
Sbjct: 332 -EPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCT------------------ 372
Query: 471 DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVI 530
YN L+ C++ + K +Y M G L+ +L E V
Sbjct: 373 ----YNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Query: 531 NNTLRSCNLSDSEQLKVL 548
+ + S +LSD+ L
Sbjct: 429 DYAVDSKSLSDASAYSTL 446
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 100/206 (48%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L+ LC G+ EA +ML + KG+ D Y++V L +I H L +M G
Sbjct: 414 LESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGP 473
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
SP + TYN L+ ++ R VD+A+ I + PD+ SYN +I+
Sbjct: 474 SPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHV 533
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+KG+ PD TYS+LME +R+ A+ LF EML G P+ +TY LL+
Sbjct: 534 RFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLE 593
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVT 254
G +A L+ +M +G PD +T
Sbjct: 594 KNGRTAEAVDLYSKMKQQGLTPDSIT 619
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 164/373 (43%), Gaps = 58/373 (15%)
Query: 60 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 119
+A Q+ E MK + DE TY+ +I + K D A L +EMI +G + +VV YN+L+
Sbjct: 253 KACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLM 312
Query: 120 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX---XXXXXXXXVDK 176
+ VDKA+ + M E G P+ +Y+ +++ + +
Sbjct: 313 QVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQ 372
Query: 177 GI--------------------------FP---DAATYSSLMEALCVEQRLSEAFDLFRE 207
GI FP + +Y S++E+LC + EA ++ +
Sbjct: 373 GIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSK 432
Query: 208 MLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD--EMIHKGFLPDFVTGFSPAIVTYNA 265
+ GV D + Y + +A +G+ + H+HD E + K G SP I TYN
Sbjct: 433 IHEKGVVTDTMMYNTVFSA---LGKLKQISHIHDLFEKMKKD-------GPSPDIFTYNI 482
Query: 266 LIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKA 325
LI + V+EA+ I + P+ +SY+++I+ + G++ +A+ E ++K
Sbjct: 483 LIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKG 542
Query: 326 IWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 385
L+ D TYS++M + ++ A L +M G + V Y++L
Sbjct: 543 ---LNPDVV-----------TYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNIL 588
Query: 386 INGLHKKARTREA 398
++ L K RT EA
Sbjct: 589 LDCLEKNGRTAEA 601
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 132/323 (40%), Gaps = 38/323 (11%)
Query: 14 MALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRL----CR--------------- 54
+ LNV YN +++ A + K V +A Q R+ CR
Sbjct: 301 LTLNVVGYNTLMQVLA--------KGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVA 352
Query: 55 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 114
EG++ + ++E+ K ++ + YS ++ L + AH L +M + +
Sbjct: 353 EGQLVRLDGVVEISK---RYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDS 409
Query: 115 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 174
Y S++ + C +A+ +L + E+G+ D YN V S
Sbjct: 410 YMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK 469
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 234
G PD TY+ L+ + + EA ++F E+ R PD ++Y L+N G+
Sbjct: 470 KDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVD 529
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
+A EM KG PD +VTY+ L+ +RVE A + M G PN
Sbjct: 530 EAHVRFKEMQEKGLNPD--------VVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPN 581
Query: 295 AVSYSTVISGFCQIGELGKAYEL 317
V+Y+ ++ + G +A +L
Sbjct: 582 IVTYNILLDCLEKNGRTAEAVDL 604
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L + G + EA + M+ KGL D TYS+++ F +++ A++L EM+ KG P+
Sbjct: 522 LGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPN 581
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSY 150
+VTYN L+ + +AV + M ++GL+PD +Y
Sbjct: 582 IVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITY 620
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 170/438 (38%), Gaps = 86/438 (19%)
Query: 115 YNSLVFAYCRR---DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
YN ++ R D D+ IL +M + + ++ + N +I F
Sbjct: 136 YNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFF----GNTEDLQMCL 191
Query: 172 XXVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA---- 226
V K + ++ TY L++A + S+AFD++ E+ RGG D Y LL+A
Sbjct: 192 RLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD 251
Query: 227 --CCLVGEFTKAFHL-HDEMIHK----------------GFLPDFVT-GFSPAIVTYNAL 266
C V E K H DE + G + +T G + +V YN L
Sbjct: 252 EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTL 311
Query: 267 IHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAI 326
+ L V++A+++ M E G PN +YS +++ G+L + + +E +
Sbjct: 312 MQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGV-VEISKR-- 368
Query: 327 WWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDM-------SRDGYLSSY 379
++ + Y L+ +LS G++ A +L DM RD Y+S
Sbjct: 369 -YMTQGIYSYLVRTLS-------------KLGHVSEAHRLFCDMWSFPVKGERDSYMS-- 412
Query: 380 VAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVK 439
++ L +T EA L I G V D ++ N S L ++
Sbjct: 413 -----MLESLCGAGKTIEAIEMLSKIHEKG-------VVTDTMMYNTVFSALGKLKQI-- 458
Query: 440 DYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMV 499
+H L K K DG + D YN+LI R V +A N++ E+
Sbjct: 459 -------------SHIHDLFEKMKKDGPS-PDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 500 HYGHAPHMFSVLALISAL 517
P + S +LI+ L
Sbjct: 505 RSDCKPDIISYNSLINCL 522
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 161/352 (45%), Gaps = 23/352 (6%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K C EG EA + M+ KG+ + Y++++ + N I+ L +EM KG
Sbjct: 351 VKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGL 410
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
PS TYN L+ AY RR D +LR M + GL P+V SY +IS +
Sbjct: 411 KPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAA 470
Query: 169 XXXXXVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
+ K G+ P + +Y++L+ A V +A+ F EM + G+ P TYT +L+A
Sbjct: 471 DAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAF 530
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
G+ K I K L + + G +TYN L+ G EA +++
Sbjct: 531 RRSGDTGKLME-----IWKLMLREKIKG---TRITYNTLLDGFAKQGLYIEARDVVSEFS 582
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 347
+MGL P+ ++Y+ +++ + + G+ K +L ++ A L D+ TY
Sbjct: 583 KMGLQPSVMTYNMLMNAYARGGQDAKLPQL---LKEMAALNLKPDSI-----------TY 628
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 399
S+++ ++ + +RA M + G + +Y L L KA+T+ K
Sbjct: 629 STMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNRK 680
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 158/388 (40%), Gaps = 64/388 (16%)
Query: 63 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 122
Q+ VM G+ + T++ + FCN + L +M +GF P +VTYN+LV +Y
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 123 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 182
CRR + +A + + M R + PD+ +Y +I C VD+GI PD
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 183 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYT----------RLLNAC----- 227
+Y++L+ A C E + ++ L EML V PD T RLL+A
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVE 401
Query: 228 --------------------CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALI 267
C G+ A HL D +I + G TYN LI
Sbjct: 402 LRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEE-------EGHEAKPETYNNLI 454
Query: 268 HGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIW 327
L D +EEAL + + +A +Y +I C+IG +A L E D +
Sbjct: 455 ESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVK 514
Query: 328 W---------------LDEDTYDSLMDSLSYE------DTYSSVMNDYLAEG-NMQRALQ 365
LD D + L+ + E ++Y+S++ G ++AL+
Sbjct: 515 PDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALE 574
Query: 366 LDHDMSRDGYLSSYVAYSVLINGLHKKA 393
L M R G++ + + LI L + +
Sbjct: 575 LQERMQRLGFVPNRLTCKYLIQVLEQPS 602
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 144/347 (41%), Gaps = 32/347 (9%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
D + ++ + L ++ + E++ GFS SVVT N L+ + D ++ +
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 195
M G+ P+ ++N + + FC ++G PD TY++L+ + C
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
RL EAF L++ M R V PD +TYT L+ C G +A M+ +G PD
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPD---- 340
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
++YN LI+ C ++++ ++L M + P+ + ++ GF + G L A
Sbjct: 341 ----CMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAV 396
Query: 316 ELKIETEDKAIWWLDEDTYDSLMDSLSYE-----------------------DTYSSVMN 352
+E + + + D L+ SL E +TY++++
Sbjct: 397 NFVVELRRLKV-DIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIE 455
Query: 353 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 399
++ AL L + + Y LI L + R REA+
Sbjct: 456 SLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAE 502
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 1/145 (0%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
++ L R I EA + +K + LD +TY ++IG C + + A +L++EM
Sbjct: 454 IESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEV 513
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P +LV+ YC+ DKA +L A D +SYN ++ C
Sbjct: 514 KPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKAL 573
Query: 169 XXXXXVDK-GIFPDAATYSSLMEAL 192
+ + G P+ T L++ L
Sbjct: 574 ELQERMQRLGFVPNRLTCKYLIQVL 598
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 175/393 (44%), Gaps = 31/393 (7%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L GR EA + + +G TY++++ S +L+S++ G P
Sbjct: 329 LIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPD 388
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+ +N+++ A ++D+A+ I M E G P ++N +I +
Sbjct: 389 TILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLD 448
Query: 172 XXV-DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
+ D+ + P+ T + L++A C ++++ EA+++ +M GV PD +T+ L A +
Sbjct: 449 MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARI 508
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
G A ++MI L + V P + T +++G C ++EEAL M E+G
Sbjct: 509 GSTCTA----EDMIIPRMLHNKV---KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELG 561
Query: 291 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED---TY 347
+ PN ++++I GF I ++ E+ LM+ + T+
Sbjct: 562 VHPNLFVFNSLIKGFLNINDMDGVGEVV-----------------DLMEEFGVKPDVVTF 604
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 407
S++MN + + G+M+R ++ DM G A+S+L G + +A++ L +
Sbjct: 605 STLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRK 664
Query: 408 DGFLSMPSYTVYDILLEN-CSNSEFKSLVELVK 439
G P+ +Y ++ CS E K +++ K
Sbjct: 665 FGV--RPNVVIYTQIISGWCSAGEMKKAMQVYK 695
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 141/288 (48%), Gaps = 17/288 (5%)
Query: 36 DSESKKVGEAFQSL-KRLCREGRIPEAEQMLEVM-KCKGLFLDERTYSSVIGWFCNLNKI 93
+S K F +L K + G++ E+ ++L++M + + L ++RT + ++ +CN KI
Sbjct: 417 ESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKI 476
Query: 94 DSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVG-ILRAMAERGLSPDVDSYNR 152
+ A ++ +M + G P VVT+N+L AY R S A I+ M + P+V +
Sbjct: 477 EEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGT 536
Query: 153 VISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL---SEAFDLFREML 209
+++ +C + G+ P+ ++SL++ + E DL E
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF- 595
Query: 210 RGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHG 269
GV PD +T++ L+NA VG+ + ++ +M+ G PD I ++ L G
Sbjct: 596 --GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPD--------IHAFSILAKG 645
Query: 270 LCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
E+A +IL M + G+ PN V Y+ +ISG+C GE+ KA ++
Sbjct: 646 YARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQV 693
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 7/232 (3%)
Query: 78 RTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRA 137
RT +++ +C K++ A M G P++ +NSL+ + + +D ++
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 591
Query: 138 MAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQR 197
M E G+ PDV +++ +++ + ++ GI PD +S L +
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 198 LSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS 257
+A + +M + GV P+ + YT++++ C GE KA ++ +M + G S
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCG-------IVGLS 704
Query: 258 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG 309
P + TY LI G + +A E+L+ M + P + + G+ IG
Sbjct: 705 PNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 184/416 (44%), Gaps = 39/416 (9%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L GR EA+ + + + G +Y++++ + S +++SE+ G
Sbjct: 55 LIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLD 114
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+ +N+++ A+ +++ AV L M E GL+P +YN +I +
Sbjct: 115 SIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 172 XXVDKG---IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+++G + P+ T++ L++A C ++++ EA+++ ++M GV PD +TY +
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYV 234
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
GE +A E++ K + + P T ++ G C RV + L +R M E
Sbjct: 235 QKGETVRA---ESEVVEKMVMKEKA---KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYD---SLMDSLSYED 345
M + N V ++++I+GF ++ +D D D +LM + +
Sbjct: 289 MRVEANLVVFNSLINGFVEV--------------------MDRDGIDEVLTLMKECNVKA 328
Query: 346 ---TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL 402
TYS+VMN + + G M++A Q+ +M + G AYS+L G R +E K+
Sbjct: 329 DVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY---VRAKEPKKAE 385
Query: 403 LYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM 457
+ + S P+ ++ ++ CSN + + +S + T T M
Sbjct: 386 ELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 441
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 150/333 (45%), Gaps = 32/333 (9%)
Query: 7 SFTAALKM---ALN--VNIYNGMIRGFATAAGKSDSESK-----------KVGEAFQSLK 50
+ A LKM LN + YN +I+G+ A GK + S+ VG ++
Sbjct: 134 AVQALLKMKELGLNPTTSTYNTLIKGYGIA-GKPERSSELLDLMLEEGNVDVGPNIRTFN 192
Query: 51 RL----CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHT-LLSEMIA 105
L C++ ++ EA ++++ M+ G+ D TY+++ + + A + ++ +M+
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 106 K-GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX 164
K P+ T +V YCR V + +R M E + ++ +N +I+ F
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 165 XXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLL 224
+ + D TYS++M A + +A +F+EM++ GV PD Y+ L
Sbjct: 313 GIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILA 372
Query: 225 NACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 284
E KA L + +I + P +V + +I G C +++A+ +
Sbjct: 373 KGYVRAKEPKKAEELLETLIVES---------RPNVVIFTTVISGWCSNGSMDDAMRVFN 423
Query: 285 GMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
M + G+SPN ++ T++ G+ ++ + KA E+
Sbjct: 424 KMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 456
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 119/279 (42%), Gaps = 17/279 (6%)
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
+V + L+ R +A + + +AE G P + SY +++
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
G D+ +++++ A + +A +M G++P TY L+ +
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
G+ ++ L D M+ +G + P I T+N L+ C +VEEA E+++ M E G
Sbjct: 164 GKPERSSELLDLMLEEGNV-----DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECG 218
Query: 291 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 350
+ P+ V+Y+T+ + + Q GE +A + E +K + + E + T V
Sbjct: 219 VRPDTVTYNTIATCYVQKGETVRA---ESEVVEKMV--MKEKAKPN-------GRTCGIV 266
Query: 351 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 389
+ Y EG ++ L+ M ++ V ++ LING
Sbjct: 267 VGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 11/279 (3%)
Query: 55 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 114
G + +A ++ + + G+ + R+Y+ ++ FC + + A+ L +M+ + P V +
Sbjct: 168 RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 115 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 174
Y L+ +CR+ V+ A+ +L M +G PD SY +++ C
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 234
KG PD Y++++ C E R +A + +ML G SP+ ++Y L+ C G F
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD 347
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
+ +EMI KGF P F N L+ G C +VEEA +++ + + G + +
Sbjct: 348 EGKKYLEEMISKGFSPHFSVS--------NCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399
Query: 295 AVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDT 333
+ ++ VI C E + ++K+ ED + DT
Sbjct: 400 SDTWEMVIPLICNEDE---SEKIKLFLEDAVKEEITGDT 435
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 136/313 (43%), Gaps = 20/313 (6%)
Query: 93 IDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNR 152
+ A L G P+ +YN L+ A+C D + A + M ER + PDVDSY
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 153 VISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGG 212
+I FC ++KG PD +Y++L+ +LC + +L EA+ L M G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 213 VSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCF 272
+PD + Y ++ C A + D+M+ G SP V+Y LI GLC
Sbjct: 291 CNPDLVHYNTMILGFCREDRAMDARKVLDDMLS--------NGCSPNSVSYRTLIGGLCD 342
Query: 273 LDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDED 332
+E + L M G SP+ + ++ GFC G++ +A ++ +E K L D
Sbjct: 343 QGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDV-VEVVMKNGETLHSD 401
Query: 333 TYDSLMDSLSYEDTYSSV---MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 389
T++ ++ + ED + + D + E +D + YLSS +
Sbjct: 402 TWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGIGLGSYLSSKLQM------- 454
Query: 390 HKKARTREAKRDL 402
K+ RE +R L
Sbjct: 455 -KRKNARERRRHL 466
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 102 EMIAKGFSPSVVTYNSLV-FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXX 160
+M+ F+P N ++ R + KA + ++ G+ P+ SYN ++ FC
Sbjct: 144 KMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLN 203
Query: 161 XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTY 220
+++ + PD +Y L++ C + +++ A +L +ML G PD L+Y
Sbjct: 204 DDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSY 263
Query: 221 TRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEAL 280
T LLN+ C + +A+ L M KG PD +V YN +I G C DR +A
Sbjct: 264 TTLLNSLCRKTQLREAYKLLCRMKLKGCNPD--------LVHYNTMILGFCREDRAMDAR 315
Query: 281 EILRGMPEMGLSPNAVSYSTVISGFCQIG--ELGKAY 315
++L M G SPN+VSY T+I G C G + GK Y
Sbjct: 316 KVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKY 352
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 144/348 (41%), Gaps = 65/348 (18%)
Query: 98 TLLSEMIAK----GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRV 153
L+ +++AK G+ + + L+ Y +K + M E +P NR+
Sbjct: 101 NLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRI 160
Query: 154 ISKFCXXXXXXXXXXXXXXXVD-KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGG 212
+ G+ P+ +Y+ LM+A C+ LS A+ LF +ML
Sbjct: 161 LDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERD 220
Query: 213 VSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCF 272
V PD +Y L+ C G+ A L D+M++KGF+ P ++Y L++ LC
Sbjct: 221 VVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFV--------PDRLSYTTLLNSLCR 272
Query: 273 LDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDED 332
++ EA ++L M G +P+ V Y+T+I GFC+ ED+A
Sbjct: 273 KTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCR--------------EDRA------- 311
Query: 333 TYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKK 392
MD+ D DM +G + V+Y LI GL +
Sbjct: 312 -----MDARKVLD-----------------------DMLSNGCSPNSVSYRTLIGGLCDQ 343
Query: 393 ARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVK 439
E K+ L + S GF P ++V + L++ CS + + ++V+
Sbjct: 344 GMFDEGKKYLEEMISKGF--SPHFSVSNCLVKGFCSFGKVEEACDVVE 389
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
++ CR+G++ A ++L+ M KG D +Y++++ C ++ A+ LL M KG
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGC 291
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
+P +V YN+++ +CR D A +L M G SP+ SY +I C
Sbjct: 292 NPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKK 351
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ KG P + + L++ C ++ EA D+ +++ G + T+ ++ C
Sbjct: 352 YLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 133/580 (22%), Positives = 239/580 (41%), Gaps = 73/580 (12%)
Query: 51 RLCREGRIPEAEQMLEVMK-CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS 109
+LC R Q+L+ M GL D+ + ++I F I +++ + G
Sbjct: 85 KLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIK 144
Query: 110 PSVVTYNSLVFAYCRRDSVDKAVGIL-RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
PS+ +NS++ + D +D A R M G+ DV +Y ++
Sbjct: 145 PSLKVFNSILDVLVKED-IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFK 203
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
G+ P+A Y++L+ ALC ++ A L EM P+++T+ L++A C
Sbjct: 204 LLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM----KEPNDVTFNILISAYC 259
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
+ ++ L ++ GF+PD +VT ++ LC RV EALE+L +
Sbjct: 260 NEQKLIQSMVLLEKCFSLGFVPD--------VVTVTKVMEVLCNEGRVSEALEVLERVES 311
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
G + V+ +T++ G+C +G++ A IE E K L +TY+
Sbjct: 312 KGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGY--------------LPNVETYN 357
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD 408
++ Y G + AL +DM D ++ ++ LI GL RT + + L +
Sbjct: 358 LLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDS 417
Query: 409 GFLSMPSYTVYDILL-----ENCSNSEFKSLVELVK------DYSMRDLS-------DDA 450
+ Y+ ++ EN + L+++ K D S + +S DD
Sbjct: 418 DTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDL 477
Query: 451 ATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSH------NVHKAYNMYMEMVHYGHA 504
TA+ M+ GE GG+ ++++ HC H + ++ + +MV G+
Sbjct: 478 KTAYDQMI-------GE----GGVPSIIV-SHCLIHRYSQHGKIEESLELINDMVTRGYL 525
Query: 505 PHMFSVLALISAL-DDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLD 563
P + A+I D++ N + +V + R C + D+E L E K +I
Sbjct: 526 PRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGC-VPDTESYNPLLEELCVKGDIQKAWL 584
Query: 564 VLAEMAMDSLLLDGGK------CSYAPASRHVHFSAATII 597
+ + M S++ D C + HV+ S II
Sbjct: 585 LFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSLQDII 624
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 178/438 (40%), Gaps = 36/438 (8%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K L RI + ++L++MK G+ + Y++++ C K+ A +L+SEM
Sbjct: 189 MKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK---- 244
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P+ VT+N L+ AYC + +++ +L G PDV + +V+ C
Sbjct: 245 EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALE 304
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
KG D ++L++ C ++ A F EM R G P+ TY L+ C
Sbjct: 305 VLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYC 364
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
VG A ++M +F T+N LI GL R ++ L+IL M +
Sbjct: 365 DVGMLDSALDTFNDMKTDAIRWNF--------ATFNTLIRGLSIGGRTDDGLKILEMMQD 416
Query: 289 MGLSPNAV--SYSTVISGFCQIGELGKAYELKIETED----------KAIWWLDEDTYDS 336
A Y+ VI GF + A E ++ E K I ++ D
Sbjct: 417 SDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDD 476
Query: 337 LM---DSLSYEDTYSSV------MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 387
L D + E S+ ++ Y G ++ +L+L +DM GYL ++ +I
Sbjct: 477 LKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVII 536
Query: 388 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDL 446
G K+ + + + +A G +P Y+ LLE C + + L + +
Sbjct: 537 GFCKQDKVMNGIKFVEDMAERG--CVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSI 594
Query: 447 SDDAATAHTTMLHLKNKT 464
D + + M L KT
Sbjct: 595 VPDPSMWSSLMFCLSQKT 612
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 151/377 (40%), Gaps = 64/377 (16%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG-GVSPDELTYT-------------R 222
G +TY +L LCV +R + L EM G+ PD+ + R
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 223 LLNACCLVGEF-----TKAFH-------LHDEMIHKGFLPD--FVTGFSPAIVTYNALIH 268
+++ LV +F K F+ D I + F +G + TY L+
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMK 190
Query: 269 GLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWW 328
GL +R+ + ++L+ M G++PNAV Y+T++ C+ G++G+A L E ++
Sbjct: 191 GLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEP---- 246
Query: 329 LDEDTYDSLMDSLSYED----------------------TYSSVMNDYLAEGNMQRALQL 366
++ T++ L+ + E T + VM EG + AL++
Sbjct: 247 -NDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEV 305
Query: 367 DHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN- 425
+ G VA + L+ G + R A+R + + G+L P+ Y++L+
Sbjct: 306 LERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYL--PNVETYNLLIAGY 363
Query: 426 CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRS 485
C S ++ D + + AT +T + L +TD G+ L + + S
Sbjct: 364 CDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIG----GRTDDGLKILEMMQD--S 417
Query: 486 HNVHKAYNMYMEMVHYG 502
VH A V YG
Sbjct: 418 DTVHGARIDPYNCVIYG 434
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 152/352 (43%), Gaps = 49/352 (13%)
Query: 49 LKRLCREGRIPEAEQMLEVMKC---KGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIA 105
+K + GR+ + +MLE M+ + DE TY++V+ F N +D A +L+EM
Sbjct: 421 MKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMAR 480
Query: 106 KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 165
G + +TYN L+ YC++ +D+A +LR M E
Sbjct: 481 MGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTE------------------------- 515
Query: 166 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
D GI PD +Y+ +++ + + A F EM G++P +++YT L+
Sbjct: 516 ---------DAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMK 566
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 285
A + G+ A + DEM++ + ++ +N L+ G C L +E+A ++
Sbjct: 567 AFAMSGQPKLANRVFDEMMNDPRV-------KVDLIAWNMLVEGYCRLGLIEDAQRVVSR 619
Query: 286 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 345
M E G PN +Y ++ +G Q + G A L E +++ E DS D
Sbjct: 620 MKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPML 679
Query: 346 TYSSVMNDYLAE-----GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKK 392
+ D LA+ ++AL++ M +G + Y + +H +
Sbjct: 680 KPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSR 731
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 167/370 (45%), Gaps = 26/370 (7%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
CREG++ EA+++L MK GL D +++++ + + K+ A+ L+++M +GF P+V
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306
Query: 113 VTYNSLVFAYCRRDS-VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
Y L+ A CR + +D+A+ + M G D+ +Y +IS FC
Sbjct: 307 NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 366
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
KG+ P TY +M A +++ E +L +M R G PD L Y ++ C +G
Sbjct: 367 DMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLG 426
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
E +A L +EM G SP + T+ +I+G + EA + M G+
Sbjct: 427 EVKEAVRLWNEM--------EANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Query: 292 --SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 349
+P + ++++ + +L A K +W + S ++S ++
Sbjct: 479 FSAPQYGTLKSLLNNLVRDDKLEMA---------KDVWSCISNKTSSCELNVS---AWTI 526
Query: 350 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK---KARTREAKRDLLYIA 406
++ A+G+++ A DM + Y+ L+ GL+K + E ++ +A
Sbjct: 527 WIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMA 586
Query: 407 SDGFLSMPSY 416
S+ +S Y
Sbjct: 587 SEREMSFKMY 596
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 164/379 (43%), Gaps = 39/379 (10%)
Query: 69 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT---YNSLVFAYCRR 125
K G F S++ + + + L+ EM + +P ++ + L+ +
Sbjct: 123 KQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEM--RKTNPELIEPELFVVLMRRFASA 180
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
+ V KAV +L M + GL PD + ++ C +K P+ +
Sbjct: 181 NMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYF 239
Query: 186 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
+SL+ C E +L EA ++ +M G+ PD + +T LL+ G+ A+ L ++M
Sbjct: 240 TSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRK 299
Query: 246 KGFLPDFVTGFSPAIVTYNALIHGLCFLD-RVEEALEILRGMPEMGLSPNAVSYSTVISG 304
+GF P+ + Y LI LC + R++EA+ + M G + V+Y+ +ISG
Sbjct: 300 RGFEPN--------VNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISG 351
Query: 305 FCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRAL 364
FC+ G + K Y + LD+ +M S + TY +M + + + L
Sbjct: 352 FCKWGMIDKGYSV-----------LDDMRKKGVMPS---QVTYMQIMVAHEKKEQFEECL 397
Query: 365 QLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKR-------DLLYIASDGFLSMPS-Y 416
+L M R G + Y+V+I K +EA R + L D F+ M + +
Sbjct: 398 ELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGF 457
Query: 417 TVYDILLENCSNSEFKSLV 435
T L+E C++ FK +V
Sbjct: 458 TSQGFLIEACNH--FKEMV 474
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 144/331 (43%), Gaps = 47/331 (14%)
Query: 188 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 247
LM + +A ++ EM + G+ PDE + LL+A C G +A + ++M K
Sbjct: 173 LMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK- 231
Query: 248 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQ 307
F P + + +L++G C ++ EA E+L M E GL P+ V ++ ++SG+
Sbjct: 232 --------FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAH 283
Query: 308 IGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLD 367
G++ AY+L + + + + + Y L+ +L E M A+++
Sbjct: 284 AGKMADAYDLMNDMRKRG-FEPNVNCYTVLIQALCR------------TEKRMDEAMRVF 330
Query: 368 HDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY-DILLENC 426
+M R G + V Y+ LI+G K + L + G MPS Y I++ +
Sbjct: 331 VEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV--MPSQVTYMQIMVAHE 388
Query: 427 SNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSH 486
+F+ +EL++ R H +L +YN++I C+
Sbjct: 389 KKEQFEECLELIEKMKRRG-------CHPDLL---------------IYNVVIRLACKLG 426
Query: 487 NVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
V +A ++ EM G +P + + + +I+
Sbjct: 427 EVKEAVRLWNEMEANGLSPGVDTFVIMINGF 457
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 138/322 (42%), Gaps = 30/322 (9%)
Query: 17 NVNIYNGMIRGFATAAGKSDS-----ESKKVGEAFQS--------LKRLCR-EGRIPEAE 62
++ ++ ++ G+A A +D+ + +K G F+ ++ LCR E R+ EA
Sbjct: 270 DIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG--FEPNVNCYTVLIQALCRTEKRMDEAM 327
Query: 63 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 122
++ M+ G D TY+++I FC ID +++L +M KG PS VTY ++ A+
Sbjct: 328 RVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAH 387
Query: 123 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 182
+++ ++ + ++ M RG PD+ YN VI C G+ P
Sbjct: 388 EKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGV 447
Query: 183 ATYSSLMEALCVEQRLSEAFDLFREMLRGGV--SPDELTYTRLLNACCLVGEFTKAFHLH 240
T+ ++ + L EA + F+EM+ G+ +P T LLN + A +
Sbjct: 448 DTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVW 507
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
+ +K + + + IH L V+EA M EM L P +Y+
Sbjct: 508 SCISNK------TSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAK 561
Query: 301 VISGFCQIGELGKAYELKIETE 322
++ G L K Y I E
Sbjct: 562 LMKG------LNKLYNRTIAAE 577
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 127/277 (45%), Gaps = 11/277 (3%)
Query: 52 LCREGRIPEAEQ-MLEVMKCKGLFLD--ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+C G A+Q +++ MK K + +Y++++ + + + +M+ GF
Sbjct: 191 ICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGF 250
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
SP V+TYN L++ R +D+ + MA G SPD +YN ++
Sbjct: 251 SPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALT 310
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ GI P Y++L++ L L EM++ G PD + YT ++
Sbjct: 311 TLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYV 370
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
+ GE KA + EM KG LP+ + TYN++I GLC EA +L+ M
Sbjct: 371 VSGELDKAKEMFREMTVKGQLPN--------VFTYNSMIRGLCMAGEFREACWLLKEMES 422
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKA 325
G +PN V YST++S + G+L +A ++ E K
Sbjct: 423 RGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 103/241 (42%), Gaps = 16/241 (6%)
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
+QMLE G D TY+ ++ L K+D L EM GFSP TYN L+
Sbjct: 243 KQMLE----DGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHI 298
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 181
+ + A+ L M E G+ P V Y +I V G PD
Sbjct: 299 LGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPD 358
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 241
Y+ ++ V L +A ++FREM G P+ TY ++ C+ GEF +A L
Sbjct: 359 VVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLK 418
Query: 242 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG----LSPNAVS 297
EM +G P+F V Y+ L+ L ++ EA +++R M + G L P +
Sbjct: 419 EMESRGCNPNF--------VVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMK 470
Query: 298 Y 298
Y
Sbjct: 471 Y 471
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 134/334 (40%), Gaps = 28/334 (8%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
+Y ++ F + + L+ EM+ GF + T+N L+ + +AV
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
P SYN +++ ++ G PD TY+ L L RL
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNIL---LWTNYRL 267
Query: 199 S--EAFD-LFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
+ FD LF EM R G SPD TY LL+ ++G+ K + H G
Sbjct: 268 GKMDRFDRLFDEMARDGFSPDSYTYNILLH---ILGKGNKPLAALTTLNHMK-----EVG 319
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
P+++ Y LI GL +E L M + G P+ V Y+ +I+G+ GEL KA
Sbjct: 320 IDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAK 379
Query: 316 ELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 375
E+ E K L TY+S++ G + A L +M G
Sbjct: 380 EMFREMTVKG--------------QLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGC 425
Query: 376 LSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 409
++V YS L++ L K + EA++ + + G
Sbjct: 426 NPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 142/288 (49%), Gaps = 29/288 (10%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVS-PDELTYTRLLNACCLVGEFTK 235
G+ P+ ++ L++ C ++ AF + EM R G+S P+ +TY+ L++ +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 236 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
A L ++MI K G SP VT+N +I+G C VE A +IL M + G +PN
Sbjct: 251 AVELFEDMISK-------EGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNV 303
Query: 296 VSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDT--YSSVMND 353
+YS +++GFC++G++ +A + T+D + + DT Y+++MN
Sbjct: 304 YNYSALMNGFCKVGKIQEA----------------KQTFDEVKKTGLKLDTVGYTTLMNC 347
Query: 354 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF-LS 412
+ G A++L +M + + Y+V++ GL + R+ EA + L S+G L+
Sbjct: 348 FCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLN 407
Query: 413 MPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHL 460
SY + IL C N E + V+ + S R + AT + ++ L
Sbjct: 408 KGSYRI--ILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRL 453
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 151/338 (44%), Gaps = 65/338 (19%)
Query: 93 IDSAHTLLSEMI---AK---GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPD 146
IDS LS + AK G P+ +N LV +C+ ++ A ++ M G+S
Sbjct: 171 IDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGIS-- 228
Query: 147 VDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFR 206
+P++ TYS+LM+ L R EA +LF
Sbjct: 229 --------------------------------YPNSITYSTLMDCLFAHSRSKEAVELFE 256
Query: 207 EML-RGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNA 265
+M+ + G+SPD +T+ ++N C GE +A + D M G +P + Y+A
Sbjct: 257 DMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKK--------NGCNPNVYNYSA 308
Query: 266 LIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKA 325
L++G C + +++EA + + + GL + V Y+T+++ FC+ GE +A +K+ E KA
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEA--MKLLGEMKA 366
Query: 326 IWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 385
D+L TY+ ++ +EG + ALQ+ +G + +Y ++
Sbjct: 367 ----SRCRADTL--------TYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRII 414
Query: 386 INGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 423
+N L +A + L ++ G P + ++ L+
Sbjct: 415 LNALCCNGELEKAVKFLSVMSERGI--WPHHATWNELV 450
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 9/262 (3%)
Query: 57 RIPEAEQMLEVMKCK-GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
R EA ++ E M K G+ D T++ +I FC +++ A +L M G +P+V Y
Sbjct: 247 RSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNY 306
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
++L+ +C+ + +A + + GL D Y +++ FC
Sbjct: 307 SALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKA 366
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
D TY+ ++ L E R EA + + GV ++ +Y +LNA C GE K
Sbjct: 367 SRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEK 426
Query: 236 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
A M +G P T+N L+ LC E + +L G +GL P
Sbjct: 427 AVKFLSVMSERGIWPHH--------ATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGP 478
Query: 296 VSYSTVISGFCQIGELGKAYEL 317
S+ V+ C+ +L +EL
Sbjct: 479 KSWGAVVESICKERKLVHVFEL 500
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 46/231 (19%)
Query: 21 YNGMIRGFATAAG-----------KSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMK 69
+N MI GF A K + + V + C+ G+I EA+Q + +K
Sbjct: 271 FNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVK 330
Query: 70 CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF--------- 120
GL LD Y++++ FC + D A LL EM A +TYN ++
Sbjct: 331 KTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSE 390
Query: 121 --------------------------AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI 154
A C ++KAV L M+ERG+ P ++N ++
Sbjct: 391 EALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Query: 155 SKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLF 205
+ C + G+ P ++ +++E++C E++L F+L
Sbjct: 451 VRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELL 501
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 147/372 (39%), Gaps = 51/372 (13%)
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 234
KG + ATYS L++ L ++ + +M E + L+ F+
Sbjct: 82 QKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMR------HFS 135
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALE---ILRGMPEMGL 291
++ LHD+++ L + P++ + ++ L +D E L +L +GL
Sbjct: 136 RS-DLHDKVMEMFNLIQVIARVKPSLNAISTCLNLL--IDSGEVNLSRKLLLYAKHNLGL 192
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS--------- 342
PN ++ ++ C+ G++ A+ + E + I + + TY +LMD L
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 343 --YED------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 388
+ED T++ ++N + G ++RA ++ M ++G + YS L+NG
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 389 LHKKARTREAKRDLLYIASDGF-LSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLS 447
K + +EAK+ + G L YT ++ C N E ++L+ +
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTT--LMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 448 DDAATAHTTMLHLKNKTDGEN-------------KTDGGMYNLLIFEHCRSHNVHKAYNM 494
D T + + L ++ E + G Y +++ C + + KA
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 495 YMEMVHYGHAPH 506
M G PH
Sbjct: 431 LSVMSERGIWPH 442
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 175/404 (43%), Gaps = 34/404 (8%)
Query: 61 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 120
A+ + ++ +G L+ Y+S++ N +D + +L+EM+ +G SP+ T N+ +
Sbjct: 341 ADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALC 400
Query: 121 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 180
+C+ VD+A+ + R+ +E G +P SYN +I C +D+G F
Sbjct: 401 FFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFL 460
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
T+S+L ALC + + A +L + P + ++++A C VG+ A +
Sbjct: 461 GGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMI- 519
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
+E+ +K +G + + +LI+G L R + A +++ M E G +P Y
Sbjct: 520 NELFNK-------SGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRN 572
Query: 301 VISGFCQIGELGKAYELKIETEDKAIWWLDEDTYD-------------------SLMDSL 341
VI C++ K + + ++W Y+ +MD
Sbjct: 573 VIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRD 632
Query: 342 SYEDTYSS---VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
T +S ++ YL + AL HD+ G + Y V+I GL K + +A
Sbjct: 633 GITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDA 691
Query: 399 KRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDY 441
L + +G PS Y++ ++ C+ ++ V LV ++
Sbjct: 692 MHFLEEMKGEGL--QPSIECYEVNIQKLCNEEKYDEAVGLVNEF 733
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 129/626 (20%), Positives = 225/626 (35%), Gaps = 129/626 (20%)
Query: 5 RASFTAALKMALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLK---RLCRE------ 55
RA+F A K+ + MI D + VG F+S + RLC
Sbjct: 146 RATFHAIFKILRGAKLVTLMI----------DFLDRSVG--FESCRHSLRLCDALVVGYA 193
Query: 56 --GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
GR A Q M+ +GL LD Y ++ DS + ++ +GF V
Sbjct: 194 VAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFV-CAV 252
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX---- 169
T++ LV +C++ +D+A LRA+ + ++ C
Sbjct: 253 THSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEI 312
Query: 170 ---------------XXXXVDKGIFPDAATYSSLMEAL--C---VEQRLSEAFDLFRE-- 207
+ G + A + + L C V + S F L +E
Sbjct: 313 KLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENN 372
Query: 208 ----------MLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS 257
M+ GVSP++ T L C G +A L+ GF+
Sbjct: 373 LDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSE--------IGFA 424
Query: 258 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
P ++YN LIH LC + VE+A ++L+G + G ++ST+ + C G+ A EL
Sbjct: 425 PTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMAREL 484
Query: 318 KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLS 377
I ++ D L +++ G ++ AL ++ ++ G +
Sbjct: 485 VIAAAER--------------DLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDT 530
Query: 378 SYVAYSVLINGLHKKARTREAKRDLLYIASDGF--------------------------- 410
S+ ++ LI G R A + ++ + G+
Sbjct: 531 SFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTT 590
Query: 411 -----LSMPSYTV--YDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTML--HLK 461
LS+ + V Y++ +E + L LV D RD ++ ML +LK
Sbjct: 591 LLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLK 650
Query: 462 NKTDG-----------ENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 510
N+ + KT +Y ++I C+++ + A + EM G P +
Sbjct: 651 NEKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECY 710
Query: 511 LALISALDDDRMYNEMSWVINNTLRS 536
I L ++ Y+E ++N +S
Sbjct: 711 EVNIQKLCNEEKYDEAVGLVNEFRKS 736
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 111/270 (41%), Gaps = 15/270 (5%)
Query: 24 MIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSV 83
M R AA + D K++ + + LC G++ +A + E+ G+ + ++S+
Sbjct: 480 MARELVIAAAERDLLPKRIA-GCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSL 538
Query: 84 IGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGL 143
I L + D A L+ M KG++P+ Y +++ C +S +K + + L
Sbjct: 539 IYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEK--NFFTTLLKFQL 596
Query: 144 S---PDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSE 200
S V +YN I GI P A+ ++++ +++++
Sbjct: 597 SLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIAD 656
Query: 201 AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAI 260
A F ++ G + L Y ++ C + A H +EM KG G P+I
Sbjct: 657 ALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDAMHFLEEM--KG------EGLQPSI 707
Query: 261 VTYNALIHGLCFLDRVEEALEILRGMPEMG 290
Y I LC ++ +EA+ ++ + G
Sbjct: 708 ECYEVNIQKLCNEEKYDEAVGLVNEFRKSG 737
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 163/398 (40%), Gaps = 64/398 (16%)
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
G D TY++++G + + + LL EM+ G P+ VTYN L+ +Y R + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 132 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 191
+ + M E G PD RV TY +L++
Sbjct: 419 MNVFNQMQEAGCKPD-----RV------------------------------TYCTLIDI 443
Query: 192 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 251
L A D+++ M GG+SPD TY+ ++N G A L EM+ +G P+
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 252 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGEL 311
+VTYN ++ + AL++ R M G P+ V+YS V+ G L
Sbjct: 504 --------LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 312 GKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMS 371
+A + E + K W DE Y L+D + GN+++A Q M
Sbjct: 556 EEAEAVFTEMQQKN-WIPDEPVYGLLVDL-------------WGKAGNVEKAWQWYQAML 601
Query: 372 RDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEF 431
G + + L++ + + EA L + + G PS Y +LL C++
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL--RPSLQTYTLLLSCCTDGRS 659
Query: 432 KSLVELVKDYSMRDLSDDAATAHTTMLHLKNK-TDGEN 468
K L + + ++ AH +L + DGEN
Sbjct: 660 K----LDMGFCGQLMASTGHPAHMFLLKMPAAGPDGEN 693
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 113/264 (42%), Gaps = 19/264 (7%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R + EA + M+ G D TY ++I +D A + M A G SP
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
TY+ ++ + + A + M ++G +P++ +YN ++
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
+ G PD TYS +ME L L EA +F EM + PDE Y L++ G
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
KA+ + M+H G P+ + T N+L+ ++++ EA E+L+ M +GL P
Sbjct: 591 EKAWQWYQAMLHAGLRPN--------VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 294 NAVSYSTVIS-----------GFC 306
+ +Y+ ++S GFC
Sbjct: 643 SLQTYTLLLSCCTDGRSKLDMGFC 666
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 126/307 (41%), Gaps = 47/307 (15%)
Query: 212 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 271
G D TYT ++ +F L DEM+ G P+ VTYN LIH
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPN--------TVTYNRLIHSYG 410
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDE 331
+ + EA+ + M E G P+ V+Y T+I + G L A ++ + L
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG---LSP 467
Query: 332 DTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 391
DT+ TYS ++N G++ A +L +M G + V Y+++++ LH
Sbjct: 468 DTF-----------TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHA 515
Query: 392 KARTREAKRDLLY-IASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDA 450
KAR + L + + GF P Y I++E + + E V
Sbjct: 516 KARNYQNALKLYRDMQNAGF--EPDKVTYSIVMEVLGHCGYLEEAEAV------------ 561
Query: 451 ATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 510
T + KN D +Y LL+ ++ NV KA+ Y M+H G P++ +
Sbjct: 562 ----FTEMQQKNWI-----PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTC 612
Query: 511 LALISAL 517
+L+S
Sbjct: 613 NSLLSTF 619
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 163/398 (40%), Gaps = 64/398 (16%)
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
G D TY++++G + + + LL EM+ G P+ VTYN L+ +Y R + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 132 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 191
+ + M E G PD RV TY +L++
Sbjct: 419 MNVFNQMQEAGCKPD-----RV------------------------------TYCTLIDI 443
Query: 192 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 251
L A D+++ M GG+SPD TY+ ++N G A L EM+ +G P+
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 252 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGEL 311
+VTYN ++ + AL++ R M G P+ V+YS V+ G L
Sbjct: 504 --------LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 312 GKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMS 371
+A + E + K W DE Y L+D + GN+++A Q M
Sbjct: 556 EEAEAVFTEMQQKN-WIPDEPVYGLLVDL-------------WGKAGNVEKAWQWYQAML 601
Query: 372 RDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEF 431
G + + L++ + + EA L + + G PS Y +LL C++
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL--RPSLQTYTLLLSCCTDGRS 659
Query: 432 KSLVELVKDYSMRDLSDDAATAHTTMLHLKNK-TDGEN 468
K L + + ++ AH +L + DGEN
Sbjct: 660 K----LDMGFCGQLMASTGHPAHMFLLKMPAAGPDGEN 693
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 113/264 (42%), Gaps = 19/264 (7%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R + EA + M+ G D TY ++I +D A + M A G SP
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
TY+ ++ + + A + M ++G +P++ +YN ++
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
+ G PD TYS +ME L L EA +F EM + PDE Y L++ G
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
KA+ + M+H G P+ + T N+L+ ++++ EA E+L+ M +GL P
Sbjct: 591 EKAWQWYQAMLHAGLRPN--------VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 294 NAVSYSTVIS-----------GFC 306
+ +Y+ ++S GFC
Sbjct: 643 SLQTYTLLLSCCTDGRSKLDMGFC 666
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 126/307 (41%), Gaps = 47/307 (15%)
Query: 212 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 271
G D TYT ++ +F L DEM+ G P+ VTYN LIH
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPN--------TVTYNRLIHSYG 410
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDE 331
+ + EA+ + M E G P+ V+Y T+I + G L A ++ + L
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG---LSP 467
Query: 332 DTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 391
DT+ TYS ++N G++ A +L +M G + V Y+++++ LH
Sbjct: 468 DTF-----------TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHA 515
Query: 392 KARTREAKRDLLY-IASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDA 450
KAR + L + + GF P Y I++E + + E V
Sbjct: 516 KARNYQNALKLYRDMQNAGF--EPDKVTYSIVMEVLGHCGYLEEAEAV------------ 561
Query: 451 ATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 510
T + KN D +Y LL+ ++ NV KA+ Y M+H G P++ +
Sbjct: 562 ----FTEMQQKNWI-----PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTC 612
Query: 511 LALISAL 517
+L+S
Sbjct: 613 NSLLSTF 619
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 163/398 (40%), Gaps = 64/398 (16%)
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
G D TY++++G + + + LL EM+ G P+ VTYN L+ +Y R + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 132 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 191
+ + M E G PD RV TY +L++
Sbjct: 419 MNVFNQMQEAGCKPD-----RV------------------------------TYCTLIDI 443
Query: 192 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 251
L A D+++ M GG+SPD TY+ ++N G A L EM+ +G P+
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 252 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGEL 311
+VTYN ++ + AL++ R M G P+ V+YS V+ G L
Sbjct: 504 --------LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 312 GKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMS 371
+A + E + K W DE Y L+D + GN+++A Q M
Sbjct: 556 EEAEAVFTEMQQKN-WIPDEPVYGLLVDL-------------WGKAGNVEKAWQWYQAML 601
Query: 372 RDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEF 431
G + + L++ + + EA L + + G PS Y +LL C++
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL--RPSLQTYTLLLSCCTDGRS 659
Query: 432 KSLVELVKDYSMRDLSDDAATAHTTMLHLKNK-TDGEN 468
K L + + ++ AH +L + DGEN
Sbjct: 660 K----LDMGFCGQLMASTGHPAHMFLLKMPAAGPDGEN 693
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 113/264 (42%), Gaps = 19/264 (7%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R + EA + M+ G D TY ++I +D A + M A G SP
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
TY+ ++ + + A + M ++G +P++ +YN ++
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
+ G PD TYS +ME L L EA +F EM + PDE Y L++ G
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
KA+ + M+H G P+ + T N+L+ ++++ EA E+L+ M +GL P
Sbjct: 591 EKAWQWYQAMLHAGLRPN--------VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 294 NAVSYSTVIS-----------GFC 306
+ +Y+ ++S GFC
Sbjct: 643 SLQTYTLLLSCCTDGRSKLDMGFC 666
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 126/307 (41%), Gaps = 47/307 (15%)
Query: 212 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 271
G D TYT ++ +F L DEM+ G P+ VTYN LIH
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPN--------TVTYNRLIHSYG 410
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDE 331
+ + EA+ + M E G P+ V+Y T+I + G L A ++ + L
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG---LSP 467
Query: 332 DTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 391
DT+ TYS ++N G++ A +L +M G + V Y+++++ LH
Sbjct: 468 DTF-----------TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHA 515
Query: 392 KARTREAKRDLLY-IASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDA 450
KAR + L + + GF P Y I++E + + E V
Sbjct: 516 KARNYQNALKLYRDMQNAGF--EPDKVTYSIVMEVLGHCGYLEEAEAV------------ 561
Query: 451 ATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 510
T + KN D +Y LL+ ++ NV KA+ Y M+H G P++ +
Sbjct: 562 ----FTEMQQKNWI-----PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTC 612
Query: 511 LALISAL 517
+L+S
Sbjct: 613 NSLLSTF 619
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 154/339 (45%), Gaps = 40/339 (11%)
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V YN+++ Y R KA ++ AM +RG PD+ S+N +I+
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 172 XXV--DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 229
+ + G+ PDA TY++L+ A + L A +F +M PD TY +++
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 230 VGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 289
G +A L E+ KGF PD VTYN+L++ E+ E+ + M +M
Sbjct: 345 CGLAAEAERLFMELELKGFFPD--------AVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
Query: 290 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED---- 345
G + ++Y+T+I + + G+L A +L + + + D TY L+DSL +
Sbjct: 397 GFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVE 456
Query: 346 ------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 387
TYS+++ Y G + A M R G +AYSV+++
Sbjct: 457 AAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLD 516
Query: 388 GLHKKARTREA---KRDLLYIASDGFLSMPSYTVYDILL 423
L + TR+A RD++ SDG PSYT+Y++++
Sbjct: 517 VLLRGNETRKAWGLYRDMI---SDGH--TPSYTLYELMI 550
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 122/508 (24%), Positives = 213/508 (41%), Gaps = 95/508 (18%)
Query: 18 VNIYNGMIRGFATAAGKSDSESKKVGE-----------AFQSL--KRLCREGRIPE-AEQ 63
V +YN M+ G + +GK + V +F +L RL G P A +
Sbjct: 225 VQVYNAMM-GVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVE 283
Query: 64 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 123
+L++++ GL D TY++++ + +D A + +M A P + TYN+++ Y
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 124 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 183
R +A + + +G PD A
Sbjct: 344 RCGLAAEAERLFMELELKGFFPD-----------------------------------AV 368
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
TY+SL+ A E+ + +++++M + G DE+TY +++ G+ A L+ +M
Sbjct: 369 TYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM 428
Query: 244 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVIS 303
KG ++G +P +TY LI L +R EA ++ M ++G+ P +YS +I
Sbjct: 429 --KG-----LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALIC 481
Query: 304 GFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS-SVMNDYLAEGNMQR 362
G+ + G+ +A EDT+ ++ S + D + SVM D L GN R
Sbjct: 482 GYAKAGKREEA----------------EDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETR 525
Query: 363 -ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK---RDLLYIASDGFLSMPSYTV 418
A L DM DG+ SY Y ++I GL K+ R+ + + RD+ + L + S V
Sbjct: 526 KAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLV 585
Query: 419 -----------YDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGE 467
+ + N E +L+ ++ YS S + A + LK G
Sbjct: 586 KGECFDLAARQLKVAITNGYELENDTLLSILGSYSS---SGRHSEAFELLEFLKEHASGS 642
Query: 468 NKTDGGMYNLLIFEHCRSHNVHKAYNMY 495
+ + LI HC+ +N+ A + Y
Sbjct: 643 KRL---ITEALIVLHCKVNNLSAALDEY 667
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 115/285 (40%), Gaps = 14/285 (4%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L R G I E +++ MK G R Y +I C ++ A ++SEM F
Sbjct: 864 LDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF 923
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
+ +NS++ Y + K V + + + E GL PD +YN +I +C
Sbjct: 924 KVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYL 983
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ G+ P TY SL+ A ++ L +A LF E+L G+ D Y ++
Sbjct: 984 LMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISR 1043
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G +KA L M + G P + T + L+ +EA ++L + +
Sbjct: 1044 DSGSDSKAEKLLQMMKN--------AGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKD 1095
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETE------DKAIW 327
+ + YS+VI + + + E +E + D IW
Sbjct: 1096 TEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIW 1140
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 161/427 (37%), Gaps = 61/427 (14%)
Query: 53 CREGRIPEAEQMLEVMKCKGL-FLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C+ G A Q++ + KG F Y+ +I + A +++ + G +P
Sbjct: 727 CKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPD 786
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+ T+NSL+ AY + ++A I M G SP V+S N ++ C
Sbjct: 787 LKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVE 846
Query: 172 XXVDKG--------------------IFPDAATYSS---------------LMEALCVEQ 196
D G IF YSS ++E LC +
Sbjct: 847 ELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGK 906
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 256
R+ +A + EM + + +L + ++ K ++ + TG
Sbjct: 907 RVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKE--------TGL 958
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
P TYN LI C R EE +++ M +GL P +Y ++IS F + L +A +
Sbjct: 959 EPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQ 1018
Query: 317 LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 376
L E K + LD Y ++M + D ++ ++ LQ+ M G
Sbjct: 1019 LFEELLSKGL-KLDRSFYHTMM----------KISRDSGSDSKAEKLLQM---MKNAGIE 1064
Query: 377 SSYVAYSVLINGLHKKARTREAKRDL--LYIASDGFLSMPSYTVYDILLENCS-NSEFKS 433
+ +L+ +EA++ L L ++P +V D L + NS +
Sbjct: 1065 PTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIER 1124
Query: 434 LVELVKD 440
L+E+ K+
Sbjct: 1125 LLEMKKE 1131
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 127/343 (37%), Gaps = 80/343 (23%)
Query: 179 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 238
F + Y+ ++EA ++ +A + + + G +PD T+ L++A G + +A
Sbjct: 749 FACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARA 808
Query: 239 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSY 298
+ + M+ G P SP + + N L+H LC R+EE ++ + +MG + S
Sbjct: 809 IFNTMMRDG--P------SPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSI 860
Query: 299 STVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEG 358
++ F + G + +E+K YSS
Sbjct: 861 LLMLDAFARAGNI---FEVK--------------------------KIYSS--------- 882
Query: 359 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTV 418
M GYL + Y ++I L K R R+A
Sbjct: 883 -----------MKAAGYLPTIRLYRMMIELLCKGKRVRDA-------------------- 911
Query: 419 YDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLL 478
+I++ + FK VEL SM + T+ + + + D YN L
Sbjct: 912 -EIMVSEMEEANFK--VELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTL 968
Query: 479 IFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDR 521
I +CR + Y + +M + G P + + +LISA +
Sbjct: 969 IIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQK 1011
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 8/216 (3%)
Query: 102 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXX 161
+M+ GF+P V+TYN ++FA R D+ +L M + G SPD+ +YN ++
Sbjct: 247 QMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGN 306
Query: 162 XXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYT 221
+ G+ P +++L++ L +L E ++ G +PD + YT
Sbjct: 307 KPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYT 366
Query: 222 RLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALE 281
++ GE KA + EM KG LP+ + TYN++I G C + +EA
Sbjct: 367 VMITGYISGGELEKAEEMFKEMTEKGQLPN--------VFTYNSMIRGFCMAGKFKEACA 418
Query: 282 ILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
+L+ M G +PN V YST+++ G++ +A+E+
Sbjct: 419 LLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEV 454
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 102/229 (44%), Gaps = 12/229 (5%)
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
EQMLE G D TY+ V+ L K D + LL EM+ GFSP + TYN L+
Sbjct: 246 EQMLE----DGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHH 301
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 181
+ A+ +L M E G+ P V + +I V G PD
Sbjct: 302 LATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPD 361
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 241
Y+ ++ L +A ++F+EM G P+ TY ++ C+ G+F +A L
Sbjct: 362 VVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLK 421
Query: 242 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
EM +G P+F V Y+ L++ L +V EA E+++ M E G
Sbjct: 422 EMESRGCNPNF--------VVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 150/343 (43%), Gaps = 60/343 (17%)
Query: 99 LLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 158
L+ EMI G+ + T+N L+ C G+ R + E+ + +Y
Sbjct: 174 LIDEMIKDGYPTTACTFN-LLICTC------GEAGLARDVVEQFIKSKTFNYR------- 219
Query: 159 XXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 218
P +Y++++ +L ++ ++ +ML G +PD L
Sbjct: 220 ---------------------PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVL 258
Query: 219 TYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEE 278
TY ++ A +G+ + + L DEM+ GF PD + TYN L+H L ++
Sbjct: 259 TYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPD--------LYTYNILLHHLATGNKPLA 310
Query: 279 ALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLM 338
AL +L M E+G+ P + ++T+I G + G+L + +++DE
Sbjct: 311 ALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL-----------EACKYFMDETVKVGCT 359
Query: 339 DSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
+ Y+ ++ Y++ G +++A ++ +M+ G L + Y+ +I G + +EA
Sbjct: 360 PDVV---CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEA 416
Query: 399 KRDLLYIASDGFLSMPSYTVYDILLENCSNS-EFKSLVELVKD 440
L + S G P++ VY L+ N N+ + E+VKD
Sbjct: 417 CALLKEMESRG--CNPNFVVYSTLVNNLKNAGKVLEAHEVVKD 457
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R G+ ++L+ M G D TY+ ++ NK +A LL+ M G P V+
Sbjct: 269 RLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVI 328
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
+ +L+ R ++ + + G +PDV Y +I+ +
Sbjct: 329 HFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEM 388
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
+KG P+ TY+S++ C+ + EA L +EM G +P+ + Y+ L+N G+
Sbjct: 389 TEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKV 448
Query: 234 TKAFHLHDEMIHKG 247
+A + +M+ KG
Sbjct: 449 LEAHEVVKDMVEKG 462
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 52/104 (50%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L R G++ + ++ G D Y+ +I + + +++ A + EM KG P+
Sbjct: 337 LSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPN 396
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVIS 155
V TYNS++ +C +A +L+ M RG +P+ Y+ +++
Sbjct: 397 VFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVN 440
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 161/367 (43%), Gaps = 22/367 (5%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L LC+ G + +A ++ E M+ + ++ R ++S++ +C + K+ A +L +M GF
Sbjct: 225 LDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGF 283
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P +V Y +L+ Y + A +LR M RG P+ + Y +I C
Sbjct: 284 EPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMK 343
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
D TY++L+ C ++ + + + +M++ G+ P ELTY ++ A
Sbjct: 344 VFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHE 403
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
F + L ++M + PD I YN +I C L V+EA+ + M E
Sbjct: 404 KKESFEECLELMEKMRQIEYHPD--------IGIYNVVIRLACKLGEVKEAVRLWNEMEE 455
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
GLSP ++ +I+G G L +A + E + ++ S+S T
Sbjct: 456 NGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF------------SVSQYGTLK 503
Query: 349 SVMNDYLAEGNMQRALQLDHDMSRDGYLS-SYVAYSVLINGLHKKARTREAKRDLLYIAS 407
++N L + ++ A + ++ G + +++++ I+ L K +EA + +
Sbjct: 504 LLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIE 563
Query: 408 DGFLSMP 414
F+ P
Sbjct: 564 MDFMPQP 570
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 116/262 (44%), Gaps = 9/262 (3%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
++ LC+ R+ EA ++ M+ D TY++++ FC KID + +L +MI KG
Sbjct: 329 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 388
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
PS +TY ++ A+ +++S ++ + ++ M + PD+ YN VI C
Sbjct: 389 MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVR 448
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREML-RGGVSPDEL-TYTRLLNA 226
+ G+ P T+ ++ L + L EA D F+EM+ RG S + T LLN
Sbjct: 449 LWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNT 508
Query: 227 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 286
+ A + + KG ++++ IH L +EA M
Sbjct: 509 VLKDKKLEMAKDVWSCITSKG-------ACELNVLSWTIWIHALFSKGYEKEACSYCIEM 561
Query: 287 PEMGLSPNAVSYSTVISGFCQI 308
EM P +++ ++ G ++
Sbjct: 562 IEMDFMPQPDTFAKLMKGLKKL 583
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 162/369 (43%), Gaps = 25/369 (6%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
GR A ++ + MK + E+ Y++++G + + K++ A L EM G SP+V TY
Sbjct: 247 GRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTY 306
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
L+ + VD+A G + M GL+PDV N +++
Sbjct: 307 TELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGM 366
Query: 176 KGIFPDAATYSSLMEALCVEQ-RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 234
P +Y+++++AL + +SE F +M VSP E TY+ L++ C
Sbjct: 367 WRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVE 426
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
KA L +EM KGF P PA Y +LI+ L R E A E+ + + E + +
Sbjct: 427 KALLLLEEMDEKGFPP------CPA--AYCSLINALGKAKRYEAANELFKELKENFGNVS 478
Query: 295 AVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDY 354
+ Y+ +I F + G+L +A +L E +++ D Y Y+++M+
Sbjct: 479 SRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGS---GPDVY-----------AYNALMSGM 524
Query: 355 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMP 414
+ G + A L M +G + ++++++NG + R A I G P
Sbjct: 525 VKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI--KP 582
Query: 415 SYTVYDILL 423
Y+ LL
Sbjct: 583 DGVTYNTLL 591
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 171/408 (41%), Gaps = 37/408 (9%)
Query: 18 VNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCR---------------EGRIPEAE 62
V++ ++ A G++ SK + +Q+ R C+ EG+ +
Sbjct: 158 VSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVH 217
Query: 63 QMLEVMKCKG-LFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
++ M +G F D TYS++I + L + DSA L EM P+ Y +L+
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 181
Y + V+KA+ + M G SP V +Y +I + G+ PD
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD 337
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 241
++LM L R+ E ++F EM +P ++Y ++ A F H+ +
Sbjct: 338 VVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKAL-----FESKAHVSE 392
Query: 242 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTV 301
+ F SP+ TY+ LI G C +RVE+AL +L M E G P +Y ++
Sbjct: 393 --VSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL 450
Query: 302 ISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQ 361
I+ LGKA + E ++ L E+ ++S Y+ ++ + G +
Sbjct: 451 INA------LGKAK--RYEAANELFKELKEN-----FGNVS-SRVYAVMIKHFGKCGKLS 496
Query: 362 RALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 409
A+ L ++M G AY+ L++G+ K EA L + +G
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 8/248 (3%)
Query: 55 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 114
+ + E + MK + E TYS +I +C N+++ A LL EM KGF P
Sbjct: 387 KAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA 446
Query: 115 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 174
Y SL+ A + + A + + + E + Y +I F
Sbjct: 447 YCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMK 506
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 234
++G PD Y++LM + ++EA L R+M G D ++ +LN G
Sbjct: 507 NQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPR 566
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
+A + + + H G PD VTYN L+ EEA ++R M + G +
Sbjct: 567 RAIEMFETIKHSGIKPDG--------VTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYD 618
Query: 295 AVSYSTVI 302
A++YS+++
Sbjct: 619 AITYSSIL 626
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L + R A ++ + +K + R Y+ +I F K+ A L +EM +G P
Sbjct: 454 LGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPD 513
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V YN+L+ + +++A +LR M E G D++S+N +++ F
Sbjct: 514 VYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFE 573
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
GI PD TY++L+ EA + REM G D +TY+ +L+A
Sbjct: 574 TIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 189/421 (44%), Gaps = 24/421 (5%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L GR EA+ + + + G +Y++++ + S +++SE+ G
Sbjct: 55 LIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLD 114
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+ +N+++ A+ +++ AV L M E GL+P +YN +I +
Sbjct: 115 SIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 172 XXVDKG---IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+++G + P+ T++ L++A C ++++ EA+++ ++M GV PD +TY +
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYV 234
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
GE +A E++ K + + P T ++ G C RV + L +R M E
Sbjct: 235 QKGETVRA---ESEVVEKMVMKEKA---KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIE----TEDKAIWWLDEDTYD----SLMDS 340
M + N V ++++I+GF ++ + E+ + + ++ + + +LM
Sbjct: 289 MRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKE 348
Query: 341 LSYED---TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTRE 397
+ + TYS+VMN + + G M++A Q+ +M + G AYS+L G R +E
Sbjct: 349 CNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY---VRAKE 405
Query: 398 AKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTT 456
K+ + + S P+ ++ ++ CSN + + +S + T T
Sbjct: 406 PKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETL 465
Query: 457 M 457
M
Sbjct: 466 M 466
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 165/404 (40%), Gaps = 52/404 (12%)
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
+V + L+ R +A + + +AE G P + SY +++
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
G D+ +++++ A + +A +M G++P TY L+ +
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
G+ ++ L D M+ +G + P I T+N L+ C +VEEA E+++ M E G
Sbjct: 164 GKPERSSELLDLMLEEGNV-----DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECG 218
Query: 291 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 350
+ P+ V+Y+T+ + + Q GE +A + E +K + + E + T V
Sbjct: 219 VRPDTVTYNTIATCYVQKGETVRA---ESEVVEKMV--MKEKAKPN-------GRTCGIV 266
Query: 351 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 410
+ Y EG ++ L+ M ++ V ++ LING + + DG
Sbjct: 267 VGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF------------VEVMDRDG- 313
Query: 411 LSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT 470
+ T+ +L+ F VELV + M+ +L L + + K
Sbjct: 314 --IDEVTLTLLLM------SFNEEVELVGNQKMK----------VQVLTLMKECN--VKA 353
Query: 471 DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP--HMFSVLA 512
D Y+ ++ + + KA ++ EMV G P H +S+LA
Sbjct: 354 DVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILA 397
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 142/339 (41%), Gaps = 52/339 (15%)
Query: 21 YNGMIRGFATAAGKSDSESK-----------KVGEAFQSLKRL----CREGRIPEAEQML 65
YN +I+G+ A GK + S+ VG ++ L C++ ++ EA +++
Sbjct: 153 YNTLIKGYGIA-GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVV 211
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHT-LLSEMIAK-GFSPSVVTYNSLVFAYC 123
+ M+ G+ D TY+++ + + A + ++ +M+ K P+ T +V YC
Sbjct: 212 KKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYC 271
Query: 124 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXX---------------------- 161
R V + +R M E + ++ +N +I+ F
Sbjct: 272 REGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVE 331
Query: 162 ---XXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 218
+ + D TYS++M A + +A +F+EM++ GV PD
Sbjct: 332 LVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 391
Query: 219 TYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEE 278
Y+ L E KA L + +I + P +V + +I G C +++
Sbjct: 392 AYSILAKGYVRAKEPKKAEELLETLIVES---------RPNVVIFTTVISGWCSNGSMDD 442
Query: 279 ALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
A+ + M + G+SPN ++ T++ G+ ++ + KA E+
Sbjct: 443 AMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 481
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 63 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 122
Q+L +MK + D TYS+V+ + + ++ A + EM+ G P Y+ L Y
Sbjct: 341 QVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 400
Query: 123 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 182
R KA +L + P+V + VIS +C G+ P+
Sbjct: 401 VRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI 459
Query: 183 ATYSSLMEALCVEQRLSEAFDLFREMLRG-GVSPDELTYTRLLNACCLVG 231
T+ +LM ++ +A ++ +M+RG GV P+ T+ L A + G
Sbjct: 460 KTFETLMWGYLEVKQPWKAEEVL-QMMRGCGVKPENSTFLLLAEAWRVAG 508
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 9/290 (3%)
Query: 55 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 114
+GR+ A + M+ + + T + V+ +C K+D LL +M GF + V+
Sbjct: 216 QGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVS 275
Query: 115 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 174
YN+L+ +C + + A+ + M + GL P+V ++N +I FC
Sbjct: 276 YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 234
+ P+ TY++L+ + AF + +M+ G+ D LTY L+ C +
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
KA E+ + +P+ T++ALI G C + E+ + M G PN
Sbjct: 396 KAAQFVKELDKENLVPN--------SSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN 447
Query: 295 AVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYE 344
+++ ++S FC+ + A ++ E ++I LD T + + L ++
Sbjct: 448 EQTFNMLVSAFCRNEDFDGASQVLREMVRRSI-PLDSRTVHQVCNGLKHQ 496
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 151/373 (40%), Gaps = 63/373 (16%)
Query: 78 RTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV------------------------- 112
R + S+ F +L K +A +M GF P+V
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 113 ----------VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 162
T N ++ YCR +DK + +L+ M G SYN +I+ C
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 163 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 222
G+ P+ T+++L+ C +L EA +F EM V+P+ +TY
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 223 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 282
L+N G+ AF +++M+ G D I+TYNALI GLC + +A +
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRD--------ILTYNALIFGLCKQAKTRKAAQF 400
Query: 283 LRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS 342
++ + + L PN+ ++S +I G C + +EL Y S++ S
Sbjct: 401 VKELDKENLVPNSSTFSALIMGQCVRKNADRGFEL----------------YKSMIRSGC 444
Query: 343 Y--EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY-LSSYVAYSVLINGLHKKARTREAK 399
+ E T++ +++ + + A Q+ +M R L S + V NGL + + + K
Sbjct: 445 HPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV-CNGLKHQGKDQLVK 503
Query: 400 RDLLYIASDGFLS 412
+ L + FL
Sbjct: 504 KLLQEMEGKKFLQ 516
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 181/459 (39%), Gaps = 101/459 (22%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS--PSVVTYNSLVFAYCRRDSVDKAVGILR 136
T++ V+ K SA ++L +++ G P+ V +++L+++Y DS
Sbjct: 117 THAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKV-FDALLYSYRECDS--------- 166
Query: 137 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 196
+P V ++ + F D G P + ++ M +L +
Sbjct: 167 -------TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQG 217
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 256
R+ A +REM R +SP+ T +++ C G+ K L +M GF
Sbjct: 218 RVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER--------LGF 269
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
V+YN LI G C + AL++ M + GL PN V+++T+I GFC+ +L +A
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEAS- 328
Query: 317 LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 376
K+ E KA+ TY++++N Y +G+ + A + DM +G
Sbjct: 329 -KVFGEMKAVNVAPNTV------------TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQ 375
Query: 377 SSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVE 436
+ Y+ LI GL K+A+TR+A +
Sbjct: 376 RDILTYNALIFGLCKQAKTRKA------------------------------------AQ 399
Query: 437 LVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYM 496
VK+ +L +++T ++ LI C N + + +Y
Sbjct: 400 FVKELDKENLVPNSST----------------------FSALIMGQCVRKNADRGFELYK 437
Query: 497 EMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLR 535
M+ G P+ + L+SA + ++ S V+ +R
Sbjct: 438 SMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVR 476
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 124/272 (45%), Gaps = 8/272 (2%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
CR G++ + ++L+ M+ G + +Y+++I C + SA L + M G P+V
Sbjct: 249 CRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNV 308
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
VT+N+L+ +CR + +A + M ++P+ +YN +I+ +
Sbjct: 309 VTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYED 368
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
V GI D TY++L+ LC + + +A +E+ + + P+ T++ L+ C+
Sbjct: 369 MVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKN 428
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
+ F L+ MI +G P T+N L+ C + + A ++LR M +
Sbjct: 429 ADRGFELYKSMIR--------SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP 480
Query: 293 PNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
++ + V +G G+ +L E E K
Sbjct: 481 LDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
CR ++ EA ++ MK + + TY+++I + + A +M+ G
Sbjct: 318 FCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
++TYN+L+F C++ KA ++ + + L P+ +++ +I C
Sbjct: 378 ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 437
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ G P+ T++ L+ A C + A + REM+R + D T ++ N G
Sbjct: 438 SMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
Query: 232 EFTKAFHLHDEMIHKGFLPD 251
+ L EM K FL +
Sbjct: 498 KDQLVKKLLQEMEGKKFLQE 517
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 9/290 (3%)
Query: 55 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 114
+GR+ A + M+ + + T + V+ +C K+D LL +M GF + V+
Sbjct: 216 QGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVS 275
Query: 115 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 174
YN+L+ +C + + A+ + M + GL P+V ++N +I FC
Sbjct: 276 YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 234
+ P+ TY++L+ + AF + +M+ G+ D LTY L+ C +
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
KA E+ + +P+ T++ALI G C + E+ + M G PN
Sbjct: 396 KAAQFVKELDKENLVPN--------SSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN 447
Query: 295 AVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYE 344
+++ ++S FC+ + A ++ E ++I LD T + + L ++
Sbjct: 448 EQTFNMLVSAFCRNEDFDGASQVLREMVRRSI-PLDSRTVHQVCNGLKHQ 496
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 151/373 (40%), Gaps = 63/373 (16%)
Query: 78 RTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV------------------------- 112
R + S+ F +L K +A +M GF P+V
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 113 ----------VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 162
T N ++ YCR +DK + +L+ M G SYN +I+ C
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 163 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 222
G+ P+ T+++L+ C +L EA +F EM V+P+ +TY
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 223 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 282
L+N G+ AF +++M+ G D I+TYNALI GLC + +A +
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRD--------ILTYNALIFGLCKQAKTRKAAQF 400
Query: 283 LRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS 342
++ + + L PN+ ++S +I G C + +EL Y S++ S
Sbjct: 401 VKELDKENLVPNSSTFSALIMGQCVRKNADRGFEL----------------YKSMIRSGC 444
Query: 343 Y--EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY-LSSYVAYSVLINGLHKKARTREAK 399
+ E T++ +++ + + A Q+ +M R L S + V NGL + + + K
Sbjct: 445 HPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV-CNGLKHQGKDQLVK 503
Query: 400 RDLLYIASDGFLS 412
+ L + FL
Sbjct: 504 KLLQEMEGKKFLQ 516
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 181/459 (39%), Gaps = 101/459 (22%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS--PSVVTYNSLVFAYCRRDSVDKAVGILR 136
T++ V+ K SA ++L +++ G P+ V +++L+++Y DS
Sbjct: 117 THAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKV-FDALLYSYRECDS--------- 166
Query: 137 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 196
+P V ++ + F D G P + ++ M +L +
Sbjct: 167 -------TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQG 217
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 256
R+ A +REM R +SP+ T +++ C G+ K L +M GF
Sbjct: 218 RVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER--------LGF 269
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
V+YN LI G C + AL++ M + GL PN V+++T+I GFC+ +L +A
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEAS- 328
Query: 317 LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 376
K+ E KA+ TY++++N Y +G+ + A + DM +G
Sbjct: 329 -KVFGEMKAVNVAPNTV------------TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQ 375
Query: 377 SSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVE 436
+ Y+ LI GL K+A+TR+A +
Sbjct: 376 RDILTYNALIFGLCKQAKTRKA------------------------------------AQ 399
Query: 437 LVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYM 496
VK+ +L +++T ++ LI C N + + +Y
Sbjct: 400 FVKELDKENLVPNSST----------------------FSALIMGQCVRKNADRGFELYK 437
Query: 497 EMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLR 535
M+ G P+ + L+SA + ++ S V+ +R
Sbjct: 438 SMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVR 476
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 124/272 (45%), Gaps = 8/272 (2%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
CR G++ + ++L+ M+ G + +Y+++I C + SA L + M G P+V
Sbjct: 249 CRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNV 308
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
VT+N+L+ +CR + +A + M ++P+ +YN +I+ +
Sbjct: 309 VTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYED 368
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
V GI D TY++L+ LC + + +A +E+ + + P+ T++ L+ C+
Sbjct: 369 MVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKN 428
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
+ F L+ MI +G P T+N L+ C + + A ++LR M +
Sbjct: 429 ADRGFELYKSMIR--------SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP 480
Query: 293 PNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
++ + V +G G+ +L E E K
Sbjct: 481 LDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
CR ++ EA ++ MK + + TY+++I + + A +M+ G
Sbjct: 318 FCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
++TYN+L+F C++ KA ++ + + L P+ +++ +I C
Sbjct: 378 ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 437
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ G P+ T++ L+ A C + A + REM+R + D T ++ N G
Sbjct: 438 SMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
Query: 232 EFTKAFHLHDEMIHKGFLPD 251
+ L EM K FL +
Sbjct: 498 KDQLVKKLLQEMEGKKFLQE 517
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 182/466 (39%), Gaps = 44/466 (9%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
D T+ +I ++K++ A +L +M KG + L+ +Y + V ++V I
Sbjct: 149 DRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIF 208
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 195
+ M + G+ + SYN + V +G+ P TY+ ++ +
Sbjct: 209 QKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLS 268
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
RL A F +M G+SPD+ T+ ++N C + +A L EM KG
Sbjct: 269 LRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM--KG------NK 320
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
P++V+Y +I G +DRV++ L I M G+ PNA +YST++ G C G++ +A
Sbjct: 321 IGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAK 380
Query: 316 ELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 375
+ K I D + L+ S S G+M A ++ M+
Sbjct: 381 NILKNMMAKHIAPKDNSIFLKLLVSQS-------------KAGDMAAATEVLKAMATLNV 427
Query: 376 LSSYVAYSVLI-NGLHKKARTREAK-------RDLLYIASDGFLSMPSYTVYDILLEN-C 426
+ Y VLI N A R K ++++ D PS Y+ ++E C
Sbjct: 428 PAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS--AYNPIIEYLC 485
Query: 427 SNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN------------KTDGGM 474
+N + L + R + D A + H K + +
Sbjct: 486 NNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNA 545
Query: 475 YNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDD 520
Y LLI + A MV GH P ++I +L +D
Sbjct: 546 YELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFED 591
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 167/400 (41%), Gaps = 37/400 (9%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
+ G + E+ ++ + MK G+ ++Y+S+ + A ++M+++G P+
Sbjct: 197 KAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRH 256
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
TYN +++ + ++ A+ M RG+SPD ++N +I+ FC
Sbjct: 257 TYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM 316
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
I P +Y+++++ R+ + +F EM G+ P+ TY+ LL C G+
Sbjct: 317 KGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKM 376
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
+A ++ M+ K P + F +V+ + + A E+L+ M + +
Sbjct: 377 VEAKNILKNMMAKHIAPKDNSIFLKLLVSQSK-------AGDMAAATEVLKAMATLNVPA 429
Query: 294 NAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDT-------YDSLMDSL----- 341
A Y +I C+ +A +L +K I +DT Y+ +++ L
Sbjct: 430 EAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQ 489
Query: 342 ----------------SYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 385
+D ++++ + EGN + ++ MSR G AY +L
Sbjct: 490 TAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELL 549
Query: 386 INGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN 425
I K +AK L + DG + P +++ ++E+
Sbjct: 550 IKSYMSKGEPGDAKTALDSMVEDGHV--PDSSLFRSVIES 587
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 188/463 (40%), Gaps = 87/463 (18%)
Query: 57 RIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYN 116
R+ A + E MK +G+ D+ T++++I FC K+D A L EM PSVV+Y
Sbjct: 270 RLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYT 329
Query: 117 SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 176
+++ Y D VD + I M G+ P+ +Y+ ++ C + K
Sbjct: 330 TMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAK 389
Query: 177 GIFP-DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
I P D + + L+ + ++ A ++ + M V + Y L+ C + +
Sbjct: 390 HIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNR 449
Query: 236 AFHLHDEMI-------HKGFLPDFVTGFSPAIVTY------------------------- 263
A L D +I H+ L + ++P I+ Y
Sbjct: 450 AIKLLDTLIEKEIILRHQDTLEMEPSAYNP-IIEYLCNNGQTAKAEVLFRQLMKRGVQDQ 508
Query: 264 ---NALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE-LKI 319
N LI G + + EIL+ M G+ + +Y +I + GE G A L
Sbjct: 509 DALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDS 568
Query: 320 ETEDKAIWWLDEDTYDSLMDSLSYED----TYSSVM---------------------NDY 354
ED + D + S+++SL +ED T S VM
Sbjct: 569 MVEDGHV--PDSSLFRSVIESL-FEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEAL 625
Query: 355 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA--------KRDL-LYI 405
L G+++ AL ++++G+ + + L++ L +K +T A +RDL L
Sbjct: 626 LMRGHVEEALGRIDLLNQNGHTADLDS---LLSVLSEKGKTIAALKLLDFGLERDLSLEF 682
Query: 406 AS-----DGFL----SMPSYTVYDILLENCSNSEFKSLVELVK 439
+S D L ++ +Y+V ++E S++++KS EL+K
Sbjct: 683 SSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIK 725
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 104/233 (44%), Gaps = 9/233 (3%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
D TY+ +I D A L EM+ K P+ VT+ +L+ C+ V +A+ +
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 136 RAMAE-RGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 194
M + G+ P V Y +I C + I DAA YS+L+ +L
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 195 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 254
R +E + EM G PD +TY L+N C+ + A + DEM+ KG PD
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD--- 327
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQ 307
+++YN ++ + + EEA + MP G SP+ +SY V G C+
Sbjct: 328 -----VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCE 375
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 25/315 (7%)
Query: 21 YNGMIRGFATAAGKSDS----------ESKKVGEAFQSLKR-LCREGRIPEAEQML-EVM 68
YN +I G + + D+ + K G F +L LC++ R+ EA +M +++
Sbjct: 155 YNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDML 214
Query: 69 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 128
K G+ Y+S+I C + ++ A L E Y++L+ + +
Sbjct: 215 KVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRS 274
Query: 129 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 188
++ IL M+E+G PD +YN +I+ FC V+KG+ PD +Y+ +
Sbjct: 275 NEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMI 334
Query: 189 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 248
+ ++ EA LF +M R G SPD L+Y + + C +F +A + DEM+ KG+
Sbjct: 335 LGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGY 394
Query: 249 LP--DFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFC 306
P D + GF + LC ++E +++ + G++ +A +S +I C
Sbjct: 395 KPRRDRLEGF----------LQKLCESGKLEILSKVISSL-HRGIAGDADVWSVMIPTMC 443
Query: 307 QIGELGKAYELKIET 321
+ + + +L + T
Sbjct: 444 KEPVISDSIDLLLNT 458
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 111/274 (40%), Gaps = 31/274 (11%)
Query: 133 GILRAMAERGLS------PDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYS 186
G L M ER S PD +YN +I V K + P T+
Sbjct: 132 GELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFG 191
Query: 187 SLMEALCVEQRLSEAFDLFREMLRG-GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
+L+ LC + R+ EA + +ML+ GV P Y L+ A C +GE + AF L DE
Sbjct: 192 TLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYE 251
Query: 246 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
D Y+ LI L R E IL M E G P+ V+Y+ +I+GF
Sbjct: 252 GKIKVD--------AAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGF 303
Query: 306 CQIGELGKAYELKIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRAL 364
C +E + + A LDE L + +Y+ ++ + + A
Sbjct: 304 C------------VENDSESANRVLDEMVEKGLKPDVI---SYNMILGVFFRIKKWEEAT 348
Query: 365 QLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
L DM R G ++Y ++ +GL + + EA
Sbjct: 349 YLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEA 382
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 79/202 (39%), Gaps = 52/202 (25%)
Query: 258 PAIVTYN-----------------------------------ALIHGLCFLDRVEEALEI 282
P TYN LIHGLC RV+EAL++
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 283 LRGMPEM-GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL 341
M ++ G+ P Y+++I CQIGEL A++LK E + I +D Y +L+ SL
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKI-KVDAAIYSTLISSL 268
Query: 342 SYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRD 401
+ G + +MS G V Y+VLING + + A R
Sbjct: 269 -------------IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRV 315
Query: 402 LLYIASDGFLSMPSYTVYDILL 423
L + G P Y+++L
Sbjct: 316 LDEMVEKGL--KPDVISYNMIL 335
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 124/303 (40%), Gaps = 54/303 (17%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVI-------GWFCNLNKIDSAHTLLS 101
L LC+EG + EA LE + G +D SV GWF + K+ A L
Sbjct: 219 LDALCKEGHVREASMYLERI---GGTMDSNWVPSVRIFNILLNGWFRS-RKLKQAEKLWE 274
Query: 102 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR--AMAERGLS--------------- 144
EM A P+VVTY +L+ YCR V A+ +L MAE ++
Sbjct: 275 EMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAG 334
Query: 145 ------------------PDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYS 186
P + +YN ++ FC + +G+ P TY+
Sbjct: 335 RLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
Query: 187 SLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHK 246
+ + E +L+ +++ G SPD LTY +L C G+ + A ++ EM ++
Sbjct: 395 HFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNR 454
Query: 247 GFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFC 306
G PD ++T LIH LC L+ +EEA E G+ P +++ + +G
Sbjct: 455 GIDPD--------LLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLR 506
Query: 307 QIG 309
G
Sbjct: 507 SKG 509
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 11/184 (5%)
Query: 13 KMALNVNIYNGMIRGFATAAGKSDS----------ESKKVGEAFQSL-KRLCREGRIPEA 61
+M +N ++N +I G A S++ ES + SL K C+ G +P A
Sbjct: 315 EMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGA 374
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
++L++M +G+ TY+ +F NK + L ++I G SP +TY+ ++
Sbjct: 375 SKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKM 434
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 181
C + A+ + + M RG+ PD+ + +I C V +GI P
Sbjct: 435 LCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQ 494
Query: 182 AATY 185
T+
Sbjct: 495 YITF 498
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 114/278 (41%), Gaps = 31/278 (11%)
Query: 188 LMEALCVEQRLSEAFDLFREMLRGGVS----PDELTYTRLLNACCLVGEFTKAFHLHDEM 243
L++ALC E + EA ++ E + G + P + LLN + +A L +EM
Sbjct: 218 LLDALCKEGHVREA-SMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 244 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVIS 303
P +VTY LI G C + RV+ A+E+L M + N + ++ +I
Sbjct: 277 K--------AMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIID 328
Query: 304 GFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 363
G + G L +A + E + + +S TY+S++ ++ G++ A
Sbjct: 329 GLGEAGRLSEALGMM------------ERFF--VCESGPTIVTYNSLVKNFCKAGDLPGA 374
Query: 364 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 423
++ M G + Y+ K +T E + G P Y ++L
Sbjct: 375 SKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAG--HSPDRLTYHLIL 432
Query: 424 EN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHL 460
+ C + + +++ K+ R + D T T ++HL
Sbjct: 433 KMLCEDGKLSLAMQVNKEMKNRGIDPDLLTT-TMLIHL 469
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 148/350 (42%), Gaps = 25/350 (7%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
+E Y+ +I +D + EM ++G S SV +Y +L+ AY R + ++ +L
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV-DKGIFPDAATYSSLMEALCV 194
M +SP + +YN VI+ + +GI PD TY++L+ A +
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 195 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 254
EA +FR M GG+ PD TY+ L+ + K L EM G LPD
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD--- 316
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
I +YN L+ ++EA+ + M G +PNA +YS +++ F Q G
Sbjct: 317 -----ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDV 371
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 374
+L +E + D D TY+ ++ + G + + L HDM +
Sbjct: 372 RQLFLEMKSSNT---DPDAA-----------TYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 375 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 424
Y +I K +A++ L Y+ ++ + PS Y ++E
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIV--PSSKAYTGVIE 465
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 119/260 (45%), Gaps = 11/260 (4%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L REG + + ++ + M +G+ +Y+++I + + +++ LL M + SPS
Sbjct: 151 LGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPS 210
Query: 112 VVTYNSLVFAYCRRDSVD--KAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 169
++TYN+++ A C R +D +G+ M G+ PD+ +YN ++S
Sbjct: 211 ILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMV 269
Query: 170 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 229
D GI PD TYS L+E +RL + DL EM GG PD +Y LL A
Sbjct: 270 FRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAK 329
Query: 230 VGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 289
G +A + +M G +P TY+ L++ R ++ ++ M
Sbjct: 330 SGSIKEAMGVFHQMQ--------AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS 381
Query: 290 GLSPNAVSYSTVISGFCQIG 309
P+A +Y+ +I F + G
Sbjct: 382 NTDPDAATYNILIEVFGEGG 401
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 135/311 (43%), Gaps = 28/311 (9%)
Query: 60 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 119
EAE + M G+ D TYS ++ F L +++ LL EM + G P + +YN L+
Sbjct: 265 EAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLL 324
Query: 120 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 179
AY + S+ +A+G+ M G +P+ ++Y+ +++ F
Sbjct: 325 EAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTD 384
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
PDAATY+ L+E E LF +M+ + PD TY ++ AC G A +
Sbjct: 385 PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKI 444
Query: 240 HDEMIHKGFLPD-----------------------FVT----GFSPAIVTYNALIHGLCF 272
M +P F T G +P+I T+++L++
Sbjct: 445 LQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFAR 504
Query: 273 LDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDED 332
V+E+ IL + + G+ N +++ I + Q G+ +A + ++ E K+ DE
Sbjct: 505 GGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME-KSRCDPDER 563
Query: 333 TYDSLMDSLSY 343
T ++++ S+
Sbjct: 564 TLEAVLSVYSF 574
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 121/302 (40%), Gaps = 45/302 (14%)
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
P+ Y+ ++ L E L + ++F EM GVS +YT L+NA G + + L
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 240 HDEMIHKGFLPDFVT----------------------------GFSPAIVTYNALIHGLC 271
D M ++ P +T G P IVTYN L+
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDE 331
+EA + R M + G+ P+ +YS ++ F ++ L K +L E
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG------ 312
Query: 332 DTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 391
SL D S Y+ ++ Y G+++ A+ + H M G + YSVL+N +
Sbjct: 313 ----SLPDITS----YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 364
Query: 392 KARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSE-FKSLVELVKDYSMRDLSDDA 450
R + ++ L + S + P Y+IL+E FK +V L D ++ D
Sbjct: 365 SGRYDDVRQLFLEMKSSN--TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDM 422
Query: 451 AT 452
T
Sbjct: 423 ET 424
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 93/255 (36%), Gaps = 8/255 (3%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L+ + G I EA + M+ G + TYS ++ F + D L EM +
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P TYN L+ + + V + M E + PD+++Y +I
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARK 443
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
I P + Y+ ++EA EA F M G +P T+ LL +
Sbjct: 444 ILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA 503
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G ++ + ++ +G T+NA I + EEA++ M +
Sbjct: 504 RGGLVKESEAILSRLVD--------SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
Query: 289 MGLSPNAVSYSTVIS 303
P+ + V+S
Sbjct: 556 SRCDPDERTLEAVLS 570
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 131/292 (44%), Gaps = 15/292 (5%)
Query: 80 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 139
++ ++ C + LL M + P T+N L F +CR KA+ +L M
Sbjct: 237 FNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMI 295
Query: 140 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF---PDAATYSSLMEALCVEQ 196
E G P+ +Y I FC + KG P A T++ ++ AL
Sbjct: 296 EAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKND 355
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 256
+ E F+L M+ G PD TY ++ C+ + +A+ DEM +KG+ PD
Sbjct: 356 KAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD----- 410
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
IVTYN + LC + +EAL++ M E +P+ +Y+ +IS F ++ + A+
Sbjct: 411 ---IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFN 467
Query: 317 LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDH 368
E DK D +TY ++++ L D + + +L E + + L+L +
Sbjct: 468 TWTEM-DKRDCVQDVETYCAMINGLF--DCHRAKEACFLLEEVVNKGLKLPY 516
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 135/320 (42%), Gaps = 32/320 (10%)
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P + +N L+ A C+ V + +LR M R + PD +++N + +C
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGG---VSPDELTYTRLLN 225
++ G P+ TY + ++ C + EA DLF M+ G +P T+ ++
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 285
A + + F L MI G LPD + TY +I G+C ++V+EA + L
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPD--------VSTYKDVIEGMCMAEKVDEAYKFLDE 401
Query: 286 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYE- 344
M G P+ V+Y+ + C+ + +A +L Y +++S
Sbjct: 402 MSNKGYPPDIVTYNCFLRVLCENRKTDEALKL----------------YGRMVESRCAPS 445
Query: 345 -DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 403
TY+ +++ + + A +M + + Y +INGL R +EA L
Sbjct: 446 VQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLE 505
Query: 404 YIASDGFLSMPSYTVYDILL 423
+ + G L +P Y V+D L
Sbjct: 506 EVVNKG-LKLP-YRVFDSFL 523
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 79/197 (40%), Gaps = 1/197 (0%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L + + E +++ M G D TY VI C K+D A+ L EM KG+ P
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+VTYN + C D+A+ + M E +P V +YN +IS F
Sbjct: 411 IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWT 470
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ D TY +++ L R EA L E++ G+ + L VG
Sbjct: 471 EMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVG 530
Query: 232 EFTKAFHLHDEMIHKGF 248
KA H E + K +
Sbjct: 531 NL-KAIHKVSEHMKKFY 546
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 106/269 (39%), Gaps = 46/269 (17%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDE---RTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
C+ G + EA + + M KG + +T++ +I +K + L+ MI+ G
Sbjct: 313 FCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGC 372
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P V TY ++ C + VD+A L M+ +G PD+
Sbjct: 373 LPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDI--------------------- 411
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
TY+ + LC ++ EA L+ M+ +P TY L++
Sbjct: 412 --------------VTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFF 457
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
+ + AF+ EM + + D + TY A+I+GL R +EA +L +
Sbjct: 458 EMDDPDGAFNTWTEMDKRDCVQD--------VETYCAMINGLFDCHRAKEACFLLEEVVN 509
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYEL 317
GL + + + ++G L +++
Sbjct: 510 KGLKLPYRVFDSFLMRLSEVGNLKAIHKV 538
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 112/312 (35%), Gaps = 73/312 (23%)
Query: 128 VDKAVGILRAMAERGLS----------------PDVDSYNRVISKFCXXXXXXXXXXXXX 171
VD + ILR ER L+ P+++++N ++ C
Sbjct: 199 VDVLLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLR 258
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ + PDA T++ L C + +A L EM+ G P+ TY ++ C G
Sbjct: 259 RMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAG 317
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
+A L D MI KG +P T+ +I L D+ EE E++ M G
Sbjct: 318 MVDEAADLFDFMITKG-----SAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGC 372
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
P+ +Y VI G C ++ +AY+ +LDE
Sbjct: 373 LPDVSTYKDVIEGMCMAEKVDEAYK-----------FLDE-------------------- 401
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
MS GY V Y+ + L + +T EA + LY
Sbjct: 402 ------------------MSNKGYPPDIVTYNCFLRVLCENRKTDEALK--LYGRMVESR 441
Query: 412 SMPSYTVYDILL 423
PS Y++L+
Sbjct: 442 CAPSVQTYNMLI 453
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 116/511 (22%), Positives = 212/511 (41%), Gaps = 63/511 (12%)
Query: 64 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 123
+L+ M+ KGL DE T S+V+ + A +E+ + G+ P VTYN+L+ +
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 124 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 183
+ +A+ +L+ M E D +YN +++ + KG+ P+A
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
TY+++++A + EA LF M G P+ TY +L+ L+G+ +++ +EM
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS---LLGKKSRS----NEM 440
Query: 244 IHKGFLPDFVT-GFSPAIVTYNALIHGLC-------FLDRVEEALEILRGMPEMGLSPNA 295
I L D + G SP T+N ++ LC F++RV R M G P+
Sbjct: 441 IK--MLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRV------FREMKSCGFEPDR 491
Query: 296 VSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSY------------ 343
+++T+IS + + G A ++ E +A + TY++L+++L+
Sbjct: 492 DTFNTLISAYGRCGSEVDASKMYGEM-TRAGFNACVTTYNALLNALARKGDWRSGENVIS 550
Query: 344 ----------EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 393
E +YS ++ Y GN ++++ + S++ L+ K
Sbjct: 551 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 394 RTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRD-LSDDAAT 452
++R G+ P +++ +L + + E + + D LS D T
Sbjct: 611 ALAGSERAFTLFKKHGY--KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVT 668
Query: 453 AHTTMLH-------------LKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMV 499
++ M LK + K D YN +I CR + +A M EM
Sbjct: 669 YNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
Query: 500 HYGHAPHMFSVLALISALDDDRMYNEMSWVI 530
G P +F+ +S M+ E+ VI
Sbjct: 729 ERGIRPCIFTYNTFVSGYTAMGMFAEIEDVI 759
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 174/400 (43%), Gaps = 42/400 (10%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L RE + A ++L+ + + LD R Y++++ + K + A L M G SP+
Sbjct: 185 LGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPT 244
Query: 112 VVTYNSL--VFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 169
+VTYN + VF R S K +G+L M +GL D + + V+S
Sbjct: 245 LVTYNVILDVFGKMGR-SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEF 303
Query: 170 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 229
G P TY++L++ +EA + +EM D +TY L+ A
Sbjct: 304 FAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVR 363
Query: 230 VGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 289
G +A + + M KG +P+ +TY +I + +EAL++ M E
Sbjct: 364 AGFSKEAAGVIEMMTKKGVMPN--------AITYTTVIDAYGKAGKEDEALKLFYSMKEA 415
Query: 290 GLSPNAVSYSTVISGFCQIGELGKAYELKIE----------TEDKAIW-----WLDEDTY 334
G PN +Y+ V+S +G+ ++ E+ I+ + ++A W
Sbjct: 416 GCVPNTCTYNAVLS---LLGKKSRSNEM-IKMLCDMKSNGCSPNRATWNTMLALCGNKGM 471
Query: 335 DSL-------MDSLSYE---DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 384
D M S +E DT++++++ Y G+ A ++ +M+R G+ + Y+
Sbjct: 472 DKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNA 531
Query: 385 LINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 424
L+N L +K R + + + S GF P+ T Y ++L+
Sbjct: 532 LLNALARKGDWRSGENVISDMKSKGF--KPTETSYSLMLQ 569
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 2/192 (1%)
Query: 61 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 120
+E+ + K G D ++S++ F N D A +L + G SP +VTYNSL+
Sbjct: 615 SERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMD 674
Query: 121 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 180
Y RR KA IL+ + + L PD+ SYN VI FC ++GI P
Sbjct: 675 MYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
TY++ + +E D+ M + P+ELT+ +++ C G++++A
Sbjct: 735 CIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFV 794
Query: 241 DEMIHKGFLPDF 252
++ K F P F
Sbjct: 795 SKI--KTFDPCF 804
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 130/319 (40%), Gaps = 23/319 (7%)
Query: 19 NIYNGMIRGFATAAGKSDSESKKVGEAFQS------------LKRLCREGRIPEAEQMLE 66
+ +N +I + + D+ SK GE ++ L L R+G E ++
Sbjct: 492 DTFNTLISAYGRCGSEVDA-SKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVIS 550
Query: 67 VMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRD 126
MK KG E +YS ++ + + + + PS + +L+ A +
Sbjct: 551 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 127 SVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYS 186
++ + + G PD+ +N ++S F + G+ PD TY+
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670
Query: 187 SLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHK 246
SLM+ +A ++ + + + + PD ++Y ++ C G +A + EM +
Sbjct: 671 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730
Query: 247 GFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFC 306
G P I TYN + G + E +++ M + PN +++ V+ G+C
Sbjct: 731 GI--------RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYC 782
Query: 307 QIGELGKAYEL--KIETED 323
+ G+ +A + KI+T D
Sbjct: 783 RAGKYSEAMDFVSKIKTFD 801
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 131/317 (41%), Gaps = 51/317 (16%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L L ++ R E +ML MK G + T+++++ N + + EM + GF
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGF 487
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P T+N+L+ AY R S A + M G + V +YN +++
Sbjct: 488 EPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGEN 547
Query: 169 XXXXXVDKGIFPDAATYSSLMEALC----------VEQRLSE------------------ 200
KG P +YS +++ +E R+ E
Sbjct: 548 VISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANF 607
Query: 201 ----------AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 250
AF LF+ + G PD + + +L+ FT+ +++D+ +G L
Sbjct: 608 KCRALAGSERAFTLFK---KHGYKPDMVIFNSMLSI------FTRN-NMYDQA--EGILE 655
Query: 251 DFVT-GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG 309
G SP +VTYN+L+ +A EIL+ + + L P+ VSY+TVI GFC+ G
Sbjct: 656 SIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRG 715
Query: 310 ELGKAYELKIETEDKAI 326
+ +A + E ++ I
Sbjct: 716 LMQEAVRMLSEMTERGI 732
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 141/329 (42%), Gaps = 26/329 (7%)
Query: 71 KGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDK 130
K L+ T+ V+ + K+D A + M P++V +N L+ A C+ +V K
Sbjct: 162 KKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRK 221
Query: 131 AVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLME 190
A + M +R +PD +Y+ ++ + +D G PD TYS +++
Sbjct: 222 AQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVD 280
Query: 191 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 250
LC R+ EA + R M P Y+ L++ +A EM G
Sbjct: 281 ILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKA 340
Query: 251 DFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGE 310
D + +N+LI C +R++ +L+ M G++PN+ S + ++ + GE
Sbjct: 341 D--------VAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGE 392
Query: 311 LGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYE-DTYSSVMNDYLAEGNMQRALQLDHD 369
+A+ D + ++ + DTY+ V+ + + M+ A ++
Sbjct: 393 KDEAF----------------DVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKY 436
Query: 370 MSRDGYLSSYVAYSVLINGLHKKARTREA 398
M + G S +SVLINGL ++ T++A
Sbjct: 437 MRKKGVFPSMHTFSVLINGLCEERTTQKA 465
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 9/245 (3%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
+E +P+A ++ M G D TYS ++ C ++D A ++ M P+
Sbjct: 249 KEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 308
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
Y+ LV Y + +++AV M G+ DV +N +I FC
Sbjct: 309 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 368
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
KG+ P++ + + ++ L EAFD+FR+M++ PD TYT ++ C E
Sbjct: 369 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEM 427
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
A + M KG P++ T++ LI+GLC ++A +L M EMG+ P
Sbjct: 428 ETADKVWKYMRKKGVF--------PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRP 479
Query: 294 NAVSY 298
+ V++
Sbjct: 480 SGVTF 484
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 142/347 (40%), Gaps = 61/347 (17%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVI-GWFCNLNKIDSAHTLLSEMIAKG 107
L LC+ + +A+++ E M+ + D +TYS ++ GW N + A + EMI G
Sbjct: 210 LSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPN-LPKAREVFREMIDAG 267
Query: 108 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
P +VTY+ +V C+ VD+A+GI+R+M P + C
Sbjct: 268 CHPDIVTYSIMVDILCKAGRVDEALGIVRSM-----DPSI----------CK-------- 304
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
P YS L+ E RL EA D F EM R G+ D + L+ A
Sbjct: 305 ------------PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 352
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
C + + EM KG P+ + N ++ L +EA ++ R M
Sbjct: 353 CKANRMKNVYRVLKEMKSKGVTPNSKSC--------NIILRHLIERGEKDEAFDVFRKMI 404
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 347
++ P+A +Y+ VI FC+ E+ ET DK +W Y T+
Sbjct: 405 KV-CEPDADTYTMVIKMFCEKKEM--------ETADK-VW-----KYMRKKGVFPSMHTF 449
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR 394
S ++N E Q+A L +M G S V + L L K+ R
Sbjct: 450 SVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 105/249 (42%), Gaps = 42/249 (16%)
Query: 260 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKI 319
+ T+ ++ +V+EA+ M + L PN V+++ ++S C+ + KA E+
Sbjct: 168 VETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEV-- 225
Query: 320 ETEDKAIWWLDEDTYDSLMDSLSYE-DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 378
++++ D + + TYS ++ + E N+ +A ++ +M G
Sbjct: 226 --------------FENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPD 271
Query: 379 YVAYSVLINGLHKKARTREAKRDLLYIAS-DGFLSMPSYTVYDILLENCSNSEFKSLVEL 437
V YS++++ L K R EA L + S D + P+ +Y +L
Sbjct: 272 IVTYSIMVDILCKAGRVDEA---LGIVRSMDPSICKPTTFIYSVL--------------- 313
Query: 438 VKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYME 497
V Y + ++A T L ++ K D ++N LI C+++ + Y + E
Sbjct: 314 VHTYGTENRLEEAVD---TFLEMER---SGMKADVAVFNSLIGAFCKANRMKNVYRVLKE 367
Query: 498 MVHYGHAPH 506
M G P+
Sbjct: 368 MKSKGVTPN 376
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 146/359 (40%), Gaps = 59/359 (16%)
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
G D TY++++G + + LL EM+ G P+ VTYN L+ +Y R + + +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 132 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 191
+ + M E G PD RV TY +L++
Sbjct: 414 MNVFNQMQEAGCEPD-----RV------------------------------TYCTLIDI 438
Query: 192 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 251
L A D+++ M G+SPD TY+ ++N G A L EM+ +G P+
Sbjct: 439 HAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPN 498
Query: 252 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGEL 311
+VT+N +I E AL++ R M G P+ V+YS V+ G L
Sbjct: 499 --------LVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFL 550
Query: 312 GKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMS 371
+A + E + K W DE Y L+D + GN+ +A Q M
Sbjct: 551 EEAEGVFAEMQRKN-WVPDEPVYGLLVDL-------------WGKAGNVDKAWQWYQAML 596
Query: 372 RDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSE 430
+ G + + L++ + R EA L + + G PS Y +LL C+++
Sbjct: 597 QAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGL--HPSLQTYTLLLSCCTDAR 653
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 10/267 (3%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L R + E ++L+ M G + TY+ +I + N + A + ++M G P
Sbjct: 369 LGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPD 428
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VTY +L+ + + +D A+ + + M E GLSPD +Y+ +I+
Sbjct: 429 RVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFC 488
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSE-AFDLFREMLRGGVSPDELTYTRLLNACCLV 230
V +G P+ T+ ++M AL + R E A L+R+M G PD++TY+ ++
Sbjct: 489 EMVGQGCTPNLVTF-NIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC 547
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
G +A + EM K ++PD P Y L+ V++A + + M + G
Sbjct: 548 GFLEEAEGVFAEMQRKNWVPD-----EP---VYGLLVDLWGKAGNVDKAWQWYQAMLQAG 599
Query: 291 LSPNAVSYSTVISGFCQIGELGKAYEL 317
L PN + ++++S F ++ + +AY L
Sbjct: 600 LRPNVPTCNSLLSTFLRVHRMSEAYNL 626
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 106/257 (41%), Gaps = 54/257 (21%)
Query: 61 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 120
A M + M+ GL D TYS +I + +AH L EM+ +G +P++VT+N ++
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 121 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 180
+ + + + A+ + R M G P
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQP----------------------------------- 532
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
D TYS +ME L L EA +F EM R PDE Y L++ G KA+ +
Sbjct: 533 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
M+ G P+ + T N+L+ + R+ EA +L+ M +GL P+ +Y+
Sbjct: 593 QAMLQAGLRPN--------VPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTL 644
Query: 301 VIS-----------GFC 306
++S GFC
Sbjct: 645 LLSCCTDARSNFDMGFC 661
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 130/325 (40%), Gaps = 40/325 (12%)
Query: 212 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 271
G D TYT ++ +F + L DEM+ G P+ VTYN LIH
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPN--------TVTYNRLIHSYG 405
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDE 331
+ ++EA+ + M E G P+ V+Y T+I + G L A ++ ++ L
Sbjct: 406 RANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAG---LSP 462
Query: 332 DTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 391
DT+ TYS ++N G++ A +L +M G + V ++++I LH
Sbjct: 463 DTF-----------TYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI-ALHA 510
Query: 392 KARTREAKRDLLY-IASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDA 450
KAR E L + + GF P Y I++E + F E V R
Sbjct: 511 KARNYETALKLYRDMQNAGF--QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPD 568
Query: 451 ATAHTTMLHLKNKTDGENKT--------DGGMY------NLLIFEHCRSHNVHKAYNMYM 496
+ ++ L K +K G+ N L+ R H + +AYN+
Sbjct: 569 EPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQ 628
Query: 497 EMVHYGHAPHMFSVLALISALDDDR 521
M+ G P + + L+S D R
Sbjct: 629 SMLALGLHPSLQTYTLLLSCCTDAR 653
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 120/296 (40%), Gaps = 28/296 (9%)
Query: 80 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 139
Y++V+ + +D A M + P V T+N L+ YCR D A+ + R M
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 140 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 199
E+G P+V S+N +I F ++ G AT L++ LC E R+
Sbjct: 256 EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVD 315
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV------ 253
+A L ++L V P E Y L+ C + +A + +E+ KG P F+
Sbjct: 316 DACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLV 375
Query: 254 ---------------------TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
G P VT+N L+ LC D +A + G
Sbjct: 376 EGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYE 435
Query: 293 PNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
P+ +Y ++SGF + G + L E DK + D TY+ LMD LS +S
Sbjct: 436 PDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDM-LPDIFTYNRLMDGLSCTGKFS 490
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 139/325 (42%), Gaps = 25/325 (7%)
Query: 77 ERTYSSVIGWFCNLNKIDSAHTLLSEM--IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 134
E + S I +C K+D A M + G P+V YN++V Y + +DKA+
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALRF 215
Query: 135 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 194
+ M + PDV ++N +I+ +C +KG P+ ++++L+
Sbjct: 216 YQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLS 275
Query: 195 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 254
++ E + EM+ G E T L++ C G A L ++++K L
Sbjct: 276 SGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVL----- 330
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
P+ Y +L+ LC ++ A+E++ + + G +P ++ +T++ G + G KA
Sbjct: 331 ---PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKA 387
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 374
+ + I DS+ +L D SS D+ + N R L S G
Sbjct: 388 SGFMEKMMNAGIL------PDSVTFNLLLRDLCSS---DHSTDANRLRLLA-----SSKG 433
Query: 375 YLSSYVAYSVLINGLHKKARTREAK 399
Y Y VL++G K+ R +E +
Sbjct: 434 YEPDETTYHVLVSGFTKEGRRKEGE 458
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 99/231 (42%), Gaps = 13/231 (5%)
Query: 17 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKR------------LCREGRIPEAEQM 64
NV +N +IRGF ++ GK + K E + R LCREGR+ +A +
Sbjct: 262 NVVSFNTLIRGFLSS-GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGL 320
Query: 65 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 124
+ + K + E Y S++ C NK A ++ E+ KG +P + +LV +
Sbjct: 321 VLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRK 380
Query: 125 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 184
+KA G + M G+ PD ++N ++ C KG PD T
Sbjct: 381 SGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETT 440
Query: 185 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
Y L+ E R E L EML + PD TY RL++ G+F++
Sbjct: 441 YHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 41/282 (14%)
Query: 177 GIF--PD-AATYSSLMEALCVEQRLSEA---FDLFREMLRGGVSPDELTYTRLLNACCLV 230
GIF P+ + S ++A C +++ A FD + ++ G P+ Y ++N
Sbjct: 149 GIFSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDG--KPNVGVYNTVVNGYVKS 206
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
G+ KA + M + PD + T+N LI+G C + + AL++ R M E G
Sbjct: 207 GDMDKALRFYQRMGKERAKPD--------VCTFNILINGYCRSSKFDLALDLFREMKEKG 258
Query: 291 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDT---- 346
PN VS++T+I GF G++ + ++ E + + E T + L+D L E
Sbjct: 259 CEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRF-SEATCEILVDGLCREGRVDDA 317
Query: 347 ------------------YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 388
Y S++ E RA+++ ++ + G ++A + L+ G
Sbjct: 318 CGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEG 377
Query: 389 LHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSE 430
L K RT +A + + + G L P +++LL + +S+
Sbjct: 378 LRKSGRTEKASGFMEKMMNAGIL--PDSVTFNLLLRDLCSSD 417
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 12/278 (4%)
Query: 47 QSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 106
Q L LC + + A++ K G+ +TYS ++ + + A + EM+ +
Sbjct: 178 QLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLER 237
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
++ YN+L+ A C+ VD + + M GL PD S+ I +C
Sbjct: 238 NCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSA 297
Query: 167 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
+ P+ T++ +++ LC +++ +A+ L EM++ G +PD TY ++
Sbjct: 298 YKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAY 357
Query: 227 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 286
C E +A L M LPD TYN ++ L + R + A EI GM
Sbjct: 358 HCDHCEVNRATKLLSRMDRTKCLPD--------RHTYNMVLKLLIRIGRFDRATEIWEGM 409
Query: 287 PEMGLSPNAVSYSTVISGFC----QIGELGKAYELKIE 320
E P +Y+ +I G ++ E + +E+ I+
Sbjct: 410 SERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMID 447
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 61 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 120
A ++ + M + +D Y++++ C +D + + EM G P ++ +
Sbjct: 227 ARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIH 286
Query: 121 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 180
AYC V A +L M L P+V ++N +I C + KG P
Sbjct: 287 AYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANP 346
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
D TY+S+M C ++ A L M R PD TY +L +G F +A +
Sbjct: 347 DTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIW 406
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLD-RVEEALEILRGMPEMGLSPNAVSYS 299
+ M + F P + TY +IHGL ++EEA M + G+ P YS
Sbjct: 407 EGMSERKFY--------PTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP----YS 454
Query: 300 TVI 302
T +
Sbjct: 455 TTV 457
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 3/180 (1%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C G + A ++L+ MK L + T++ +I C K+D A+ LL EMI KG +P
Sbjct: 289 CDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDT 348
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
TYNS++ +C V++A +L M PD +YN V+
Sbjct: 349 WTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEG 408
Query: 173 XVDKGIFPDAATYSSLMEALCVEQ-RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
++ +P ATY+ ++ L ++ +L EA F M+ G+ P T L N LVG
Sbjct: 409 MSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNR--LVG 466
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 125/309 (40%), Gaps = 68/309 (22%)
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
V+ GI P L+ +LC ++ ++ A + F + G+ P TY+ L+ + +
Sbjct: 165 VEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDA 224
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
+ A + DEM+ + + D ++ YNAL+ LC V+ ++ + M +GL P
Sbjct: 225 SGARKVFDEMLERNCVVD--------LLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKP 276
Query: 294 NAVSYSTVISGFCQIGELGKAYEL------------------------KIETEDKAIWWL 329
+A S++ I +C G++ AY++ K E D A L
Sbjct: 277 DAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLL 336
Query: 330 DED----------TYDSLM----------------------DSLSYEDTYSSVMNDYLAE 357
DE TY+S+M L TY+ V+ +
Sbjct: 337 DEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRI 396
Query: 358 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGL-HKKARTREAKRDLLYIASDGFLSMPSY 416
G RA ++ MS + + Y+V+I+GL KK + EA R + +G +P Y
Sbjct: 397 GRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEG---IPPY 453
Query: 417 TVYDILLEN 425
+ +L N
Sbjct: 454 STTVEMLRN 462
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 154/360 (42%), Gaps = 28/360 (7%)
Query: 57 RIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYN 116
R E Q+ + M + F++E+TY ++ + +K+D A + G +V ++
Sbjct: 158 RFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFH 217
Query: 117 SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 176
L+ CR V+ A + R D+ + N +++ +C +
Sbjct: 218 GLLMWLCRYKHVEFAETLF-CSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIAS 276
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
PD +Y +++ AL + +L +A +L+R M +PD +++A C +A
Sbjct: 277 KCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEA 336
Query: 237 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG--LSPN 294
+ E+ KG PD P +VTYN+L+ LC + R E+ E++ M G SPN
Sbjct: 337 LEVFREISEKG--PD------PNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPN 388
Query: 295 AVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDY 354
V++S ++ + + K ++ +E K + D Y+ LM L Y
Sbjct: 389 DVTFSYLL----KYSQRSKDVDIVLERMAKNKCEMTSDLYN-LMFRL------------Y 431
Query: 355 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMP 414
+ ++ ++ +M R G Y++ I+GLH K + EA + S G + P
Sbjct: 432 VQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEP 491
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 14/265 (5%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LCR + AE + + + D + + ++ +C L + A ++IA P
Sbjct: 223 LCRYKHVEFAETLF-CSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPD 281
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VV+Y +++ A ++ + KA+ + RAM + +PDV N VI C
Sbjct: 282 VVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFR 341
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM-LRGG-VSPDELTYTRLLNACCL 229
+KG P+ TY+SL++ LC +R + ++L EM L+GG SP+++T++ LL
Sbjct: 342 EISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLK---- 397
Query: 230 VGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 289
+ +K + E + K + + YN + D+ E+ EI M
Sbjct: 398 YSQRSKDVDIVLERMAKNKC-EMTSDL------YNLMFRLYVQWDKEEKVREIWSEMERS 450
Query: 290 GLSPNAVSYSTVISGFCQIGELGKA 314
GL P+ +Y+ I G G++G+A
Sbjct: 451 GLGPDQRTYTIRIHGLHTKGKIGEA 475
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG--FS 109
LC + RIPEA ++ + KG + TY+S++ C + + + L+ EM KG S
Sbjct: 327 LCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCS 386
Query: 110 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 169
P+ VT++ L+ R VD +L MA+ D YN + +
Sbjct: 387 PNDVTFSYLLKYSQRSKDVD---IVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREI 443
Query: 170 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELT 219
G+ PD TY+ + L + ++ EA F+EM+ G+ P+ T
Sbjct: 444 WSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 145/384 (37%), Gaps = 61/384 (15%)
Query: 185 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN---------ACCLVGEFTK 235
Y+ +++ L +R E +F EM + +E TY LLN V E K
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 236 AFHLHDEMI-------------HKGFLPDFVTG----FSPAIVTYNALIHGLCFLDRVEE 278
F + D+++ H F F I N +++G C L V E
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHE 265
Query: 279 ALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLM 338
A + + P+ VSY T+I+ + G+LGKA EL Y ++
Sbjct: 266 AKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMEL----------------YRAMW 309
Query: 339 DSLSYEDTY--SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTR 396
D+ D ++V++ + + AL++ ++S G + V Y+ L+ L K RT
Sbjct: 310 DTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTE 369
Query: 397 EAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTT 456
+ + + G P+ + LL+ S+ V++V + ++ + + +
Sbjct: 370 KVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKD---VDIVLERMAKNKCEMTSDLYNL 426
Query: 457 MLHLKNKTDGENKT--------------DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYG 502
M L + D E K D Y + I + +A + + EM+ G
Sbjct: 427 MFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 486
Query: 503 HAPHMFSVLALISALDDDRMYNEM 526
P + + L R+ ++M
Sbjct: 487 MVPEPRTEMLLNQNKTKPRVEDKM 510
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 161/377 (42%), Gaps = 47/377 (12%)
Query: 27 GFATAAGKSDSESKKVGEAFQSLKRLCREG--------------RIPEAEQ---MLEVMK 69
G ++ DS++ K+ + + KR C R+ EA++ + EV++
Sbjct: 52 GGQSSNDAKDSKNSKLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQ 111
Query: 70 CKGLFLDERTYSSVIG---WFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRD 126
+ F D ++ VI + + AH L EM +V ++N+L+ AY
Sbjct: 112 YQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSK 171
Query: 127 SVDKAVGILRAMAER-GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
+D+A+ + + E+ G++PD+ +YN +I C G PD ++
Sbjct: 172 KLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISF 231
Query: 186 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
++L+E + E ++ M +SP+ +Y + +FT A +L D M
Sbjct: 232 NTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKT 291
Query: 246 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
+G PD + TYNALI + +EE ++ M E GL+P+ V+Y +I
Sbjct: 292 EGISPD--------VHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLL 343
Query: 306 CQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQ 365
C+ G+L +A +E ++AI LS + Y V+ + G + A Q
Sbjct: 344 CKKGDLDRA----VEVSEEAIKH----------KLLSRPNMYKPVVERLMGAGKIDEATQ 389
Query: 366 LDHDMSRDGYLSSYVAY 382
L ++G L SY Y
Sbjct: 390 L----VKNGKLQSYFRY 402
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 27/213 (12%)
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRG-GVSPDELTYTRLLNACCLVGEFTKAFHLHDE 242
++++L+ A ++L EA F+E+ G++PD +TY ++ A C G + +E
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 243 MIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVI 302
+ GF PD ++++N L+ + E I M LSPN SY++ +
Sbjct: 219 LEKNGFEPD--------LISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRV 270
Query: 303 SGFCQIGELGKAYEL--KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM 360
G + + A L ++TE + D + TY++++ Y + N+
Sbjct: 271 RGLTRNKKFTDALNLIDVMKTE-----GISPDVH-----------TYNALITAYRVDNNL 314
Query: 361 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 393
+ ++ ++M G V Y +LI L KK
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKG 347
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 8/231 (3%)
Query: 87 FCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPD 146
C+ +A + + +M+ G +P +YNS++ + + ++ ++ + E PD
Sbjct: 487 LCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPD 546
Query: 147 VDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFR 206
VD+Y V+++ C + G+ P A YSS++ +L + R+ EA + F
Sbjct: 547 VDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFA 606
Query: 207 EMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNAL 266
+ML G+ PDE+ Y ++N G +A L +E++ K FL P+ TY L
Sbjct: 607 KMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVV-KHFL-------RPSSFTYTVL 658
Query: 267 IHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
I G + +E+ + L M E GLSPN V Y+ +I F + G+ ++ L
Sbjct: 659 ISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTL 709
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/481 (21%), Positives = 186/481 (38%), Gaps = 88/481 (18%)
Query: 13 KMALNVNIYNGMIRGFATAAGKSDSES---------KKVGEAFQS--LKRLCREGRIPEA 61
+M L VN+Y + F +++E+ V + + +K C++ + A
Sbjct: 232 RMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMA 291
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
++ M + LD ++++I F L +D + S+MI KG +V TY+ ++ +
Sbjct: 292 MRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGS 351
Query: 122 YCRRDSVDKAVGI-LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 180
YC+ +VD A+ + + +S +V Y +I F +D GI P
Sbjct: 352 YCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVP 411
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRG--GVSPD--------ELTYTRLL------ 224
D TY L++ L L A + + +L G++P E+ LL
Sbjct: 412 DHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARK 471
Query: 225 -------------NACCLVGEFTKAFHLHDEMIHKGFLP-------------------DF 252
A C + A ++M++ G P D
Sbjct: 472 DANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDL 531
Query: 253 VT--------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISG 304
+ F P + TY +++ LC + + A I+ M E+GL P YS++I
Sbjct: 532 ASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIG- 590
Query: 305 FCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQR 362
+G+ G+ E E+T+ +++S D Y ++N Y G +
Sbjct: 591 --SLGKQGRVVE-------------AEETFAKMLESGIQPDEIAYMIMINTYARNGRIDE 635
Query: 363 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDIL 422
A +L ++ + S Y+VLI+G K + + L + DG P+ +Y L
Sbjct: 636 ANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGL--SPNVVLYTAL 693
Query: 423 L 423
+
Sbjct: 694 I 694
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 159/428 (37%), Gaps = 54/428 (12%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C+ G EAE + + M+ G ++D+ Y+ ++ +C N + A L M+ + F
Sbjct: 247 FCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELD 306
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+N+L+ + + +DK + M ++G+ +V +Y+ +I +C
Sbjct: 307 PCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFV 366
Query: 172 XXV-DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
+ I + Y++L+ + + +A DL ML G+ PD +TY LL
Sbjct: 367 NNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKC 426
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAI---------------------------VTY 263
E A + ++ G G +P + V
Sbjct: 427 HELKYAMVILQSILDNG------CGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGL 480
Query: 264 NALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETED 323
+ LC AL + M +G +P SY++VI Q E IE
Sbjct: 481 AVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQ--------ENIIEDLA 532
Query: 324 KAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 383
+ + E +D + DTY V+N+ + + A + M G + YS
Sbjct: 533 SLVNIIQE------LDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYS 586
Query: 384 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL----ENCSNSEFKSLVELVK 439
+I L K+ R EA+ + G P Y I++ N E LVE V
Sbjct: 587 SIIGSLGKQGRVVEAEETFAKMLESGI--QPDEIAYMIMINTYARNGRIDEANELVEEVV 644
Query: 440 DYSMRDLS 447
+ +R S
Sbjct: 645 KHFLRPSS 652
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 157/409 (38%), Gaps = 72/409 (17%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L ++GR+ EAE+ M G+ DE Y +I + +ID A+ L+ E++ PS
Sbjct: 592 LGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPS 651
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
TY L+ + + ++K L M E GLSP+V Y +I F
Sbjct: 652 SFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFG 711
Query: 172 XXVDKGIFPDAATYSSLMEAL------------CVE-------QRL-------------- 198
+ I D Y +L+ L VE QRL
Sbjct: 712 LMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLG 771
Query: 199 ---SEAFDL-FREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 254
S++F + ++ + P+ + ++ C G +A++ + M +G +P+
Sbjct: 772 NYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPN--- 828
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
+VTY L+ +E A+++ G P+ V YST++ G C A
Sbjct: 829 -----LVTYTILMKSHIEAGDIESAIDLFEG---TNCEPDQVMYSTLLKGLCDFKRPLDA 880
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 374
L +E + I ++D+Y+ L+ L Y A+++ DM+
Sbjct: 881 LALMLEMQKSGINP-NKDSYEKLLQCLCYSRL-------------TMEAVKVVKDMAALD 926
Query: 375 YLSSYVAYSVLINGLHKKARTREAK----------RDLLYIASDGFLSM 413
+ ++ LI L ++ + REA+ R LL G L M
Sbjct: 927 IWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRSLLNCTKPGLLKM 975
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 174/463 (37%), Gaps = 55/463 (11%)
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
G+ D S++ L + D A L +IA G++PS + + +V C +D +A
Sbjct: 126 GIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEA 185
Query: 132 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP-DAATYSSLME 190
+ ERG + R+ C P Y SL
Sbjct: 186 FHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFY 245
Query: 191 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 250
C +EA LF M G D++ YT L+ C T A L+ M+ + F
Sbjct: 246 CFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFEL 305
Query: 251 DFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGE 310
D P I +N LIHG L +++ + M + G+ N +Y +I +C+ G
Sbjct: 306 D------PCI--FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGN 357
Query: 311 LGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDM 370
+ A L + ED ++ Y++++ + +G M +A+ L M
Sbjct: 358 VDYALRLFVNNTG------SEDISRNV-------HCYTNLIFGFYKKGGMDKAVDLLMRM 404
Query: 371 SRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSE 430
+G + ++ Y VL+ L K + A L I +G P ++++ N E
Sbjct: 405 LDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPP------VIDDLGNIE 458
Query: 431 FKSLVELVKDYSMRD--LSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNV 488
K + L+ + + +D L+ TT L C N
Sbjct: 459 VK-VESLLGEIARKDANLAAVGLAVVTTAL------------------------CSQRNY 493
Query: 489 HKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVIN 531
A + +MV+ G P FS ++I L + + +++ ++N
Sbjct: 494 IAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVN 536
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 181/443 (40%), Gaps = 52/443 (11%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K L +E I + ++ +++ D TY V+ C N D+A ++ M G
Sbjct: 519 IKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGL 578
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P+V Y+S++ + ++ V +A M E G+ PD +Y +I+ +
Sbjct: 579 RPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANE 638
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
V + P + TY+ L+ + + +ML G+SP+ + YT L+
Sbjct: 639 LVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFL 698
Query: 229 LVGEFTKAFHL----------HDEMIHKGFLPDFVTGFS----PAIVTYNALIHGLCFLD 274
G+F +F L HD + + L + ++ L L
Sbjct: 699 KKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLI 758
Query: 275 RVEE----------------ALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELK 318
R + A+E++ G + + PN ++T+I+G+C G L +AY
Sbjct: 759 RTKPLVSIPSSLGNYGSKSFAMEVI-GKVKKSIIPNLYLHNTIITGYCAAGRLDEAYN-H 816
Query: 319 IETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 378
+E+ K E +L+ TY+ +M ++ G+++ A+ L + +
Sbjct: 817 LESMQK------EGIVPNLV-------TYTILMKSHIEAGDIESAIDLFEGTNCE---PD 860
Query: 379 YVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVEL 437
V YS L+ GL R +A +L + G P+ Y+ LL+ C + V++
Sbjct: 861 QVMYSTLLKGLCDFKRPLDALALMLEMQKSGI--NPNKDSYEKLLQCLCYSRLTMEAVKV 918
Query: 438 VKDYSMRDLSDDAATAHTTMLHL 460
VKD + D+ + HT ++++
Sbjct: 919 VKDMAALDIWPRSIN-HTWLIYI 940
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 107/271 (39%), Gaps = 20/271 (7%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC + R EA E +K +G L + C ++ A +L + P
Sbjct: 176 LCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPL 235
Query: 112 VVT-YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
V Y SL + +C+R +A + M G D Y ++ ++C
Sbjct: 236 PVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLY 295
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
V++ D +++L+ L + +F +M++ GV + TY ++ + C
Sbjct: 296 LRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKE 355
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTG---FSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
G A L F+ + TG S + Y LI G +++A+++L M
Sbjct: 356 GNVDYALRL--------FVNN--TGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRML 405
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELK 318
+ G+ P+ ++Y F + L K +ELK
Sbjct: 406 DNGIVPDHITY------FVLLKMLPKCHELK 430
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 116/271 (42%), Gaps = 17/271 (6%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
G EAE++ M G+ D +YSS+I + ++ L M + P Y
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 340
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAE-RGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 174
N++V A + V +A +++ M E +G+ P+V +YN +I C +
Sbjct: 341 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 234
+KG+FP TY + M L + E F+L +M + G P TY L+ C +F
Sbjct: 401 EKGLFPTIRTYHAFMRILRTGE---EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFD 457
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
L DEM K PD + +Y +IHGL ++EEA + M + G+ PN
Sbjct: 458 NVLLLWDEMKEKTVGPD--------LSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Query: 295 AVSYSTVISGFCQIGELGKAYELKIETEDKA 325
+ S F GK Y + T+ K
Sbjct: 510 ENVEDMIQSWFS-----GKQYAEQRITDSKG 535
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 21/287 (7%)
Query: 46 FQSL-KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCN-LNKIDSAHTLLSEM 103
FQSL LCR + +A ++ K K F D ++++ V+ +CN + A + EM
Sbjct: 235 FQSLLSALCRYKNVSDAGHLIFCNKDKYPF-DAKSFNIVLNGWCNVIGSPREAERVWMEM 293
Query: 104 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXX-X 162
G VV+Y+S++ Y + S++K + + M + + PD YN V+
Sbjct: 294 GNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFV 353
Query: 163 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTY-- 220
+KGI P+ TY+SL++ LC ++ EA +F EML G+ P TY
Sbjct: 354 SEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHA 413
Query: 221 -TRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEA 279
R+L GE + F L +M G P + TY LI LC +
Sbjct: 414 FMRILRT----GE--EVFELLAKMRK--------MGCEPTVETYIMLIRKLCRWRDFDNV 459
Query: 280 LEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAI 326
L + M E + P+ SY +I G G++ +AY E +DK +
Sbjct: 460 LLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGM 506
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 16/264 (6%)
Query: 69 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF---AYCRR 125
K +G R Y S+I + K D+A TL+ EM + FSPS+V +L+ YC
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAV 210
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
V KA+ A L +D + ++S C DK F DA ++
Sbjct: 211 HDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPF-DAKSF 269
Query: 186 SSLMEALC-VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 244
+ ++ C V EA ++ EM GV D ++Y+ +++ G K L D M
Sbjct: 270 NIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMK 329
Query: 245 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE-MGLSPNAVSYSTVIS 303
+ PD YNA++H L V EA +++ M E G+ PN V+Y+++I
Sbjct: 330 KECIEPDRKV--------YNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIK 381
Query: 304 GFCQIGELGKAYELKIETEDKAIW 327
C+ + +A ++ E +K ++
Sbjct: 382 PLCKARKTEEAKQVFDEMLEKGLF 405
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 52 LCREGRIPEAEQMLEVMKC-KGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 110
L + + EA +++ M+ KG+ + TY+S+I C K + A + EM+ KG P
Sbjct: 347 LAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFP 406
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
++ TY++ + + V + + +R M G P V++Y +I K C
Sbjct: 407 TIRTYHAFMRILRTGEEVFELLAKMRKM---GCEPTVETYIMLIRKLCRWRDFDNVLLLW 463
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDE 217
+K + PD ++Y ++ L + ++ EA+ ++EM G+ P+E
Sbjct: 464 DEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNE 510
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 8/264 (3%)
Query: 51 RLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 110
R+ E RI E+ +L+ + K + +D YS V+ + SA + EM+ +GFS
Sbjct: 278 RVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSA 337
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
+ Y V C + V +A +L M E G+SP +++N +I F
Sbjct: 338 NSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYC 397
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
V +G+ P + ++ +++++ + ++ A ++ + + G PDE TY+ L+
Sbjct: 398 EVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEG 457
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
+ +A L EM ++ SP + +LI GLC +VE + L+ M +
Sbjct: 458 NDIDQALKLFYEMEYR--------KMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRL 509
Query: 291 LSPNAVSYSTVISGFCQIGELGKA 314
+ PNA Y +I F +IG+ A
Sbjct: 510 IEPNADIYDALIKAFQKIGDKTNA 533
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 8/252 (3%)
Query: 71 KGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDK 130
K ++ +E T +I C ++ LL + K PSV+ SLVF +++
Sbjct: 228 KRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEE 287
Query: 131 AVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLME 190
++ +L+ + + + D Y+ V+ + +G ++ Y+ +
Sbjct: 288 SMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVR 347
Query: 191 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 250
C + + EA L EM GVSP + T+ L+ G K + M+ +G +P
Sbjct: 348 VCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMP 407
Query: 251 DFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGE 310
+ +N ++ + ++ V A EIL + G P+ +YS +I GF + +
Sbjct: 408 --------SCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGND 459
Query: 311 LGKAYELKIETE 322
+ +A +L E E
Sbjct: 460 IDQALKLFYEME 471
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 138/346 (39%), Gaps = 45/346 (13%)
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAV-GILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 165
GF+ SV+T N+L+ Y + +D V I ++ + P+ + +I C
Sbjct: 194 GFTLSVITLNTLIH-YSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKE 252
Query: 166 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
K P +SL+ + E R+ E+ L + +L + D + Y+ ++
Sbjct: 253 VVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVY 312
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLPD-FV--------------------------TGFSP 258
A G+ A + DEM+ +GF + FV +G SP
Sbjct: 313 AKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSP 372
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELK 318
T+N LI G E+ LE M GL P+ +++ ++ +I + +A E+
Sbjct: 373 YDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEIL 432
Query: 319 IETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 378
++ DK + E TYS ++ ++ ++ +AL+L ++M
Sbjct: 433 TKSIDKGF--------------VPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPG 478
Query: 379 YVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 424
+ + LI GL + EA L I + P+ +YD L++
Sbjct: 479 FEVFRSLIVGLCTCGKV-EAGEKYLKIMKKRLIE-PNADIYDALIK 522
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 89/226 (39%), Gaps = 35/226 (15%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
+EG + A ++ + M +G + Y+ + C + A LLSEM G SP
Sbjct: 316 KEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDE 375
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
T+N L+ + R +K + M RGL P ++N ++
Sbjct: 376 TFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKS 435
Query: 174 VDKGIFPDAATYSSLMEALC----VEQ-----------RLSEAFDLFREMLRGG------ 212
+DKG PD TYS L+ ++Q ++S F++FR ++ G
Sbjct: 436 IDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKV 495
Query: 213 --------------VSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 244
+ P+ Y L+ A +G+ T A +++EMI
Sbjct: 496 EAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMI 541
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 9/218 (4%)
Query: 93 IDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNR 152
I + H +L+ M+ G P VT + V + C VD+A +++ + E+ PD +YN
Sbjct: 140 ISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNF 199
Query: 153 VISKFCXXXXXXXXXXXXXXXVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 211
++ C D + PD +++ L++ +C + L EA L ++
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNA 259
Query: 212 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 271
G PD Y ++ C + + ++A ++ +M +G PD +TYN LI GL
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD--------QITYNTLIFGLS 311
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG 309
RVEEA L+ M + G P+ +Y+++++G C+ G
Sbjct: 312 KAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 14/272 (5%)
Query: 75 LDERTYSSVIGWFCNLNKIDSAHTLLSEMI--AKGFSPSVVTYNSLVFAYCRRD--SVDK 130
LD + ++SV+ + ++ ++ L ++ F P T+ L+ CR S+
Sbjct: 83 LDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISN 142
Query: 131 AVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLME 190
+L M GL PD + + + C +K PD TY+ L++
Sbjct: 143 VHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK 202
Query: 191 ALCVEQRLSEAFDLFREMLRG-GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFL 249
LC + L ++ EM V PD +++T L++ C +A +L ++ + GF
Sbjct: 203 HLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 250 PDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG 309
PD YN ++ G C L + EA+ + + M E G+ P+ ++Y+T+I G + G
Sbjct: 263 PD--------CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAG 314
Query: 310 ELGKAYELKIETEDKAIWWLDEDTYDSLMDSL 341
+ +A + ++T A + D TY SLM+ +
Sbjct: 315 RVEEA-RMYLKTMVDAGYEPDTATYTSLMNGM 345
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 120/286 (41%), Gaps = 24/286 (8%)
Query: 2 KLLRASFTAALKMALNVNIYNGMIRGFATAAGKSDS--------ESKKVGEAFQS----- 48
K L S A ++ L++ +N +++ + + A +D+ +S+ +S
Sbjct: 69 KSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLIL 128
Query: 49 LKRLCR--EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 106
L CR + I ++L +M GL D+ T + C ++D A L+ E+ K
Sbjct: 129 LSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEK 188
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER-GLSPDVDSYNRVISKFCXXXXXXX 165
P TYN L+ C+ + + M + + PD+ S+ +I C
Sbjct: 189 HSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLRE 248
Query: 166 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
+ G PD Y+++M+ C + SEA ++++M GV PD++TY L+
Sbjct: 249 AMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIF 308
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 271
G +A M+ G+ PD TY +L++G+C
Sbjct: 309 GLSKAGRVEEARMYLKTMVDAGYEPD--------TATYTSLMNGMC 346
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 21/220 (9%)
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
V+ G+ PD T + +LC R+ EA DL +E+ PD TY LL C +
Sbjct: 151 VNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDL 210
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
+ DEM DF P +V++ LI +C + EA+ ++ + G P
Sbjct: 211 HVVYEFVDEMRD-----DF--DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 294 NAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMND 353
+ Y+T++ GFC + + +A + + +++ + D+ TY++L+ LS
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEP-DQITYNTLIFGLS----------- 311
Query: 354 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 393
G ++ A M GY Y+ L+NG+ +K
Sbjct: 312 --KAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 11/238 (4%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
TY+ ++ +C + + A + ++MI +G P +V +N ++ R A+ + M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVM 359
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
+G P+V SY +I FC VD G+ PDAA Y+ L+ +++L
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 258
++L +EM G PD TY L+ A ++++MI P
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQ--------NEIEP 471
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
+I T+N ++ E + M + G+ P+ SY+ +I G IGE GK+ E
Sbjct: 472 SIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGL--IGE-GKSRE 526
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 153/371 (41%), Gaps = 33/371 (8%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R R P + +G D RTY+S++ + ++ ++L EM KG ++
Sbjct: 172 RHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TME 230
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
T+ + A+ KAVGI M + V++ N ++
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
++ P+ TY+ L+ C + L EA ++ +M+ G+ PD + + +L +
Sbjct: 291 KER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKK 349
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
+ A L M KG P+ + +Y +I C +E A+E M + GL P
Sbjct: 350 SDAIKLFHVMKSKGPCPN--------VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQP 401
Query: 294 NAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED-------- 345
+A Y+ +I+GF +L YEL E ++K D TY++L+ ++ +
Sbjct: 402 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKG-HPPDGKTYNALIKLMANQKMPEHATRI 460
Query: 346 --------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 391
T++ +M Y N + + +M + G +Y+VLI GL
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIG 520
Query: 392 KARTREAKRDL 402
+ ++REA R L
Sbjct: 521 EGKSREACRYL 531
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 10/222 (4%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L+ L R + +A ++ VMK KG + R+Y+ +I FC + +++A +M+ G
Sbjct: 340 LEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL 399
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P Y L+ + + +D +L+ M E+G PD +YN +I
Sbjct: 400 QPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATR 459
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ I P T++ +M++ + + ++ EM++ G+ PD+ +YT L+
Sbjct: 460 IYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLI 519
Query: 229 LVGEFTKAFHLHDEMIHKG----------FLPDFVTGFSPAI 260
G+ +A +EM+ KG F DF G P I
Sbjct: 520 GEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEI 561
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 8/258 (3%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
CR + EA ++ M +GL D ++ ++ K A L M +KG P+V
Sbjct: 309 CRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNV 368
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
+Y ++ +C++ S++ A+ M + GL PD Y +I+ F
Sbjct: 369 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 428
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
+KG PD TY++L++ + ++ A ++ +M++ + P T+ ++ + +
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARN 488
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
+ + +EMI KG PD +Y LI GL + EA L M + G+
Sbjct: 489 YEMGRAVWEEMIKKGICPD--------DNSYTVLIRGLIGEGKSREACRYLEEMLDKGMK 540
Query: 293 PNAVSYSTVISGFCQIGE 310
+ Y+ + F + G+
Sbjct: 541 TPLIDYNKFAADFHRGGQ 558
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 116/304 (38%), Gaps = 48/304 (15%)
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
GF+ TYN+++ L + E + +L M GL +++ + F E KA
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKA 248
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLSYED---------------------TYSSVMND 353
+ E K + + +T + L+DSL TY+ ++N
Sbjct: 249 VGI-FELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 307
Query: 354 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM 413
+ N+ A ++ +DM G VA++V++ GL + + +A + + S G
Sbjct: 308 WCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKG--PC 365
Query: 414 PSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDG 472
P+ Y I++ + C S ++ +E D L DAA
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA--------------------- 404
Query: 473 GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINN 532
+Y LI + Y + EM GH P + ALI + + +M + + N
Sbjct: 405 -VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNK 463
Query: 533 TLRS 536
+++
Sbjct: 464 MIQN 467
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 120/266 (45%), Gaps = 9/266 (3%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
CR G I EAE++ + MK G+ + TYS VI C +I AH + ++M+ G +P+
Sbjct: 266 CRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNA 325
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
+T+N+L+ + + +K + + M + G PD +YN +I C
Sbjct: 326 ITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNT 385
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
+ K +A+T++++ + ++ ++ A ++ +M+ P+ +TY L+
Sbjct: 386 MIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKS 445
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM-PEMGL 291
+ EM K P+ + TY L+ C + A ++ + M E L
Sbjct: 446 TDMVLKMKKEMDDKEVEPN--------VNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCL 497
Query: 292 SPNAVSYSTVISGFCQIGELGKAYEL 317
+P+ Y V++ + G+L K EL
Sbjct: 498 TPSLSLYEMVLAQLRRAGQLKKHEEL 523
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 117/296 (39%), Gaps = 28/296 (9%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
++R R G EA M+ G D+ +S VI + A + + + F
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-F 251
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P V+ Y +LV +CR + +A + + M G+ P+V +Y+ VI C
Sbjct: 252 EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHD 311
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+D G P+A T+++LM R + ++ +M + G PD +TY L+ A C
Sbjct: 312 VFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC 371
Query: 229 LVGEFTKAFHLHDEMIHKGF---LPDFVTGF------------------------SPAIV 261
A + + MI K F T F P V
Sbjct: 372 RDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTV 431
Query: 262 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
TYN L+ + L++ + M + + PN +Y +++ FC +G AY+L
Sbjct: 432 TYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKL 487
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 109/238 (45%), Gaps = 9/238 (3%)
Query: 80 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 139
Y+ +I + + D A L+ M ++ S+ T+ L+ Y R +AV M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 140 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 199
+ G PD +++ VIS D+ PD Y++L+ C +S
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 259
EA +F+EM G+ P+ TY+ +++A C G+ ++A + +M+ +G +P
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLD--------SGCAPN 324
Query: 260 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
+T+N L+ R E+ L++ M ++G P+ ++Y+ +I C+ L A ++
Sbjct: 325 AITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKV 382
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 127/336 (37%), Gaps = 81/336 (24%)
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 258
SEA F M G PD++ ++ +++ ++A + F F P
Sbjct: 203 SEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEA---------QSFFDSLKDRFEP 253
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELK 318
++ Y L+ G C + EA ++ + M G+ PN +YS VI C+ G++ +A+
Sbjct: 254 DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAH--- 310
Query: 319 IETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 376
D + ++DS + T++++M ++ G ++ LQ+ + M + G
Sbjct: 311 -------------DVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCE 357
Query: 377 SSYVAYSVLI----------------NGLHKKA------------RTREAKRDL-----L 403
+ Y+ LI N + KK R E KRD+ +
Sbjct: 358 PDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRM 417
Query: 404 YIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 463
Y P+ Y+IL+ S+ +V +K K
Sbjct: 418 YSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMK---------------------KEM 456
Query: 464 TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMV 499
D E + + Y LL+ C + + AY ++ EMV
Sbjct: 457 DDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMV 492
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 8/224 (3%)
Query: 65 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 124
+E+ K G+ D TY+ +I FC S++++++EM KG P+ ++ ++ +
Sbjct: 175 IEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYA 234
Query: 125 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 184
D D+ +L M +RG++ V +YN I C + G+ P+ T
Sbjct: 235 EDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVT 294
Query: 185 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 244
YS L+ C E EA LF+ M+ G PD Y L+ C G+F A L E +
Sbjct: 295 YSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESM 354
Query: 245 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
K ++P F +L++GL +VEEA E++ + E
Sbjct: 355 EKNWVPSF--------SIMKSLVNGLAKDSKVEEAKELIGQVKE 390
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
GI PD TY+ +++ C S ++ + EM R G+ P+ ++ G
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSF----------GLMISG 231
Query: 237 FHLHDEMIHKGFLPDFVT--GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
F+ D+ G + + G + + TYN I LC + +EA +L GM G+ PN
Sbjct: 232 FYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPN 291
Query: 295 AVSYSTVISGFCQ---IGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
V+YS +I GFC E K +++ + K D + Y +L+ Y
Sbjct: 292 TVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKP----DSECYFTLI----Y-------- 335
Query: 352 NDYLAE-GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 399
YL + G+ + AL L + ++ S+ L+NGL K ++ EAK
Sbjct: 336 --YLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAK 382
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%)
Query: 55 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 114
E + E ++L +MK +G+ + TY+ I C K A LL M++ G P+ VT
Sbjct: 235 EDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVT 294
Query: 115 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 174
Y+ L+ +C D ++A + + M RG PD + Y +I C +
Sbjct: 295 YSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESM 354
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLF 205
+K P + SL+ L + ++ EA +L
Sbjct: 355 EKNWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 147/383 (38%), Gaps = 82/383 (21%)
Query: 28 FATAAGKSDSESKKV------GEAF--------QSLKRLCREGRIPEAEQMLEVMKCKGL 73
F + G+ D K+ GE F Q L+ CR G + EA Q++ +M C G+
Sbjct: 184 FCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGI 243
Query: 74 FLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVG 133
+ +S ++ F + A L ++MI G SP++VTY SL+ + VD+A
Sbjct: 244 SVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFT 303
Query: 134 ILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 193
+L + GL+PD+ N +I + + + PD T++S++ +LC
Sbjct: 304 VLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC 363
Query: 194 VEQRLSEAFDLFREMLRG------------------------------------GVSPDE 217
LS FDL + G + D
Sbjct: 364 ----LSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDC 419
Query: 218 LTYTRLLNACCLVGEFTKAF---------------HLH----DEMIHKGFLPDFVTGFSP 258
TYT L+A C G A H H D +I G V F
Sbjct: 420 YTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKR 479
Query: 259 AI--------VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGE 310
I V+Y I GL R+EEA + M E G+ PN +Y T+ISG C+ E
Sbjct: 480 CILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKE 539
Query: 311 LGKAYELKIETEDKAIWWLDEDT 333
K ++ E + + LD +T
Sbjct: 540 TEKVRKILRECIQEGV-ELDPNT 561
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 16/264 (6%)
Query: 49 LKRLCREGRIPEAEQMLEVM---KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIA 105
LK + EAE++ E + K L D++ Y +I + + A + S M+
Sbjct: 216 LKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVG 275
Query: 106 KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 165
KG S VTYNSL+ V K I M + PDV SY +I +
Sbjct: 276 KGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEE 332
Query: 166 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
+D G+ P Y+ L++A + + +A +F+ M R + PD +YT +L+
Sbjct: 333 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 392
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 285
A + A K F V GF P IVTY LI G + VE+ +E+
Sbjct: 393 AYVNASDMEGA--------EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEK 444
Query: 286 MPEMGLSPNAVSYSTVI--SGFCQ 307
M G+ N +T++ SG C+
Sbjct: 445 MRLSGIKANQTILTTIMDASGRCK 468
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 127/312 (40%), Gaps = 35/312 (11%)
Query: 85 GWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLS 144
G N N + ++LS+M G +P+V++Y +L+ +Y R + A I R M G
Sbjct: 150 GKLGNFNGAERVLSVLSKM---GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPE 206
Query: 145 PDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG---IFPDAATYSSLMEALCVEQRLSEA 201
P +Y ++ F +D+ + PD Y ++ +A
Sbjct: 207 PSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKA 266
Query: 202 FDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIV 261
+F M+ GV +TY L++ E +K ++D+M PD +V
Sbjct: 267 RKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPD--------VV 315
Query: 262 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIET 321
+Y LI R EEAL + M + G+ P +Y+ ++ F G + +A
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA------- 368
Query: 322 EDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 379
+ + S+ + D +Y+++++ Y+ +M+ A + + DG+ +
Sbjct: 369 ---------KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 419
Query: 380 VAYSVLINGLHK 391
V Y LI G K
Sbjct: 420 VTYGTLIKGYAK 431
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 155/350 (44%), Gaps = 64/350 (18%)
Query: 80 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 139
++SV+ +C K + A L+ EM +G SP +VT+N L+ Y + D A+ +++ M
Sbjct: 250 WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKME 309
Query: 140 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 199
G++ DV ++ +IS G+ + Y
Sbjct: 310 TFGITADVFTWTAMIS---------------------GLIHNGMRY-------------- 334
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 259
+A D+FR+M GV P+ +T ++AC + + +H + GF+ D + G
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVG---- 390
Query: 260 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKI 319
N+L+ ++E+A ++ + + + +++++I+G+CQ G GKAYEL
Sbjct: 391 ----NSLVDMYSKCGKLEDARKVFDSVK----NKDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 320 ETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 379
+D +L ++ T++++++ Y+ G+ A+ L M +DG +
Sbjct: 443 RMQDA-----------NLRPNII---TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRN 488
Query: 380 VA-YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSN 428
A ++++I G + + EA + F MP+ LL C+N
Sbjct: 489 TATWNLIIAGYIQNGKKDEALELFRKMQFSRF--MPNSVTILSLLPACAN 536
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 106/492 (21%), Positives = 192/492 (39%), Gaps = 112/492 (22%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS-- 109
LCR G + EAE+ L+ + +G + TY ++ + IDS L ++ F
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLE-----SCIDSGSIHLGRILHARFGLF 110
Query: 110 --PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
P V L+ Y + + A + +M ER L
Sbjct: 111 TEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL------------------------ 146
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
T+S+++ A E R E LFR M++ GV PD+ + ++L C
Sbjct: 147 ---------------FTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGC 191
Query: 228 CLVGEFTKAFHLHDEMIHKGFLP------------------DFVTGF-----SPAIVTYN 264
G+ +H +I G DF T F ++ +N
Sbjct: 192 ANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWN 251
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
+++ C + EEA+E+++ M + G+SP V+++ +I G+ Q+G+ A +L + E
Sbjct: 252 SVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETF 311
Query: 325 AIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 384
I T D T++++++ + G +AL DM R +L+ V +V
Sbjct: 312 GI------TADVF--------TWTAMISGLIHNGMRYQAL----DMFRKMFLAGVVPNAV 353
Query: 385 LINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMR 444
I + + S +++ + D+L+ N SLV++ YS
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHS---IAVKMGFIDDVLVGN-------SLVDM---YSKC 400
Query: 445 DLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHA 504
+DA + +KNK D +N +I +C++ KAY ++ M
Sbjct: 401 GKLEDARKVFDS---VKNK-------DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLR 450
Query: 505 PHMFSVLALISA 516
P++ + +IS
Sbjct: 451 PNIITWNTMISG 462
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/399 (19%), Positives = 157/399 (39%), Gaps = 30/399 (7%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
RE R E ++ +M G+ D+ + ++ N +++ + S +I G S +
Sbjct: 158 RENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLR 217
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
NS++ Y + +D A R M ER DV ++N V+ +C
Sbjct: 218 VSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEM 273
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
+GI P T++ L+ + A DL ++M G++ D T+T +++ G
Sbjct: 274 EKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMR 333
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
+A + +M F+ G P VT + + L + + E+ +MG
Sbjct: 334 YQALDMFRKM--------FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFID 385
Query: 294 NAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMND 353
+ + ++++ + + G+L A ++ +DS+ + Y T++S++
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKV----------------FDSVKNKDVY--TWNSMITG 427
Query: 354 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM 413
Y G +A +L M + + ++ +I+G K EA + DG +
Sbjct: 428 YCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQR 487
Query: 414 PSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAAT 452
+ T I+ N + +EL + ++ T
Sbjct: 488 NTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT 526
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 116/266 (43%), Gaps = 13/266 (4%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C+ G+ EA ++++ M+ +G+ T++ +IG + L K D+A L+ +M G + V
Sbjct: 258 CQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADV 317
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
T+ +++ +A+ + R M G+ P+ + +S
Sbjct: 318 FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSI 377
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
V G D +SL++ +L +A +F + + D T+ ++ C G
Sbjct: 378 AVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV----KNKDVYTWNSMITGYCQAGY 433
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG-L 291
KA+ L M P+ I+T+N +I G EA+++ + M + G +
Sbjct: 434 CGKAYELFTRMQDANLRPN--------IITWNTMISGYIKNGDEGEAMDLFQRMEKDGKV 485
Query: 292 SPNAVSYSTVISGFCQIGELGKAYEL 317
N +++ +I+G+ Q G+ +A EL
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALEL 511
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 101/255 (39%), Gaps = 28/255 (10%)
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
G D +S++ + K++ A + + K V T+NS++ YC+ KA
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKA 437
Query: 132 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG-IFPDAATYSSLME 190
+ M + L P++ ++N +IS + G + + AT++ ++
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 497
Query: 191 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC--------------CLVGEFTKA 236
+ EA +LFR+M P+ +T LL AC C++ A
Sbjct: 498 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA 557
Query: 237 FH-----LHDEMIHKGFLPDFVTGF----SPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
H L D G + T F + I+T+N+LI G AL + M
Sbjct: 558 IHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMK 617
Query: 288 EMGLSPNAVSYSTVI 302
G++PN + S++I
Sbjct: 618 TQGITPNRGTLSSII 632
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 145/376 (38%), Gaps = 53/376 (14%)
Query: 60 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 119
+A M M G+ + T S + L I+ + S + GF V+ NSLV
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 120 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 179
Y + ++ A + ++ + DV ++N +I+ +C D +
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLR 450
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLR-GGVSPDELTYTRLLNACCLVGEFTKAFH 238
P+ T+++++ EA DLF+ M + G V + T+ ++ G+ +A
Sbjct: 451 PNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALE 510
Query: 239 LHDEMIHKGFLPDFVTGFSPAIVTYNAL-------IHGLCFLDRVEEALEILRGMPEMGL 291
L +M F+P+ VT S N L IHG C L R +A+ ++
Sbjct: 511 LFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHG-CVLRRNLDAIHAVK------- 562
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
NA++ + SG E + L +ET+D W +S++
Sbjct: 563 --NALTDTYAKSGDI---EYSRTIFLGMETKDIITW--------------------NSLI 597
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
Y+ G+ AL L + M G + S +I E K+ IA+D +
Sbjct: 598 GGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIAND-YH 656
Query: 412 SMPSYTVYDILLENCS 427
+P+ LE+CS
Sbjct: 657 IIPA-------LEHCS 665
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 167/390 (42%), Gaps = 34/390 (8%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC++GR+ ++ MK K + +D Y +I F K+ SA L +++ G+
Sbjct: 343 LCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIAD 402
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+ YN+++ C + VDKA + + E L PD ++ + ++ +
Sbjct: 403 IGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLE 462
Query: 172 XXVDKGIFPDAATYSSLMEALCV-EQRLSEAFDLF---REMLRGGVSPDELTYTRLLNAC 227
+ G +P + + + LC E++ + A D+F + G VS Y L+ A
Sbjct: 463 RIGELG-YPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVS----VYNILMEAL 517
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDR--VEEALEILRG 285
+G+ K+ L EM GF PD + +S AI CF+++ V+ A
Sbjct: 518 YKMGDIQKSLSLFYEMRKLGFEPD-SSSYSIAIC---------CFVEKGDVKAACSFHEK 567
Query: 286 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 345
+ EM P+ +Y ++ G CQIGE+ A+ L + ++ +S E
Sbjct: 568 IIEMSCVPSIAAYLSLTKGLCQIGEI------------DAVMLLVRECLGNV-ESGPMEF 614
Query: 346 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 405
Y+ + N ++ +++ +M+++G + V Y +I+G+ K + A+ +
Sbjct: 615 KYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTEL 674
Query: 406 ASDGFLSMPSYTVYDILLENCSNSEFKSLV 435
++ VY+ +L + + LV
Sbjct: 675 KKRKVMTEADMVVYEEMLIEQTKKKTADLV 704
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 157/395 (39%), Gaps = 49/395 (12%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L R G A+Q+ E+M +G E+ + +I + + + + +M GF P
Sbjct: 168 LNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPR 227
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V YN ++ A + D A+ + E GL + ++ ++ C
Sbjct: 228 VFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQ 287
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ PD Y+++++ L E L + ++ EM R + PD + Y L+ C G
Sbjct: 288 RMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDG 347
Query: 232 EFTKAFHLHDEMIHKGFLPD----------FV-----------------TGFSPAIVTYN 264
+ + L EM K L D FV +G+ I YN
Sbjct: 348 RVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYN 407
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFC-------------QIGEL 311
A+I GLC +++V++A ++ + E L P+ + S ++ + +IGEL
Sbjct: 408 AVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGEL 467
Query: 312 G--------KAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 363
G + ++L E+K LD Y Y+ +M G++Q++
Sbjct: 468 GYPVSDYLTQFFKLLCADEEKNAMALDV-FYILKTKGHGSVSVYNILMEALYKMGDIQKS 526
Query: 364 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
L L ++M + G+ +YS+ I +K + A
Sbjct: 527 LSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAA 561
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 16/264 (6%)
Query: 49 LKRLCREGRIPEAEQMLEVM---KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIA 105
LK + EAE++ E + K L D++ Y +I + + A + S M+
Sbjct: 223 LKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVG 282
Query: 106 KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 165
KG S VTYNSL+ V K I M + PDV SY +I +
Sbjct: 283 KGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEE 339
Query: 166 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
+D G+ P Y+ L++A + + +A +F+ M R + PD +YT +L+
Sbjct: 340 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 399
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 285
A + A K F V GF P IVTY LI G + VE+ +E+
Sbjct: 400 AYVNASDMEGA--------EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEK 451
Query: 286 MPEMGLSPNAVSYSTVI--SGFCQ 307
M G+ N +T++ SG C+
Sbjct: 452 MRLSGIKANQTILTTIMDASGRCK 475
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 127/314 (40%), Gaps = 32/314 (10%)
Query: 83 VIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERG 142
+I + L + A +LS + G +P+V++Y +L+ +Y R + A I R M G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 143 LSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG---IFPDAATYSSLMEALCVEQRLS 199
P +Y ++ F +D+ + PD Y ++
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 259
+A +F M+ GV +TY L++ E +K ++D+M PD
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPD-------- 320
Query: 260 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKI 319
+V+Y LI R EEAL + M + G+ P +Y+ ++ F G + +A
Sbjct: 321 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA----- 375
Query: 320 ETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLS 377
+ + S+ + D +Y+++++ Y+ +M+ A + + DG+
Sbjct: 376 -----------KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEP 424
Query: 378 SYVAYSVLINGLHK 391
+ V Y LI G K
Sbjct: 425 NIVTYGTLIKGYAK 438
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 152/333 (45%), Gaps = 37/333 (11%)
Query: 67 VMKCKGLFL---------DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNS 117
V + +GLF D TY ++I + A L+ +M+ +PS TYN+
Sbjct: 27 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 86
Query: 118 LVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG 177
L+ A + +A+ + + M + G+ PD+ ++N V+S +
Sbjct: 87 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 146
Query: 178 IFPDAATYSSLMEALCVEQRLSEAFDLFREML--RGGVSPDELTYTRLLNACCLVGEFTK 235
+ PD T++ ++ L + S+A DLF M R PD +T+T +++ + GE
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 206
Query: 236 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
+ + M+ +G P+ IV+YNAL+ AL +L + + G+ P+
Sbjct: 207 CRAVFEAMVAEGLKPN--------IVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDV 258
Query: 296 VSYSTVISGFCQIGELGKAYE--LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMND 353
VSY+ +++ + + + GKA E L + E + + TY++L+D+ Y S N
Sbjct: 259 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP---NVVTYNALIDA------YGS--NG 307
Query: 354 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 386
+LAE A+++ M +DG + V+ L+
Sbjct: 308 FLAE-----AVEIFRQMEQDGIKPNVVSVCTLL 335
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 150/335 (44%), Gaps = 22/335 (6%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
D T++S++ + +I++ + M+A+G P++V+YN+L+ AY A+ +L
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 195
+ + G+ PDV SY +++ + + P+ TY++L++A
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 306
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
L+EA ++FR+M + G+ P+ ++ LL AC + + + G
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR--------G 358
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
+ YN+ I +E+A+ + + M + + ++V+++ +ISG C++ + +A
Sbjct: 359 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 418
Query: 316 ELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 375
E ED +I E YSSV+ Y +G + A + + M G
Sbjct: 419 SYLKEMEDLSIPLTKE--------------VYSSVLCAYSKQGQVTEAESIFNQMKMAGC 464
Query: 376 LSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 410
+AY+ +++ + + +A L + ++G
Sbjct: 465 EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 499
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/500 (21%), Positives = 197/500 (39%), Gaps = 78/500 (15%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R G+ A +++ M + TY+++I + A + +M G P +V
Sbjct: 58 RAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLV 117
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
T+N ++ AY KA+ M + PD ++N +I
Sbjct: 118 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 177
Query: 174 VDKG--IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+K PD T++S+M V+ + +F M+ G+ P+ ++Y L+ A + G
Sbjct: 178 REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 237
Query: 232 EFTKAFHLHDEMIHKGFLPDFVT--------GFS-------------------PAIVTYN 264
A + ++ G +PD V+ G S P +VTYN
Sbjct: 238 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 297
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
ALI + EA+EI R M + G+ PN VS T+++ C ++ K
Sbjct: 298 ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA-CS------------RSKKK 344
Query: 325 AIWWLDEDTYDSLMDSLSYE---DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 381
++ DT S S Y+S + Y+ +++A+ L M + + V
Sbjct: 345 ----VNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 400
Query: 382 YSVLINGLHKKARTREAKRDLLYIASDGFLSMP-SYTVYDILLENCSNSEFKSLVELVKD 440
+++LI+G + ++ EA + Y+ LS+P + VY +L C+ S+ + E
Sbjct: 401 FTILISGSCRMSKYPEA---ISYLKEMEDLSIPLTKEVYSSVL--CAYSKQGQVTEAESI 455
Query: 441 YSMRDLS--DDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 498
++ ++ + A+T+MLH N S KA +++EM
Sbjct: 456 FNQMKMAGCEPDVIAYTSMLHAYNA---------------------SEKWGKACELFLEM 494
Query: 499 VHYGHAPHMFSVLALISALD 518
G P + AL+ A +
Sbjct: 495 EANGIEPDSIACSALMRAFN 514
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 167/433 (38%), Gaps = 36/433 (8%)
Query: 80 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 139
Y+ +I N +D A L EM P TY++L+ A+ R A+ ++ M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 140 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 199
++P +YN +I+ D G+ PD T++ ++ A ++ S
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 259
+A F M V PD T+ ++ +G+ ++A L + M K P
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR------AECRPD 187
Query: 260 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKI 319
+VT+ +++H +E + M GL PN VSY+ ++ + G G A +
Sbjct: 188 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 247
Query: 320 ETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 379
+ + I + D +S Y+ ++N Y +A ++ M ++ +
Sbjct: 248 DIKQNGI----------IPDVVS----YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV 293
Query: 380 VAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVK 439
V Y+ LI+ EA + DG P+ LL CS S+ K V+ V
Sbjct: 294 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGI--KPNVVSVCTLLAACSRSKKKVNVDTVL 351
Query: 440 DYSM-RDLSDDAATAHTTMLHLKNKTDGEN-------------KTDGGMYNLLIFEHCRS 485
+ R ++ + A ++ + N + E K D + +LI CR
Sbjct: 352 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 411
Query: 486 HNVHKAYNMYMEM 498
+A + EM
Sbjct: 412 SKYPEAISYLKEM 424
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 155/350 (44%), Gaps = 32/350 (9%)
Query: 104 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 163
I K + YN ++ + R + VD+A G+ M + PD ++Y+ +I+
Sbjct: 3 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 62
Query: 164 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 223
+ I P +TY++L+ A EA ++ ++M GV PD +T+ +
Sbjct: 63 RWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIV 122
Query: 224 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 283
L+A +++KA + M PD T+N +I+ L L + +AL++
Sbjct: 123 LSAYKSGRQYSKALSYFELMKGAKVRPD--------TTTFNIIIYCLSKLGQSSQALDLF 174
Query: 284 RGMPE--MGLSPNAVSYSTVISGFCQIGELGKAYELKIETED-KAIWWLDEDTYDSLMDS 340
M E P+ V++++++ Y +K E E+ +A++ + + L +
Sbjct: 175 NSMREKRAECRPDVVTFTSIM----------HLYSVKGEIENCRAVF--EAMVAEGLKPN 222
Query: 341 LSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKR 400
+ +Y+++M Y G AL + D+ ++G + V+Y+ L+N + + +AK
Sbjct: 223 IV---SYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 279
Query: 401 DLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDA 450
L + + P+ Y+ L++ ++ F L E V+ + R + D
Sbjct: 280 VFLMMRKE--RRKPNVVTYNALIDAYGSNGF--LAEAVEIF--RQMEQDG 323
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 136/339 (40%), Gaps = 26/339 (7%)
Query: 55 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 114
+G I + E M +GL + +Y++++G + +A ++L ++ G P VV+
Sbjct: 201 KGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS 260
Query: 115 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 174
Y L+ +Y R KA + M + P+V +YN +I +
Sbjct: 261 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 320
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 234
GI P+ + +L+ A ++ + G++ + Y + + E
Sbjct: 321 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 380
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
KA L+ M K D VT+ LI G C + + EA+ L+ M ++ +
Sbjct: 381 KAIALYQSMRKKKVKADS--------VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLT 432
Query: 295 AVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDT--YSSVMN 352
YS+V+ + + G++ +A E ++ + + D Y+S+++
Sbjct: 433 KEVYSSVLCAYSKQGQVTEA----------------ESIFNQMKMAGCEPDVIAYTSMLH 476
Query: 353 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 391
Y A +A +L +M +G +A S L+ +K
Sbjct: 477 AYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 515
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 122/319 (38%), Gaps = 41/319 (12%)
Query: 8 FTAALKMALNVNI--YNGMIRGFATAAGKSDSESKKVGEAFQSLKRL------------- 52
+AA +N+N YN I + AA E +K +QS+++
Sbjct: 351 LSAAQSRGINLNTAAYNSAIGSYINAA-----ELEKAIALYQSMRKKKVKADSVTFTILI 405
Query: 53 ---CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS 109
CR + PEA L+ M+ + L + YSSV+ + ++ A ++ ++M G
Sbjct: 406 SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE 465
Query: 110 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 169
P V+ Y S++ AY + KA + M G+ PD + + ++ F
Sbjct: 466 PDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVL 525
Query: 170 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 229
+K I A + + A Q A DL + M P Y L+
Sbjct: 526 MDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM-----DP----YLPSLS---- 572
Query: 230 VGEFTKAFHLHD-----EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 284
+G + HL E + K F +G + TY L+ L + + +E+L
Sbjct: 573 IGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLE 632
Query: 285 GMPEMGLSPNAVSYSTVIS 303
M G+ P+ Y +IS
Sbjct: 633 WMSGAGIQPSNQMYRDIIS 651
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 10/267 (3%)
Query: 57 RIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYN 116
R+ EA+++ EV+ +D ++IG ++ DSA L M++ G P++ T +
Sbjct: 308 RLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDP-DSAVEFLVYMVSTGKLPAIRTLS 366
Query: 117 SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 176
L CR D D + ++ +G ++ SY+ +IS C +
Sbjct: 367 KLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKE 426
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
G+ PD + Y++L+EA C + + A L+ EM G + TY L+ GE ++
Sbjct: 427 GLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEES 486
Query: 237 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG-MPEMGLSPNA 295
L D+M+ +G PD Y +LI GLC ++E A+E+ R M +
Sbjct: 487 LRLFDKMLERGIEPDE--------TIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTR 538
Query: 296 VSYSTVISGFCQIGELGKAYELKIETE 322
S + C G G+A +L E E
Sbjct: 539 RVLSEFVLNLCSNGHSGEASQLLRERE 565
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 50 KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS 109
K LCR + + E++ KG F + ++YS +I + C ++ ++T L EM +G +
Sbjct: 370 KNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLA 429
Query: 110 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 169
P V YN+L+ A C+ + + A + M G ++ +YN +I K
Sbjct: 430 PDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRL 489
Query: 170 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR------L 223
+++GI PD Y SL+E LC E ++ A ++FR+ + D T TR +
Sbjct: 490 FDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMER----DHKTVTRRVLSEFV 545
Query: 224 LNACC--LVGEFTKAFHLHDEMIHKG 247
LN C GE ++ + + H G
Sbjct: 546 LNLCSNGHSGEASQLLREREHLEHTG 571
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 155/407 (38%), Gaps = 41/407 (10%)
Query: 61 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 120
A+++ M+ KG+ L+ + IGWFC ++ + L+ E+ + + L+
Sbjct: 171 AQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLIL 230
Query: 121 -AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 179
+ C+ A IL + PD +Y + F G+
Sbjct: 231 HSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVA 290
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRG-----------------GVSPDE----- 217
P ++ Y + + L +RL+EA ++ ++ G V PD
Sbjct: 291 PRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFL 350
Query: 218 --LTYTRLLNACCLVGEFTKAFHLHDEMIH--KGFLPDFVTGFSPAIVTYNALIHGLCFL 273
+ T L A + + +K HD+ H K + G+ + +Y+ +I LC
Sbjct: 351 VYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKA 410
Query: 274 DRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDT 333
RV E+ L+ M + GL+P+ Y+ +I C+ + A K +W DE
Sbjct: 411 GRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPA---------KKLW--DEMF 459
Query: 334 YDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 393
+ +L+ TY+ ++ EG + +L+L M G Y LI GL K+
Sbjct: 460 VEGCKMNLT---TYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKET 516
Query: 394 RTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKD 440
+ A ++ + + +L CSN +L+++
Sbjct: 517 KIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 153/371 (41%), Gaps = 33/371 (8%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R R P + +G D RTY+S++ + ++ ++L EM KG ++
Sbjct: 171 RHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TME 229
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
T+ + A+ KAVGI M + V++ N ++
Sbjct: 230 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 289
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
++ P+ TY+ L+ C + L EA ++ +M+ G+ PD + + +L +
Sbjct: 290 KER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 348
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
+ A L M KG P+ + +Y +I C +E A+E M + GL P
Sbjct: 349 SDAIKLFHVMKSKGPCPN--------VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQP 400
Query: 294 NAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED-------- 345
+A Y+ +I+GF +L YEL E ++K D TY++L+ ++ +
Sbjct: 401 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKG-HPPDGKTYNALIKLMANQKMPEHGTRI 459
Query: 346 --------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 391
T++ +M Y N + + +M + G +Y+VLI GL
Sbjct: 460 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 519
Query: 392 KARTREAKRDL 402
+ ++REA R L
Sbjct: 520 EGKSREACRYL 530
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 8/248 (3%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
TY+ ++ +C + + A + ++MI G P +V +N ++ R A+ + M
Sbjct: 299 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 358
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
+G P+V SY +I FC VD G+ PDAA Y+ L+ +++L
Sbjct: 359 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 418
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 258
++L +EM G PD TY L+ ++++MI P
Sbjct: 419 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ--------NEIEP 470
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELK 318
+I T+N ++ E + M + G+ P+ SY+ +I G G+ +A
Sbjct: 471 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 530
Query: 319 IETEDKAI 326
E DK +
Sbjct: 531 EEMLDKGM 538
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 10/222 (4%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L+ L R + +A ++ VMK KG + R+Y+ +I FC + +++A +M+ G
Sbjct: 339 LEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL 398
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P Y L+ + + +D +L+ M E+G PD +YN +I
Sbjct: 399 QPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTR 458
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ I P T++ +M++ V + ++ EM++ G+ PD+ +YT L+
Sbjct: 459 IYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI 518
Query: 229 LVGEFTKAFHLHDEMIHKG----------FLPDFVTGFSPAI 260
G+ +A +EM+ KG F DF G P I
Sbjct: 519 SEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEI 560
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
CR + EA ++ M GL D ++ ++ K A L M +KG P+V
Sbjct: 308 CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNV 367
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
+Y ++ +C++ S++ A+ M + GL PD Y +I+ F
Sbjct: 368 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 427
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
+KG PD TY++L++ + ++ ++ +M++ + P T+ ++ + +
Sbjct: 428 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 487
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
+ + DEMI KG PD +Y LI GL + EA L M + G+
Sbjct: 488 YEMGRAVWDEMIKKGICPD--------DNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 539
Query: 293 PNAVSYSTVISGFCQIGE 310
+ Y+ + F + G+
Sbjct: 540 TPLIDYNKFAADFHRGGQ 557
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 144/355 (40%), Gaps = 38/355 (10%)
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
T + +M EA +F + G+ + + LL+ C +A
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA------- 209
Query: 244 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVIS 303
+ L + +P T+N IHG C +RVEEAL ++ M G P +SY+T+I
Sbjct: 210 --RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIR 267
Query: 304 GFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 363
+CQ E K YE+ E E S +S+ TY+++M+ A+ + A
Sbjct: 268 CYCQQFEFIKVYEMLSEMEANG----------SPPNSI----TYTTIMSSLNAQKEFEEA 313
Query: 364 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 423
L++ M R G + Y+ LI+ L + R EA+R + +S+ + T ++
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Query: 424 ENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH--------------LKNKTDGENK 469
C + E +EL+K+ +L + + +L LK +
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL 433
Query: 470 T-DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMY 523
+ D Y LI CR++ AY ++ EM+ P + L L+ + M+
Sbjct: 434 SLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMH 488
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 130/295 (44%), Gaps = 46/295 (15%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L LC+E R+ +A +L +K + + T++ I +C N+++ A + EM GF
Sbjct: 197 LDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGF 255
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P V++Y +++ YC++ K +L M G SP
Sbjct: 256 RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG-SP----------------------- 291
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
P++ TY+++M +L ++ EA + M R G PD L Y C
Sbjct: 292 -----------PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN------C 334
Query: 229 LVGEFTKAFHLHD-EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
L+ +A L + E + + +P+ G S TYN++I C D ++A+E+L+ M
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPEL--GVSINTSTYNSMIAMYCHHDEEDKAIELLKEME 392
Query: 288 EMGL-SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL 341
L +P+ +Y ++ + G++ + +L E K LDE TY L+ L
Sbjct: 393 SSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRL 447
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 9/243 (3%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C+ R+ EA ++ MK G +Y+++I +C + + +LSEM A G P+
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
+TY +++ + + ++A+ + M G PD YN +I
Sbjct: 295 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 354
Query: 173 XVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV-SPDELTYTRLLNACCLV 230
+ + G+ + +TY+S++ C +A +L +EM + +PD TY LL +C
Sbjct: 355 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
G+ + L EM+ K L S TY LI LC + E A + M
Sbjct: 415 GDVVEVGKLLKEMVTKHHL-------SLDESTYTFLIQRLCRANMCEWAYCLFEEMISQD 467
Query: 291 LSP 293
++P
Sbjct: 468 ITP 470
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 13/188 (6%)
Query: 60 EAEQMLEV---MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLS-EMIAKGFSPSVVTY 115
E E+ L V MK G D Y+ +I +++ A + EM G S + TY
Sbjct: 309 EFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTY 368
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGL-SPDVDSYNRVI-SKFCXXXXXXXXXXXXXXX 173
NS++ YC D DKA+ +L+ M L +PDV +Y ++ S F
Sbjct: 369 NSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMV 428
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
+ D +TY+ L++ LC A+ LF EM+ ++P T C L+ E
Sbjct: 429 TKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT-------CLLLLEE 481
Query: 234 TKAFHLHD 241
K ++H+
Sbjct: 482 VKKKNMHE 489
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 144/355 (40%), Gaps = 38/355 (10%)
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
T + +M EA +F + G+ + + LL+ C +A
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA------- 209
Query: 244 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVIS 303
+ L + +P T+N IHG C +RVEEAL ++ M G P +SY+T+I
Sbjct: 210 --RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIR 267
Query: 304 GFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 363
+CQ E K YE+ E E S +S+ TY+++M+ A+ + A
Sbjct: 268 CYCQQFEFIKVYEMLSEMEANG----------SPPNSI----TYTTIMSSLNAQKEFEEA 313
Query: 364 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 423
L++ M R G + Y+ LI+ L + R EA+R + +S+ + T ++
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Query: 424 ENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH--------------LKNKTDGENK 469
C + E +EL+K+ +L + + +L LK +
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL 433
Query: 470 T-DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMY 523
+ D Y LI CR++ AY ++ EM+ P + L L+ + M+
Sbjct: 434 SLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMH 488
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 130/295 (44%), Gaps = 46/295 (15%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L LC+E R+ +A +L +K + + T++ I +C N+++ A + EM GF
Sbjct: 197 LDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGF 255
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P V++Y +++ YC++ K +L M G SP
Sbjct: 256 RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG-SP----------------------- 291
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
P++ TY+++M +L ++ EA + M R G PD L Y C
Sbjct: 292 -----------PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN------C 334
Query: 229 LVGEFTKAFHLHD-EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
L+ +A L + E + + +P+ G S TYN++I C D ++A+E+L+ M
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPEL--GVSINTSTYNSMIAMYCHHDEEDKAIELLKEME 392
Query: 288 EMGL-SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL 341
L +P+ +Y ++ + G++ + +L E K LDE TY L+ L
Sbjct: 393 SSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRL 447
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 9/243 (3%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C+ R+ EA ++ MK G +Y+++I +C + + +LSEM A G P+
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
+TY +++ + + ++A+ + M G PD YN +I
Sbjct: 295 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 354
Query: 173 XVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV-SPDELTYTRLLNACCLV 230
+ + G+ + +TY+S++ C +A +L +EM + +PD TY LL +C
Sbjct: 355 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
G+ + L EM+ K L S TY LI LC + E A + M
Sbjct: 415 GDVVEVGKLLKEMVTKHHL-------SLDESTYTFLIQRLCRANMCEWAYCLFEEMISQD 467
Query: 291 LSP 293
++P
Sbjct: 468 ITP 470
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 13/188 (6%)
Query: 60 EAEQMLEV---MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLS-EMIAKGFSPSVVTY 115
E E+ L V MK G D Y+ +I +++ A + EM G S + TY
Sbjct: 309 EFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTY 368
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGL-SPDVDSYNRVI-SKFCXXXXXXXXXXXXXXX 173
NS++ YC D DKA+ +L+ M L +PDV +Y ++ S F
Sbjct: 369 NSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMV 428
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
+ D +TY+ L++ LC A+ LF EM+ ++P T C L+ E
Sbjct: 429 TKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT-------CLLLLEE 481
Query: 234 TKAFHLHD 241
K ++H+
Sbjct: 482 VKKKNMHE 489
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 159/393 (40%), Gaps = 66/393 (16%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+ +LC R+ +A +++ M+ +G D T++++IG +C + +++ AH + EM G
Sbjct: 169 MNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGI 228
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILR------------AMAERGLSPDVDS------- 149
P+ +T + L+ + + V+ +++ +M + VDS
Sbjct: 229 RPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYF 288
Query: 150 ---------------------YNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 188
Y +I C KG+ P +Y+++
Sbjct: 289 NDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAI 348
Query: 189 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 248
+ LC + A+ L E P E TY L+ + C + KA ++ + M+ K
Sbjct: 349 IHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRK-- 406
Query: 249 LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQI 308
G + YN + GLC +D E L +L M + P+ + +TVI+G C++
Sbjct: 407 -----EGADRTRI-YNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKM 460
Query: 309 GELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQ- 365
G + D A+ LD D + D T ++VM LA+G + AL
Sbjct: 461 GRV-----------DDAMKVLD----DMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDV 505
Query: 366 LDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
L+ M + VAY+ +I GL K + EA
Sbjct: 506 LNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEA 538
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 182/477 (38%), Gaps = 84/477 (17%)
Query: 47 QSLKRLCREGRIP-EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIA 105
+ + +C R P EA ++L+ + +G D SSVI C+ + D AH +A
Sbjct: 59 RRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLA 118
Query: 106 KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 165
GF P T N V I R + R + +R+I
Sbjct: 119 SGFIPDERTCN---------------VIIARLLYSRSPVSTLGVIHRLIG---------- 153
Query: 166 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
K P Y+ LM LC R+ +A L +M G PD +T+T L+
Sbjct: 154 --------FKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIG 205
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 285
C + E A + DEM V G P +T + LI G + VE ++++
Sbjct: 206 GYCEIRELEVAHKVFDEM--------RVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKE 257
Query: 286 M-----PEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDS 340
+ E S A +++ ++ C+ G +E+ SL +S
Sbjct: 258 LWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM--------------SLCES 303
Query: 341 LSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKR 400
++ E Y +++ A ++ + M G +Y+ +I+GL K A +
Sbjct: 304 VNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQ 363
Query: 401 DLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHL 460
LL S+ F PS Y +L+E+ L K+ D A +L L
Sbjct: 364 -LLEEGSE-FEFFPSEYTYKLLMES-----------LCKEL-------DTGKAR-NVLEL 402
Query: 461 KNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
+ +G ++T +YN+ + C N + N+ + M+ P +++ +I+ L
Sbjct: 403 MLRKEGADRTR--IYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGL 457
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 123/281 (43%), Gaps = 33/281 (11%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVI-GWFCNLNKIDSAHTLLSEMIAKG 107
L+ LC+E + +A + +K + D +T++ ++ GW + A EM KG
Sbjct: 187 LRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGW----KSSEEAEAFFEEMKGKG 241
Query: 108 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
P VVTYNSL+ YC+ ++KA ++ M E +PDV +Y VI
Sbjct: 242 LKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAR 301
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
+ G +PD A Y++ + C+ +RL +A L EM++ G+SP+ TY
Sbjct: 302 EVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVL 361
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPD---------------------------FVTGFSPAI 260
L + +++ L+ M+ LP+ V GF
Sbjct: 362 SLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYS 421
Query: 261 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTV 301
+ + L+ LC L +VEEA + L M E G P+ VS+ +
Sbjct: 422 LVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 39/179 (21%)
Query: 179 FPDAATYSSLMEALCVEQRLSEAFDLFREM------------------------------ 208
F D A +++L+ LC E+ +++A +++ +
Sbjct: 177 FFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEE 236
Query: 209 LRG-GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALI 267
++G G+ PD +TY L++ C E KA+ L D+M + PD ++TY +I
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPD--------VITYTTVI 288
Query: 268 HGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAI 326
GL + + ++A E+L+ M E G P+ +Y+ I FC LG A +L E K +
Sbjct: 289 GGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGL 347
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 8/248 (3%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
TY+ ++ +C + + A + ++MI G P +V +N ++ R A+ + M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 359
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
+G P+V SY +I FC VD G+ PDAA Y+ L+ +++L
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 258
++L +EM G PD TY L+ ++++MI P
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ--------NEIEP 471
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELK 318
+I T+N ++ E + M + G+ P+ SY+ +I G G+ +A
Sbjct: 472 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 531
Query: 319 IETEDKAI 326
E DK +
Sbjct: 532 EEMLDKGM 539
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 152/371 (40%), Gaps = 33/371 (8%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R R P + +G RTY+S++ + ++ ++L EM KG ++
Sbjct: 172 RHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TME 230
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
T+ + A+ KAVGI M + V++ N ++
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
++ P+ TY+ L+ C + L EA ++ +M+ G+ PD + + +L +
Sbjct: 291 KER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 349
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
+ A L M KG P+ + +Y +I C +E A+E M + GL P
Sbjct: 350 SDAIKLFHVMKSKGPCPN--------VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQP 401
Query: 294 NAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED-------- 345
+A Y+ +I+GF +L YEL E ++K D TY++L+ ++ +
Sbjct: 402 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKG-HPPDGKTYNALIKLMANQKMPEHGTRI 460
Query: 346 --------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 391
T++ +M Y N + + +M + G +Y+VLI GL
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 520
Query: 392 KARTREAKRDL 402
+ ++REA R L
Sbjct: 521 EGKSREACRYL 531
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 10/222 (4%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L+ L R + +A ++ VMK KG + R+Y+ +I FC + +++A +M+ G
Sbjct: 340 LEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL 399
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P Y L+ + + +D +L+ M E+G PD +YN +I
Sbjct: 400 QPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTR 459
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ I P T++ +M++ V + ++ EM++ G+ PD+ +YT L+
Sbjct: 460 IYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI 519
Query: 229 LVGEFTKAFHLHDEMIHKG----------FLPDFVTGFSPAI 260
G+ +A +EM+ KG F DF G P I
Sbjct: 520 SEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEI 561
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
CR + EA ++ M GL D ++ ++ K A L M +KG P+V
Sbjct: 309 CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNV 368
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
+Y ++ +C++ S++ A+ M + GL PD Y +I+ F
Sbjct: 369 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 428
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
+KG PD TY++L++ + ++ ++ +M++ + P T+ ++ + +
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 488
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
+ + DEMI KG PD +Y LI GL + EA L M + G+
Sbjct: 489 YEMGRAVWDEMIKKGICPD--------DNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 540
Query: 293 PNAVSYSTVISGFCQIGE 310
+ Y+ + F + G+
Sbjct: 541 TPLIDYNKFAADFHRGGQ 558
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 117/304 (38%), Gaps = 48/304 (15%)
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
GF+ A TYN+++ L + E + +L M GL +++ + F E KA
Sbjct: 190 GFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKA 248
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLSYED---------------------TYSSVMND 353
+ E K + + +T + L+DSL TY+ ++N
Sbjct: 249 VGI-FELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 307
Query: 354 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM 413
+ N+ A ++ +DM G VA++V++ GL + + +A + + S G
Sbjct: 308 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG--PC 365
Query: 414 PSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDG 472
P+ Y I++ + C S ++ +E D L DAA
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA--------------------- 404
Query: 473 GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINN 532
+Y LI + Y + EM GH P + ALI + + +M + + N
Sbjct: 405 -VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 463
Query: 533 TLRS 536
+++
Sbjct: 464 MIQN 467
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 152/335 (45%), Gaps = 22/335 (6%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
D T++S++ + +I++ + M+A+G P++V+YN+L+ AY A+ +L
Sbjct: 319 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 378
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 195
+ + G+ PDV SY +++ + + P+ TY++L++A
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 438
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
L+EA ++FR+M + G+ P+ ++ LL AC + + + G
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR--------G 490
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
+ YN+ I +E+A+ + + M + + ++V+++ +ISG C++ + +A
Sbjct: 491 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 550
Query: 316 ELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 375
E ED +I L+ E YSSV+ Y +G + A + + M G
Sbjct: 551 SYLKEMEDLSI-------------PLTKE-VYSSVLCAYSKQGQVTEAESIFNQMKMAGC 596
Query: 376 LSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 410
+AY+ +++ + + +A L + ++G
Sbjct: 597 EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 631
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 109/500 (21%), Positives = 197/500 (39%), Gaps = 78/500 (15%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R G+ A +++ M + TY+++I + A + +M G P +V
Sbjct: 190 RAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLV 249
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
T+N ++ AY KA+ M + PD ++N +I
Sbjct: 250 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 309
Query: 174 VDKG--IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+K PD T++S+M V+ + +F M+ G+ P+ ++Y L+ A + G
Sbjct: 310 REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 369
Query: 232 EFTKAFHLHDEMIHKGFLPDFVT--------GFS-------------------PAIVTYN 264
A + ++ G +PD V+ G S P +VTYN
Sbjct: 370 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 429
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
ALI + EA+EI R M + G+ PN VS T+++ C ++ K
Sbjct: 430 ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA-CS------------RSKKK 476
Query: 325 AIWWLDEDTYDSLMDSLSYE---DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 381
++ DT S S Y+S + Y+ +++A+ L M + + V
Sbjct: 477 ----VNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 532
Query: 382 YSVLINGLHKKARTREAKRDLLYIASDGFLSMP-SYTVYDILLENCSNSEFKSLVELVKD 440
+++LI+G + ++ EA + Y+ LS+P + VY +L C+ S+ + E
Sbjct: 533 FTILISGSCRMSKYPEA---ISYLKEMEDLSIPLTKEVYSSVL--CAYSKQGQVTEAESI 587
Query: 441 YSMRDLS--DDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 498
++ ++ + A+T+MLH N S KA +++EM
Sbjct: 588 FNQMKMAGCEPDVIAYTSMLHAYNA---------------------SEKWGKACELFLEM 626
Query: 499 VHYGHAPHMFSVLALISALD 518
G P + AL+ A +
Sbjct: 627 EANGIEPDSIACSALMRAFN 646
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 129/301 (42%), Gaps = 51/301 (16%)
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
PDA TY +L+ A + A +L +MLR ++P TY L+NAC G + +A +
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 240 HDEMIHKGFLPDFVT---------------------------GFSPAIVTYNALIHGLCF 272
+M G PD VT P T+N +I+ L
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295
Query: 273 LDRVEEALEILRGMPEMGLS--PNAVSYSTVISGFCQIGELGKAYELKIETED-KAIWWL 329
L + +AL++ M E P+ V++++++ Y +K E E+ +A+
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIM----------HLYSVKGEIENCRAV--F 343
Query: 330 DEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 389
+ + L ++ +Y+++M Y G AL + D+ ++G + V+Y+ L+N
Sbjct: 344 EAMVAEGLKPNIV---SYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 400
Query: 390 HKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDD 449
+ + +AK L + + P+ Y+ L++ ++ F L E V+ + R + D
Sbjct: 401 GRSRQPGKAKEVFLMMRKE--RRKPNVVTYNALIDAYGSNGF--LAEAVEIF--RQMEQD 454
Query: 450 A 450
Sbjct: 455 G 455
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 136/339 (40%), Gaps = 26/339 (7%)
Query: 55 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 114
+G I + E M +GL + +Y++++G + +A ++L ++ G P VV+
Sbjct: 333 KGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS 392
Query: 115 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 174
Y L+ +Y R KA + M + P+V +YN +I +
Sbjct: 393 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 452
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 234
GI P+ + +L+ A ++ + G++ + Y + + E
Sbjct: 453 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 512
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
KA L+ M K D VT+ LI G C + + EA+ L+ M ++ +
Sbjct: 513 KAIALYQSMRKKKVKADS--------VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLT 564
Query: 295 AVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDT--YSSVMN 352
YS+V+ + + G++ +A E ++ + + D Y+S+++
Sbjct: 565 KEVYSSVLCAYSKQGQVTEA----------------ESIFNQMKMAGCEPDVIAYTSMLH 608
Query: 353 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 391
Y A +A +L +M +G +A S L+ +K
Sbjct: 609 AYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 647
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 122/319 (38%), Gaps = 41/319 (12%)
Query: 8 FTAALKMALNVNI--YNGMIRGFATAAGKSDSESKKVGEAFQSLKRL------------- 52
+AA +N+N YN I + AA E +K +QS+++
Sbjct: 483 LSAAQSRGINLNTAAYNSAIGSYINAA-----ELEKAIALYQSMRKKKVKADSVTFTILI 537
Query: 53 ---CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS 109
CR + PEA L+ M+ + L + YSSV+ + ++ A ++ ++M G
Sbjct: 538 SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE 597
Query: 110 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 169
P V+ Y S++ AY + KA + M G+ PD + + ++ F
Sbjct: 598 PDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVL 657
Query: 170 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 229
+K I A + + A Q A DL + M P Y L+
Sbjct: 658 MDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM-----DP----YLPSLS---- 704
Query: 230 VGEFTKAFHLHD-----EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 284
+G + HL E + K F +G + TY L+ L + + +E+L
Sbjct: 705 IGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLE 764
Query: 285 GMPEMGLSPNAVSYSTVIS 303
M G+ P+ Y +IS
Sbjct: 765 WMSGAGIQPSNQMYRDIIS 783
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 106/242 (43%), Gaps = 11/242 (4%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
D RT++ +I FC K D A ++ M F+P VVTY S V AYC+ + +L
Sbjct: 272 DARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEML 331
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 195
M E G +P+V +Y V+ + G PDA YSSL+ L
Sbjct: 332 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 391
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM---IHKGFLPDF 252
R +A ++F +M GV D L Y +++A H DEM + K +
Sbjct: 392 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAAL--------HHSRDEMALRLLKRMEDEE 443
Query: 253 VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELG 312
SP + TY L+ C +++ +L M + +S + +Y +I G C G++
Sbjct: 444 GESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVE 503
Query: 313 KA 314
+A
Sbjct: 504 EA 505
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 11/245 (4%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C+ + +A M+++MK D TY+S + +C + +L EM G +P+
Sbjct: 283 FCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPN 342
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
VVTY ++ + + V +A+G+ M E G PD Y+ +I
Sbjct: 343 VVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFE 402
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLR---GGVSPDELTYTRLLNACC 228
++G+ D Y++++ A R A L + M SP+ TY LL CC
Sbjct: 403 DMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCC 462
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
+ L M+ D + TY LI GLC +VEEA
Sbjct: 463 HKKKMKLLGILLHHMVKNDVSID--------VSTYILLIRGLCMSGKVEEACLFFEEAVR 514
Query: 289 MGLSP 293
G+ P
Sbjct: 515 KGMVP 519
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 178 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 237
I PDA T++ L+ C ++ +A + M +PD +TYT + A C G+F +
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 238 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVS 297
+ +EM G +P +VTY ++H L +V EAL + M E G P+A
Sbjct: 329 EMLEEMRE--------NGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKF 380
Query: 298 YSTVISGFCQIGELGKAYEL 317
YS++I + G A E+
Sbjct: 381 YSSLIHILSKTGRFKDAAEI 400
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 133/316 (42%), Gaps = 34/316 (10%)
Query: 90 LNKIDSAHTLLSEMIAKGFSP-SVVTYNSLVFAYCRR--DSVDKAVGI-LRAMAERGLSP 145
LNK D++H E + K S VV SLV RR + ++A G + A ++ G
Sbjct: 109 LNKKDTSH----EDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVH 164
Query: 146 DVDSYNRVISKF--CXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFD 203
+YN ++ C ++ T S +M L + ++A D
Sbjct: 165 SGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVD 224
Query: 204 LFREMLRG-GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVT 262
F EM + GV D + L++A LV E + E H+ FL F T P T
Sbjct: 225 AFLEMEKSYGVKTDTIAMNSLMDA--LVKENSI------EHAHEVFLKLFDT-IKPDART 275
Query: 263 YNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETE 322
+N LIHG C + ++A ++ M +P+ V+Y++ + +C+ G+ + E+
Sbjct: 276 FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM----- 330
Query: 323 DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAY 382
L+E + ++ TY+ VM+ + AL + M DG + Y
Sbjct: 331 ------LEEMRENGCNPNVV---TYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
Query: 383 SVLINGLHKKARTREA 398
S LI+ L K R ++A
Sbjct: 382 SSLIHILSKTGRFKDA 397
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 3/177 (1%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L + ++ EA + E MK G D + YSS+I + A + +M +G
Sbjct: 353 LGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRD 412
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAE---RGLSPDVDSYNRVISKFCXXXXXXXXXX 168
V+ YN+++ A + A+ +L+ M + SP+V++Y ++ C
Sbjct: 413 VLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGI 472
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
V + D +TY L+ LC+ ++ EA F E +R G+ P + T L++
Sbjct: 473 LLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVD 529
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 21/220 (9%)
Query: 64 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 123
M +VM+ + +D Y+ +I C K D A + + ++ G P V TYN ++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 124 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 183
R S+ +A + M RGL PD +YN +I C + + +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
T+++L+ C R+ + +LF EM R G+ + +TYT L++ VG+F A + EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 244 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 283
+ G +S +I T+ ++ LC + +A+ +L
Sbjct: 168 VSNGV-------YSSSI-TFRDILPQLCSRKELRKAVAML 199
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 22/165 (13%)
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
D A Y+ ++ LC + EA ++F +L G+ PD TY ++ +A L+
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLY 68
Query: 241 DEMIHKGFLPDFVT------------------GFSPAIVTYNALIHGLCFLDRVEEALEI 282
EMI +G +PD +T S + T+N LI+G C RV++ + +
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNL 128
Query: 283 LRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIW 327
M G+ N ++Y+T+I GF Q+G+ A ++ E ++
Sbjct: 129 FCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVY 173
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC+ G+ EA + + GL D +TY+ +I + + + A L +EMI +G P
Sbjct: 24 LCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF----SSLGRAEKLYAEMIRRGLVPD 79
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+TYNS++ C+++ + +A R +S ++N +I+ +C
Sbjct: 80 TITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVKDGMNLFC 130
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+GI + TY++L+ + A D+F+EM+ GV +T+ +L C
Sbjct: 131 EMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRK 190
Query: 232 EFTKA 236
E KA
Sbjct: 191 ELRKA 195
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 115 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 174
YN ++ C+ D+A I + GL PDV +YN +I +F +
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-RF---SSLGRAEKLYAEMI 72
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 234
+G+ PD TY+S++ LC + +L++A VS T+ L+N C
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCSTFNTLINGYCKATRVK 123
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
+L EM +G + + ++TY LIHG + AL+I + M G+ +
Sbjct: 124 DGMNLFCEMYRRGIVAN--------VITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSS 175
Query: 295 AVSYSTVISGFCQIGELGKAYELKIE 320
++++ ++ C EL KA + ++
Sbjct: 176 SITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 19/189 (10%)
Query: 263 YNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETE 322
YN +IHGLC + +EA I + GL P+ +Y+ +I + LG+A +L E
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI 72
Query: 323 DKAIWWLDEDTYDSLMDSLSYED-------------TYSSVMNDYLAEGNMQRALQLDHD 369
+ + D TY+S++ L ++ T+++++N Y ++ + L +
Sbjct: 73 RRGLVP-DTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCE 131
Query: 370 MSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNS 429
M R G +++ + Y+ LI+G + A + S+G S S T DIL + CS
Sbjct: 132 MYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYS-SSITFRDILPQLCSRK 190
Query: 430 EFKSLVELV 438
E + V ++
Sbjct: 191 ELRKAVAML 199
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 78/193 (40%), Gaps = 26/193 (13%)
Query: 21 YNGMIRGFATAAGKSDSESKKVGEAF------------QSLKRLCREGRIPEAEQMLEVM 68
YN +I G AGK D + G F Q+ + R + AE++ M
Sbjct: 17 YNIIIHGLC-KAGKFD----EAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEKLYAEM 71
Query: 69 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 128
+GL D TY+S+I C NK+ A + S S T+N+L+ YC+ V
Sbjct: 72 IRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRV 122
Query: 129 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 188
+ + M RG+ +V +Y +I F V G++ + T+ +
Sbjct: 123 KDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDI 182
Query: 189 MEALCVEQRLSEA 201
+ LC + L +A
Sbjct: 183 LPQLCSRKELRKA 195
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 109/276 (39%), Gaps = 8/276 (2%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
++ +C+EGR E+ ++L MK G+ + T + + G A LL +M GF
Sbjct: 481 IEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGF 540
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P + LV C A L +A G + + I
Sbjct: 541 EPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLE 600
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
G PD Y L++ALC R EA LF EM+ G+ P TY +++ C
Sbjct: 601 LFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWC 660
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
GE + M PD ++TY +LIHGLC R EA+ M
Sbjct: 661 KEGEIDRGLSCIVRMYEDEKNPD--------VITYTSLIHGLCASGRPSEAIFRWNEMKG 712
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
PN +++ +I G C+ G G+A E E+K
Sbjct: 713 KDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEK 748
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/451 (20%), Positives = 185/451 (41%), Gaps = 59/451 (13%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C+ G++ +A +++E+++ + + L+ +TY +I F ++ID A L +M G +
Sbjct: 258 FCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNAD 317
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+ Y+ L+ C+ ++ A+ + + G+ PD +++ F
Sbjct: 318 IALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVII 377
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG----GVS------------- 214
+DK Y SL E + EA+ + ++ GVS
Sbjct: 378 GDIDKKSV--MLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAI 435
Query: 215 -PDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFL 273
PD + + ++N + A L +++ G + P + YN +I G+C
Sbjct: 436 LPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLI--------PGPMMYNNIIEGMCKE 487
Query: 274 DRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIW-WLDED 332
R EE+L++L M + G+ P+ + + + + + A +L + W+
Sbjct: 488 GRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHT 547
Query: 333 TY--------DSLMDSLSYED------------TYSSVMNDYLAEGNMQRALQLDHDMSR 372
T+ +D+ Y D ++ ++ + + R L+L D+
Sbjct: 548 TFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICA 607
Query: 373 DGYLSSYVAYSVLINGLHKKARTREAKRDLLY--IASDGFLSMPSYTVYDILLEN-CSNS 429
+G+ +AY VLI L K RT EA D+L+ + S G P+ Y+ +++ C
Sbjct: 608 NGHCPDVIAYHVLIKALCKACRTMEA--DILFNEMVSKGL--KPTVATYNSMIDGWCKEG 663
Query: 430 EF-KSLVELVKDYSMRDLSDDAATAHTTMLH 459
E + L +V+ Y D + +T+++H
Sbjct: 664 EIDRGLSCIVRMYE--DEKNPDVITYTSLIH 692
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 16/222 (7%)
Query: 29 ATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFC 88
+TAA +++ V + + +C G P D Y +I C
Sbjct: 582 STAAIDGLIKNEGVDRGLELFRDICANGHCP----------------DVIAYHVLIKALC 625
Query: 89 NLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVD 148
+ A L +EM++KG P+V TYNS++ +C+ +D+ + + M E +PDV
Sbjct: 626 KACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVI 685
Query: 149 SYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 208
+Y +I C K +P+ T+ +L++ LC EA FREM
Sbjct: 686 TYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREM 745
Query: 209 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 250
+ PD Y L+++ F + EM+HKG P
Sbjct: 746 EEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 108/530 (20%), Positives = 189/530 (35%), Gaps = 115/530 (21%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS-- 111
+E RI +A Q+ E M+ G+ D Y +IG C ++ A +L E+ G P
Sbjct: 295 KESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRG 354
Query: 112 -------------------------------VVTYNSLVFAYCRRDSVDKAVGILRAMA- 139
++ Y SL + R D V +A ++ +
Sbjct: 355 ILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMG 414
Query: 140 -----------------ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 182
+ + PD DS + VI+ V G+ P
Sbjct: 415 NYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGP 474
Query: 183 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 242
Y++++E +C E R E+ L EM GV P + T + +F A L +
Sbjct: 475 MMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKK 534
Query: 243 MIHKGFLP-----DFVT----------------------GFSPAIVTYNALIHGLCFLDR 275
M GF P F+ GF +V A I GL +
Sbjct: 535 MRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEG 594
Query: 276 VEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYD 335
V+ LE+ R + G P+ ++Y +I C+ +A L +E
Sbjct: 595 VDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADIL-----------FNEMVSK 643
Query: 336 SLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKART 395
L +++ TY+S+++ + EG + R L M D + Y+ LI+GL R
Sbjct: 644 GLKPTVA---TYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRP 700
Query: 396 REAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHT 455
EA + ++ ++C + + + L++ S +A
Sbjct: 701 SEA----------------IFRWNEMKGKDCYPNRI-TFMALIQGLCKCGWSGEA----- 738
Query: 456 TMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 505
+++ + + E + D +Y L+ S N++ + ++ EMVH G P
Sbjct: 739 -LVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 110/489 (22%), Positives = 187/489 (38%), Gaps = 90/489 (18%)
Query: 89 NLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVD 148
N + ++ L EM GF T ++ YC ++A+ + + RG +
Sbjct: 191 NSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHI 250
Query: 149 SYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 208
S V+S FC ++ I + TY L+ E R+ +AF LF +M
Sbjct: 251 STILVVS-FCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKM 309
Query: 209 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD------FVTGFS----- 257
R G++ D Y L+ C + A L+ E+ G PD + FS
Sbjct: 310 RRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESEL 369
Query: 258 --------------PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVIS 303
++ Y +L G D V EA ++ + MG +Y +
Sbjct: 370 SRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNL--MG------NYES--D 419
Query: 304 GFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 363
G +I +L K + +KAI L DS D+ S V+N + + A
Sbjct: 420 GVSEIVKLLKDH-------NKAI----------LPDS----DSLSIVINCLVKANKVDMA 458
Query: 364 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT---VYD 420
+ L HD+ ++G + + Y+ +I G+ K+ R+ E+ + LL D + +T +Y
Sbjct: 459 VTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLK-LLGEMKDAGVEPSQFTLNCIYG 517
Query: 421 ILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMY----- 475
L E C +F ++L+K MR + HTT L +K + D Y
Sbjct: 518 CLAERC---DFVGALDLLK--KMRFYGFEPWIKHTTFL-VKKLCENGRAVDACKYLDDVA 571
Query: 476 -----------NLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL------- 517
I ++ V + ++ ++ GH P + + LI AL
Sbjct: 572 GEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTM 631
Query: 518 DDDRMYNEM 526
+ D ++NEM
Sbjct: 632 EADILFNEM 640
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 153/407 (37%), Gaps = 61/407 (14%)
Query: 128 VDKAVGILRAMAERGLS-PDVDSYN---RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 183
VD+A + + E GL P+ +YN ISK D G D
Sbjct: 157 VDEASSVFDRVREMGLCVPNAYTYNCLLEAISK-SNSSSVELVEARLKEMRDCGFHFDKF 215
Query: 184 TYSSLMEALCVEQRLSEAFDLFREML-RGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 242
T + +++ C + A +F E+L RG + DE T L+ + C G+ KAF L +
Sbjct: 216 TLTPVLQVYCNTGKSERALSVFNEILSRGWL--DEHISTILVVSFCKWGQVDKAFELIEM 273
Query: 243 MIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVI 302
+ + ++ T Y LIHG R+++A ++ M MG++ + Y +I
Sbjct: 274 LEERDIRLNYKT--------YCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLI 325
Query: 303 SGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQR 362
G C+ +L A L +E + I D L+ S S E S + + + + +
Sbjct: 326 GGLCKHKDLEMALSLYLEIKRSGIP-PDRGILGKLLCSFSEESELSRITEVIIGDIDKKS 384
Query: 363 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDIL 422
+ L Y L G + EA Y+ L
Sbjct: 385 VMLL---------------YKSLFEGFIRNDLVHEA-----------------YSFIQNL 412
Query: 423 LENCSNSEFKSLVELVKDYSMRDLSD-DAATAHTTMLHLKNKTDG---------ENKTDG 472
+ N + +V+L+KD++ L D D+ + L NK D +N
Sbjct: 413 MGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIP 472
Query: 473 G--MYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
G MYN +I C+ ++ + EM G P F++ + L
Sbjct: 473 GPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCL 519
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 119/270 (44%), Gaps = 25/270 (9%)
Query: 46 FQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTL--LSEM 103
+ +L+ LC+ + A + E M G+ + ++I WFC K + A+++ L++
Sbjct: 270 YLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKT 329
Query: 104 IAKGFSPSVVTYNSLVFAYCRRDSV----DKAVGILRAMAER-GLSPDVDSYNRVISKFC 158
K P V +L+ A C+ D + +G L A R G+ P ++ VI C
Sbjct: 330 KEKSLPPRFVA--TLITALCKNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLC 383
Query: 159 XXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 218
+ KG P A ++ ++ A L EA ++ + M G+ PD
Sbjct: 384 RMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVY 443
Query: 219 TYTRLLNACCLVGEFTKAFHLHDEMI--HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRV 276
TYT +++ G +A + E HK P VTY+ALI G C ++
Sbjct: 444 TYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSP----------VTYHALIRGYCKIEEY 493
Query: 277 EEALEILRGMPEMGLSPNAVSYSTVISGFC 306
+EAL++L M G+ PNA Y+ +I FC
Sbjct: 494 DEALKLLNEMDRFGVQPNADEYNKLIQSFC 523
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 2/199 (1%)
Query: 52 LCR-EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 110
LC+ +G I A++ML + + + +S VI C + + A LL +MI+KG +P
Sbjct: 346 LCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAP 405
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
+N +V A + +D+A +L+ M RGL PDV +Y +IS +
Sbjct: 406 GNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEIL 465
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
K TY +L+ C + EA L EM R GV P+ Y +L+ + CL
Sbjct: 466 AEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLK 525
Query: 231 G-EFTKAFHLHDEMIHKGF 248
++ KA L +EM KG
Sbjct: 526 ALDWEKAEVLFEEMKQKGL 544
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 134/321 (41%), Gaps = 37/321 (11%)
Query: 81 SSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAE 140
+ +I F L K +A + S+ GF+P+ TY + A C+R +D A + M +
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 294
Query: 141 RGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC------- 193
G+ + + +I+ FC K ++L+ ALC
Sbjct: 295 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTIT 354
Query: 194 -VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDF 252
++ L DL E R G+ P ++ ++++ C + A L +MI KG P
Sbjct: 355 FAQEMLG---DLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKG--P-- 403
Query: 253 VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELG 312
+P +N ++H ++EA E+L+ M GL P+ +Y+ +ISG+ + G +
Sbjct: 404 ----APGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMD 459
Query: 313 KAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSR 372
+A E+ E + K + L TY +++ Y AL+L ++M R
Sbjct: 460 EAQEILAEAKKK---------HKKLSPV-----TYHALIRGYCKIEEYDEALKLLNEMDR 505
Query: 373 DGYLSSYVAYSVLINGLHKKA 393
G + Y+ LI KA
Sbjct: 506 FGVQPNADEYNKLIQSFCLKA 526
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 130/319 (40%), Gaps = 35/319 (10%)
Query: 44 EAFQSLKR-LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE 102
E+F +L R LC + A+ + K F D +Y+ +I + L +++ +L E
Sbjct: 222 ESFNALLRCLCERSHVSAAKSVFNAKKGNIPF-DSCSYNIMISGWSKLGEVEEMEKVLKE 280
Query: 103 MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 162
M+ GF P ++Y+ L+ R ++ +V I + +G PD + YN +I F
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 163 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 222
+D+ P+ TYS L+ L +++S+A ++F EML GV P T
Sbjct: 341 FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTS 400
Query: 223 LLNACCLVGEFTKAFHLHD----------EMIHKGFLPDFV-----------------TG 255
L C G A ++ E +K L +G
Sbjct: 401 FLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESG 460
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
+ + Y ++ GLC + +E A+ ++ G PN YS + S + AY
Sbjct: 461 YPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAY 520
Query: 316 E--LKIE----TEDKAIWW 328
+ LKI+ TE+ +W
Sbjct: 521 KLFLKIKKARATENARSFW 539
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 141/352 (40%), Gaps = 25/352 (7%)
Query: 39 SKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHT 98
+K VG L+ L R +L+ M C+G+ D + + F ++ + A
Sbjct: 148 TKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIE 207
Query: 99 LLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSP-DVDSYNRVISKF 157
L E + G S ++N+L+ C R V A + A++G P D SYN +IS +
Sbjct: 208 LFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYNIMISGW 265
Query: 158 CXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDE 217
V+ G PD +YS L+E L R++++ ++F + G PD
Sbjct: 266 SKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDA 325
Query: 218 LTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVE 277
Y ++ +F ++ + M+ + P+ + TY+ L+ GL +V
Sbjct: 326 NVYNAMICNFISARDFDESMRYYRRMLDEECEPN--------LETYSKLVSGLIKGRKVS 377
Query: 278 EALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSL 337
+ALEI M G+ P ++ + C G A + + KA + E Y L
Sbjct: 378 DALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVI-YQKSRKAGCRISESAYKLL 436
Query: 338 MDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 389
+ LS ++N + +M GY S Y +++GL
Sbjct: 437 LKRLSRFGKCGMLLNVW-------------DEMQESGYPSDVEVYEYIVDGL 475
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 110/264 (41%), Gaps = 27/264 (10%)
Query: 137 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 196
A+ E G++ DV SY+ ++ V +G+ PD + M++
Sbjct: 141 AVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVH 200
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 256
+ A +LF E GV ++ LL C + A + + KG +P F
Sbjct: 201 YVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIP-----F 253
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
+YN +I G L VEE ++L+ M E G P+ +SYS +I G + G + + E
Sbjct: 254 DSC--SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVE 311
Query: 317 LKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDG 374
+ +D++ + D Y++++ ++++ + +++ M +
Sbjct: 312 I----------------FDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEE 355
Query: 375 YLSSYVAYSVLINGLHKKARTREA 398
+ YS L++GL K + +A
Sbjct: 356 CEPNLETYSKLVSGLIKGRKVSDA 379
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 124/313 (39%), Gaps = 23/313 (7%)
Query: 17 NVNIYNGMIRGFATAAGKSDSESKKVG-----------EAFQSLKRLCR----EGRIPEA 61
NV + G GK+ S K + QSL L G + +A
Sbjct: 111 NVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKA 170
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
+ + K L + +++ +I F + ++A + EM+ PSVVTYNSL+
Sbjct: 171 KSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGF 230
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 181
CR D + KA +L M ++ + P+ ++ ++ C +G P
Sbjct: 231 LCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 241
Y LM L R+ EA L EM + + PD + Y L+N C +A+ +
Sbjct: 291 LVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLT 350
Query: 242 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTV 301
EM KG P+ TY +I G C ++ + L +L M P ++ +
Sbjct: 351 EMQMKGCKPN--------AATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCM 402
Query: 302 ISGFCQIGELGKA 314
++G + G L A
Sbjct: 403 VAGLIKGGNLDHA 415
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 114/275 (41%), Gaps = 27/275 (9%)
Query: 61 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 120
+Q+L +++ + + E + +I + +D A + ++ + ++ + N+L+
Sbjct: 100 VDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLIN 159
Query: 121 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 180
++KA + L P+ S+N +I F ++ + P
Sbjct: 160 VLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQP 219
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
TY+SL+ LC + +A L +M++ + P+ +T+ L+ C GE+ +A L
Sbjct: 220 SVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLM 279
Query: 241 DEMIHKGFLPDFVT---------------------------GFSPAIVTYNALIHGLCFL 273
+M ++G P V P +V YN L++ LC
Sbjct: 280 FDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTE 339
Query: 274 DRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQI 308
RV EA +L M G PNA +Y +I GFC+I
Sbjct: 340 CRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRI 374
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 140/363 (38%), Gaps = 60/363 (16%)
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
G D +YSS+I D+ +L + + + L+ Y + SVDKA
Sbjct: 76 GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKA 135
Query: 132 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 191
+ + + + S N +I+ VD G A ++
Sbjct: 136 IDVFHKITSFDCVRTIQSLNTLIN----------------VLVDNGELEKAKSF------ 173
Query: 192 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 251
FD ++M + P+ +++ L+ ++ A + DEM+
Sbjct: 174 ----------FDGAKDMR---LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLE------ 214
Query: 252 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGEL 311
P++VTYN+LI LC D + +A +L M + + PNAV++ ++ G C GE
Sbjct: 215 --MEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEY 272
Query: 312 GKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMS 371
+A +L + E Y L Y +M+D G + A L +M
Sbjct: 273 NEAKKLMFDME-----------YRGCKPGLV---NYGILMSDLGKRGRIDEAKLLLGEMK 318
Query: 372 RDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSE 430
+ V Y++L+N L + R EA R L + G P+ Y ++++ C +
Sbjct: 319 KRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKG--CKPNAATYRMMIDGFCRIED 376
Query: 431 FKS 433
F S
Sbjct: 377 FDS 379
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 43/263 (16%)
Query: 258 PAIVTYNALIHGLCFLDRV--EEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
P V++N LI G FLD+ E A ++ M EM + P+ V+Y+++I C+ ++GKA
Sbjct: 184 PNSVSFNILIKG--FLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 316 ELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 375
L + K I T+ +M +G A +L DM G
Sbjct: 242 SLLEDMIKKRIR--------------PNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGC 287
Query: 376 LSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSL 434
V Y +L++ L K+ R EAK LL P +Y+IL+ + C+
Sbjct: 288 KPGLVNYGILMSDLGKRGRIDEAK--LLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEA 345
Query: 435 VELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNM 494
++ + M+ +AAT Y ++I CR + N+
Sbjct: 346 YRVLTEMQMKGCKPNAAT----------------------YRMMIDGFCRIEDFDSGLNV 383
Query: 495 YMEMVHYGHAPHMFSVLALISAL 517
M+ H P + + +++ L
Sbjct: 384 LNAMLASRHCPTPATFVCMVAGL 406
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC E R+PEA ++L M+ KG + TY +I FC + DS +L+ M+A P+
Sbjct: 336 LCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPT 395
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 158
T+ +V + ++D A +L M ++ LS ++ ++S C
Sbjct: 396 PATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 126/345 (36%), Gaps = 53/345 (15%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
G D +YSSL+ L + + R + V E + L+ G KA
Sbjct: 76 GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKA 135
Query: 237 FHLHDEMIHKGFLPDFVTGFS--PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
++ HK +T F I + N LI+ L +E+A G +M L PN
Sbjct: 136 I----DVFHK------ITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPN 185
Query: 295 AVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSL--MDSLSYEDTYSSVMN 352
+VS++ +I GF DK W +D + M+ TY+S++
Sbjct: 186 SVSFNILIKGFL----------------DKCDWEAACKVFDEMLEMEVQPSVVTYNSLIG 229
Query: 353 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 412
+M +A L DM + + V + +L+ GL K EAK+ + + G
Sbjct: 230 FLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRG--C 287
Query: 413 MPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDG 472
P Y IL+ D R D+A L L K D
Sbjct: 288 KPGLVNYGILMS---------------DLGKRGRIDEAK------LLLGEMKKRRIKPDV 326
Query: 473 GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 517
+YN+L+ C V +AY + EM G P+ + +I
Sbjct: 327 VIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGF 371
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 15/243 (6%)
Query: 102 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER-GLSPDVDSYNRVISKFCXX 160
+MI K P+ T+NS++ ++ R + I R M E G SP+V SYN ++ +C
Sbjct: 236 KMIGK-IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCAR 294
Query: 161 XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTY 220
+G+ D Y++++ LC + +A +LFR+M G+ LTY
Sbjct: 295 GLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTY 354
Query: 221 TRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC---FLDRVE 277
L+N C G+ ++ EM KGF D +T AL+ GLC RV
Sbjct: 355 EHLVNGYCKAGDVDSGLVVYREMKRKGFEADG--------LTIEALVEGLCDDRDGQRVV 406
Query: 278 EALEILR-GMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDS 336
EA +I++ + E P+ Y ++ C+ G++ +A ++ E K + ++TY +
Sbjct: 407 EAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKG-FKPSQETYRA 465
Query: 337 LMD 339
+D
Sbjct: 466 FID 468
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 47/221 (21%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C G + EAE++ E MK +G+ D Y+++IG C+ ++ A L +M KG +
Sbjct: 292 CARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTC 351
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
+TY LV YC+ VD + + R M +G
Sbjct: 352 LTYEHLVNGYCKAGDVDSGLVVYREMKRKGFE---------------------------- 383
Query: 173 XVDKGIFPDAATYSSLMEALCVE---QRLSEAFDLFREMLRGGV-SPDELTYTRLLNACC 228
D T +L+E LC + QR+ EA D+ ++ +R + P Y L+ C
Sbjct: 384 -------ADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLC 436
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHG 269
G+ +A ++ EM+ K GF P+ TY A I G
Sbjct: 437 EDGKMDRALNIQAEMVGK--------GFKPSQETYRAFIDG 469
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 137/325 (42%), Gaps = 58/325 (17%)
Query: 91 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSP-DVDS 149
+ID A ++ ++ ++G + + T N+L+ RR + R + GL VD
Sbjct: 176 KEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF--GLDDVSVDE 233
Query: 150 YNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREML 209
++I K I P+A T++S+M + E ++REM
Sbjct: 234 AKKMIGK---------------------IKPNATTFNSMMVSFYREGETEMVERIWREME 272
Query: 210 RG-GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 268
G SP+ +Y L+ A C G ++A + +EM +G + D IV YN +I
Sbjct: 273 EEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYD--------IVAYNTMIG 324
Query: 269 GLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELG-----------KAYEL 317
GLC V +A E+ R M G+ ++Y +++G+C+ G++ K +E
Sbjct: 325 GLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEA 384
Query: 318 KIETEDKAIWWLDED------------TYDSLMDSLSY--EDTYSSVMNDYLAEGNMQRA 363
T + + L +D D++ +++ Y + Y ++ +G M RA
Sbjct: 385 DGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRA 444
Query: 364 LQLDHDMSRDGYLSSYVAYSVLING 388
L + +M G+ S Y I+G
Sbjct: 445 LNIQAEMVGKGFKPSQETYRAFIDG 469
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 111/266 (41%), Gaps = 38/266 (14%)
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREM-------------LRGGVSPDELTYTR 222
+GI +T ++L+ + + S + ++RE+ + G + P+ T+
Sbjct: 191 RGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNS 250
Query: 223 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 282
++ + GE + EM + G SP + +YN L+ C + EA ++
Sbjct: 251 MMVSFYREGETEMVERIWREMEEE-------VGCSPNVYSYNVLMEAYCARGLMSEAEKV 303
Query: 283 LRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS 342
M G+ + V+Y+T+I G C E+ KA EL + K I L+
Sbjct: 304 WEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECT----------CLT 353
Query: 343 YEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL---HKKARTREAK 399
YE ++N Y G++ L + +M R G+ + + L+ GL R EA
Sbjct: 354 YE----HLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAA 409
Query: 400 RDLLYIASDGFLSMPSYTVYDILLEN 425
D++ A + PS Y++L++
Sbjct: 410 -DIVKDAVREAMFYPSRNCYELLVKR 434
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 8/224 (3%)
Query: 65 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 124
LE+ K G+ D TY+ +I C S++++++EM K P+ ++ ++ + +
Sbjct: 170 LEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYK 229
Query: 125 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 184
+ D+ ++R M E G+ V +YN +I C + + P++ T
Sbjct: 230 EEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVT 289
Query: 185 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 244
YS L+ C E+ L EA +LF M+ G PD Y L++ C G+F A L E +
Sbjct: 290 YSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESM 349
Query: 245 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
K ++P F +++ + L++GL +V+EA E++ + E
Sbjct: 350 EKNWVPSF------SVMKW--LVNGLASRSKVDEAKELIAVVKE 385
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 124/298 (41%), Gaps = 34/298 (11%)
Query: 119 VFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK-- 176
+ Y R + +D+++ R + + + V S N ++ C + K
Sbjct: 118 IILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFA-CLMAKDYKEANRVYLEMPKMY 176
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF--- 233
GI PD TY+ ++ LC S ++ + EM R + P ++ +++ +F
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 234 TKAFHLHDEM-IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
K + DE +H G + TYN +I LC + EA ++ G+ +
Sbjct: 237 RKVMRMMDEFGVHVG------------VATYNIMIQCLCKRKKSAEAKALIDGVMSCRMR 284
Query: 293 PNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMN 352
PN+V+YS +I GFC L +A L E + D + Y +L+ L
Sbjct: 285 PNSVTYSLLIHGFCSEENLDEAMNL-FEVMVCNGYKPDSECYFTLIHCLC---------- 333
Query: 353 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 410
G+ + AL L + ++ S+ L+NGL +++ EAK +L+ + + F
Sbjct: 334 ---KGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAK-ELIAVVKEKF 387
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 66/151 (43%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
+E + E +++ +M G+ + TY+ +I C K A L+ +++ P+ V
Sbjct: 229 KEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSV 288
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
TY+ L+ +C +++D+A+ + M G PD + Y +I C
Sbjct: 289 TYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRES 348
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDL 204
++K P + L+ L ++ EA +L
Sbjct: 349 MEKNWVPSFSVMKWLVNGLASRSKVDEAKEL 379
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 73/134 (54%)
Query: 110 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 169
P+ +TYNS++ +C++D VD A +L +MA +G SPDV +++ +I+ +C
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 170 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 229
+GI + TY++L+ C L A DL EM+ GV+PD +T+ +L C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 230 VGEFTKAFHLHDEM 243
E KAF + +++
Sbjct: 128 KKELRKAFAILEDL 141
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%)
Query: 73 LFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAV 132
+F TY+S+I FC +++D A +L M +KG SP VVT+++L+ YC+ VD +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 133 GILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEAL 192
I M RG+ + +Y +I FC + G+ PD T+ ++ L
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 193 CVEQRLSEAFDLFREMLR 210
C ++ L +AF + ++ +
Sbjct: 126 CSKKELRKAFAILEDLQK 143
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 178 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 237
IFP TY+S+++ C + R+ +A + M G SPD +T++ L+N C
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 238 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVS 297
+ EM +G + + VTY LIHG C + ++ A ++L M G++P+ ++
Sbjct: 66 EIFCEMHRRGIVAN--------TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 117
Query: 298 YSTVISGFCQIGELGKAYEL 317
+ +++G C EL KA+ +
Sbjct: 118 FHCMLAGLCSKKELRKAFAI 137
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 145 PDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDL 204
P +YN +I FC KG PD T+S+L+ C +R+ ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 205 FREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYN 264
F EM R G+ + +TYT L++ C VG+ A L +EMI G PD+ +T++
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDY--------ITFH 119
Query: 265 ALIHGLCFLDRVEEALEILRGMPE 288
++ GLC + +A IL + +
Sbjct: 120 CMLAGLCSKKELRKAFAILEDLQK 143
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 208 MLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALI 267
MLR + P +TY +++ C A + D M KG PD +VT++ LI
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPD--------VVTFSTLI 52
Query: 268 HGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
+G C RV+ +EI M G+ N V+Y+T+I GFCQ+G+L A +L
Sbjct: 53 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 102
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 258 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
P +TYN++I G C DRV++A +L M G SP+ V++ST+I+G+C+ + E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 318 KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLS 377
E + I ++ TY+++++ + G++ A L ++M G
Sbjct: 68 FCEMHRRGI--------------VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 113
Query: 378 SYVAYSVLINGLHKKARTREA 398
Y+ + ++ GL K R+A
Sbjct: 114 DYITFHCMLAGLCSKKELRKA 134
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 61/107 (57%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C++ R+ +A++ML+ M KG D T+S++I +C ++D+ + EM +G +
Sbjct: 20 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 79
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 158
VTY +L+ +C+ +D A +L M G++PD +++ +++ C
Sbjct: 80 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Query: 21 YNGMIRGFATAAGKSDSE-------SKKVGEAFQSLKRL----CREGRIPEAEQMLEVMK 69
YN MI GF D++ SK + L C+ R+ ++ M
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 70 CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVD 129
+G+ + TY+++I FC + +D+A LL+EMI+ G +P +T++ ++ C + +
Sbjct: 73 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 132
Query: 130 KAVGILRAMAE 140
KA IL + +
Sbjct: 133 KAFAILEDLQK 143
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 146/370 (39%), Gaps = 48/370 (12%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLL-------- 100
L L R G+ A +L+ M+ G L+ Y SV+ +++ A ++L
Sbjct: 134 LDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASD 193
Query: 101 -------SEMIAKGFSPSVVTYNSLVFAYCR---RDSVDKAVGILRAMAERGLSPDVDSY 150
+I + P V N L+ R R + L+ M + D SY
Sbjct: 194 NHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGM--KRFKFDTWSY 251
Query: 151 NRVISKF-CXXXXXXXXXXXXXXXVDKGIF-----PDAATYSSLMEALCVEQRLSEAFDL 204
N I F C ++ PD TY+SL+ LC+ + +A +
Sbjct: 252 NICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIV 311
Query: 205 FREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYN 264
+ E+ G PD TY L+ CC A ++ EM + GF+PD + YN
Sbjct: 312 WDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPD--------TIVYN 363
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
L+ G +V EA ++ M + G+ + +Y+ +I G + G + L + + K
Sbjct: 364 CLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKK 423
Query: 325 AIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 384
+D++ T+S V EG ++ A++L +M G+ V S
Sbjct: 424 G----------QFVDAI----TFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISS 469
Query: 385 LINGLHKKAR 394
L+ G HK+ R
Sbjct: 470 LLIGFHKQGR 479
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 108/277 (38%), Gaps = 34/277 (12%)
Query: 60 EAEQMLEVMKCKGLF-LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG------FSPSV 112
E +++ E +K F D +Y+ I F +D+A +L EM + F P +
Sbjct: 230 EFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDI 289
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
TYNSL+ C A+ + + G PD +Y +I C
Sbjct: 290 CTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGE 349
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
G PD Y+ L++ ++++EA LF +M++ GV TY L++ G
Sbjct: 350 MQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGR 409
Query: 233 FTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYNA 265
F L ++ KG D +T GFS +VT ++
Sbjct: 410 AEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISS 469
Query: 266 LIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVI 302
L+ G R + ++++ + E L PN + ++ +
Sbjct: 470 LLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGV 506
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%)
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
TYNS++ ++ ++ A G+L M E + D+ +YN +I
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
+G + D Y++L+ AL RL EA LF M G++PD ++Y ++ G+
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 234 TKAFHLHDEMIHKGFLPDFVT 254
+A+ M+ G LP+ VT
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVT 772
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 4/202 (1%)
Query: 23 GMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLF-LDERTYS 81
G+ RG A K DS + F S+ +G + A ++ E+ G+ L TY+
Sbjct: 578 GLARGQRVEA-KPDSFDVDMMNTFLSI--YLSKGDLSLACKLFEIFNGMGVTDLTSYTYN 634
Query: 82 SVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER 141
S++ F +A +L +M + + TYN ++ + D A +L + ++
Sbjct: 635 SMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQ 694
Query: 142 GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEA 201
G D+ YN +I+ GI PD +Y++++E +L EA
Sbjct: 695 GGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEA 754
Query: 202 FDLFREMLRGGVSPDELTYTRL 223
+ + ML G P+ +T T L
Sbjct: 755 YKYLKAMLDAGCLPNHVTDTIL 776
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
TY+S+M + + A + +M + D TY ++ +G A + D +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 244 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVIS 303
+G D IV YN LI+ L R++EA ++ M G++P+ VSY+T+I
Sbjct: 692 TKQGGYLD--------IVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIE 743
Query: 304 GFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYE 344
+ G+L +AY+ D L D+++D L E
Sbjct: 744 VNSKAGKLKEAYKYLKAMLDAGC--LPNHVTDTILDYLGKE 782
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 155/385 (40%), Gaps = 61/385 (15%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L+ + R + A + + M+ + L D TYS++I F DSA + L +M
Sbjct: 162 LRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRV 221
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
S +V Y++L+ R KA+ I + G++PD+ +YN +I+ +
Sbjct: 222 SGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARL 281
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM-------------------- 208
+ G+ P+ +YS+L+ + EA +F EM
Sbjct: 282 LIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYG 341
Query: 209 --------------LRG-GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 253
LR + P+ ++Y +L F +A HL M K +
Sbjct: 342 QLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQN-- 399
Query: 254 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGK 313
+VTYN +I E+A +++ M G+ PNA++YST+IS + + G+L +
Sbjct: 400 ------VVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 453
Query: 314 AYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRD 373
A L + + +D+ Y +++ ++YE G M A +L H++
Sbjct: 454 AATLFQKLRSSGV-EIDQVLYQTMI--VAYERV-----------GLMGHAKRLLHELK-- 497
Query: 374 GYLSSYVAYSVLINGLHKKARTREA 398
L + I L K RT EA
Sbjct: 498 --LPDNIPRETAITILAKAGRTEEA 520
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 129/310 (41%), Gaps = 47/310 (15%)
Query: 108 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
++PSV YN ++ R D A G+ M +R L+PD +Y+ +I+ F
Sbjct: 151 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 210
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRL---SEAFDLFREMLRGGVSPDELTYTRLL 224
+ D YS+L+E + +RL S+A +F + R G++PD + Y ++
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIE---LSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 225 NACCLVGEFTKAFHLHDEMIHKGFLPDFVT------------GFSPA------------- 259
N F +A L EM G LP+ V+ F A
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 260 --IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
+ T N +I LD V+EA + + +M + PN VSY+T++ + + G+A L
Sbjct: 328 LDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHL 387
Query: 318 KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLS 377
+ K I +++ TY++++ Y ++A L +M G
Sbjct: 388 FRLMQRKDI---EQNVV-----------TYNTMIKIYGKTMEHEKATNLVQEMQSRGIEP 433
Query: 378 SYVAYSVLIN 387
+ + YS +I+
Sbjct: 434 NAITYSTIIS 443
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 18/252 (7%)
Query: 99 LLSEMIAK----GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI 154
L+ +++AK G+ + + L+ Y +K + M E +P NR++
Sbjct: 102 LIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRIL 161
Query: 155 SKFCXXXXXXXXXXXXXXXVD-KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV 213
G+ P+ +Y+ LM+A C+ LS A+ LF +ML V
Sbjct: 162 DVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDV 221
Query: 214 SPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFL 273
PD +Y L+ C G+ A L D+M++KGF+PD LI GLC
Sbjct: 222 VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD------------RTLIGGLCDQ 269
Query: 274 DRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDT 333
+E + L M G SP+ + ++ GFC G++ +A ++ +E K L DT
Sbjct: 270 GMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDV-VEVVMKNGETLHSDT 328
Query: 334 YDSLMDSLSYED 345
++ ++ + ED
Sbjct: 329 WEMVIPLICNED 340
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 92/227 (40%), Gaps = 50/227 (22%)
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
G P+ +YN L+ A+C D + A + M ER + PDVDSY +I FC
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCR------- 237
Query: 167 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
KG +++ A +L +ML G PD L+
Sbjct: 238 ---------KG-------------------QVNGAMELLDDMLNKGFVPDRT----LIGG 265
Query: 227 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 286
C G F + +EMI KGF P F N L+ G C +VEEA +++ +
Sbjct: 266 LCDQGMFDEGKKYLEEMISKGFSPHFSVS--------NCLVKGFCSFGKVEEACDVVEVV 317
Query: 287 PEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDT 333
+ G + ++ ++ VI C E K +K+ ED + DT
Sbjct: 318 MKNGETLHSDTWEMVIPLICNEDESEK---IKLFLEDAVKEEITGDT 361
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
++ CR+G++ A ++L+ M KG F+ +RT +IG C+ D L EMI+KGF
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKG-FVPDRT---LIGGLCDQGMFDEGKKYLEEMISKGF 287
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 158
SP N LV +C V++A ++ + + G + D++ VI C
Sbjct: 288 SPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 337
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
G + +A ++ + + G+ + R+Y+ ++ FC + + A+ L +M+ + P V +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
L+ +CR+ V+ A+ +L M +G PD +I C +
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
KG P + + L++ C ++ EA D+ +++ G + T+ ++ C
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 337
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 139/354 (39%), Gaps = 20/354 (5%)
Query: 50 KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS 109
+R R ++ EA M+ G ++ ++ ++ + A + +M K F
Sbjct: 170 RRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFE 229
Query: 110 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 169
P + +Y L+ + + ++ + + R M + G PDV +Y +I+ C
Sbjct: 230 PDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRF 289
Query: 170 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 229
+ P + SL+ L E++L++A + F G + TY L+ A C
Sbjct: 290 FNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCW 349
Query: 230 VGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 289
A+ DEM K G P TY+ ++H L + R +EA E+ + M
Sbjct: 350 SQRMEDAYKTVDEMRLK--------GVGPNARTYDIILHHLIRMQRSKEAYEVYQT---M 398
Query: 290 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 349
P +Y ++ FC L A ++ E + K + + SL+ +L +E+
Sbjct: 399 SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGV-LPGMHMFSSLITALCHENKLDE 457
Query: 350 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 403
+Y E LD + G++ S + ++L G K K D L
Sbjct: 458 AC-EYFNE-------MLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRL 503
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 102/254 (40%), Gaps = 9/254 (3%)
Query: 64 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 123
+++ MK K L L + T++ + + K+ A +M GF +N ++
Sbjct: 150 LVDDMKAKKL-LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLS 208
Query: 124 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 183
+ +V A + M ++ PD+ SY ++ + D+G PD
Sbjct: 209 KSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVV 268
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
Y ++ A C ++ EA F EM + P + L+N + A
Sbjct: 269 AYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEF---- 324
Query: 244 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVIS 303
F +GF TYNAL+ C+ R+E+A + + M G+ PNA +Y ++
Sbjct: 325 ----FERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILH 380
Query: 304 GFCQIGELGKAYEL 317
++ +AYE+
Sbjct: 381 HLIRMQRSKEAYEV 394
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L L R R EA ++ + M C+ TY ++ FCN ++D A + EM KG
Sbjct: 379 LHHLIRMQRSKEAYEVYQTMSCEPTV---STYEIMVRMFCNKERLDMAIKIWDEMKGKGV 435
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRV 153
P + ++SL+ A C + +D+A M + G+ P ++R+
Sbjct: 436 LPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRL 480
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 117/251 (46%), Gaps = 10/251 (3%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK--GFSPS 111
R G++ +A +++ K + D ++++I +D A +L+EM A+ P
Sbjct: 549 RAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPD 608
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
++ +L+ A C V++A + + + + G+ + Y ++
Sbjct: 609 HISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYK 668
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+K + PD +S+L++ + L EAF + ++ G+ ++Y+ L+ ACC
Sbjct: 669 DMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAK 728
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
++ KA L++++ P I T NALI LC +++ +A+E L + +GL
Sbjct: 729 DWKKALELYEKIKS--------IKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGL 780
Query: 292 SPNAVSYSTVI 302
PN ++YS ++
Sbjct: 781 KPNTITYSMLM 791
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 141/327 (43%), Gaps = 16/327 (4%)
Query: 35 SDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKID 94
S+ S + +A+ RL R+GRI + +LE + + L ++ Y + C +
Sbjct: 396 SNGRSPETSDAYN---RLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAV 452
Query: 95 SAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI 154
+++I +P++ T+N L+ ++ A G+LR + E G++ D Y +I
Sbjct: 453 KEAFRFTKLI---LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLI 509
Query: 155 SKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVS 214
S + G+ + T+ +L++ ++++AF + + V
Sbjct: 510 SSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVK 569
Query: 215 PDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLD 274
PD + + L++AC G +AF + EM + D P ++ AL+ C
Sbjct: 570 PDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPID------PDHISIGALMKACCNAG 623
Query: 275 RVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTY 334
+VE A E+ + + + G+ Y+ ++ + G+ A + + ++K + DE +
Sbjct: 624 QVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTP-DEVFF 682
Query: 335 DSLMDSLSYE---DTYSSVMNDYLAEG 358
+L+D + D ++ D ++G
Sbjct: 683 SALIDVAGHAKMLDEAFGILQDAKSQG 709
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 89/205 (43%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K C G++ A+++ +++ G+ Y+ + D A ++ +M K
Sbjct: 616 MKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDV 675
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
+P V +++L+ +D+A GIL+ +G+ SY+ ++ C
Sbjct: 676 TPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALE 735
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ P +T ++L+ ALC +L +A + E+ G+ P+ +TY+ L+ A
Sbjct: 736 LYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASE 795
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFV 253
+F +F L + G P+ +
Sbjct: 796 RKDDFEVSFKLLSQAKGDGVSPNLI 820
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 1/161 (0%)
Query: 68 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 127
MK K + DE +S++I + +D A +L + ++G ++Y+SL+ A C
Sbjct: 670 MKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKD 729
Query: 128 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 187
KA+ + + L P + + N +I+ C G+ P+ TYS
Sbjct: 730 WKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSM 789
Query: 188 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
LM A + +F L + GVSP+ L R + + C
Sbjct: 790 LMLASERKDDFEVSFKLLSQAKGDGVSPN-LIMCRCITSLC 829
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 91/226 (40%), Gaps = 11/226 (4%)
Query: 68 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 127
M +G+ D +YS + C K A L EM ++ VV YN+++ A
Sbjct: 215 MDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQG 274
Query: 128 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 187
V+ + + R M ERG P+V ++N +I C +G PD+ TY
Sbjct: 275 VEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMC 334
Query: 188 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 247
L L ++ SE LF M+R GV P TY L+ G ++ M G
Sbjct: 335 LFSRL---EKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG 391
Query: 248 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
PD YNA+I L ++ A E M E GLSP
Sbjct: 392 DTPD--------SAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 108/278 (38%), Gaps = 27/278 (9%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLL--SEMIAKGFSPSVVTYNSLVF-AYCRRDSVDKAV 132
DE ++ +++ C + A L +I GFS S ++L+ + + K
Sbjct: 150 DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCK 209
Query: 133 GILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEAL 192
+ M G++ D+ SY+ + C + + D Y++++ A+
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 193 CVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDF 252
Q + +FREM G P+ T+ ++ C G A+ + DEM +G PD
Sbjct: 270 GASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS 329
Query: 253 VT------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
+T G P + TY L+ ++ L + + M E
Sbjct: 330 ITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKE 389
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAI 326
G +P++ +Y+ VI Q G L A E + E ++ +
Sbjct: 390 SGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 101/245 (41%), Gaps = 14/245 (5%)
Query: 17 NVNIYNGMIRGFATAA--GKSDSESKKVGEAFQS---------LKRLCREGRIPEAEQML 65
N I+N ++RG++ GK KK+ + + +C+ G+ +A ++
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 247
Query: 66 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
+ MK + + LD Y++VI ++ + EM +G P+V T+N+++ C
Sbjct: 248 KEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCED 307
Query: 126 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
+ A +L M +RG PD +Y + S+ + G+ P TY
Sbjct: 308 GRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTY 364
Query: 186 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
LM L +++ M G +PD Y +++A G A +EMI
Sbjct: 365 VMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIE 424
Query: 246 KGFLP 250
+G P
Sbjct: 425 RGLSP 429
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 84/210 (40%), Gaps = 28/210 (13%)
Query: 203 DLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVT 262
+ +++M GV+ D +Y+ ++ C G+ KA L+ EM + D +V
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLD--------VVA 261
Query: 263 YNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETE 322
YN +I + VE + + R M E G PN +++T+I C+ G + AY + E
Sbjct: 262 YNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMP 321
Query: 323 DKAIWWLDEDTYDSLMDSLSYE-------------------DTYSSVMNDYLAEGNMQRA 363
+ D TY L L DTY +M + G +Q
Sbjct: 322 KRGCQ-PDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPV 380
Query: 364 LQLDHDMSRDGYLSSYVAYSVLINGLHKKA 393
L + M G AY+ +I+ L +K
Sbjct: 381 LYVWKTMKESGDTPDSAAYNAVIDALIQKG 410
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 140/331 (42%), Gaps = 23/331 (6%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI---- 104
+K LC+ R A Q+ + M +G + D +Y ++ FC K++ A LL M
Sbjct: 159 MKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRIS 218
Query: 105 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX- 163
KG +V Y L+ A C VD A+ IL + +GL Y+ + +
Sbjct: 219 QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG 278
Query: 164 -XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 222
+ +G P +YS++ L E +L E ++ M G P Y
Sbjct: 279 IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGA 338
Query: 223 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 282
+ A C G+ +A + ++ + +G P + YN LI GLC + EA+
Sbjct: 339 KVKALCRAGKLKEAVSVINKEMMQGHC-------LPTVGVYNVLIKGLCDDGKSMEAVGY 391
Query: 283 LRGM-PEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL 341
L+ M ++ N +Y T++ G C+ G+ +A ++ E K+ + +TY ++ L
Sbjct: 392 LKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKS-HFPGVETYHMMIKGL 450
Query: 342 SYED-TYSSVM-------NDYLAEGNMQRAL 364
D Y +VM D + E ++ +AL
Sbjct: 451 CDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 12/262 (4%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIG--WFCNLNKIDSAHTLLSEMIAK 106
L LC G + +A ++L + KGL +R Y + W + I+ LL+E + +
Sbjct: 233 LDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIR 292
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
G P + +Y+++ + + +L AM +G P Y + C
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 167 XXXXXXXVDKG-IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG-GVSPDELTYTRLL 224
+ +G P Y+ L++ LC + + EA ++M + +E TY L+
Sbjct: 353 VSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLV 412
Query: 225 NACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 284
+ C G+F +A + +EM+ K P + TY+ +I GLC +DR EA+ L
Sbjct: 413 DGLCRDGQFLEASQVMEEMLIKSHFP--------GVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 285 GMPEMGLSPNAVSYSTVISGFC 306
M + P + + + C
Sbjct: 465 EMVSQDMVPESSVWKALAESVC 486
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 129/343 (37%), Gaps = 38/343 (11%)
Query: 188 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 247
LM+ LC R A +F+EM G PD +Y L+ CL G+ +A HL ++
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHL----LYSM 213
Query: 248 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQ 307
F G IV Y L+ LC V++A+EIL + GL Y + +G
Sbjct: 214 FWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH-- 271
Query: 308 IGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLD 367
+E E ++ L E + L D+YS++ D EG + ++
Sbjct: 272 -------WESSSEGIERVKRLLTETLIRGAIPCL---DSYSAMATDLFEEGKLVEGEEVL 321
Query: 368 HDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCS 427
M G+ + Y + L + + +EA + G +P+ VY++L+
Sbjct: 322 LAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGH-CLPTVGVYNVLI---- 376
Query: 428 NSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHN 487
+ L DD + K + Y L+ CR
Sbjct: 377 ----------------KGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQ 420
Query: 488 VHKAYNMYMEMVHYGHAPHMFSVLALISALDD-DRMYNEMSWV 529
+A + EM+ H P + + +I L D DR Y + W+
Sbjct: 421 FLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWL 463
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/442 (19%), Positives = 158/442 (35%), Gaps = 81/442 (18%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSA--------------- 96
L + R+ E + ++E MK + ++SVI F +++ A
Sbjct: 56 LGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNW 115
Query: 97 ----HTLLSEMIAKG-----------------FSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
TLL EM+ + + + N L+ C+ + D A +
Sbjct: 116 SLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVF 175
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV----DKGIFPDAATYSSLMEA 191
+ M +G PD DSY ++ FC KG D Y L++A
Sbjct: 176 QEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDA 235
Query: 192 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD-----EMIHK 246
LC + +A ++ ++LR G+ + Y + +A H E + +
Sbjct: 236 LCDAGEVDDAIEILGKILRKGLKAPKRCYHHI-----------EAGHWESSSEGIERVKR 284
Query: 247 GFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFC 306
+ G P + +Y+A+ L ++ E E+L M G P Y + C
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 307 QIGELGKAYELKIETEDKAIWWLDEDTYDSL----------MDSLSY------------- 343
+ G+L +A + + + Y+ L M+++ Y
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 344 EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 403
E+TY ++++ +G A Q+ +M + Y ++I GL R EA L
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 404 YIASDGFLSMPSYTVYDILLEN 425
+ S + P +V+ L E+
Sbjct: 465 EMVSQDMV--PESSVWKALAES 484
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 12/191 (6%)
Query: 91 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL-RAMAERGLSPDVDS 149
K+ +L M +KGF P+ Y + V A CR + +AV ++ + M + P V
Sbjct: 312 GKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGV 371
Query: 150 YNRVISKFCXXXXXXXXXXXXXXXVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREM 208
YN +I C + + TY +L++ LC + + EA + EM
Sbjct: 372 YNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
Query: 209 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 268
L P TY ++ C + +A +EM+ + +P+ + AL
Sbjct: 432 LIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPES--------SVWKALAE 483
Query: 269 GLCF--LDRVE 277
+CF +D VE
Sbjct: 484 SVCFCAIDVVE 494
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 140/331 (42%), Gaps = 23/331 (6%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI---- 104
+K LC+ R A Q+ + M +G + D +Y ++ FC K++ A LL M
Sbjct: 159 MKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRIS 218
Query: 105 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX- 163
KG +V Y L+ A C VD A+ IL + +GL Y+ + +
Sbjct: 219 QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG 278
Query: 164 -XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 222
+ +G P +YS++ L E +L E ++ M G P Y
Sbjct: 279 IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGA 338
Query: 223 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 282
+ A C G+ +A + ++ + +G P + YN LI GLC + EA+
Sbjct: 339 KVKALCRAGKLKEAVSVINKEMMQGHC-------LPTVGVYNVLIKGLCDDGKSMEAVGY 391
Query: 283 LRGM-PEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL 341
L+ M ++ N +Y T++ G C+ G+ +A ++ E K+ + +TY ++ L
Sbjct: 392 LKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKS-HFPGVETYHMMIKGL 450
Query: 342 SYED-TYSSVM-------NDYLAEGNMQRAL 364
D Y +VM D + E ++ +AL
Sbjct: 451 CDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 12/262 (4%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIG--WFCNLNKIDSAHTLLSEMIAK 106
L LC G + +A ++L + KGL +R Y + W + I+ LL+E + +
Sbjct: 233 LDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIR 292
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
G P + +Y+++ + + +L AM +G P Y + C
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 167 XXXXXXXVDKG-IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG-GVSPDELTYTRLL 224
+ +G P Y+ L++ LC + + EA ++M + +E TY L+
Sbjct: 353 VSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLV 412
Query: 225 NACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 284
+ C G+F +A + +EM+ K P + TY+ +I GLC +DR EA+ L
Sbjct: 413 DGLCRDGQFLEASQVMEEMLIKSHFP--------GVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 285 GMPEMGLSPNAVSYSTVISGFC 306
M + P + + + C
Sbjct: 465 EMVSQDMVPESSVWKALAESVC 486
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 129/343 (37%), Gaps = 38/343 (11%)
Query: 188 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 247
LM+ LC R A +F+EM G PD +Y L+ CL G+ +A HL ++
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHL----LYSM 213
Query: 248 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQ 307
F G IV Y L+ LC V++A+EIL + GL Y + +G
Sbjct: 214 FWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH-- 271
Query: 308 IGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLD 367
+E E ++ L E + L D+YS++ D EG + ++
Sbjct: 272 -------WESSSEGIERVKRLLTETLIRGAIPCL---DSYSAMATDLFEEGKLVEGEEVL 321
Query: 368 HDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCS 427
M G+ + Y + L + + +EA + G +P+ VY++L+
Sbjct: 322 LAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGH-CLPTVGVYNVLI---- 376
Query: 428 NSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHN 487
+ L DD + K + Y L+ CR
Sbjct: 377 ----------------KGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQ 420
Query: 488 VHKAYNMYMEMVHYGHAPHMFSVLALISALDD-DRMYNEMSWV 529
+A + EM+ H P + + +I L D DR Y + W+
Sbjct: 421 FLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWL 463
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/442 (19%), Positives = 158/442 (35%), Gaps = 81/442 (18%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSA--------------- 96
L + R+ E + ++E MK + ++SVI F +++ A
Sbjct: 56 LGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNW 115
Query: 97 ----HTLLSEMIAKG-----------------FSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
TLL EM+ + + + N L+ C+ + D A +
Sbjct: 116 SLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVF 175
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV----DKGIFPDAATYSSLMEA 191
+ M +G PD DSY ++ FC KG D Y L++A
Sbjct: 176 QEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDA 235
Query: 192 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD-----EMIHK 246
LC + +A ++ ++LR G+ + Y + +A H E + +
Sbjct: 236 LCDAGEVDDAIEILGKILRKGLKAPKRCYHHI-----------EAGHWESSSEGIERVKR 284
Query: 247 GFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFC 306
+ G P + +Y+A+ L ++ E E+L M G P Y + C
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 307 QIGELGKAYELKIETEDKAIWWLDEDTYDSL----------MDSLSY------------- 343
+ G+L +A + + + Y+ L M+++ Y
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 344 EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 403
E+TY ++++ +G A Q+ +M + Y ++I GL R EA L
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 404 YIASDGFLSMPSYTVYDILLEN 425
+ S + P +V+ L E+
Sbjct: 465 EMVSQDMV--PESSVWKALAES 484
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 12/191 (6%)
Query: 91 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL-RAMAERGLSPDVDS 149
K+ +L M +KGF P+ Y + V A CR + +AV ++ + M + P V
Sbjct: 312 GKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGV 371
Query: 150 YNRVISKFCXXXXXXXXXXXXXXXVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREM 208
YN +I C + + TY +L++ LC + + EA + EM
Sbjct: 372 YNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
Query: 209 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 268
L P TY ++ C + +A +EM+ + +P+ + AL
Sbjct: 432 LIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPES--------SVWKALAE 483
Query: 269 GLCF--LDRVE 277
+CF +D VE
Sbjct: 484 SVCFCAIDVVE 494
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 137/347 (39%), Gaps = 41/347 (11%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
T++++I + +++ A L SEM+ G VT+N+++ + +A +L+ M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
E+G+SPD +YN ++S G+FPD T+ +++ LC + +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA------FHLH------------ 240
+E + EM R + DE + ++ G +A F L
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVI 486
Query: 241 DEMIHKGFLPDFVTGFSPA---------IVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
D KG + T F ++ YN +I E+AL + +GM G
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
P+ +Y+++ + + +A + E LD TY++++
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEM-------LDSGCKPGC-------KTYAAMI 592
Query: 352 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
Y+ G + A+ L M + G + V Y LING + EA
Sbjct: 593 ASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEA 639
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 9/278 (3%)
Query: 60 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 119
+A + + MK +G + DE TY+S+ ++ +D A +L+EM+ G P TY +++
Sbjct: 533 KALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMI 592
Query: 120 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 179
+Y R + AV + AM + G+ P+ Y +I+ F + G+
Sbjct: 593 ASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQ 652
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
+ +SL++A L EA ++ +M PD +L+ C +G ++A +
Sbjct: 653 SNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESI 712
Query: 240 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYS 299
+ + KG V F+ + Y G+ LD EA+E+ M E GL + S++
Sbjct: 713 FNALREKGTCD--VISFATMMYLYK----GMGMLD---EAIEVAEEMRESGLLSDCTSFN 763
Query: 300 TVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSL 337
V++ + G+L + EL E + LD T+ +L
Sbjct: 764 QVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTL 801
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 147/372 (39%), Gaps = 55/372 (14%)
Query: 46 FQSLKRLC-REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI 104
F ++ C G + EAE +L+ M+ KG+ D +TY+ ++ + I++A ++
Sbjct: 343 FNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIR 402
Query: 105 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX 164
G P VT+ +++ C+R V + ++ M + D S ++ +
Sbjct: 403 KVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMY------- 455
Query: 165 XXXXXXXXXVDKGIFPDAATYSSLMEALCV--EQRLSEAFDLFRE---------MLRG-- 211
V++G+ A + CV L+ D++ E + G
Sbjct: 456 ---------VNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKR 506
Query: 212 ---GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 268
G D L Y ++ A KA L M ++G PD TYN+L
Sbjct: 507 NMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDE--------CTYNSLFQ 558
Query: 269 GLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWW 328
L +D V+EA IL M + G P +Y+ +I+ + ++G L A +L E +
Sbjct: 559 MLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGV-- 616
Query: 329 LDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 388
E Y S++N + G ++ A+Q M G S+++ + LI
Sbjct: 617 ------------KPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKA 664
Query: 389 LHKKARTREAKR 400
K EA+R
Sbjct: 665 YSKVGCLEEARR 676
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 159/431 (36%), Gaps = 67/431 (15%)
Query: 94 DSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRV 153
+ A +L M +G P TYNSL D VD+A IL M + G P +Y +
Sbjct: 532 EKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAM 591
Query: 154 ISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV 213
I+ + G+ P+ Y SL+ + EA FR M GV
Sbjct: 592 IASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGV 651
Query: 214 SPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFL 273
+ + T L+ A VG +A ++D+M PD + N+++ L
Sbjct: 652 QSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD--------VAASNSMLSLCADL 703
Query: 274 DRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDT 333
V EA I + E G + + +S++T++ + +G L +A E+ E + +
Sbjct: 704 GIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGL------- 755
Query: 334 YDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDM-SRDGYLSSYVAYSVLINGLHKK 392
LS +++ VM Y A+G + +L H+M L + + L L K
Sbjct: 756 -------LSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKG 808
Query: 393 ARTREAKRDLLYIASDG-FLSMPSYT--------VYDILLENCSNSEFKSLVELVKDYSM 443
EA L ++ L+ P+ T +Y LE+C
Sbjct: 809 GVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESC----------------- 851
Query: 444 RDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGH 503
+ T GE + YN +I+ + S ++ A YM M G
Sbjct: 852 -----------------QELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGL 894
Query: 504 APHMFSVLALI 514
P + + L+
Sbjct: 895 EPDIVTQAYLV 905
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 183 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 242
+T+++L++ RL++A +LF EML+ GV D +T+ +++ C G ++A L +
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 243 MIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVI 302
M KG PD TYN L+ +E ALE R + ++GL P+ V++ V+
Sbjct: 366 MEEKGISPD--------TKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVL 417
Query: 303 SGFCQ 307
CQ
Sbjct: 418 HILCQ 422
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 116/273 (42%), Gaps = 16/273 (5%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R G++ + ++ MK + L +++S++ + L +D A LL EM G P +V
Sbjct: 136 RNGKLELSRKVFNSMKDRNL----SSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIV 191
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
T+NSL+ Y + A+ +L+ M GL P S + ++
Sbjct: 192 TWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYI 251
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
+ ++ D ++L++ L A +F M + + L AC L
Sbjct: 252 LRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAE 311
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
+ E G P +T+N+L G L + E+AL+++ M E G++P
Sbjct: 312 ALMIRMEKE------------GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 294 NAVSYSTVISGFCQIGELGKAYELKIETEDKAI 326
N VS++ + SG + G A ++ I+ +++ +
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGV 392
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 125/296 (42%), Gaps = 27/296 (9%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R G +A ++ M+ G + T ++ N + ++ G +V
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
NSL+ Y R ++ + + +M +R LS S+N ++S +
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLS----SWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG-- 231
G+ PD T++SL+ + +A + + M G+ P + + LL A G
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241
Query: 232 EFTKAFH-----------------LHDEMIHKGFLPDFVTGF----SPAIVTYNALIHGL 270
+ KA H L D I G+LP F + IV +N+L+ GL
Sbjct: 242 KLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGL 301
Query: 271 CFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAI 326
+ +++A ++ M + G+ P+A++++++ SG+ +G+ KA ++ + ++K +
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGV 357
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C G++ EA++ L+ M +G R +I N ++SA ++S+M GF P +
Sbjct: 228 CSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDI 287
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
T+N L+ A + V+ + + + GL D+D+Y +I
Sbjct: 288 QTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNN 347
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
V+ G P + Y+ +++ +C +AF F +M P+ YT L+ C G+
Sbjct: 348 CVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGK 407
Query: 233 FTKAFHLHDEMIHKGFLP 250
F A + EM G +P
Sbjct: 408 FVDAANYLVEMTEMGLVP 425
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 101/262 (38%), Gaps = 8/262 (3%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
L LC A ++ M KGL D+RTY+ ++ +C+ K+ A L EM +GF
Sbjct: 189 LHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGF 248
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
+P + L+ ++ A ++ M + G PD+ ++N +I
Sbjct: 249 NPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIE 308
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
G+ D TY +L+ A+ ++ EAF L + G P Y ++ C
Sbjct: 309 MYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMC 368
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G F AF +M V P Y LI + +A L M E
Sbjct: 369 RNGMFDDAFSFFSDMK--------VKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTE 420
Query: 289 MGLSPNAVSYSTVISGFCQIGE 310
MGL P + + V G G+
Sbjct: 421 MGLVPISRCFDMVTDGLKNGGK 442
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
Y+SL+ ALC + A+ L R M+R G+ PD+ TY L+N C G+ +A DEM
Sbjct: 184 VYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEM 243
Query: 244 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVIS 303
+ GF+P + LI GL +E A E++ M + G P+ +++ +I
Sbjct: 244 SRR--------GFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIE 295
Query: 304 GFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 363
+ GE+ E+ T K +D DTY +L+ ++S G + A
Sbjct: 296 AISKSGEVEFCIEMYY-TACKLGLCVDIDTYKTLIPAVS-------------KIGKIDEA 341
Query: 364 LQLDHDMSRDGYLSSYVAYSVLINGL 389
+L ++ DG+ Y+ +I G+
Sbjct: 342 FRLLNNCVEDGHKPFPSLYAPIIKGM 367
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 9/251 (3%)
Query: 54 REGRIPEAEQMLE-VMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
+ G + +A ++ V K G Y+S++ C++ A+ L+ MI KG P
Sbjct: 158 KNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDK 217
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
TY LV +C + +A L M+ RG +P + +I
Sbjct: 218 RTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSK 277
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
G PD T++ L+EA+ + +++ + G+ D TY L+ A +G+
Sbjct: 278 MTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGK 337
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
+AF L + + G P F + ++P +I G+C ++A M
Sbjct: 338 IDEAFRLLNNCVEDGHKP-FPSLYAP-------IIKGMCRNGMFDDAFSFFSDMKVKAHP 389
Query: 293 PNAVSYSTVIS 303
PN Y+ +I+
Sbjct: 390 PNRPVYTMLIT 400
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 131/339 (38%), Gaps = 25/339 (7%)
Query: 91 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER-GLSPDVDS 149
K +S +L +M S T ++ Y + VD+AV + + + G VD
Sbjct: 125 KKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDV 184
Query: 150 YNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREML 209
YN ++ C + KG+ PD TY+ L+ C ++ EA + EM
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 210 RGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHG 269
R G +P L+ G A + +M GF+PD I T+N LI
Sbjct: 245 RRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPD--------IQTFNILIEA 296
Query: 270 LCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWL 329
+ VE +E+ ++GL + +Y T+I +IG++ +A+ L +
Sbjct: 297 ISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRL--------LNNC 348
Query: 330 DEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 389
ED + + Y+ ++ G A DM + + Y++LI
Sbjct: 349 VEDGHK------PFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMC 402
Query: 390 HKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSN 428
+ + +A L+ + G + P +D++ + N
Sbjct: 403 GRGGKFVDAANYLVEMTEMGLV--PISRCFDMVTDGLKN 439
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 102/259 (39%), Gaps = 38/259 (14%)
Query: 270 LCFL-------DRVEEALEILRGMPE-MGLSPNAVSYSTVISGFCQIGELGKAYELKIET 321
LCF+ V++A+E+ G+P+ +G Y++++ C + AY L
Sbjct: 149 LCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRM 208
Query: 322 EDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 381
K L D + TY+ ++N + + G M+ A + +MSR G+
Sbjct: 209 IRKG---LKPD-----------KRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARG 254
Query: 382 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNS-EFKSLVELVKD 440
+LI GL AK + + GF+ P ++IL+E S S E + +E+
Sbjct: 255 RDLLIEGLLNAGYLESAKEMVSKMTKGGFV--PDIQTFNILIEAISKSGEVEFCIEMYYT 312
Query: 441 YSMRDLSDDAATAHTTMLH-------------LKNKTDGENKTDGGMYNLLIFEHCRSHN 487
L D T T + L N + +K +Y +I CR+
Sbjct: 313 ACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGM 372
Query: 488 VHKAYNMYMEMVHYGHAPH 506
A++ + +M H P+
Sbjct: 373 FDDAFSFFSDMKVKAHPPN 391
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 17/286 (5%)
Query: 44 EAFQSLK-RLCREGRIPEAEQMLEVMKCKGLF-LDERTYSSVIGWFCNL-NKIDSAHTLL 100
EAFQ L LCR G I +AE+ + + K LF +D ++ ++ +CN+ + A +
Sbjct: 225 EAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIW 282
Query: 101 SEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXX 160
EM +P+ +Y+ ++ + + ++ ++ + M +RGL+P ++ YN ++
Sbjct: 283 REMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTRE 342
Query: 161 XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTY 220
++G+ PD+ TY+S++ LC +L A ++ M+ +SP T+
Sbjct: 343 DCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTF 402
Query: 221 TRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEAL 280
L A F K + +M ++ P T+ ++ L + E AL
Sbjct: 403 HAFLEAV----NFEKTLEVLGQMK--------ISDLGPTEETFLLILGKLFKGKQPENAL 450
Query: 281 EILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAI 326
+I M + N Y I G G L KA E+ E + K
Sbjct: 451 KIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 146/327 (44%), Gaps = 68/327 (20%)
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSP-DVDSYNRVISKFCXXXXXXXXX 167
+P + L+ A CR ++KA + +A + L P DV+ +N +++ +C
Sbjct: 221 TPYDEAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWC--------- 269
Query: 168 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
I+ D ++EA ++REM ++P++ +Y+ +++
Sbjct: 270 ---------NIWTD----------------VTEAKRIWREMGNYCITPNKDSYSHMISCF 304
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
VG + L+DEM +G +P I YN+L++ L D +EA+++++ +
Sbjct: 305 SKVGNLFDSLRLYDEMKKRGL--------APGIEVYNSLVYVLTREDCFDEAMKLMKKLN 356
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYEL--KIETEDKAIWWLDEDTYDSLMDSLSY-- 343
E GL P++V+Y+++I C+ G+L A + + +E+ + DT+ + ++++++
Sbjct: 357 EEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSP---TVDTFHAFLEAVNFEK 413
Query: 344 ----------------EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 387
E+T+ ++ + AL++ +M R +++ Y I
Sbjct: 414 TLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQ 473
Query: 388 GLHKKARTREAKRDLLYIASDGFLSMP 414
GL +A+ + S GF+ P
Sbjct: 474 GLLSCGWLEKAREIYSEMKSKGFVGNP 500
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 82/209 (39%), Gaps = 17/209 (8%)
Query: 41 KVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLL 100
KVG F SL+ + + MK +GL Y+S++ + D A L+
Sbjct: 306 KVGNLFDSLR-------------LYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLM 352
Query: 101 SEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXX 160
++ +G P VTYNS++ C +D A +L M LSP VD+++ F
Sbjct: 353 KKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFH----AFLEA 408
Query: 161 XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTY 220
+ P T+ ++ L ++ A ++ EM R + + Y
Sbjct: 409 VNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALY 468
Query: 221 TRLLNACCLVGEFTKAFHLHDEMIHKGFL 249
+ G KA ++ EM KGF+
Sbjct: 469 LATIQGLLSCGWLEKAREIYSEMKSKGFV 497
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 155/352 (44%), Gaps = 53/352 (15%)
Query: 35 SDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKID 94
S S +V + + LC+ G+I EA ++ + + + D T++ VI + L +
Sbjct: 39 SSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMR 94
Query: 95 SAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI 154
A L + ++ +VVT+ ++V Y R + A + + M ER +V S+N +I
Sbjct: 95 EARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMI 147
Query: 155 SKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVS 214
+ ++ I +++S+++AL R+ EA +LF M R
Sbjct: 148 DGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFERMPR---- 199
Query: 215 PDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLD 274
D +++T +++ G+ +A L D M + I+++NA+I G +
Sbjct: 200 RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERN------------IISWNAMITGYAQNN 247
Query: 275 RVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTY 334
R++EA ++ + MPE + S++T+I+GF + E+ KA L +K +
Sbjct: 248 RIDEADQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFDRMPEKNV-------- 295
Query: 335 DSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 386
++++++ Y+ + AL + M RDG + V V I
Sbjct: 296 ----------ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSI 337
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 156/358 (43%), Gaps = 53/358 (14%)
Query: 17 NVNIYNGMIRGFATAAGKSDS--------ESKKVGEAFQSLKRLCREGRIPEAEQMLEVM 68
NV +N MI G+A + G+ D + + +K L + GRI EA + E M
Sbjct: 139 NVVSWNTMIDGYAQS-GRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM 197
Query: 69 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 128
+ D ++++++ K+D A L M + +++++N+++ Y + + +
Sbjct: 198 PRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRI 249
Query: 129 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 188
D+A + + M ER D S+N +I+ F +K + +++++
Sbjct: 250 DEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEKNVI----SWTTM 301
Query: 189 MEALCVEQRLSEAFDLFREMLR-GGVSPDELTYTRLLNACC-----LVGE-----FTKAF 237
+ + EA ++F +MLR G V P+ TY +L+AC + G+ +K+
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSV 361
Query: 238 HLHDEMIHKGFL-------------PDFVTGF--SPAIVTYNALIHGLCFLDRVEEALEI 282
H +E++ L F G ++++N++I +EA+E+
Sbjct: 362 HQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEM 421
Query: 283 LRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE-LKIETEDKAIWWLDEDTYDSLMD 339
M + G P+AV+Y ++ G + K E K D+++ L E+ Y L+D
Sbjct: 422 YNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESL-PLREEHYTCLVD 478
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 41/221 (18%)
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
P L+ LC +++EA R++ G D +T+T ++ +G+ +A L
Sbjct: 44 PRVPQPEWLIGELCKVGKIAEA----RKLFDGLPERDVVTWTHVITGYIKLGDMREAREL 99
Query: 240 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYS 299
D + + +VT+ A++ G ++ A + + MPE N VS++
Sbjct: 100 FDRVDSR-----------KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWN 144
Query: 300 TVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGN 359
T+I G+ Q G + KA EL E ++ I +++S++ + G
Sbjct: 145 TMIDGYAQSGRIDKALELFDEMPERNI------------------VSWNSMVKALVQRGR 186
Query: 360 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKR 400
+ A+ L M R V+++ +++GL K + EA+R
Sbjct: 187 IDEAMNLFERMPR----RDVVSWTAMVDGLAKNGKVDEARR 223
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 131/319 (41%), Gaps = 67/319 (21%)
Query: 179 FPDAATY------SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
PD +T +S++ L +L LF +M R G+ PD +TY LL C V
Sbjct: 157 IPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKN 216
Query: 233 -FTKAFHLHDEMIHKGFLPDF---------------------------VTGFSPAIVTYN 264
+ KA L E+ H G D V G SP I Y+
Sbjct: 217 GYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYS 276
Query: 265 ALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
+L++ + ++A E++ M +GL PN V +T++ + + G ++ EL E E
Sbjct: 277 SLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELES- 335
Query: 325 AIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 384
A + +E Y LMD LS G ++ A + DM G S A S+
Sbjct: 336 AGYAENEMPYCMLMDGLS-------------KAGKLEEARSIFDDMKGKGVRSDGYANSI 382
Query: 385 LINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY---DILLEN------CSNSEFKSLV 435
+I+ L + R +EAK LS S T Y D+++ N C E +S++
Sbjct: 383 MISALCRSKRFKEAKE----------LSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVM 432
Query: 436 ELVKDYSMRDLSDDAATAH 454
++K + +S D T H
Sbjct: 433 RMMKKMDEQAVSPDYNTFH 451
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 9/243 (3%)
Query: 81 SSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR-RDSVDKAVGILRAMA 139
+S++ K+DS L +M G P VVTYN+L+ + ++ KA+ ++ +
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 140 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 199
G+ D Y V++ +G P+ YSSL+ + +
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 259
+A +L EM G+ P+++ T LL G F ++ L E+ G++
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELES--------AGYAEN 341
Query: 260 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKI 319
+ Y L+ GL ++EEA I M G+ + + S +IS C+ +A EL
Sbjct: 342 EMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSR 401
Query: 320 ETE 322
++E
Sbjct: 402 DSE 404
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 116/281 (41%), Gaps = 11/281 (3%)
Query: 59 PEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSL 118
P+A +++ + G+ +D Y +V+ + + + A + +M +G SP++ Y+SL
Sbjct: 219 PKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSL 278
Query: 119 VFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGI 178
+ +Y + KA ++ M GL P+ ++ + G
Sbjct: 279 LNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGY 338
Query: 179 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 238
+ Y LM+ L +L EA +F +M GV D + +++A C F +A
Sbjct: 339 AENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKE 398
Query: 239 LHDEMIHKGFLPDFVTGFSPA-IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVS 297
L D T + +V N ++ C +E + +++ M E +SP+ +
Sbjct: 399 LSR---------DSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNT 449
Query: 298 YSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLM 338
+ +I F + AY+ ++ K L+E+ SL+
Sbjct: 450 FHILIKYFIKEKLHLLAYQTTLDMHSKG-HRLEEELCSSLI 489
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 80/199 (40%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
GR EAE ++ MK +G + YSS++ + A L++EM + G P+ V
Sbjct: 251 GRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMM 310
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
+L+ Y + D++ +L + G + + Y ++
Sbjct: 311 TTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKG 370
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
KG+ D S ++ ALC +R EA +L R+ D + +L A C GE
Sbjct: 371 KGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMES 430
Query: 236 AFHLHDEMIHKGFLPDFVT 254
+ +M + PD+ T
Sbjct: 431 VMRMMKKMDEQAVSPDYNT 449
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 25/300 (8%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
D Y+ VI F + ++ A L+ EM G P V+TY S++ YC +D A +
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 136 RAMAERGLSPDVDSYNRVISKFCXX--XXXXXXXXXXXXXVDKG--IFPDAATYSSLMEA 191
+ M++ + +Y+R++ C D G I P+A TY+ +++A
Sbjct: 224 KEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQA 283
Query: 192 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF-HLHDEMIHKGFLP 250
C ++R+ EA + M G P+ +T L+ E KA L D+++ G +
Sbjct: 284 FCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGV- 342
Query: 251 DFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGE 310
FS A V+ L + R EEA +I R M G+ P+ ++ S V C +
Sbjct: 343 SLSECFSSATVS-------LIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLER 395
Query: 311 LGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDM 370
+ L E E K + + T DS D ++ ++ +GN A +L M
Sbjct: 396 YLDCFLLYQEIEKKDV----KSTIDS--------DIHAVLLLGLCQQGNSWEAAKLAKSM 443
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 117/296 (39%), Gaps = 46/296 (15%)
Query: 55 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 114
+G + A+ +++ M C GL+ D TY+S+I +CN KID A L EM + VT
Sbjct: 178 KGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVT 237
Query: 115 YNSLVFAYCRRDSVDKAVGILRAMAERG----LSPDVDSYNRVISKFCXXXXXXXXXXXX 170
Y+ ++ C+ +++A+ +L M + +SP+ +Y VI FC
Sbjct: 238 YSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVL 297
Query: 171 XXXVDKGIFPDAAT------------------------------------YSSLMEALCV 194
++G P+ T +SS +L
Sbjct: 298 DRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIR 357
Query: 195 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 254
+R EA +FR ML GV PD L + + CL+ + F L+ E+ K D +
Sbjct: 358 MKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKK----DVKS 413
Query: 255 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGE 310
I + L+ GLC EA ++ + M + + +I + G+
Sbjct: 414 TIDSDI--HAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGD 467
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 113/229 (49%), Gaps = 29/229 (12%)
Query: 250 PDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG 309
P+F V YN +I + A +++ M +GL P+ ++Y+++I+G+C G
Sbjct: 157 PEF--NVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAG 214
Query: 310 ELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHD 369
++ A+ L E +D +++S+ TYS ++ G+M+RAL+L +
Sbjct: 215 KIDDAWRLAKEM----------SKHDCVLNSV----TYSRILEGVCKSGDMERALELLAE 260
Query: 370 MSRD---GYLS-SYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN 425
M ++ G +S + V Y+++I +K R EA L + + G MP+ +L++
Sbjct: 261 MEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRG--CMPNRVTACVLIQG 318
Query: 426 C--SNSEFKSLVELVKDYSMR----DLSDDAATAHTTMLHLKNKTDGEN 468
++ + K+L +L+ D ++ LS+ ++A +++ +K + E
Sbjct: 319 VLENDEDVKALSKLI-DKLVKLGGVSLSECFSSATVSLIRMKRWEEAEK 366
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 99/255 (38%), Gaps = 33/255 (12%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K L EG + EA MK D Y+++I C + A LL +M GF
Sbjct: 172 MKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGF 231
Query: 109 --SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
P TY L+ +YCR G +A+ R + NR+ +
Sbjct: 232 RYPPDTYTYTILISSYCR---YGMQTGCRKAIRRR-----MWEANRMFREM--------- 274
Query: 167 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
+ +G PD TY+ L++ C R+ A +LF +M G P+++TY +
Sbjct: 275 -------LFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRY 327
Query: 227 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 286
+ E A + M G P TY LIH L R EA +++ M
Sbjct: 328 YSVTNEIEGAIEMMRTMKKLGH-------GVPGSSTYTPLIHALVETRRAAEARDLVVEM 380
Query: 287 PEMGLSPNAVSYSTV 301
E GL P +Y V
Sbjct: 381 VEAGLVPREYTYKLV 395
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 104/248 (41%), Gaps = 33/248 (13%)
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 241
A+ + LM+ L E + EA F M PD Y ++NA C VG F KA L D
Sbjct: 165 TASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLD 224
Query: 242 EMIHKGFLPDFVTGFSPAIVTYNALIHGLC-----------FLDRVEEALEILRGMPEMG 290
+M GF + P TY LI C R+ EA + R M G
Sbjct: 225 QMQLPGFR------YPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRG 278
Query: 291 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 350
P+ V+Y+ +I G C+ +G+A EL + + K + + TY+S
Sbjct: 279 FVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKG--------------CVPNQVTYNSF 324
Query: 351 MNDYLAEGNMQRALQLDHDMSRDGY-LSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 409
+ Y ++ A+++ M + G+ + Y+ LI+ L + R EA RDL+ +
Sbjct: 325 IRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEA-RDLVVEMVEA 383
Query: 410 FLSMPSYT 417
L YT
Sbjct: 384 GLVPREYT 391
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 21/151 (13%)
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV--SPDELTYTRLLNACCLVGEFT--- 234
PD Y++++ ALC +A L +M G PD TYT L+++ C G T
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 235 --------KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 286
+A + EM+ +GF+PD +VTYN LI G C +R+ ALE+ M
Sbjct: 258 KAIRRRMWEANRMFREMLFRGFVPD--------VVTYNCLIDGCCKTNRIGRALELFEDM 309
Query: 287 PEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
G PN V+Y++ I + E+ A E+
Sbjct: 310 KTKGCVPNQVTYNSFIRYYSVTNEIEGAIEM 340
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 37/177 (20%)
Query: 53 CREG---RIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS 109
CR+ R+ EA +M M +G D TY+ +I C N+I A L +M KG
Sbjct: 256 CRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCV 315
Query: 110 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 169
P+ VTYNS + Y + ++ A+ ++R M + G
Sbjct: 316 PNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG--------------------------- 348
Query: 170 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
G+ P ++TY+ L+ AL +R +EA DL EM+ G+ P E TY + +A
Sbjct: 349 ------HGV-PGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDA 398
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 152/356 (42%), Gaps = 40/356 (11%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
D SS+I + ++ +A + S++ + +V +N+++ Y D+A+ ++
Sbjct: 151 DAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGYANNSQADEALNLV 206
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 195
+ M G+ PDV ++N +IS F G PD +++S++ L
Sbjct: 207 KDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHN 266
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
+ +AFD F++ML G+ P+ T LL AC T A+ H + IH G+ VTG
Sbjct: 267 FQNEKAFDAFKQMLTHGLYPNSATIITLLPACT-----TLAYMKHGKEIH-GY--SVVTG 318
Query: 256 FSPAIVTYNALI--HGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGK 313
+AL+ +G C + EA+ + R P+ V+++++I + G K
Sbjct: 319 LEDHGFVRSALLDMYGKCGF--ISEAMILFRKTPK----KTTVTFNSMIFCYANHGLADK 372
Query: 314 AYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRAL-QLDHDMSR 372
A EL + E LD T+ +++ + S+ N +L N R + +L+H
Sbjct: 373 AVELFDQMEATG-EKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEH---- 427
Query: 373 DGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSN 428
Y+ +++ L + + EA Y P V+ LL C N
Sbjct: 428 ---------YACMVDLLGRAGKLVEA-----YEMIKAMRMEPDLFVWGALLAACRN 469
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 10/215 (4%)
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX-XXX 172
T+ L+ A CR VD A ++R M++ + D Y+R++S C
Sbjct: 181 TFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLE 240
Query: 173 XVDKGIF-PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ K F P Y+ +M L R E + +M V PD + YT +L
Sbjct: 241 DLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADE 300
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
++ KA L DE++ G PD + TYN I+GLC + +E AL+++ M ++G
Sbjct: 301 DYPKADKLFDELLLLGLAPD--------VYTYNVYINGLCKQNDIEGALKMMSSMNKLGS 352
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAI 326
PN V+Y+ +I + G+L +A L E E +
Sbjct: 353 EPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGV 387
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 105/254 (41%), Gaps = 11/254 (4%)
Query: 67 VMKCK-GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 125
V C+ G+ L+E T+ +I C + ++D A L+ M Y+ L+ + C+
Sbjct: 168 VKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKH 227
Query: 126 D--SVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 183
S +G L + + SP + Y V+ + PD
Sbjct: 228 KDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLV 287
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
Y+ +++ + ++ +A LF E+L G++PD TY +N C + A + M
Sbjct: 288 CYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSM 347
Query: 244 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVIS 303
G P +VTYN LI L + A + + M G++ N+ ++ +IS
Sbjct: 348 NK--------LGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMIS 399
Query: 304 GFCQIGELGKAYEL 317
+ ++ E+ A+ L
Sbjct: 400 AYIEVDEVVCAHGL 413
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 106/269 (39%), Gaps = 12/269 (4%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTL---LSEMIAKGF 108
LCR G + A +++ M + +D R YS ++ C +K S + L ++ F
Sbjct: 189 LCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCK-HKDSSCFDVIGYLEDLRKTRF 247
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
SP + Y ++ + V +L M + PD+ Y V+
Sbjct: 248 SPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADK 307
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ G+ PD TY+ + LC + + A + M + G P+ +TY L+ A
Sbjct: 308 LFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALV 367
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
G+ ++A L EM G + T++ +I +D V A +L
Sbjct: 368 KAGDLSRAKTLWKEM--------ETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFN 419
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYEL 317
M + + VIS C+ G + +A EL
Sbjct: 420 MNVFVKSSRIEEVISRLCEKGLMDQAVEL 448
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 22/224 (9%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
G+ + +T+ L++ALC + A +L R M + V D Y+RLL++ C + +
Sbjct: 174 GVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKD-SSC 232
Query: 237 FHLHDEMIHKGFLPDF-VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
F + G+L D T FSP + Y ++ L R +E + +L M + P+
Sbjct: 233 FDV------IGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDL 286
Query: 296 VSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYL 355
V Y+ V+ G + KA +L ++ + L D Y TY+ +N
Sbjct: 287 VCYTIVLQGVIADEDYPKADKL---FDELLLLGLAPDVY-----------TYNVYINGLC 332
Query: 356 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 399
+ +++ AL++ M++ G + V Y++LI L K AK
Sbjct: 333 KQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAK 376
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 19/248 (7%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEM--IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 136
T +++I C+ + A ++ + G SV Y SL+F + + +V +A +++
Sbjct: 175 TVTAIISALCSRGHVKRALGVMHHHKDVISGNELSV--YRSLLFGWSVQRNVKEARRVIQ 232
Query: 137 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD-------KGIFPDAATYSSLM 189
M G++PD+ +N +++ C ++ I P + +Y+ L+
Sbjct: 233 DMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILL 292
Query: 190 EALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFL 249
L +R+ E+ + +M R G PD +Y ++ L G F K + DEMI +GF
Sbjct: 293 SCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFR 352
Query: 250 PDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG 309
P+ F Y LI LC ++RV AL++ M + Y +I C+ G
Sbjct: 353 PE--RKF------YYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGG 404
Query: 310 ELGKAYEL 317
K EL
Sbjct: 405 NFEKGREL 412
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 129 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 188
+ A+GI + + + D + +IS C D + + Y SL
Sbjct: 155 EDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSL 214
Query: 189 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC-------LVGEFTKAFHLHD 241
+ V++ + EA + ++M G++PD + LL C G +A ++
Sbjct: 215 LFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIML 274
Query: 242 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTV 301
EM + + P ++YN L+ L RV E+ +IL M G P+ SY V
Sbjct: 275 EM--RSY------KIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFV 326
Query: 302 ISGFCQIGELGKAYEL 317
+ G GK ++
Sbjct: 327 VRVLYLTGRFGKGNQI 342
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 129/309 (41%), Gaps = 31/309 (10%)
Query: 16 LNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFL 75
+ V +YN I G G ++ EA +R+ R+ P E
Sbjct: 248 IGVTVYNAYIEGLMKRKGNTE-------EAIDVFQRMKRDRCKPTTE------------- 287
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
TY+ +I + +K + L EM + P++ TY +LV A+ R +KA I
Sbjct: 288 ---TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 344
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 195
+ E GL PDV YN ++ + G PD A+Y+ +++A
Sbjct: 345 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 404
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
S+A +F EM R G++P ++ LL+A + TK + EM G PD
Sbjct: 405 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD---- 460
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
N++++ L + + +IL M + + +Y+ +I+ + + G L +
Sbjct: 461 ----TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 516
Query: 316 ELKIETEDK 324
EL +E ++K
Sbjct: 517 ELFVELKEK 525
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 125/315 (39%), Gaps = 26/315 (8%)
Query: 77 ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS---VVTYNSLVFAYCRRD-SVDKAV 132
E TY+ +I +C I+ A +L EM SP V YN+ + +R + ++A+
Sbjct: 212 EDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAI 271
Query: 133 GILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEAL 192
+ + M P ++YN +I+ + P+ TY++L+ A
Sbjct: 272 DVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAF 331
Query: 193 CVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDF 252
E +A ++F ++ G+ PD Y L+ + G A + M H G PD
Sbjct: 332 AREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 391
Query: 253 VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELG 312
+YN ++ +A + M +G++P S+ ++S + + ++
Sbjct: 392 --------ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 443
Query: 313 KAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSR 372
K + E + + + DT+ +S++N Y G + ++ +M
Sbjct: 444 KCEAIVKEMSENGV---EPDTF-----------VLNSMLNLYGRLGQFTKMEKILAEMEN 489
Query: 373 DGYLSSYVAYSVLIN 387
+ Y++LIN
Sbjct: 490 GPCTADISTYNILIN 504
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 14/226 (6%)
Query: 90 LNKIDSAHTLLSEMIAK--GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDV 147
LNK + L+ E I + F P V+ +N L+ AY ++ +A + + E P
Sbjct: 153 LNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTE 212
Query: 148 DSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA---ATYSSLMEALCVEQ-RLSEAFD 203
D+Y +I +C + + P Y++ +E L + EA D
Sbjct: 213 DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAID 272
Query: 204 LFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTY 263
+F+ M R P TY ++N L G+ +K++ M K + P I TY
Sbjct: 273 VFQRMKRDRCKPTTETYNLMIN---LYGKASKSY-----MSWKLYCEMRSHQCKPNICTY 324
Query: 264 NALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG 309
AL++ E+A EI + E GL P+ Y+ ++ + + G
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 370
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 8/251 (3%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
REG +AE++ E ++ GL D Y++++ + A + S M G P
Sbjct: 333 REGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRA 392
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
+YN +V AY R A + M G++P + S+ ++S +
Sbjct: 393 SYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 452
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
+ G+ PD +S++ + ++ + EM G + D TY L+N G
Sbjct: 453 SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFL 512
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
+ L E+ K F PD +VT+ + I + LE+ M + G +P
Sbjct: 513 ERIEELFVELKEKNFRPD--------VVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAP 564
Query: 294 NAVSYSTVISG 304
+ + ++S
Sbjct: 565 DGGTAKVLLSA 575
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R G +AE + E MK G+ +++ ++ + + ++ EM G P
Sbjct: 403 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 462
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
NS++ Y R K IL M + D+ +YN +I+ +
Sbjct: 463 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
+K PD T++S + A ++ + ++F EM+ G +PD T LL+AC
Sbjct: 523 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSAC 576
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 21/207 (10%)
Query: 21 YNGMIRGFATAAGKSDSESKKVGEAFQSLKRL----------------CREGRIPEAEQM 64
YN M+ + A SD+E+ F+ +KRL + + + E +
Sbjct: 394 YNIMVDAYGRAGLHSDAEA-----VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAI 448
Query: 65 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 124
++ M G+ D +S++ + L + +L+EM + + TYN L+ Y +
Sbjct: 449 VKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGK 508
Query: 125 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 184
+++ + + E+ PDV ++ I + +D G PD T
Sbjct: 509 AGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 568
Query: 185 YSSLMEALCVEQRLSEAFDLFREMLRG 211
L+ A E+++ + + R M +G
Sbjct: 569 AKVLLSACSSEEQVEQVTSVLRTMHKG 595
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/434 (20%), Positives = 171/434 (39%), Gaps = 61/434 (14%)
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
PD ++ L++A + + EA L+ ++L P E TY L+ A C+ G +A +
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 240 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDR---VEEALEILRGMPEMGLSPNAV 296
EM + P + + YNA I GL + R EEA+++ + M P
Sbjct: 235 LVEMQNHHVSPKTI-----GVTVYNAYIEGL--MKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 297 SYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED----------- 345
+Y+ +I+ + + + +++L E + TY +L+++ + E
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQC-KPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 346 -----------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN-----GL 389
Y+++M Y G A ++ M G +Y+++++ GL
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 406
Query: 390 HKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVE-LVKDYSMRDLSD 448
H A + L IA P+ + +LL S + + E +VK+ S +
Sbjct: 407 HSDAEAVFEEMKRLGIA-------PTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP 459
Query: 449 DAATAHTTMLHLKNK--------------TDGENKTDGGMYNLLIFEHCRSHNVHKAYNM 494
D + +ML+L + +G D YN+LI + ++ + + +
Sbjct: 460 DTFVLN-SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEEL 518
Query: 495 YMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVT 554
++E+ P + + + I A ++Y + V + S D KVL +
Sbjct: 519 FVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSS 578
Query: 555 KSEIYALLDVLAEM 568
+ ++ + VL M
Sbjct: 579 EEQVEQVTSVLRTM 592
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 129/309 (41%), Gaps = 31/309 (10%)
Query: 16 LNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFL 75
+ V +YN I G G ++ EA +R+ R+ P E
Sbjct: 226 IGVTVYNAYIEGLMKRKGNTE-------EAIDVFQRMKRDRCKPTTE------------- 265
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
TY+ +I + +K + L EM + P++ TY +LV A+ R +KA I
Sbjct: 266 ---TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 322
Query: 136 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 195
+ E GL PDV YN ++ + G PD A+Y+ +++A
Sbjct: 323 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 382
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
S+A +F EM R G++P ++ LL+A + TK + EM G PD
Sbjct: 383 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD---- 438
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAY 315
N++++ L + + +IL M + + +Y+ +I+ + + G L +
Sbjct: 439 ----TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 494
Query: 316 ELKIETEDK 324
EL +E ++K
Sbjct: 495 ELFVELKEK 503
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 125/315 (39%), Gaps = 26/315 (8%)
Query: 77 ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS---VVTYNSLVFAYCRRD-SVDKAV 132
E TY+ +I +C I+ A +L EM SP V YN+ + +R + ++A+
Sbjct: 190 EDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAI 249
Query: 133 GILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEAL 192
+ + M P ++YN +I+ + P+ TY++L+ A
Sbjct: 250 DVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAF 309
Query: 193 CVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDF 252
E +A ++F ++ G+ PD Y L+ + G A + M H G PD
Sbjct: 310 AREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 369
Query: 253 VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELG 312
+YN ++ +A + M +G++P S+ ++S + + ++
Sbjct: 370 --------ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421
Query: 313 KAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSR 372
K + E + + + DT+ +S++N Y G + ++ +M
Sbjct: 422 KCEAIVKEMSENGV---EPDTF-----------VLNSMLNLYGRLGQFTKMEKILAEMEN 467
Query: 373 DGYLSSYVAYSVLIN 387
+ Y++LIN
Sbjct: 468 GPCTADISTYNILIN 482
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 14/226 (6%)
Query: 90 LNKIDSAHTLLSEMIAK--GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDV 147
LNK + L+ E I + F P V+ +N L+ AY ++ +A + + E P
Sbjct: 131 LNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTE 190
Query: 148 DSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA---ATYSSLMEALCVEQ-RLSEAFD 203
D+Y +I +C + + P Y++ +E L + EA D
Sbjct: 191 DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAID 250
Query: 204 LFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTY 263
+F+ M R P TY ++N L G+ +K++ M K + P I TY
Sbjct: 251 VFQRMKRDRCKPTTETYNLMIN---LYGKASKSY-----MSWKLYCEMRSHQCKPNICTY 302
Query: 264 NALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG 309
AL++ E+A EI + E GL P+ Y+ ++ + + G
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 8/251 (3%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
REG +AE++ E ++ GL D Y++++ + A + S M G P
Sbjct: 311 REGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRA 370
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
+YN +V AY R A + M G++P + S+ ++S +
Sbjct: 371 SYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 430
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
+ G+ PD +S++ + ++ + EM G + D TY L+N G
Sbjct: 431 SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFL 490
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
+ L E+ K F PD +VT+ + I + LE+ M + G +P
Sbjct: 491 ERIEELFVELKEKNFRPD--------VVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAP 542
Query: 294 NAVSYSTVISG 304
+ + ++S
Sbjct: 543 DGGTAKVLLSA 553
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R G +AE + E MK G+ +++ ++ + + ++ EM G P
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 440
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
NS++ Y R K IL M + D+ +YN +I+ +
Sbjct: 441 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
+K PD T++S + A ++ + ++F EM+ G +PD T LL+AC
Sbjct: 501 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSAC 554
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 21/207 (10%)
Query: 21 YNGMIRGFATAAGKSDSESKKVGEAFQSLKRL----------------CREGRIPEAEQM 64
YN M+ + A SD+E+ F+ +KRL + + + E +
Sbjct: 372 YNIMVDAYGRAGLHSDAEA-----VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAI 426
Query: 65 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 124
++ M G+ D +S++ + L + +L+EM + + TYN L+ Y +
Sbjct: 427 VKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGK 486
Query: 125 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 184
+++ + + E+ PDV ++ I + +D G PD T
Sbjct: 487 AGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 546
Query: 185 YSSLMEALCVEQRLSEAFDLFREMLRG 211
L+ A E+++ + + R M +G
Sbjct: 547 AKVLLSACSSEEQVEQVTSVLRTMHKG 573
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/434 (20%), Positives = 171/434 (39%), Gaps = 61/434 (14%)
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
PD ++ L++A + + EA L+ ++L P E TY L+ A C+ G +A +
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 240 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDR---VEEALEILRGMPEMGLSPNAV 296
EM + P + + YNA I GL + R EEA+++ + M P
Sbjct: 213 LVEMQNHHVSPKTI-----GVTVYNAYIEGL--MKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 297 SYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED----------- 345
+Y+ +I+ + + + +++L E + TY +L+++ + E
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQC-KPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 346 -----------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN-----GL 389
Y+++M Y G A ++ M G +Y+++++ GL
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 384
Query: 390 HKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVE-LVKDYSMRDLSD 448
H A + L IA P+ + +LL S + + E +VK+ S +
Sbjct: 385 HSDAEAVFEEMKRLGIA-------PTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP 437
Query: 449 DAATAHTTMLHLKNK--------------TDGENKTDGGMYNLLIFEHCRSHNVHKAYNM 494
D + +ML+L + +G D YN+LI + ++ + + +
Sbjct: 438 DTFVLN-SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEEL 496
Query: 495 YMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVT 554
++E+ P + + + I A ++Y + V + S D KVL +
Sbjct: 497 FVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSS 556
Query: 555 KSEIYALLDVLAEM 568
+ ++ + VL M
Sbjct: 557 EEQVEQVTSVLRTM 570
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 148/360 (41%), Gaps = 29/360 (8%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
T S+ G NL+ +D L+SEM G + T+ L+ Y + + K + + M
Sbjct: 194 TMLSIAGEARNLDMVDE---LVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKM 250
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
+ G D +YN +I C ++KGI TY L++ + +++
Sbjct: 251 RKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKV 310
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 258
+ +M+R + + LL + C+ G+ +A L E+ +K D
Sbjct: 311 DVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLD------- 363
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELK 318
+ L+ GLC +R+ +ALEI+ M L + V Y +ISG+ + ++ KA E +
Sbjct: 364 -AKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALE-Q 420
Query: 319 IETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 378
E K+ TY+ +M ++ L ++M +G
Sbjct: 421 FEVIKKS-------------GRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPD 467
Query: 379 YVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL-ENCSNSEFKSLVEL 437
VA + ++ G + R EA + + G P++ Y I + E C +S + ++++
Sbjct: 468 SVAITAVVAGHLGQNRVAEAWKVFSSMEEKGI--KPTWKSYSIFVKELCRSSRYDEIIKI 525
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 114/294 (38%), Gaps = 42/294 (14%)
Query: 68 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRD- 126
M+ +G + + T++ +I + + A EM G PS T+ L+ C +
Sbjct: 704 MRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKG 763
Query: 127 -SVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
+V++A R M G PD + + C G FP Y
Sbjct: 764 RNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIG-FPVTVAY 822
Query: 186 SSLMEALC----VEQRLSE--AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
S + ALC +E+ LSE +F+ R +L D+ TY +++ G+ KA
Sbjct: 823 SIYIRALCRIGKLEEALSELASFEGERSLL------DQYTYGSIVHGLLQRGDLQKALDK 876
Query: 240 HDEMIHKGFLP------DFVTGF---------------------SPAIVTYNALIHGLCF 272
+ M G P + F P++VTY A+I G
Sbjct: 877 VNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMS 936
Query: 273 LDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAI 326
L +VEEA R M E G SP+ +YS I+ CQ + A +L E DK I
Sbjct: 937 LGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGI 990
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 13/262 (4%)
Query: 52 LC-REGR-IPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS 109
LC ++GR + EA + M G D +G C + A + L + GF
Sbjct: 758 LCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF- 816
Query: 110 PSVVTYNSLVFAYCRRDSVDKAVGILRAM-AERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P V Y+ + A CR +++A+ L + ER L D +Y ++
Sbjct: 817 PVTVAYSIYIRALCRIGKLEEALSELASFEGERSL-LDQYTYGSIVHGLLQRGDLQKALD 875
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+ G P Y+SL+ E++L + + ++M P +TYT ++
Sbjct: 876 KVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYM 935
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
+G+ +A++ M +G PDF T Y+ I+ LC + E+AL++L M +
Sbjct: 936 SLGKVEEAWNAFRNMEERGTSPDFKT--------YSKFINCLCQACKSEDALKLLSEMLD 987
Query: 289 MGLSPNAVSYSTVISGFCQIGE 310
G++P+ +++ TV G + G+
Sbjct: 988 KGIAPSTINFRTVFYGLNREGK 1009
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 105/247 (42%), Gaps = 32/247 (12%)
Query: 175 DKGIFPDAATYSSLMEALCVEQ--RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
D G+ P ++T+ L+ LC ++ + EA FREM+R G PD L C VG
Sbjct: 741 DMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGN 800
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
A D + GF P V Y+ I LC + ++EEAL L
Sbjct: 801 TKDAKSCLDSLGKIGF---------PVTVAYSIYIRALCRIGKLEEALSELASFEGERSL 851
Query: 293 PNAVSYSTVISGFCQIGELGKAYEL-----KIETEDKA-------IWWLDEDTYDSLMDS 340
+ +Y +++ G Q G+L KA + +I T+ +++ E + ++++
Sbjct: 852 LDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLET 911
Query: 341 LSYED---------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 391
+ TY++++ Y++ G ++ A +M G + YS IN L +
Sbjct: 912 CQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQ 971
Query: 392 KARTREA 398
++ +A
Sbjct: 972 ACKSEDA 978
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 103/278 (37%), Gaps = 42/278 (15%)
Query: 64 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 123
+ E M+ G LD Y+ +I C + D A EM+ KG + + TY L+
Sbjct: 246 VFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIA 305
Query: 124 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 183
+ + VD I M + D++ ++ FC +K + DA
Sbjct: 306 KSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAK 365
Query: 184 TYSSLMEALCVEQRL----------------------------------SEAFDLFREML 209
+ L++ LC R+ S+A + F +
Sbjct: 366 YFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIK 425
Query: 210 RGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHG 269
+ G P TYT ++ + +F K +L +EMI G PD V A++ G
Sbjct: 426 KSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDS--------VAITAVVAG 477
Query: 270 LCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQ 307
+RV EA ++ M E G+ P SYS + C+
Sbjct: 478 HLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCR 515
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 127/326 (38%), Gaps = 28/326 (8%)
Query: 28 FATAAGKSDSESKKVGEAFQSLKRLCREGR-IPEAEQMLEVMKCKGLFLDERTYSSVIGW 86
F + D S +VG + ++ + E R + ++++ M+ G D RT++ +I
Sbjct: 175 FFNWVKQKDGFSHRVG-IYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISV 233
Query: 87 FCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPD 146
+ KI + +M GF YN ++ + C D A+ + M E+G++
Sbjct: 234 YGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFG 293
Query: 147 VDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFR 206
+ +Y ++ V + + L+++ CV ++ EA +L R
Sbjct: 294 LRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIR 353
Query: 207 EMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM-------------IHKGFLPD-- 251
E+ + D + L+ C A + D M I G+L
Sbjct: 354 ELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQND 413
Query: 252 -----------FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
+G P + TY ++ L L + E+ + M E G+ P++V+ +
Sbjct: 414 VSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITA 473
Query: 301 VISGFCQIGELGKAYELKIETEDKAI 326
V++G + +A+++ E+K I
Sbjct: 474 VVAGHLGQNRVAEAWKVFSSMEEKGI 499
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 118/265 (44%), Gaps = 19/265 (7%)
Query: 95 SAHTLLSEMIAKGFSPSVVTY-------NSLVFAYCRRDSVDKAVGILRAMAERGLSPDV 147
+A + +++ +G P+ ++Y N L+ A +R V +L M ++GL P
Sbjct: 399 AALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQR 458
Query: 148 DSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFRE 207
+N V+ VD G P +Y +L+ AL + EAF ++
Sbjct: 459 RHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNH 518
Query: 208 MLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALI 267
M++ G+ P+ YT + A L G+ + F+L D ++ + G P++VT+NA+I
Sbjct: 519 MIKVGIEPNLYAYTTM--ASVLTGQ--QKFNLLDTLLKEM----ASKGIEPSVVTFNAVI 570
Query: 268 HGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIW 327
G A E M + PN ++Y +I + AYEL ++ +++ +
Sbjct: 571 SGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGL- 629
Query: 328 WLDEDTYDSLMDSLSYEDTYSSVMN 352
L YD+++ S +TY + ++
Sbjct: 630 KLSSKPYDAVVKS---AETYGATID 651
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 2/187 (1%)
Query: 63 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 122
++L M+ KGL R +++V+ ++ +A + M+ G P+V++Y +L+ A
Sbjct: 444 RLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSAL 503
Query: 123 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 182
+ D+A + M + G+ P++ +Y + S KGI P
Sbjct: 504 EKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSV 563
Query: 183 ATYSSLMEALCVEQRLSE-AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 241
T+++++ C LS A++ F M V P+E+TY L+ A + A+ LH
Sbjct: 564 VTFNAVISG-CARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHV 622
Query: 242 EMIHKGF 248
+ ++G
Sbjct: 623 KAQNEGL 629
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 8/206 (3%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
+Y+++I C + + A LL E+ KG P +VT+N+L+ + + + I M
Sbjct: 182 SYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKM 241
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
E+ ++ D+ +YN + G+ PD ++++++ E ++
Sbjct: 242 VEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKM 301
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 258
EA ++E+++ G PD+ T+ LL A C G+F A L E K +L
Sbjct: 302 DEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL--------V 353
Query: 259 AIVTYNALIHGLCFLDRVEEALEILR 284
T L+ L + EEA EI++
Sbjct: 354 GQTTLQQLVDELVKGSKREEAEEIVK 379
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 150/367 (40%), Gaps = 56/367 (15%)
Query: 47 QSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 106
++++RL R+ E++LE K E + +I + ++A + EM +
Sbjct: 79 RTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNR 138
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
SV+++N+L+ AY + K ++ + +N + K
Sbjct: 139 DCKRSVLSFNALLSAY----RLSKKFDVVEEL-----------FNELPGKL--------- 174
Query: 167 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
I PD +Y++L++ALC + L EA L E+ G+ PD +T+ LL +
Sbjct: 175 ----------SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS 224
Query: 227 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 286
L G+F + +M+ K D I TYNA + GL + +E + + +
Sbjct: 225 SYLKGQFELGEEIWAKMVEKNVAID--------IRTYNARLLGLANEAKSKELVNLFGEL 276
Query: 287 PEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDT 346
GL P+ S++ +I G G++ D+A W E + T
Sbjct: 277 KASGLKPDVFSFNAMIRGSINEGKM-----------DEAEAWYKEIVKHGYRPDKA---T 322
Query: 347 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 406
++ ++ G+ + A++L + YL L++ L K ++ EA+ +
Sbjct: 323 FALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAK 382
Query: 407 SDGFLSM 413
++ FL +
Sbjct: 383 TNDFLKL 389
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 122/283 (43%), Gaps = 19/283 (6%)
Query: 71 KGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV-D 129
+G + Y ++I + + TL+ E+IA SV YN ++ C R + +
Sbjct: 102 RGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFN 161
Query: 130 KAVGILRAMAERGLS-PDVDSYNRVISKFCXXXXXXXXXXXXXXXV--------DKGIFP 180
+A + M S PD+++Y ++S V G+ P
Sbjct: 162 RAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIP 221
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
D + +++A + EA +F+EM G P+ TY+ L+ C G + +
Sbjct: 222 DTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFY 281
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
EM KG +P+ Y LI L R++EA+E++ M LSP+ ++Y+T
Sbjct: 282 KEMQVKGMVPNG--------SCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 301 VISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSY 343
V++ C+ G +A E+ +E K + E Y +LMD + +
Sbjct: 334 VLTELCRGGRGSEALEM-VEEWKKRDPVMGERNYRTLMDEVYF 375
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 35/175 (20%)
Query: 68 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 127
MK G+ D + +I + ++D A + EM G P+ TY+ LV C +
Sbjct: 214 MKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGR 273
Query: 128 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 187
V + +G + M +G+ P+ + Y
Sbjct: 274 VGQGLGFYKEMQVKGM-----------------------------------VPNGSCYMV 298
Query: 188 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 242
L+ +L +E+RL EA ++ +ML +SPD LTY +L C G ++A + +E
Sbjct: 299 LICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 179/465 (38%), Gaps = 84/465 (18%)
Query: 21 YNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIP-------------------EA 61
YN MI + +S ++ EA ++ KR+ EG +P E
Sbjct: 301 YNTMIDTYG--------KSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEV 352
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
+++ MK D RTY+ +I N I+ A EM G P V+Y +L++A
Sbjct: 353 TSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYA 411
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNR-VISKFCXXXXXXXXXXXXXXXVDKGIFP 180
+ R V++A G++ M + + ++D Y + +++
Sbjct: 412 FSIRHMVEEAEGLIAEMDDDNV--EIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNM 469
Query: 181 DAATYSSLMEALCVEQRLSEAFDLF---REMLRGGVSPDELTYTRLLNACCLVGEFTKAF 237
+ YS+ ++A LSEA +F +E+ + V + Y ++ A + KA
Sbjct: 470 SSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTV----IEYNVMIKAYGISKSCEKAC 525
Query: 238 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVS 297
L + M+ G PD TYN L+ L D + L M E G + +
Sbjct: 526 ELFESMMSYGVTPD--------KCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIP 577
Query: 298 YSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYL 355
Y VIS F ++G+L A E+ Y +++ D Y ++N +
Sbjct: 578 YCAVISSFVKLGQLNMA----------------EEVYKEMVEYNIEPDVVVYGVLINAFA 621
Query: 356 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPS 415
GN+Q+A+ M G + V Y+ LI K EA+
Sbjct: 622 DTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAE---------------- 665
Query: 416 YTVYDILLENCSNSEFKSLVE---LVKDYSMRDLSDDAATAHTTM 457
+Y LL++C+ +++ + ++ YS R + A +M
Sbjct: 666 -AIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSM 709
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 14/266 (5%)
Query: 65 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 124
LE M+ G D Y +VI F L +++ A + EM+ P VV Y L+ A+
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 125 RDSVDKAVGILRAMAERGLSPDVDSYNRVI---SKFCXXXXXXXXXXXXXXXVDKGIFPD 181
+V +A+ + AM E G+ + YN +I +K +K +PD
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPD 682
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 241
T + ++ + +A +F M + G +E T+ +L G F +A +
Sbjct: 683 VYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAK 741
Query: 242 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLD-RVEEALEILRGMPEMGLSPNAVSYST 300
+M L D ++YN+++ GL LD R +EA+E + M G+ P+ ++ +
Sbjct: 742 QMREMKILTD--------PLSYNSVL-GLFALDGRFKEAVETFKEMVSSGIQPDDSTFKS 792
Query: 301 VISGFCQIGELGKAYELKIETEDKAI 326
+ + ++G KA E K I
Sbjct: 793 LGTILMKLGMSKKAVRKIEEIRKKEI 818
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 201/502 (40%), Gaps = 71/502 (14%)
Query: 61 AEQMLEVMKCKGLF-LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 119
A ++ E K KG + L+ Y+ ++ K +L EMI KG P TY +L+
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 120 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVIS------KFCXXXXXXXXXXXXXXX 173
Y + A+ L M++ G+ PD + V+ +F
Sbjct: 230 DVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENK 289
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
D + + TY+++++ ++ EA + F+ ML G+ P +T+ +++ G+
Sbjct: 290 ADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQL 349
Query: 234 TKAFHLHDEM-IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
+ L M +H +P TYN LI + +E A + M + GL
Sbjct: 350 GEVTSLMKTMKLH----------CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLK 399
Query: 293 PNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSL----MDSLSYEDTYS 348
P+ VSY T++ F + +A L E +D + +DE T +L +++ E ++S
Sbjct: 400 PDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNV-EIDEYTQSALTRMYVEAEMLEKSWS 458
Query: 349 SVMNDYLAEGNMQR---ALQLDHDMSRDGYLS---------------SYVAYSVLIN--G 388
++A GNM + +D R GYLS + + Y+V+I G
Sbjct: 459 WFKRFHVA-GNMSSEGYSANIDAYGER-GYLSEAERVFICCQEVNKRTVIEYNVMIKAYG 516
Query: 389 LHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSD 448
+ K A + F SM SY V + C+ + +LV+++ M
Sbjct: 517 ISKSCEK----------ACELFESMMSYGVTP---DKCT---YNTLVQILASADM----- 555
Query: 449 DAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMF 508
H +L+ + +D Y +I + ++ A +Y EMV Y P +
Sbjct: 556 ----PHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVV 611
Query: 509 SVLALISAL-DDDRMYNEMSWV 529
LI+A D + MS+V
Sbjct: 612 VYGVLINAFADTGNVQQAMSYV 633
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 125/285 (43%), Gaps = 14/285 (4%)
Query: 60 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 119
E ++L M+ +G+ DE T++ ++ + + S+ LS MI+KG P+ + ++
Sbjct: 927 EVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVT 986
Query: 120 FAYCRRDSVDKAVGILRAMAERG--LSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG 177
+ C V KA+ + + M +G L V +++ G
Sbjct: 987 SSLCDNGDVKKALDLWQVMESKGWNLGSSV-VQTKIVETLISKGEIPKAEDFLTRVTRNG 1045
Query: 178 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 237
+ A Y ++++ L L A L ML+ P +Y ++N + KA
Sbjct: 1046 MM--APNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAM 1103
Query: 238 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVS 297
H EM+ G SP+I T++ L+H C +V E+ +++ M +G SP+
Sbjct: 1104 DFHTEMVE--------LGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEM 1155
Query: 298 YSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS 342
+ TVI F KA E+ +E K + +D +T+ SL+ ++S
Sbjct: 1156 FKTVIDRFRVEKNTVKASEM-MEMMQKCGYEVDFETHWSLISNMS 1199
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 134/379 (35%), Gaps = 58/379 (15%)
Query: 61 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 120
A +++ ++ +G +++ Y+ +I C K +A +L EM+ K PS+ + L+
Sbjct: 723 AHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIP 782
Query: 121 AYCRRDSVDKAVGI-----------------------------LRAMAERGLSPDVDSYN 151
CR + A + LR M GLS YN
Sbjct: 783 RLCRANKAGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYN 842
Query: 152 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 211
+ +C V K I +Y + +C+E + A L +L G
Sbjct: 843 VMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLG 902
Query: 212 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 271
+P + +L + F HL ++K L G P T+N L+HG
Sbjct: 903 ESNPGGVIIYNML----IFYMFRAKNHLE---VNKVLLEMQGRGVLPDETTFNFLVHGYS 955
Query: 272 FLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLD- 330
+L L M G+ PN S V S C G++ KA +L E K W L
Sbjct: 956 SSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKG-WNLGS 1014
Query: 331 --------------------EDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDM 370
ED + + Y +++ GN+ A+ L + M
Sbjct: 1015 SVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTM 1074
Query: 371 SRDGYLSSYVAYSVLINGL 389
++ + +Y +INGL
Sbjct: 1075 LKNQSIPGSSSYDSVINGL 1093
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 127/552 (23%), Positives = 205/552 (37%), Gaps = 94/552 (17%)
Query: 10 AALKMALNVNIYNGMIRGFATAAGKSD-----SESKKVGEAF---QSLKRLCREGRIPEA 61
AL LN +IY+ + G+ D E K + F + L LCR A
Sbjct: 283 VALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVKYEPDVFVGNRILHSLCRRFGSERA 342
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
+E ++ G DE T+ +IGW C I A LSE+++KG+ P V +YN+++
Sbjct: 343 YVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSG 402
Query: 122 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 181
R+ IL M E G+ + ++ +++ +C K I
Sbjct: 403 LFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEA---------KRIVNK 453
Query: 182 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF----TKAF 237
Y L+EA VE LSEAF L G P + R ++ EF
Sbjct: 454 MFGY-GLIEASKVEDPLSEAFSLV------GFDPLAVRLKRDNDSTFSKAEFFDDLGNGL 506
Query: 238 HLHDEM----------IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
+LH ++ + + LP+F N+LI ++ AL +L M
Sbjct: 507 YLHTDLDAYEQRVNMVLDRSVLPEF-----------NSLIVRASEDGDLQTALRLLDEMA 555
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 347
G + S++ ++ C + +E K + LD +T + L
Sbjct: 556 RWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFL---------- 605
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI-- 405
+ +Y +G + + + H M + + V Y+ LI KK E DLL +
Sbjct: 606 ---VQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKK----ETLNDLLNVWG 658
Query: 406 ASDGFLSMPSYT----VYDILLENCSNSEFKSLVELVKDYSMRDLSDDAA---------- 451
A+ +P +++ L+ E L E V + LS A
Sbjct: 659 AAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERV--FISYPLSQSEACRIFVEKLTV 716
Query: 452 -----TAHTTMLHLKNKTDGEN-KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 505
AH+ + L +GE + +YN LI C A+ + EM+ H P
Sbjct: 717 LGFSCIAHSVVKRL----EGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIP 772
Query: 506 HMFSVLALISAL 517
+ S L LI L
Sbjct: 773 SLGSCLMLIPRL 784
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L +G IP+AE L + G+ Y ++I + +D A LL+ M+ P
Sbjct: 1025 LISKGEIPKAEDFLTRVTRNGMMAP--NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPG 1082
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+Y+S++ R + +DKA+ M E GLSP + +++ ++ KFC
Sbjct: 1083 SSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIK 1142
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
V G P + ++++ VE+ +A ++ M + G D T+ L++
Sbjct: 1143 SMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLIS 1196
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K+L G + A +L M +Y SVI N++D A +EM+ G
Sbjct: 1055 IKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGL 1114
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKF 157
SPS+ T++ LV +C V ++ ++++M G SP + + VI +F
Sbjct: 1115 SPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRF 1163
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 134/355 (37%), Gaps = 64/355 (18%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSV-IGWFCNLNKIDSAHTLLSEMIAKGFSP 110
LC + ++ EA + + G L+ YS + IG+ N+ LLS + + P
Sbjct: 266 LCLDQKVQEARVLARKLVALGCILNSSIYSKITIGY----NEKQDFEDLLSFIGEVKYEP 321
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
V N ++ + CRR ++A + + G
Sbjct: 322 DVFVGNRILHSLCRRFGSERAYVYMEELEHLGFK-------------------------- 355
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
D T+ L+ C E + A E++ G PD +Y +L+
Sbjct: 356 ---------QDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRK 406
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
G + + DEM G + ++ T+ ++ G C + EEA I+ M G
Sbjct: 407 GLWQHTHCILDEMKENGMM--------LSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYG 458
Query: 291 LSPNAVSYSTVISGFCQIGELGKAYELKIE---TEDKAIWW----------LDEDTYDSL 337
L + + F +G A LK + T KA ++ D D Y+
Sbjct: 459 LIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFDDLGNGLYLHTDLDAYEQR 518
Query: 338 MDSL---SYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 389
++ + S ++S++ +G++Q AL+L +M+R G S +++VL+ L
Sbjct: 519 VNMVLDRSVLPEFNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSL 573
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 74/176 (42%), Gaps = 2/176 (1%)
Query: 142 GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEA 201
GL D +S V+ K C ++ IFPD L+ C+ ++L EA
Sbjct: 206 GLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANE-IFPDENICDLLISGWCIAEKLDEA 264
Query: 202 FDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIV 261
L EM RGG Y +L+ C + F L E + K L G
Sbjct: 265 TRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPE-VEKVLLEMEFRGVPRNTE 323
Query: 262 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
T+N LI+ LC + R EEA+ + M E G P+A +Y +I Q +G+ E+
Sbjct: 324 TFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEM 379
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 110/278 (39%), Gaps = 35/278 (12%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K+LC +G AE+M++ +F DE +I +C K+D A L EM GF
Sbjct: 218 VKKLCEKGHASIAEKMVKNT-ANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGF 276
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
YN ++ C+ + R L P+V+ +V+ +
Sbjct: 277 EIGTKAYNMMLDCVCK---------LCRKKDPFKLQPEVE---KVLLEMEF--------- 315
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+G+ + T++ L+ LC +R EA LF M G PD TY L+ +
Sbjct: 316 -------RGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLY 368
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
+ + D+M G+ G Y + LC ++R+E A+ + + M
Sbjct: 369 QAARIGEGDEMIDKMKSAGY------GELLNKKEYYGFLKILCGIERLEHAMSVFKSMKA 422
Query: 289 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAI 326
G P +Y ++ C +L +A L E K I
Sbjct: 423 NGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGI 460
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGL--FLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 106
++ L + RI E ++M++ MK G L+++ Y + C + +++ A ++ M A
Sbjct: 364 IRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKAN 423
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKF 157
G P + TY+ L+ C + + +A G+ + A++G++ Y RV +F
Sbjct: 424 GCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEY-RVDPRF 473
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 128 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 187
+++A+ IL M + G P S+N +++ G+ DA +
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 188 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 247
L++ LC L A L E + P+ +T++ L+ C G+F +AF L + M +
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 248 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
PD +T+N LI GL RVEE +++L M G PN +Y V+ G
Sbjct: 268 IEPD--------TITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL 317
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 8/248 (3%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
GRI A ++L M G + ++++ ++ + D H + G
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
N L+ C +++ A+ +L ++ P+V +++ +I FC
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
+ I PD T++ L+ L + R+ E DL M G P+ TY +L +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 236 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
A + +MI G P F ++Y ++ GLC V E +LR M G P
Sbjct: 326 AKEMMSQMISWGMRPSF--------LSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKT 377
Query: 296 VSYSTVIS 303
+ + V+
Sbjct: 378 LMWWKVVQ 385
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 30/262 (11%)
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 256
R++ A ++ M G P ++ +LN + L DE IHK F+ G
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLV-------SAKLFDE-IHKIFVSAPKLGV 198
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
N LI GLC +E AL++L P+ PN +++S +I GFC G+ +A++
Sbjct: 199 EIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFK 258
Query: 317 LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 376
L E + I + DT T++ +++ +G ++ + L M G
Sbjct: 259 LLERMEKERI---EPDTI-----------TFNILISGLRKKGRVEEGIDLLERMKVKGCE 304
Query: 377 SSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY-DILLENCSNSEFKSLV 435
+ Y ++ GL K R EAK + + S G PS+ Y ++L C E KS+V
Sbjct: 305 PNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGM--RPSFLSYKKMVLGLC---ETKSVV 359
Query: 436 ELVKDYSMRDLSDDAATAHTTM 457
E+ D+ +R + + T M
Sbjct: 360 EM--DWVLRQMVNHGFVPKTLM 379
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 27/158 (17%)
Query: 17 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCRE-------------------GR 57
NV ++ +IRGF K EAF+ L+R+ +E GR
Sbjct: 236 NVMTFSPLIRGFCNKG--------KFEEAFKLLERMEKERIEPDTITFNILISGLRKKGR 287
Query: 58 IPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNS 117
+ E +LE MK KG + TY V+ + + A ++S+MI+ G PS ++Y
Sbjct: 288 VEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKK 347
Query: 118 LVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVIS 155
+V C SV + +LR M G P + +V+
Sbjct: 348 MVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 11/268 (4%)
Query: 51 RLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 110
R R+ ++ E E LE++K G+ LD TYS++I N + A M G P
Sbjct: 197 RFGRQFQLIE-EMALEMVK-DGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMP 254
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
VTY++++ Y + V++ + + G PD +++ + F
Sbjct: 255 DEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVL 314
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
+ P+ Y++L+EA+ + A LF EML G++P+E T T L+
Sbjct: 315 QEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKA 374
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE-M 289
A L +EM K + DF + YN L++ + EEA + M E +
Sbjct: 375 RWARDALQLWEEMKAKKWPMDF--------ILYNTLLNMCADIGLEEEAERLFNDMKESV 426
Query: 290 GLSPNAVSYSTVISGFCQIGELGKAYEL 317
P+ SY+ +++ + G+ KA EL
Sbjct: 427 QCRPDNFSYTAMLNIYGSGGKAEKAMEL 454
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 105/255 (41%), Gaps = 13/255 (5%)
Query: 60 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 119
+A + E M GL DE TYS+++ + K++ +L +A G+ P + ++ L
Sbjct: 239 KAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLG 298
Query: 120 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 179
+ D +L+ M + P+V YN ++ ++ G+
Sbjct: 299 KMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLT 358
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
P+ T ++L++ + +A L+ EM D + Y LLN C +G +A L
Sbjct: 359 PNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERL 418
Query: 240 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYS 299
++M P +Y A+++ + E+A+E+ M + G+ N
Sbjct: 419 FNDMKES-------VQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVN----- 466
Query: 300 TVISGFCQIGELGKA 314
V+ C + LGKA
Sbjct: 467 -VMGCTCLVQCLGKA 480
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 113/272 (41%), Gaps = 53/272 (19%)
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
V G+ D TYS+++ ++A + F M + G+ PDE+TY+ +L+ G+
Sbjct: 213 VKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKV 272
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFS----------------------------PAIVTYNA 265
+ L++ + G+ PD + FS P +V YN
Sbjct: 273 EEVLSLYERAVATGWKPDAI-AFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 266 LIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKA 325
L+ + + A + M E GL+PN + + ++ + + A +L E + K
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Query: 326 IWWLDEDTYDSLMDSLS-----------YED------------TYSSVMNDYLAEGNMQR 362
W +D Y++L++ + + D +Y++++N Y + G ++
Sbjct: 392 -WPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEK 450
Query: 363 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR 394
A++L +M + G + + + L+ L K R
Sbjct: 451 AMELFEEMLKAGVQVNVMGCTCLVQCLGKAKR 482
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 78/196 (39%), Gaps = 3/196 (1%)
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
+ G++ E + E G D +S + F D +L EM + P+VV
Sbjct: 268 KSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVV 327
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
YN+L+ A R A + M E GL+P+ + ++ +
Sbjct: 328 VYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEM 387
Query: 174 VDKGIFPDAATYSSLMEALCVEQRL-SEAFDLFREMLRG-GVSPDELTYTRLLNACCLVG 231
K D Y++L+ +C + L EA LF +M PD +YT +LN G
Sbjct: 388 KAKKWPMDFILYNTLLN-MCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGG 446
Query: 232 EFTKAFHLHDEMIHKG 247
+ KA L +EM+ G
Sbjct: 447 KAEKAMELFEEMLKAG 462
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 31/197 (15%)
Query: 203 DLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVT 262
+LFREM + G+ + +TYT L+ G+ A + EM+ G PD I+T
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPD--------IMT 53
Query: 263 YNALIHGLCFLDRVEEAL---------EILRGMPEMGLSPNAVSYSTVISGFCQIGELGK 313
YN L+ GLC ++E+AL ++ + G+ PN V+Y+T+ISGFC+ G +
Sbjct: 54 YNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEE 113
Query: 314 AYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRD 373
AY L + ED L DS TY++++ +L +G+ + +L +M
Sbjct: 114 AYTL--------FRKMKED--GPLPDS----GTYNTLIRAHLRDGDKAASAELIKEMRSC 159
Query: 374 GYLSSYVAYSVLINGLH 390
+ Y ++ + LH
Sbjct: 160 RFAGDASTYGLVTDMLH 176
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
+G+ + TY++L++ L A ++F+EM+ GV PD +TY LL+ C G+ K
Sbjct: 10 RGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEK 69
Query: 236 AFHLHDEMIHKG---FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
A L + G F + G P +VTY +I G C EEA + R M E G
Sbjct: 70 A--LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPL 127
Query: 293 PNAVSYSTVISGFCQIGELGKAYEL 317
P++ +Y+T+I + G+ + EL
Sbjct: 128 PDSGTYNTLIRAHLRDGDKAASAEL 152
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 21/196 (10%)
Query: 63 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 122
++ M +GL + TY+++I D A + EM++ G P ++TYN L+
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 123 CRRDSVDKAV---------GILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
C+ ++KA+ + +++ +G+ P+V +Y +IS FC
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
+ G PD+ TY++L+ A + + + +L +EM + D TY + +
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM------- 174
Query: 234 TKAFHLHDEMIHKGFL 249
LHD + KGFL
Sbjct: 175 -----LHDGRLDKGFL 185
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 10/183 (5%)
Query: 280 LEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMD 339
+E+ R M + GL N V+Y+T+I G Q G+ A E+ E + D TY+ L+D
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPP-DIMTYNILLD 59
Query: 340 SLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 399
L + + L G ++ L +S G + V Y+ +I+G KK EA
Sbjct: 60 GLCK----NGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAY 115
Query: 400 RDLLYIASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMRDLSDDAATAH--TT 456
+ DG +P Y+ L+ + + + + EL+K+ + DA+T T
Sbjct: 116 TLFRKMKEDG--PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Query: 457 MLH 459
MLH
Sbjct: 174 MLH 176
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHT---------L 99
++ L + G A+++ + M G+ D TY+ ++ C K++ A L
Sbjct: 23 IQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDL 82
Query: 100 LSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI 154
+ KG P+VVTY +++ +C++ ++A + R M E G PD +YN +I
Sbjct: 83 FCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLI 137
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 8/237 (3%)
Query: 108 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
+PS+ T+ LV D+++KA+ I MA +G D Y+ ++
Sbjct: 197 LNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVL 256
Query: 168 XXXXXXVDK--GIFPDAATYSSLMEALCVEQRLSEAFDLFREML--RGGVSPDELTYTRL 223
+K G D Y LM+ +++ EA + + E + V + Y +
Sbjct: 257 KLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYV 316
Query: 224 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 283
L A G+F +A L D + + P + + + T+N +++G C + EEA+E+
Sbjct: 317 LEALSENGKFDEALKLFDAVKKEHNPPRHL---AVNLGTFNVMVNGYCAGGKFEEAMEVF 373
Query: 284 RGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDS 340
R M + SP+ +S++ +++ C L +A +L E E+K + DE TY LMD+
Sbjct: 374 RQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKP-DEYTYGLLMDT 429
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 21/228 (9%)
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAE-----RGLSPDVDSYNRVISKFCXXXXXXX 165
S + YN ++ A D+A+ + A+ + R L+ ++ ++N +++ +C
Sbjct: 309 SAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEE 368
Query: 166 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
D PD ++++LM LC + L+EA L+ EM V PDE TY L++
Sbjct: 369 AMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 285
C G+ + + M+ + P + YN L L ++++A
Sbjct: 429 TCFKEGKIDEGAAYYKTMVE--------SNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDM 480
Query: 286 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDT 333
M L + +Y ++ + G L + LKI E LD+DT
Sbjct: 481 MVS-KLKMDDEAYKFIMRALSEAGRLDEM--LKIVDE-----MLDDDT 520
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 131/326 (40%), Gaps = 32/326 (9%)
Query: 110 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 169
P++ T N+++ A R+ + + + + G++P++ +YN + +
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 170 XXXXVDKG-IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+D + P AT+ L++ L L +A ++ +M G D + Y+ L+ C
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV 247
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 288
+ L+ E+ K + GF V Y L+ G + +EA+E E
Sbjct: 248 KNSDADGVLKLYQELKEK------LGGFVDDGVVYGQLMKGYFMKEMEKEAMECY----E 297
Query: 289 MGLSPN------AVSYSTVISGFCQIGELGKAYEL--KIETEDKAIWWLDEDTYDSLMDS 340
+ N A++Y+ V+ + G+ +A +L ++ E L +
Sbjct: 298 EAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNL------- 350
Query: 341 LSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKR 400
T++ ++N Y A G + A+++ M ++++ L+N L EA++
Sbjct: 351 ----GTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEK 406
Query: 401 DLLYIASDGFLSMPSYTVYDILLENC 426
LY + P Y +L++ C
Sbjct: 407 --LYGEMEEKNVKPDEYTYGLLMDTC 430
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 13/262 (4%)
Query: 48 SLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG 107
+++RL + R + E ++E K +E YS++I + + + A +M G
Sbjct: 73 TVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYG 132
Query: 108 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER--GLSPDVDSYNRVISKFCXXXXXXX 165
S V++N+L+ A + DK + + +R + PD SY +I +C
Sbjct: 133 TPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEK 192
Query: 166 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYT-RLL 224
KG+ +++++ +L + L A +L+ EM++ G D Y R++
Sbjct: 193 AIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIM 252
Query: 225 NACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 284
+A E K L +EM G PD ++YN L+ C ++EA ++
Sbjct: 253 SAQKESPERVK--ELIEEMSSMGLKPD--------TISYNYLMTAYCERGMLDEAKKVYE 302
Query: 285 GMPEMGLSPNAVSYSTVISGFC 306
G+ +PNA ++ T+I C
Sbjct: 303 GLEGNNCAPNAATFRTLIFHLC 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 23/239 (9%)
Query: 185 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 244
YS+L+ + + A F +M + G +++ LLNAC F K L DE
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDE-- 162
Query: 245 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISG 304
+P P ++Y LI C E+A+EI+R M G+ ++++T++S
Sbjct: 163 ----IPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSS 218
Query: 305 FCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRAL 364
+ GEL A L E K LD Y+ + S E +R
Sbjct: 219 LYKKGELEVADNLWNEMVKKGC-ELDNAAYNVRIMSAQKESP--------------ERVK 263
Query: 365 QLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 423
+L +MS G ++Y+ L+ ++ EAK+ +Y +G P+ + L+
Sbjct: 264 ELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKK--VYEGLEGNNCAPNAATFRTLI 320
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 13/200 (6%)
Query: 110 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 169
P ++Y L+ +YC + +KA+ I+R M +G+ ++ ++S
Sbjct: 172 PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNL 231
Query: 170 XXXXVDKGIFPDAATYSSLMEALCVE--QRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 227
V KG D A Y+ + + E +R+ E L EM G+ PD ++Y L+ A
Sbjct: 232 WNEMVKKGCELDNAAYNVRIMSAQKESPERVKE---LIEEMSSMGLKPDTISYNYLMTAY 288
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
C G +A + +++G + +P T+ LI LC+ E+ I +
Sbjct: 289 CERGMLDEA-----KKVYEGLEGN---NCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSV 340
Query: 288 EMGLSPNAVSYSTVISGFCQ 307
M P+ + ++ G +
Sbjct: 341 YMHKIPDFNTLKHLVVGLVE 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 80/183 (43%), Gaps = 3/183 (1%)
Query: 73 LFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAV 132
+ D+ +Y +I +C+ + A ++ +M KG + + + +++ + ++ ++ A
Sbjct: 170 IIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVAD 229
Query: 133 GILRAMAERGLSPDVDSYN-RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 191
+ M ++G D +YN R++S G+ PD +Y+ LM A
Sbjct: 230 NLWNEMVKKGCELDNAAYNVRIMS--AQKESPERVKELIEEMSSMGLKPDTISYNYLMTA 287
Query: 192 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 251
C L EA ++ + +P+ T+ L+ C + + + + + ++ +PD
Sbjct: 288 YCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPD 347
Query: 252 FVT 254
F T
Sbjct: 348 FNT 350
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
G+ ++ Y+ VI +D EMI GF+P+ VT+N L+ Y + + K
Sbjct: 659 GIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKA-KLFKK 717
Query: 132 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 191
V L +A+R DV SYN +I+ + G Y++L++A
Sbjct: 718 VNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDA 777
Query: 192 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 251
++++ + + + M + PD TY ++N G + + E+ G PD
Sbjct: 778 YGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPD 837
Query: 252 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
+ +YN LI VEEA+ +++ M + P+ V+Y+ +++
Sbjct: 838 --------LCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%)
Query: 75 LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 134
+D +Y+++I + + + + M GFS S+ YN+L+ AY + ++K I
Sbjct: 731 VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSI 790
Query: 135 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 194
L+ M + PD +YN +I+ + + G+ PD +Y++L++A +
Sbjct: 791 LKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGI 850
Query: 195 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
+ EA L +EM + PD++TYT L+ A EF +A
Sbjct: 851 GGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEA 892
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 149/359 (41%), Gaps = 32/359 (8%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM-IAKGFSPSVVT 114
G EAE++ +K G+ LD +S V+ + ++ A ++L M K P V
Sbjct: 572 GEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYL 631
Query: 115 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 174
+ ++ Y + D DK + + + G+ + + YN VI+ +
Sbjct: 632 FRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMI 691
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 234
G P+ T++ L++ + + +LF R GV D ++Y ++ A ++T
Sbjct: 692 RYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYT 750
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
++ + + F GFS ++ YN L+ ++E+ IL+ M + P+
Sbjct: 751 ---NMSSAIKNMQF-----DGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPD 802
Query: 295 AVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDE--DTYDSLMDSLSYED--TYSSV 350
+Y+ +I+ + GE G W+DE D L +S D +Y+++
Sbjct: 803 HYTYNIMINIY---GEQG---------------WIDEVADVLKELKESGLGPDLCSYNTL 844
Query: 351 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 409
+ Y G ++ A+ L +M + V Y+ L+ L + EA + L++ G
Sbjct: 845 IKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/488 (19%), Positives = 194/488 (39%), Gaps = 47/488 (9%)
Query: 58 IPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNS 117
+ EAE M+ G+ E YSS+I + L D A ++ M + +
Sbjct: 261 VEEAEFAFSHMRKFGIVC-ESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLV 319
Query: 118 LVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG 177
++ AY ++ ++ A IL +M G SP++ +YN +I+ + + G
Sbjct: 320 MLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIG 379
Query: 178 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 237
+ PD +Y S++E EA ++E+ R G P+ L+N G+ A
Sbjct: 380 LEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAI 439
Query: 238 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVS 297
++M G + G ++ + +++ +L+G + N S
Sbjct: 440 KTIEDMTGIGCQYSSILGI---------ILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTS 490
Query: 298 YSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTY-DSLMDSLSYEDTYSSVMNDYLA 356
+S+++ + + G + D + L E + DS +S Y S
Sbjct: 491 FSSLVMAYVKHGMV-----------DDCLGLLREKKWRDSAFESHLYHLLICSCKES--- 536
Query: 357 EGNMQRALQL-DHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL--SM 413
G + A+++ +H M D ++ ++ S +I+ EA++ L + S G + +
Sbjct: 537 -GQLTDAVKIYNHKMESDEEINLHIT-STMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRI 594
Query: 414 PSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT--- 470
V + ++ S E S++E++ + +D+ D ML + K D ++K
Sbjct: 595 GFSIVVRMYVKAGSLEEACSVLEIMDE--QKDIVPDVYL-FRDMLRIYQKCDLQDKLQHL 651
Query: 471 -----------DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDD 519
+ MYN +I R+ + + + EM+ YG P+ + L+
Sbjct: 652 YYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGK 711
Query: 520 DRMYNEMS 527
+++ +++
Sbjct: 712 AKLFKKVN 719
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 22/264 (8%)
Query: 49 LKRL--CREGRIPEAEQMLEVMKCKG-LFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIA 105
LKRL C + A + + M+C G L + YS ++ + D A L+ E+
Sbjct: 146 LKRLESCSD---TNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCG 202
Query: 106 -KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX 164
F S +N++++A ++ +V A M E G+ P+V + ++ +
Sbjct: 203 FHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVE 262
Query: 165 XXXXXXXXXVDKGIFPDAATYSSLME---ALCVEQRLSEAFDLFREMLRGGVSPDELTYT 221
GI ++A YSS++ L + + E DL ++ +
Sbjct: 263 EAEFAFSHMRKFGIVCESA-YSSMITIYTRLRLYDKAEEVIDLMKQ---------DRVRL 312
Query: 222 RLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALE 281
+L N ++ +++ + E+ + GFSP I+ YN LI G + ++E A
Sbjct: 313 KLENWLVMLNAYSQQGKM--ELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQG 370
Query: 282 ILRGMPEMGLSPNAVSYSTVISGF 305
+ + +GL P+ SY ++I G+
Sbjct: 371 LFHRLCNIGLEPDETSYRSMIEGW 394
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 138/363 (38%), Gaps = 66/363 (18%)
Query: 108 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 167
+ S VTYN+ + R +SV + ++ M G D+D+Y +V +F
Sbjct: 259 YQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETV 318
Query: 168 XXXXXXVDKGIFPDAATYSSLMEAL--CVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
+D P S L+ L L F + R+ G S + Y +
Sbjct: 319 KLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHR 378
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 285
+ VG F +A + M + G+ PD +TY+ L+ GLC R+EEA +L
Sbjct: 379 SLTSVGRFDEAEEITKAMRNAGYEPD--------NITYSQLVFGLCKAKRLEEARGVLDQ 430
Query: 286 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL---- 341
M G P+ +++ +I G C+ EL KA +K + +D + D L+D
Sbjct: 431 MEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKG-FDIDSNLLDVLIDGFVIHN 489
Query: 342 -------------------SYEDTYSSVMNDYLAEGNMQRALQLDHDMSR---------- 372
++ TY +++ L + AL L M +
Sbjct: 490 KFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAF 549
Query: 373 DGYLS---------------------SYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 411
DGYL+ S+ AY +I +++ R +AK +LL+I F
Sbjct: 550 DGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAK-NLLFICPHHFK 608
Query: 412 SMP 414
+ P
Sbjct: 609 THP 611
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 98/247 (39%), Gaps = 13/247 (5%)
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
G L + Y + ++ + D A + M G+ P +TY+ LVF C+ +++A
Sbjct: 365 GKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEA 424
Query: 132 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 191
G+L M +G PD+ ++ +I C ++KG D+ L++
Sbjct: 425 RGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDG 484
Query: 192 LCVEQRLSEAFDLFREMLR-GGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 250
+ + A EM++ V P + TY L++ + + +A L +M+ K P
Sbjct: 485 FVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLL-QMMKKQNYP 543
Query: 251 DFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGE 310
+ F + + L FLD + SP+ +Y VI F + G
Sbjct: 544 AYAEAFDGYLAKFGTLEDAKKFLDVLSSK-----------DSPSFAAYFHVIEAFYREGR 592
Query: 311 LGKAYEL 317
L A L
Sbjct: 593 LTDAKNL 599
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Query: 50 KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS 109
+ L GR EAE++ + M+ G D TYS ++ C +++ A +L +M A+G
Sbjct: 378 RSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCF 437
Query: 110 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 169
P + T+ L+ +C+ + +DKA+ M E+G D + + +I F
Sbjct: 438 PDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIF 497
Query: 170 XXXXV-DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 208
V + + P +TY L++ L ++ EA DL + M
Sbjct: 498 LMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMM 537
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/366 (19%), Positives = 148/366 (40%), Gaps = 56/366 (15%)
Query: 47 QSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 106
++++RL + E++LE E + +I + + ++A + EM +
Sbjct: 76 RTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPER 135
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
+ +++N+L+ A D GI + + + LS
Sbjct: 136 NCKRTALSFNALLNACVNSKKFDLVEGIFKELPGK-LS---------------------- 172
Query: 167 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
I PD A+Y++L++ LC + +EA L E+ G+ PD +T+ LL+
Sbjct: 173 -----------IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHE 221
Query: 227 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 286
G+F + + M+ K D I +YNA + GL ++ EE + + +
Sbjct: 222 SYTKGKFEEGEQIWARMVEKNVKRD--------IRSYNARLLGLAMENKSEEMVSLFDKL 273
Query: 287 PEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDT 346
L P+ +++ +I GF G+L D+AI W E + L +
Sbjct: 274 KGNELKPDVFTFTAMIKGFVSEGKL-----------DEAITWYKEIEKNGCR-PLKF--V 319
Query: 347 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 406
++S++ G+++ A +L ++ L +++ L K ++ EA+ +
Sbjct: 320 FNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELAK 379
Query: 407 SDGFLS 412
++ +L
Sbjct: 380 TNDYLQ 385
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 94/245 (38%), Gaps = 36/245 (14%)
Query: 7 SFTAALKMALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLE 66
SF A L +N ++ + F GK E V +K LC +G EA +++
Sbjct: 143 SFNALLNACVNSKKFDLVEGIFKELPGKLSIEPD-VASYNTLIKGLCGKGSFTEAVALID 201
Query: 67 VMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRD 126
++ KGL D T++ ++ K + + + M+ K + +YN+ + +
Sbjct: 202 EIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMEN 261
Query: 127 SVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYS 186
++ V + + L PDV T++
Sbjct: 262 KSEEMVSLFDKLKGNELKPDV-----------------------------------FTFT 286
Query: 187 SLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHK 246
++++ E +L EA ++E+ + G P + + LL A C G+ A+ L E+ K
Sbjct: 287 AMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAK 346
Query: 247 GFLPD 251
L D
Sbjct: 347 RLLVD 351
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 130/309 (42%), Gaps = 24/309 (7%)
Query: 80 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 139
Y+ V+ + + KI A EM+ G P V +++ Y R + +A+
Sbjct: 191 YTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQ 250
Query: 140 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 199
ER + YN ++S V++G+ P+ TY+ ++ + +
Sbjct: 251 ERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKE 310
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 259
EA F EM G P+E+TY+ +++ G++ KA L+++M +G +P T +
Sbjct: 311 EALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATML 370
Query: 260 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKI 319
+ Y + +AL + M + + V +I + ++G A +
Sbjct: 371 SLYYKT--------ENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFE 422
Query: 320 ETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDM-SRDGYLSS 378
ETE ++ L+ E TY ++ +L GN+ +AL + M +RD LS
Sbjct: 423 ETER--------------LNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSR 468
Query: 379 YVAYSVLIN 387
+ AY V++
Sbjct: 469 F-AYIVMLQ 476
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 117/293 (39%), Gaps = 16/293 (5%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L G+ EAE + K + LD Y+++I K+ A + M G S
Sbjct: 749 LTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCS 808
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+ TYN+++ Y R +DKA+ I GL D Y +I +
Sbjct: 809 IQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFS 868
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFD-LFREMLRGGVSPDELTYTRLLNACCLV 230
KGI P +Y ++M +C RL D L + M R G D TY L+
Sbjct: 869 EMQKKGIKPGTPSY-NMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAES 927
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
+F +A + KG +P + +AL+ +EEA M E G
Sbjct: 928 SQFAEAEKTITLVKEKG-IPLSHSH---FSSLLSALVKA----GMMEEAERTYCKMSEAG 979
Query: 291 LSPNAVSYSTVISGFCQIGELGKA---YELKIET---EDKAIWWLDEDTYDSL 337
+SP++ T++ G+ G+ K YE I + +D+ + + ED Y ++
Sbjct: 980 ISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVVEDLYKAV 1032
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 26/190 (13%)
Query: 204 LFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD--EMIHKGFLPDFVTGFSPAIV 261
LFR+M+ G+ PD LN CLV + + H++D + H+ V P
Sbjct: 275 LFRQMVDSGIEPDVFA----LN--CLVKGYVLSLHVNDALRIFHQM---SVVYDCEPNSF 325
Query: 262 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIET 321
TY+ LIHGLC R A E+L M G PN SY+++++ F GE+ A
Sbjct: 326 TYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAV------ 379
Query: 322 EDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 381
K +W + E+ ++D +SY +++++ +G A +L +M R+ L +
Sbjct: 380 --KCLWEMIEN--GRVVDFISYR----TLVDESCRKGKYDEATRL-LEMLREKQLVDRDS 430
Query: 382 YSVLINGLHK 391
Y L+N LHK
Sbjct: 431 YDKLVNVLHK 440
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 20/228 (8%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG---FSPSVVTYNSLVFAYCRRDS----- 127
+E Y+S+I +F K+ A + M+ P++ TY+ L A R +
Sbjct: 206 NENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYIN 265
Query: 128 ---VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX-XXXXXXXXXVDKGIFPDAA 183
++ + R M + G+ PDV + N ++ + V P++
Sbjct: 266 HVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSF 325
Query: 184 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
TY L+ LC + R A +L EM G P+ +Y L+NA L GE A EM
Sbjct: 326 TYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEM 385
Query: 244 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
I G + DF ++Y L+ C + +EA +L + E L
Sbjct: 386 IENGRVVDF--------ISYRTLVDESCRKGKYDEATRLLEMLREKQL 425
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LC +GR A ++L MK KG + ++Y+S++ F +ID A L EMI G
Sbjct: 334 LCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVD 393
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVIS 155
++Y +LV CR+ D+A +L + E+ L D DSY+++++
Sbjct: 394 FISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRDSYDKLVN 436
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 95/236 (40%), Gaps = 18/236 (7%)
Query: 185 YSSLMEALCVEQRLSEAFDLFREMLRGG---VSPDELTYTRLLNACCLVGEFTKAFHLHD 241
Y+S++ +L A ++FR M+ P TY L A G + H++
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 242 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM-GLSPNAVSYST 300
E + F +G P + N L+ G V +AL I M + PN+ +Y
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 301 VISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM 360
+I G C G A EL E + K + +Y+S++N + G +
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGF--------------VPNGKSYNSLVNAFALSGEI 375
Query: 361 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 416
A++ +M +G + +++Y L++ +K + EA R L + + SY
Sbjct: 376 DDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSY 431
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 157/381 (41%), Gaps = 26/381 (6%)
Query: 23 GMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLE-VMKCKGLFLDERTYS 81
G+ G A + D G+ + ++ RL + GR A +++E +++ + L E YS
Sbjct: 78 GVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYS 137
Query: 82 SVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER 141
++ + L+ + L + + + F ++ YN+LV A + + A+ ++ M E
Sbjct: 138 YLLEFTVKLHGVSQGEKLFTR-VPQEFQNELL-YNNLVIACLDQGVIRLALEYMKKMREL 195
Query: 142 GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEA 201
G YNR+I + P +TY LM+ E +
Sbjct: 196 GYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGV 255
Query: 202 FDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIV 261
F M + GV P+E++Y L A + +T A + E I K D + ++
Sbjct: 256 LKAFDGMKKAGVEPNEVSYCILAMAHAVARLYTVA-EAYTEEIEKSITGDNWSTLDILMI 314
Query: 262 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIET 321
Y L + ++RG + + SY F ++G L +A EL
Sbjct: 315 LYGRLGKE----KELARTWNVIRGFHHV----RSKSYLLATEAFARVGNLDRAEEL---- 362
Query: 322 EDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 381
WL+ L ++ + ++S+++ Y +G +++A+ + +M+ +G+ + +
Sbjct: 363 ------WLEMKNVKGLKET----EQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSIT 412
Query: 382 YSVLINGLHKKARTREAKRDL 402
Y L G K +EA +++
Sbjct: 413 YRHLALGCAKAKLMKEALKNI 433
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 165/382 (43%), Gaps = 47/382 (12%)
Query: 51 RLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 110
RLC + +P A + ++ ++ GL+ D TYS +I + + + + + G P
Sbjct: 35 RLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRP 94
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
+ N L+ Y + + ++ A + M +R +V S+ +IS +
Sbjct: 95 MMFLVNVLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALELL 150
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
+ + P+ TYSS++ + +S+ L +++ G+ D + L++ +
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKL 207
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
GE A + DEM VTG + + +N++I G R + ALE+ + M G
Sbjct: 208 GEPEDALSVFDEM---------VTGDA---IVWNSIIGGFAQNSRSDVALELFKRMKRAG 255
Query: 291 LSPNAVSYSTVISGFCQIG--ELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS 348
+ ++V+ + ELG + I D+ D +++ +
Sbjct: 256 FIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ----------DLILN--------N 297
Query: 349 SVMNDYLAEGNMQRALQLDHDMS-RDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 407
++++ Y G+++ AL++ + M RD + +S +I+GL + ++EA + + S
Sbjct: 298 ALVDMYCKCGSLEDALRVFNQMKERD-----VITWSTMISGLAQNGYSQEALKLFERMKS 352
Query: 408 DGFLSMPSYTVYDILLENCSNS 429
G + P+Y +L CS++
Sbjct: 353 SG--TKPNYITIVGVLFACSHA 372
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 128/331 (38%), Gaps = 58/331 (17%)
Query: 17 NVNIYNGMIRGFATAAGKSDSESKKV----------GEAFQSLKRLCREGRIPEAEQMLE 66
++ I+N M RG++ + S V F SL + C + E + L
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 67 VMKCKGLFLDERTY--SSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 124
+ K L LD+ Y ++I + +DSA + ++ P VV YN+++ Y R
Sbjct: 153 CLSMK-LGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV----EPCVVCYNAMITGYAR 207
Query: 125 RDSVDKAVGILRAMAERGLSPDVDSYNRVIS---------------------KFCXXXXX 163
R+ ++A+ + R M + L P+ + V+S FC
Sbjct: 208 RNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKV 267
Query: 164 XXXXX----------XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV 213
+K + D +S+++ A + ++ +F M V
Sbjct: 268 NTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENV 327
Query: 214 SPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFL 273
PDE+T+ LLNAC G + +M+ K G P+I Y +++ L
Sbjct: 328 QPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK-------FGIVPSIKHYGSMVDLLSRA 380
Query: 274 DRVEEALEILRGMPEMGLSPNAVSYSTVISG 304
+E+A E + +P +SP + + +++
Sbjct: 381 GNLEDAYEFIDKLP---ISPTPMLWRILLAA 408
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 41/285 (14%)
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
PD ++S+ E F LF E+L G+ PD T+ LL AC + + L
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 240 HDEMIHKGF------LPDFVTGFS-----------------PAIVTYNALIHGLCFLDRV 276
H + G P + ++ P +V YNA+I G +R
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRP 211
Query: 277 EEALEILRGMPEMGLSPNAVSYSTVISGFCQIG--ELGKAYE-----------LKIETE- 322
EAL + R M L PN ++ +V+S +G +LGK +K+ T
Sbjct: 212 NEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTAL 271
Query: 323 -DKAIWWLDEDTYDSLMDSLSYEDT--YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 379
D D S+ + + Y+DT +S+++ Y G ++++ + M +
Sbjct: 272 IDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDE 331
Query: 380 VAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 424
+ + L+N R E ++ + S F +PS Y +++
Sbjct: 332 ITFLGLLNACSHTGRVEEGRKYFSQMVSK-FGIVPSIKHYGSMVD 375
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 133/331 (40%), Gaps = 25/331 (7%)
Query: 12 LKMALNVNIYNGMIRGFATAAGKSDSES----------KKVGEAFQSLKRLCREGRIPE- 60
+K + V +YN ++ F + SE K F ++ R+ +P+
Sbjct: 169 MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKR 228
Query: 61 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 120
A + E M G D T +++I + +D A +L + + VT+++L+
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR 288
Query: 121 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 180
Y + D + I M G+ P++ YNR+I + G P
Sbjct: 289 IYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTP 348
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
+ +TY++L+ A + +A ++REM G+S + Y LL+ C +AF +
Sbjct: 349 NWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIF 408
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
+M + P T+++LI RV EA L M E G P ++
Sbjct: 409 QDMKN-------CETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTS 461
Query: 301 VISGFC---QIGELGKAY----ELKIETEDK 324
VI + Q+ ++ + + EL I +D+
Sbjct: 462 VIQCYGKAKQVDDVVRTFDQVLELGITPDDR 492
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 132/328 (40%), Gaps = 35/328 (10%)
Query: 80 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDK-AVGILRAM 138
Y+ + F ++ + L EM+ +G P T+ +++ + R++ V K AV M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTII-SCARQNGVPKRAVEWFEKM 236
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
+ G PD + +I + + DA T+S+L+ V
Sbjct: 237 SSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNY 296
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT-GFS 257
+++ EM GV P+ + Y RL+++ +G + + ++I+K D +T GF+
Sbjct: 297 DGCLNIYEEMKALGVKPNLVIYNRLIDS---MGRAKRPWQA--KIIYK----DLITNGFT 347
Query: 258 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
P TY AL+ ++AL I R M E GLS + Y+T++S + +A+E+
Sbjct: 348 PNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEI 407
Query: 318 -----KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSR 372
ET D W T+SS++ Y G + A M
Sbjct: 408 FQDMKNCETCDPDSW------------------TFSSLITVYACSGRVSEAEAALLQMRE 449
Query: 373 DGYLSSYVAYSVLINGLHKKARTREAKR 400
G+ + + +I K + + R
Sbjct: 450 AGFEPTLFVLTSVIQCYGKAKQVDDVVR 477
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 118/296 (39%), Gaps = 39/296 (13%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
LCREGR+ EA + + M+ + + T++++I + N++D A L M K +
Sbjct: 182 LCREGRVDEARLIFDEMRERNVV----TWTTMITGYRQNNRVDVARKLFEVMPEK----T 233
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V++ S++ Y ++ A M + P V + N +I F
Sbjct: 234 EVSWTSMLLGYTLSGRIEDAEEFFEVMP---MKP-VIACNAMIVGFGEVGEISKARRVFD 289
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
D+ D AT+ +++A + EA DLF +M + GV P + +L+ C +
Sbjct: 290 LMEDR----DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLA 345
Query: 232 EFTKAFHLHDEMIHKGFLPD-----------------------FVTGFSPAIVTYNALIH 268
+H ++ F D F S I+ +N++I
Sbjct: 346 SLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIIS 405
Query: 269 GLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDK 324
G EEAL+I MP G PN V+ +++ G+L + E+ E K
Sbjct: 406 GYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESK 461
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 108/267 (40%), Gaps = 23/267 (8%)
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
S + +TY SL+ YC+ +KA G+L M E ++P SYN +++ +
Sbjct: 120 SKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPA 179
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGG-VSPDELTYTRLLNAC 227
+ + PD+ TY+ M AL +S + EM R G V+PD TY+ + +
Sbjct: 180 MIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIY 239
Query: 228 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
G KA E+ K DF Y LI L ++ E I R +
Sbjct: 240 VDAGLSQKAEKALQELEMKNTQRDF--------TAYQFLITLYGRLGKLTEVYRIWRSLR 291
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 347
+ V+Y +I ++ +L A L E W + TYD + ++
Sbjct: 292 LAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKE------WQANCSTYDIRIVNV------ 339
Query: 348 SSVMNDYLAEGNMQRALQLDHDMSRDG 374
++ Y EG +Q+A +L R G
Sbjct: 340 --LIGAYAQEGLIQKANELKEKAPRRG 364
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 121/329 (36%), Gaps = 74/329 (22%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K L + G EA + MK +GL +D+ + SV+ L I+ + + +I F
Sbjct: 242 IKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF 301
Query: 109 S-------------------------------PSVVTYNSLVFAYCRRDSVDKAVGILRA 137
+VV++ ++V Y + ++AV I
Sbjct: 302 QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLD 361
Query: 138 MAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF------------------ 179
M G+ PD + + IS + G+
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 180 -------------PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
DA ++++++ A R E LF +M++ G+ PD +T T +++A
Sbjct: 422 IDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISA 481
Query: 227 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 286
C G K M + G P+I Y+ +I R+EEA+ + GM
Sbjct: 482 CSRAGLVEKGQRYFKLMTSE-------YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM 534
Query: 287 PEMGLSPNAVSYSTVISGFCQIG--ELGK 313
P P+A+ ++T++S G E+GK
Sbjct: 535 P---FPPDAIGWTTLLSACRNKGNLEIGK 560
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 114/275 (41%), Gaps = 61/275 (22%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
TY+ I +C L K + A L EM+ KGF VV Y++++ Y + + AV ++ M
Sbjct: 390 TYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKM 449
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
+RG P++ YN +I M ++ R
Sbjct: 450 KQRGCKPNIWIYNSLID---------------------------------MHGRAMDLRR 476
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM-IHKGFLPDFVTGFS 257
+E +++EM R V PD+++YT +++A E + L+ E +++G + + G
Sbjct: 477 AE--KIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIM 534
Query: 258 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
+ + + R++E + +L+ M G +A YS+ ++ G
Sbjct: 535 VGVFSKTS---------RIDELMRLLQDMKVEGTRLDARLYSSALNALRDAG-------- 577
Query: 318 KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMN 352
+ I WL E ++D+ S S YS+ N
Sbjct: 578 ----LNSQIRWLQE-SFDAAQTSTS---KYSNTKN 604
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 112/296 (37%), Gaps = 68/296 (22%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L + GR EA ++LE MK KG+ YS +I F ++ L E K
Sbjct: 258 LAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKD 317
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+V Y R +++ + ++ AM + L
Sbjct: 318 PEMCLKVVLMYVREGNMETTLEVVAAMRKAELK--------------------------- 350
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
V I +++ ++ +EA ++ ++ ++TY +NA C +
Sbjct: 351 --VTDCIL------CAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLE 402
Query: 232 EFTKAFHLHDEMIHKGF-------------------LPDFV--------TGFSPAIVTYN 264
++ KA L DEM+ KGF L D V G P I YN
Sbjct: 403 KYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYN 462
Query: 265 ALI--HGLCF-LDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
+LI HG L R E +I + M + P+ VSY+++IS + + EL + EL
Sbjct: 463 SLIDMHGRAMDLRRAE---KIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVEL 515
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 131/341 (38%), Gaps = 46/341 (13%)
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 259
+ FD ++ + GV P Y R++ A +GE K L E + F+ S +
Sbjct: 194 QVFDRLKQSV--GVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRL--SFLAKESGS 249
Query: 260 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKI 319
I Y + L R EALE+L M + G+ ++ YS +I F + E+ +L
Sbjct: 250 I--YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFK 307
Query: 320 ETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 379
E K + L + V+ Y+ EGNM+ L++ M + +
Sbjct: 308 EAGGKKL--------------LKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTD 353
Query: 380 VAYSVLINGLHKKARTREAKR-------------DLLY-IASDGFLSMPSYTVYDILLEN 425
++NG K+ EA + + Y IA + + + Y ++L +
Sbjct: 354 CILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDE 413
Query: 426 CSNSEFKSLVELVKDY-----SMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIF 480
F V + R LSD L K K G K + +YN LI
Sbjct: 414 MVKKGFDKCVVAYSNIMDMYGKTRRLSD------AVRLMAKMKQRG-CKPNIWIYNSLID 466
Query: 481 EHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDR 521
H R+ ++ +A ++ EM P S ++ISA + +
Sbjct: 467 MHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSK 507
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 11/216 (5%)
Query: 20 IYNGM--IRGFATA------AGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCK 71
I NG RGFA A A K + E+ +V A ++ CR + +AE + + M K
Sbjct: 359 IVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAI-AINAYCRLEKYNKAEMLFDEMVKK 417
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
G YS+++ + ++ A L+++M +G P++ YNSL+ + R + +A
Sbjct: 418 GFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRA 477
Query: 132 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX-XXXXXXXXVDKGIFPDAATYSSLME 190
I + M + PD SY +IS + +++G D A ++
Sbjct: 478 EKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKI-DRAMAGIMVG 536
Query: 191 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
R+ E L ++M G D Y+ LNA
Sbjct: 537 VFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNA 572
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 201 AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAI 260
A M G+ P L YT L++ + GE KA + EM KG LP+ +
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPN--------V 759
Query: 261 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIE 320
TYN++I GLC EA +L+ M G +PN V YST++ + G+L +A ++ E
Sbjct: 760 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKE 819
Query: 321 TEDKA 325
K
Sbjct: 820 MVKKG 824
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%)
Query: 91 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSY 150
NK +A T L+ M G PSV+ Y +L+ Y +DKA + R M +G P+V +Y
Sbjct: 703 NKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTY 762
Query: 151 NRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLR 210
N +I C +G P+ YS+L+ L +LSEA + +EM++
Sbjct: 763 NSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVK 822
Query: 211 GG 212
G
Sbjct: 823 KG 824
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
GI P Y++L++ V L +A ++FREM G P+ TY ++ C+ GEF +A
Sbjct: 719 GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 778
Query: 237 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
L EM +G P+F V Y+ L+ L ++ EA ++++ M + G
Sbjct: 779 CWLLKEMESRGCNPNF--------VVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 279 ALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLM 338
AL L M E+G+ P+ + Y+T+I G+ GEL KA E+ E K
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKG------------- 754
Query: 339 DSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
L TY+S++ G + A L +M G ++V YS L+ L K + EA
Sbjct: 755 -QLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEA 813
Query: 399 KRDLLYIASDG 409
++ + + G
Sbjct: 814 RKVIKEMVKKG 824
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 148/381 (38%), Gaps = 58/381 (15%)
Query: 17 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLD 76
NV ++N MI+ ++ VG +SL MK +G++ D
Sbjct: 66 NVLVFNAMIKCYSL-----------VGPPLESL-------------SFFSSMKSRGIWAD 101
Query: 77 ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 136
E TY+ ++ +L+ + + E+I GF +V Y + A +
Sbjct: 102 EYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFD 161
Query: 137 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 196
M+ER +V +N +I FC ++ I +++S++ +L
Sbjct: 162 EMSER----NVVVWNLMIRGFCDSGDVERGLHLFKQMSERSI----VSWNSMISSLSKCG 213
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 256
R EA +LF EM+ G PDE T +L +G +H G DF+T
Sbjct: 214 RDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFIT-- 271
Query: 257 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFC--QIGELG-K 313
NAL+ C +E A I R M N VS++T+ISG GE G
Sbjct: 272 -----VGNALVDFYCKSGDLEAATAIFRKMQRR----NVVSWNTLISGSAVNGKGEFGID 322
Query: 314 AYELKIETEDKAIWWLDEDTYDSLMDSLSY-------EDTYSSVMNDYLAEGNMQRALQL 366
++ IE A +E T+ ++ SY E+ + +M + E + +
Sbjct: 323 LFDAMIEEGKVAP---NEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAM 379
Query: 367 DHDMSRDGYLSSYVAYSVLIN 387
MSR G ++ A+ L N
Sbjct: 380 VDLMSRSGRITE--AFKFLKN 398
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 138/344 (40%), Gaps = 68/344 (19%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 112
C+E + A++ + MK K D R++++++ F L +++A + +M + +
Sbjct: 282 CKESGL--AKRAFDAMKKK----DMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR----DL 331
Query: 113 VTYNSLVFAYCRRDS--------------VDKA-------VGILRAMAERG--------- 142
V++NSL+F Y ++ V+K V ++ A G
Sbjct: 332 VSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVH 391
Query: 143 -------LSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 195
L D + +I +C +K D A ++S++ L
Sbjct: 392 GLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK----DVALWTSMITGLAFH 447
Query: 196 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 255
+A LF M GV+P+ +T +L AC G + H+ + M K G
Sbjct: 448 GNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDK-------FG 500
Query: 256 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG------ 309
F P Y +L+ LC RVEEA +I++ +M + P+ + +++S C+ G
Sbjct: 501 FDPETEHYGSLVDLLCRAGRVEEAKDIVQ--KKMPMRPSQSMWGSILSA-CRGGEDIETA 557
Query: 310 ELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMND 353
EL LK+E E + + L + Y ++ Y D M +
Sbjct: 558 ELALTELLKLEPEKEGGYVLLSNIYATV-GRWGYSDKTREAMEN 600
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 141/348 (40%), Gaps = 51/348 (14%)
Query: 17 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLK---RLCREGRIPEAEQMLEVMKCKGL 73
+V+ +N MI G+A K G + ++LK ++ +G P+ +L ++ C G
Sbjct: 196 DVSSFNVMIVGYA-----------KQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
Query: 74 FLDERTYSSVIGWFCNLNKIDSAHTLLSE-------------MIAKGF----SPSVVTYN 116
D R V GW + S++ +LS + + F + ++N
Sbjct: 245 LSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWN 304
Query: 117 SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI---SKFCXXXXXXXXXXXXXXX 173
++V + R ++ A + M +R D+ S+N ++ SK
Sbjct: 305 TMVVGFVRLGDMEAAQAVFDQMPKR----DLVSWNSLLFGYSKKGCDQRTVRELFYEMTI 360
Query: 174 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 233
V+K + PD T SL+ LS + ++R + D + L++ C G
Sbjct: 361 VEK-VKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGII 419
Query: 234 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 293
+AF + F T + + ++I GL F ++AL++ M E G++P
Sbjct: 420 ERAFMV------------FKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTP 467
Query: 294 NAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL 341
N V+ V++ G + + + +DK + + + Y SL+D L
Sbjct: 468 NNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLL 515
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 8/208 (3%)
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
G V++N + ++C +D A +R M + GL+PDV +Y +IS
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 167 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
V KG P+ T++ ++ L +R +A DL M + V PD +TY ++
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIK- 290
Query: 227 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 286
G F F +M + + G+ P + Y +IH LC + A + +
Sbjct: 291 ----GFFLARF---PDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDC 343
Query: 287 PEMGLSPNAVSYSTVISGFCQIGELGKA 314
PN + ++ G + G+L +A
Sbjct: 344 MRKKWYPNLDTVEMLLKGLVKKGQLDQA 371
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 8/212 (3%)
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 131
G+ +D +++ I FC L +D A+ + EM G +P VVTY +L+ A + +
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 132 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 191
G+ M +G P++ ++N I + PD+ TY+ +++
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 192 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 251
+ + A ++ M G P+ Y +++ C G F A+ + + + K + P+
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 252 FVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 283
+ T L+ GL ++++A I+
Sbjct: 352 --------LDTVEMLLKGLVKKGQLDQAKSIM 375
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 40/198 (20%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC-----CLVG 231
GI DA +++ +++ C L A+ REM + G++PD +TYT L++A C++G
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 232 EFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYN 264
L + M+ KG P+ T P +TYN
Sbjct: 232 N-----GLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYN 286
Query: 265 ALIHGLCFLDRVEEALE-ILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETED 323
+I G FL R + E + M G PN Y T+I C+ G AY + +
Sbjct: 287 MVIKGF-FLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMR 345
Query: 324 KAIWWLDEDTYDSLMDSL 341
K W+ + DT + L+ L
Sbjct: 346 KK-WYPNLDTVEMLLKGL 362
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 3/204 (1%)
Query: 48 SLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG 107
++K C G + A + M+ GL D TY+++I + + L + M+ KG
Sbjct: 183 AIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKG 242
Query: 108 FSPSVVTYNSLV-FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
P++ T+N + F RR + D A +L M + + PD +YN VI F
Sbjct: 243 CKPNLTTFNVRIQFLVNRRRAWD-ANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMA 301
Query: 167 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
KG P+ Y +++ LC A+ + ++ +R P+ T LL
Sbjct: 302 ERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKG 361
Query: 227 CCLVGEFTKAFHLHDEMIHKGFLP 250
G+ +A + E++H+ P
Sbjct: 362 LVKKGQLDQAKSIM-ELVHRRVPP 384
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 91/213 (42%), Gaps = 26/213 (12%)
Query: 108 FSPS--VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 165
F P VVT N+L+ Y + D + A + M ER DV S+N ++S +
Sbjct: 138 FGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYER----DVISWNSLLSGYARLGQMKK 193
Query: 166 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
+DK I A S C EA D FREM G+ PDE++ +L
Sbjct: 194 AKGLFHLMLDKTIVSWTAMISGYTGIGC----YVEAMDFFREMQLAGIEPDEISLISVLP 249
Query: 226 ACCLVG--EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 283
+C +G E K HL+ E +GFL TG NALI + +A+++
Sbjct: 250 SCAQLGSLELGKWIHLYAE--RRGFLKQ--TGVC------NALIEMYSKCGVISQAIQLF 299
Query: 284 RGMPEMGLSPNAVSYSTVISGFCQIGELGKAYE 316
M + +S+ST+ISG+ G A E
Sbjct: 300 GQME----GKDVISWSTMISGYAYHGNAHGAIE 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 113/282 (40%), Gaps = 24/282 (8%)
Query: 66 EVMKCKGLF---LDER--TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 120
++ K KGLF LD+ +++++I + + A EM G P ++ S++
Sbjct: 190 QMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLP 249
Query: 121 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 180
+ + S++ I RG N +I + K
Sbjct: 250 SCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK---- 305
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
D ++S+++ A + F EM R V P+ +T+ LL+AC VG + +
Sbjct: 306 DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYF 365
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
D M D+ P I Y LI L ++E A+EI + MP + P++ + +
Sbjct: 366 DMMRQ-----DY--QIEPKIEHYGCLIDVLARAGKLERAVEITKTMP---MKPDSKIWGS 415
Query: 301 VISGFCQIGELGKA-----YELKIETEDKAIWWLDEDTYDSL 337
++S G L A + +++E ED + L + Y L
Sbjct: 416 LLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADL 457
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 10/252 (3%)
Query: 60 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIA-KGFSPSVVTYNSL 118
+A + EVM +GL Y+S+I + +D A + L M + P V T+ L
Sbjct: 162 QASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVL 221
Query: 119 VFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG- 177
+ C+ D I+ M+ G+ +YN +I + ++ G
Sbjct: 222 ISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGD 281
Query: 178 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 237
PD T +S++ + + + + + GV PD T+ L+ + G + K
Sbjct: 282 SLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMC 341
Query: 238 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVS 297
+ D M K F FS VTYN +I R+E+ ++ R M G+ PN+++
Sbjct: 342 SVMDFM-EKRF-------FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSIT 393
Query: 298 YSTVISGFCQIG 309
Y ++++ + + G
Sbjct: 394 YCSLVNAYSKAG 405
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 112/267 (41%), Gaps = 9/267 (3%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS-PS 111
C+ GR + ++ M G+ TY+++I + + ++L++MI G S P
Sbjct: 226 CKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPD 285
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
V T NS++ +Y ++ K G+ PD+ ++N +I F
Sbjct: 286 VCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMD 345
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ TY+ ++E R+ + D+FR+M GV P+ +TY L+NA G
Sbjct: 346 FMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAG 405
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 291
K + ++++ + D T F +N +I+ + E+ M E
Sbjct: 406 LVVKIDSVLRQIVNSDVVLD--TPF------FNCIINAYGQAGDLATMKELYIQMEERKC 457
Query: 292 SPNAVSYSTVISGFCQIGELGKAYELK 318
P+ ++++T+I + G EL+
Sbjct: 458 KPDKITFATMIKTYTAHGIFDAVQELE 484
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 12/264 (4%)
Query: 62 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 121
E M V CK D T++ +I C L + D +++ EM G S VTYN+++
Sbjct: 203 EYMKSVSDCKP---DVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDG 259
Query: 122 YCRRDSVDKAVGILRAMAERGLS-PDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 180
Y + ++ +L M E G S PDV + N +I + G+ P
Sbjct: 260 YGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQP 319
Query: 181 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 240
D T++ L+ + + + M + S +TY ++ G K +
Sbjct: 320 DITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVF 379
Query: 241 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYST 300
+M ++G P+ +T Y +L++ V + +LR + + + ++
Sbjct: 380 RKMKYQGVKPNSIT--------YCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNC 431
Query: 301 VISGFCQIGELGKAYELKIETEDK 324
+I+ + Q G+L EL I+ E++
Sbjct: 432 IINAYGQAGDLATMKELYIQMEER 455
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 83 VIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER- 141
+I F +ID +L EM P V+TYNS++ R V++ +G+L M E
Sbjct: 183 IIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDC 242
Query: 142 GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEA 201
+S ++ +YN V++ V GI PD +Y++++++L + E+
Sbjct: 243 SVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKES 302
Query: 202 FDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 243
LF EM + + P Y L++ G+F A L DE+
Sbjct: 303 LRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDEL 344
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 9/185 (4%)
Query: 87 FCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPD 146
F N + +LL E+ ++ N ++FA+ +DK + IL+ M E PD
Sbjct: 152 FINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPD 211
Query: 147 VDSYNRVISKFCXX-XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLF 205
V +YN V+ D + + TY++++ + R ++
Sbjct: 212 VITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIY 271
Query: 206 REMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNA 265
EM++ G+ PD L+YT ++++ G ++ L DEM + P++ Y A
Sbjct: 272 NEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQR--------QIRPSVYVYRA 323
Query: 266 LIHGL 270
LI L
Sbjct: 324 LIDCL 328
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 142/373 (38%), Gaps = 50/373 (13%)
Query: 98 TLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKF 157
TL + + G + T N+L+ Y +D A+ + +R DV +YN +I
Sbjct: 138 TLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQR----DVVTYNVLIDGL 193
Query: 158 CXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDE 217
D D +++SL+ EA LF EM+ G+ PD
Sbjct: 194 ----VKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDN 249
Query: 218 LTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD--FVTGF------------------- 256
+ L+AC G++ K +HD K D TG
Sbjct: 250 VAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFEL 309
Query: 257 --SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKA 314
+ T+NA+I GL E ++ R M G+ P+ V++ +V+ G G + +A
Sbjct: 310 CSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEA 369
Query: 315 YELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAE-GNMQRALQLDHDMSRD 373
L D SL D ++ E + M D L G ++ A ++ M +D
Sbjct: 370 RNL-------------FDQMRSLYD-VNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKD 415
Query: 374 -GYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFK 432
G +A+S L+ G A++ + + LS VY +++E +N+E
Sbjct: 416 GGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKA---LSPEDGGVYKVMVEMYANAERW 472
Query: 433 SLVELVKDYSMRD 445
V V++ RD
Sbjct: 473 EEVVKVREIIDRD 485
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 114/288 (39%), Gaps = 31/288 (10%)
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+V++NS++ + D+ A+ I R M G+ D S + +S
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 231
+ + D + S+L++ L A ++F+ M + +++ ++ AC G
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNI----VSWNSIIAACGNHG 622
Query: 232 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE-MG 290
+ + L EM+ K +G P +T+ +I C + V+E + R M E G
Sbjct: 623 KLKDSLCLFHEMVEK-------SGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYG 675
Query: 291 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 350
+ P Y+ V+ F + G L +AY ET + D + +L+ +
Sbjct: 676 IQPQQEHYACVVDLFGRAGRLTEAY----ETVKSMPFPPDAGVWGTLLGACRLHK----- 726
Query: 351 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
N LAE + + LD S Y VLI+ H AR E+
Sbjct: 727 -NVELAEVASSKLMDLDPSNS---------GYYVLISNAHANAREWES 764
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 117/322 (36%), Gaps = 49/322 (15%)
Query: 110 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 169
PSV +NS++ Y + DKA+ + M +G SPD ++ V+
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129
Query: 170 XXXXVDKG--------------------------IFPD-----AATYSSLMEALCVEQRL 198
V G +F D + SL+ R
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRF 189
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 258
S+A + FREM GV +E LL AC + H + GF P F +
Sbjct: 190 SDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGF 249
Query: 259 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELK 318
++ +LI + A + GMPE L VS++++I+G+ Q G+ +A +
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGMPERTL----VSWNSIITGYSQNGDAEEALCMF 305
Query: 319 IETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 378
++ D I D + T+ SV+ + +G Q + +S+ G++
Sbjct: 306 LDMLDLGI------APDKV--------TFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKD 351
Query: 379 YVAYSVLINGLHKKARTREAKR 400
L+N K AK+
Sbjct: 352 AAIVCALVNMYAKTGDAESAKK 373
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 17/151 (11%)
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRG-GVSPDELTYTRLLNACCLVGEFTKAFH 238
PD +++++ A EA LF M RG G+ PD T+ +L AC + +
Sbjct: 227 PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKE 286
Query: 239 LHDEMIHKGFLPDFVTGFSPAIVTYNALI--HGLCFLDRVEEALEILRGMPEMGLSPNAV 296
+H ++I G +V ++L+ +G C V EA ++ GM + N+V
Sbjct: 287 IHGKLI--------TNGIGSNVVVESSLLDMYGKC--GSVREARQVFNGMSK----KNSV 332
Query: 297 SYSTVISGFCQIGELGKAYELKIETEDKAIW 327
S+S ++ G+CQ GE KA E+ E E+K ++
Sbjct: 333 SWSALLGGYCQNGEHEKAIEIFREMEEKDLY 363
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 103/259 (39%), Gaps = 31/259 (11%)
Query: 7 SFTAALKMALNVNIYNGMIRGFATAAGKSDSE-------------SKKVGEAFQSLKRLC 53
SF +A + + + + +++ F +S + S + +F L+R
Sbjct: 68 SFLSAFQRHHRIRVIDEILQSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRTL 127
Query: 54 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 113
R G +P + L L D W S +++EM G+SP
Sbjct: 128 RSGCLPNPQTHL-------LLSD--------AWLERRRGSQSVADIINEMKLIGYSPDTG 172
Query: 114 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 173
T N LV + C D +D+A+ ++ M+ G PDV+SY VI+ C
Sbjct: 173 TCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVESYGAVINSLCLARKTTDVVKIVKEM 232
Query: 174 VDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL-TYTRLLNACCLVG 231
V K GI P + + AL + + +A ++ E + P E +Y ++ C V
Sbjct: 233 VSKAGISPRKGMLTKVAAALRANREIWKAIEMI-EFVESRDYPVEFESYEVVVEGCLEVR 291
Query: 232 EFTKAFHLHDEMIHKGFLP 250
E+ A + M +GF+P
Sbjct: 292 EYILAGKVVMRMTDRGFIP 310
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 83/165 (50%), Gaps = 11/165 (6%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAF-DLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
G P+ T+ L +A +R S++ D+ EM G SPD T L+++ C V + +
Sbjct: 130 GCLPNPQTHLLLSDAWLERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDE 189
Query: 236 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM-PEMGLSPN 294
A + +EM G +PD + +Y A+I+ LC + + ++I++ M + G+SP
Sbjct: 190 AIKVVEEMSAAGCIPD--------VESYGAVINSLCLARKTTDVVKIVKEMVSKAGISPR 241
Query: 295 AVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMD 339
+ V + E+ KA E+ IE + + ++ ++Y+ +++
Sbjct: 242 KGMLTKVAAALRANREIWKAIEM-IEFVESRDYPVEFESYEVVVE 285
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 115/288 (39%), Gaps = 19/288 (6%)
Query: 16 LNVNIYNGMIRGFATA----------AGKSDSESKKVGEAFQSLKRLCREGRIP-EAEQM 64
L+ N YN +I+ A A +S K + + +L L +P +A ++
Sbjct: 241 LSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEI 300
Query: 65 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 124
E M+ LD TY +I ++D+A L +M + PS ++SLV + +
Sbjct: 301 YESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGK 360
Query: 125 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 184
+D ++ + M G P + +I + G P+
Sbjct: 361 AGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGL 420
Query: 185 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 244
Y+ ++E+ +L A +F++M + G P TY+ LL G+ A +++ M
Sbjct: 421 YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMT 480
Query: 245 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
+ G P + +Y +L+ L V+ A +IL M MG S
Sbjct: 481 N--------AGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYS 520
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 8/238 (3%)
Query: 80 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 139
Y+ VI + K++ A + G TYN+L+ + + KA I +M
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 140 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 199
+ D +Y +I ++ + P + +SSL++++ RL
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 259
+ ++ EM G P + L+++ G+ A L DEM GF P+F G
Sbjct: 366 TSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNF--GL--- 420
Query: 260 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYEL 317
Y +I ++E A+ + + M + G P +YS ++ G++ A ++
Sbjct: 421 ---YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKI 475
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 95/239 (39%), Gaps = 22/239 (9%)
Query: 148 DSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFRE 207
++YN+VI + G D TY++LM + +AF+++
Sbjct: 244 NAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 208 MLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALI 267
M + D TY ++ + G AF L +M + P F +++L+
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSV--------FSSLV 355
Query: 268 HGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIW 327
+ R++ ++++ M G P+A + ++I + + G+L A L
Sbjct: 356 DSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRL---------- 405
Query: 328 WLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 386
W DE + Y+ ++ + G ++ A+ + DM + G+L + YS L+
Sbjct: 406 W-DEMKKSGFRPNFGL---YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLL 460
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 14/224 (6%)
Query: 47 QSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 106
+ ++ LC+E + EA+ + +K + + DE TY ++I FC++ + A L + M+ +
Sbjct: 186 RGVETLCKEKLVEEAKFVFIKLK-EFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDE 244
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM-AERGLSPDVDSYNRVISKFCXXXXXXX 165
GF + ++ +++ D+A + M ++RG D Y +I C
Sbjct: 245 GFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDM 304
Query: 166 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 225
++G++ D T++SL+ L V++R+ EA+ L + G +PD Y L+
Sbjct: 305 ARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGL----VEGVENPDISIYHGLIK 360
Query: 226 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHG 269
+ ++A + +MI + G P + TY L+ G
Sbjct: 361 GLVKIKRASEATEVFRKMIQR--------GCEPIMHTYLMLLQG 396
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 67/164 (40%)
Query: 69 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 128
+ KG D TY++++ F +I S +++ M KG VTY SL+ V
Sbjct: 114 QIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV 173
Query: 129 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 188
D A+ + M + G P V SY + + + P+ TY+ L
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 189 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
ME L + EA D+F +M GV PD+ L+ GE
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGE 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 175 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 234
+KG+ D TY+SL+ + + A L+ EM G P ++YT + G
Sbjct: 150 EKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVE 209
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
+A ++ EM+ + SP TY L+ L + EEAL+I M E+G+ P+
Sbjct: 210 EATEVYKEMLR--------SRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPD 261
Query: 295 AVSYSTVISGFCQIGE 310
+ + +I+ + GE
Sbjct: 262 KAACNILIAKALKFGE 277
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
KG D TY+++++ R+ + +F M GV D +TYT L++ G+
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 236 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
A L +EM G P +V+Y A + L RVEEA E+ + M +SPN
Sbjct: 176 AMRLWEEMRD--------NGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNC 227
Query: 296 VSYSTVISGFCQIGELGKAYEL 317
+Y+ ++ G+ +A ++
Sbjct: 228 HTYTVLMEYLVATGKCEEALDI 249
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 101/265 (38%), Gaps = 47/265 (17%)
Query: 83 VIGWFCNLNKIDSAHTL--LSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRA--- 137
VI N+N D +TL M + + +YN L+ C VD A I +
Sbjct: 304 VINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKR 363
Query: 138 MAERGL-SPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 196
M GL D +Y +I F G+ P+ T+SSL+ A
Sbjct: 364 MESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAG 423
Query: 197 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH--------------DE 242
+ +A LF EML G P+ + LL+AC ++ +AF L D+
Sbjct: 424 LVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADD 483
Query: 243 MIHKGFL--PDFVTG-----------------------FSPAIVTYNALIHGLCFLDRVE 277
++ KG P+ + F P TYN L+ C D
Sbjct: 484 IVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA-CGTDYY- 541
Query: 278 EALEILRGMPEMGLSPNAVSYSTVI 302
E++ M +GLSPN +++ST+I
Sbjct: 542 RGKELMDEMKSLGLSPNQITWSTLI 566
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 167/440 (37%), Gaps = 76/440 (17%)
Query: 10 AALKMALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMK 69
+ ++ +NV I+N +IRG+A ++G + + L RE M+
Sbjct: 77 SKIEKPINVFIWNTLIRGYA-----------EIGNSISAFS-LYRE------------MR 112
Query: 70 CKGLF-LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 128
GL D TY +I + + T+ S +I GF + NSL+ Y V
Sbjct: 113 VSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDV 172
Query: 129 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 188
A + M E+ D+ ++N VI+ F KGI PD T SL
Sbjct: 173 ASAYKVFDKMPEK----DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 228
Query: 189 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHK-- 246
+ A L+ + M++ G++ + + LL+ G +A L DEM+ K
Sbjct: 229 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 288
Query: 247 -------------GFLPDFV---------TGFSPAIVTYNALIHGLCFLDRVEEALEILR 284
GF + + G P +T+ +++ V+E E R
Sbjct: 289 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR 348
Query: 285 GM-PEMGLSPNAVSYSTVISGFCQIGELGKAYEL--KIETEDKAIWWLDEDTYDSLMDSL 341
M E + P + ++ + G++ KAYE + + + W +L+ +
Sbjct: 349 RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIW------RTLLGAC 402
Query: 342 SYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRD 401
+ + LAE + LQL+ + S D Y +L N + R + ++
Sbjct: 403 TVHG------DSDLAEFARIQILQLEPNHSGD--------YVLLSNMYASEQRWSDVQKI 448
Query: 402 LLYIASDGFLSMPSYTVYDI 421
+ DG +P +++ ++
Sbjct: 449 RKQMLRDGVKKVPGHSLVEV 468
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 44/262 (16%)
Query: 124 RRDSVDKAVGILRAMAERGLS---------PDVDSYNRVISKFCXXXXXXXXXXXXXXXV 174
RR ++ ILR ++E GL P S NRV+ V
Sbjct: 39 RRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARV 98
Query: 175 DKGIFPDA--ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
+ P+ T ++++ +R++EA+ LFREM + VS +T +L A C G
Sbjct: 99 LFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVS-----WTVMLTALCDDGR 153
Query: 233 FTKAFHLHDEMIHKGFLP--DFVTGF-----------------SPAIVTYNALIHGLCFL 273
A L DEM + + VTG S +V++NA+I G
Sbjct: 154 SEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIEN 213
Query: 274 DRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDT 333
D +EEA + M E N V++++++ G+C+ G++ +AY L E ++ I +
Sbjct: 214 DGMEEAKLLFGDMSE----KNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI-----VS 264
Query: 334 YDSLMDSLSYEDTYSSVMNDYL 355
+ +++ ++ + Y + +L
Sbjct: 265 WTAMISGFAWNELYREALMLFL 286
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 104/250 (41%), Gaps = 22/250 (8%)
Query: 66 EVMKCKGLFL-----DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 120
+V + GLF D T++ +I A +LLS+M+ G P TY+ L+
Sbjct: 415 DVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLS 474
Query: 121 AYCRRDSVDKAVGILRAMAERG--LSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGI 178
+ ++D+ I +A+ PD+ N ++S + V K
Sbjct: 475 SAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK-- 532
Query: 179 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 238
D +++S++ L +A +LF+EML G P+ +T+ +L+AC G T+
Sbjct: 533 --DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLE 590
Query: 239 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSY 298
L M P I Y ++I L +++EA E + +P +P+ Y
Sbjct: 591 LFKAMKE-------TYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALP---FTPDHTVY 640
Query: 299 STVISGFCQI 308
++ G C +
Sbjct: 641 GALL-GLCGL 649
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
L R+ +I EA +++E M+ K + +D Y+ + C +++SA ++ ++ G SP
Sbjct: 152 LTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPD 211
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 171
+Y++LV CR V+ A+ ILR M E G++ ++ VI+
Sbjct: 212 SRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYYALGLEFVM 271
Query: 172 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM-LRGGVSPDEL 218
K + D+ ++ L L +R EA + +EM +RG DEL
Sbjct: 272 AYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVMRGLRMGDEL 319
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 72 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK--GFSPSVVTYNSLVFAYCRRDSVD 129
G F + Y +I C L +ID A ++ +M G +PS TY+ ++ + R+ ++
Sbjct: 102 GGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPS--TYHPILCSLTRKYKIE 159
Query: 130 KAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLM 189
+A ++ +M + +S DV +YN ++ C + G PD+ +Y +L+
Sbjct: 160 EAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALV 219
Query: 190 EALCVEQRLSEAFDLFREMLRGGVS 214
C ++ A + R M GV+
Sbjct: 220 LGACRAGKVEAAMAILRRMEEDGVT 244
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 11/175 (6%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
G+ P +TY ++ +L + ++ EA+ + M VS D Y L + C GE A
Sbjct: 139 GLTP--STYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESA 196
Query: 237 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAV 296
+ ++ G PD + Y+AL+ G C +VE A+ ILR M E G++
Sbjct: 197 SEVMRKIEEDGNSPDSRS--------YDALVLGACRAGKVEAAMAILRRMEEDGVTVLYS 248
Query: 297 SYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 351
+++ VI+G + G E + K + LD +++ L L Y M
Sbjct: 249 THAHVITGLVEGGYYALGLEFVMAYAGKDL-RLDSESFGFLAGKLVKRKRYEEAM 302
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 45/271 (16%)
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
P+ Y++L + + +L+ MLR VSP TY+ L+ A F ++
Sbjct: 834 PNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQA 893
Query: 240 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYS 299
H + F GF I T LI R+ EA ++ MPE + ++++
Sbjct: 894 H--------IWKFGFGFHVKIQT--TLIDFYSATGRIREARKVFDEMPER----DDIAWT 939
Query: 300 TVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS--YEDTYSSVMNDYLAE 357
T++S + ++ LD D+ +SL + +S E T + ++N Y+
Sbjct: 940 TMVSAYRRV--------------------LDMDSANSLANQMSEKNEATSNCLINGYMGL 979
Query: 358 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 417
GN+++A L + M + ++++ +I G + R REA + +G + P
Sbjct: 980 GNLEQAESLFNQMP----VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII--PDEV 1033
Query: 418 VYDILLENCSNSEFKSLVELVKDYSMRDLSD 448
++ C++ ++E+ K+ M L +
Sbjct: 1034 TMSTVISACAH---LGVLEIGKEVHMYTLQN 1061
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/336 (18%), Positives = 131/336 (38%), Gaps = 66/336 (19%)
Query: 17 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLK---RLCREGRIPEAEQMLEVMKCK-- 71
NV +YN + +GF T + +SL+ R+ R+ P + ++K
Sbjct: 835 NVFVYNALFKGFVTCS-----------HPIRSLELYVRMLRDSVSPSSYTYSSLVKASSF 883
Query: 72 ---------------GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYN 116
G + +++I ++ +I A + EM + + +
Sbjct: 884 ASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPER----DDIAWT 939
Query: 117 SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 176
++V AY R +D A + M+E+ + + N +I+ + ++
Sbjct: 940 TMVSAYRRVLDMDSANSLANQMSEKNEA----TSNCLINGY----MGLGNLEQAESLFNQ 991
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
D +++++++ +R EA +F +M+ G+ PDE+T + +++AC +G
Sbjct: 992 MPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIG 1051
Query: 237 FHLHDEMIHKGFLPDFVTGFS-----------------------PAIVTYNALIHGLCFL 273
+H + GF+ D G + + +N++I GL
Sbjct: 1052 KEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAH 1111
Query: 274 DRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIG 309
+EAL++ M + PNAV++ +V + G
Sbjct: 1112 GFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG 1147
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 22/280 (7%)
Query: 49 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 108
+K + + EA ++ M+ G+ L+E T ++VI +L I L S I
Sbjct: 145 IKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKL 204
Query: 109 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
V +L+ YC + A + M ER L ++N +++ +
Sbjct: 205 EGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLV----TWNVMLNGYSKAGLIEQAEE 260
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
+K D ++ ++++ + +L EA + EMLR G+ P E+ LL+A
Sbjct: 261 LFDQITEK----DIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASA 316
Query: 229 LVGEFTKAFHLHDEMIHKGF-LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 287
+K LH ++ +GF DF+ +IH + ++ AL+
Sbjct: 317 RSVGSSKGLQLHGTIVKRGFDCYDFLQA---------TIIHFYAVSNDIKLALQQF---- 363
Query: 288 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIW 327
E + + S + +I+GF + G + +A E+ +T DK I+
Sbjct: 364 EASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF 403
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%)
Query: 42 VGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLS 101
+ A L LC++G + EA ++ +M+ KG + Y++V+ FC +KI+ A +
Sbjct: 131 IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFR 190
Query: 102 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 158
+M G +P+ +Y LV + +D AV M E G SP+V ++ ++ C
Sbjct: 191 KMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALC 247
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 11/161 (6%)
Query: 134 ILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 193
I + M E GL P+ + ++ C DKG P+ Y++++EA C
Sbjct: 121 IFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 194 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 253
++ +A +FR+M G++P+ +Y L+ A EM+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLE-------- 229
Query: 254 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
+G SP + T+ L+ LC + VE+A + + + G + N
Sbjct: 230 SGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVN 270
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 203 DLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVT 262
++F++M GG+ P+ + +L+ C G +A L M KG +P+ +V
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPE--------VVI 168
Query: 263 YNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
Y A++ C ++E+A I R M G++PNA SY ++ G
Sbjct: 169 YTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGL 211
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C+ +I +A+++ M+ G+ + +Y ++ N N +D A SEM+ G SP+
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPN 235
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISK 156
V T+ LV A CR V++A + + ++G + +V + + K
Sbjct: 236 VPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDK 280
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
G+ P+A ++++ LC + + EA LF M G P+ + YT ++ A C + A
Sbjct: 129 GLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDA 185
Query: 237 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAV 296
+ +M + G P+ FS Y L+ GL + +++A+ M E G SPN
Sbjct: 186 KRIFRKMQNNGIAPN---AFS-----YGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 297 SYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMD------SLSYEDTY 347
++ ++ C++ + +A + I+T ++ + ++ MD SL++E +
Sbjct: 238 TFVELVDALCRVKGVEQA-QSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIF 293
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%)
Query: 42 VGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLS 101
+ A L LC++G + EA ++ +M+ KG + Y++V+ FC +KI+ A +
Sbjct: 131 IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFR 190
Query: 102 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 158
+M G +P+ +Y LV + +D AV M E G SP+V ++ ++ C
Sbjct: 191 KMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALC 247
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 11/161 (6%)
Query: 134 ILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 193
I + M E GL P+ + ++ C DKG P+ Y++++EA C
Sbjct: 121 IFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 194 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 253
++ +A +FR+M G++P+ +Y L+ A EM+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLE-------- 229
Query: 254 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
+G SP + T+ L+ LC + VE+A + + + G + N
Sbjct: 230 SGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVN 270
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 203 DLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVT 262
++F++M GG+ P+ + +L+ C G +A L M KG +P+ +V
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPE--------VVI 168
Query: 263 YNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
Y A++ C ++E+A I R M G++PNA SY ++ G
Sbjct: 169 YTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGL 211
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 52 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 111
C+ +I +A+++ M+ G+ + +Y ++ N N +D A SEM+ G SP+
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPN 235
Query: 112 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISK 156
V T+ LV A CR V++A + + ++G + +V + + K
Sbjct: 236 VPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDK 280
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 177 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 236
G+ P+A ++++ LC + + EA LF M G P+ + YT ++ A C + A
Sbjct: 129 GLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDA 185
Query: 237 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAV 296
+ +M + G P+ FS Y L+ GL + +++A+ M E G SPN
Sbjct: 186 KRIFRKMQNNGIAPN---AFS-----YGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 297 SYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMD------SLSYEDTY 347
++ ++ C++ + +A + I+T ++ + ++ MD SL++E +
Sbjct: 238 TFVELVDALCRVKGVEQA-QSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIF 293
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 112/257 (43%), Gaps = 23/257 (8%)
Query: 53 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLL--SEMIAKGFSP 110
CR G + EA+ M+ K L T++++I L + DS+ LL ++GF P
Sbjct: 259 CRCGYLSEAKHYFHEMEDKDLI----TWNTLIS---ELERSDSSEALLMFQRFESQGFVP 311
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
+ T+ SLV A +++ + + RG + +V+ N +I +
Sbjct: 312 NCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVF 371
Query: 171 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 230
VD+ + +++S+M +EA +LF +M+ G+ PD + + +L+AC
Sbjct: 372 GEIVDR---RNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHA 428
Query: 231 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 290
G K + M + G +P YN ++ L ++ EA E++ MP
Sbjct: 429 GLVEKGLKYFNVM-------ESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMP--- 478
Query: 291 LSPNAVSYSTVISGFCQ 307
P+ ++ ++ G C+
Sbjct: 479 FKPDESTWGAIL-GACK 494
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 108/272 (39%), Gaps = 33/272 (12%)
Query: 80 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 139
+S++I + A L M + P++ T NSL+ AY + +A+ I +
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLT 447
Query: 140 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 199
+ G +D+ ++ + +K D + +L+ +
Sbjct: 448 KTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGH 507
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 259
A +F EM+R GV+P+E+T+T LNAC H G + + +T F
Sbjct: 508 NALQVFMEMVRSGVTPNEITFTSALNACS----------------HSGLVEEGLTLFRFM 551
Query: 260 IVTYNALI---HGLCFLD------RVEEALEILRGMPEMGLSPNAVSYSTVISGF----- 305
+ Y L H C +D R++EA ++ +P P + + +++
Sbjct: 552 LEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIP---FEPTSTVWGALLAACVTHEN 608
Query: 306 CQIGELGKAYELKIETEDKAIWWLDEDTYDSL 337
Q+GE+ ++E E+ + L + Y +L
Sbjct: 609 VQLGEMAANKLFELEPENTGNYVLLANIYAAL 640
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 93/236 (39%), Gaps = 10/236 (4%)
Query: 80 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM- 138
Y +I + + AH L EMI +G + Y +LV AY R D A +L M
Sbjct: 153 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 212
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
+ PDV +Y+ +I F +GI P+ TY++L++A +
Sbjct: 213 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMF 272
Query: 199 SEAFDLFREML-RGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS 257
E +ML PD T L A G+ EM+ + +G
Sbjct: 273 VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQI--------EMMENCYEKFQSSGIE 324
Query: 258 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGK 313
P I T+N L+ ++ ++ M + S V+Y+ VI F + G+L +
Sbjct: 325 PNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQ 380
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 112/284 (39%), Gaps = 35/284 (12%)
Query: 54 REGRIPEAEQMLEVMK----CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS 109
R GR A +LE MK C+ D TYS +I F + D LLS+M +G
Sbjct: 197 RSGRFDAAFTLLERMKSSHNCQP---DVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIR 253
Query: 110 PSVVTYNSLVFAYCR-RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 168
P+ +TYN+L+ AY + + V+ +++ + E PD + N + F
Sbjct: 254 PNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMEN 313
Query: 169 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 228
GI P+ T++ L+++ + + M + S +TY +++A
Sbjct: 314 CYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFG 373
Query: 229 LVGEFTKAFHLHDEMIHKGFLPDFVT------GFSPA---------------------IV 261
G+ + +L M + P VT + A +V
Sbjct: 374 RAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLV 433
Query: 262 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
+N L+ +++ E +L M + G P+ ++Y T++ +
Sbjct: 434 FFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 111/258 (43%), Gaps = 11/258 (4%)
Query: 59 PE-AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK-GFSPSVVTYN 116
PE A ++ + M +G ++ Y++++ + + D+A TLL M + P V TY+
Sbjct: 166 PEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYS 225
Query: 117 SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV-D 175
L+ ++ + + DK +L M +G+ P+ +YN +I + + +
Sbjct: 226 ILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGE 285
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
PD+ T +S + A ++ + + + G+ P+ T+ LL++ G + K
Sbjct: 286 DDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKK 345
Query: 236 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
+ + M +S IVTYN +I +++ + R M + P+
Sbjct: 346 MSAVMEYMQK--------YHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSC 397
Query: 296 VSYSTVISGFCQIGELGK 313
V+ +++ + + + K
Sbjct: 398 VTLCSLVRAYGRASKADK 415
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 43/241 (17%)
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 239
P+ Y L+ L ++ +A +LF+EM+ G + YT L++A G F AF L
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 240 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYS 299
+ M P + TY+ LI + ++ ++L M G+ PN ++Y+
Sbjct: 208 LERMKSSH-------NCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYN 260
Query: 300 TVISGFCQIGELGKAYELKIETEDKAIWWLDED-------TYDSLMDSLS---------- 342
T+I + GKA ++ +E E I L ED T +S + +
Sbjct: 261 TLIDAY------GKA-KMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMEN 313
Query: 343 -YED-----------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 390
YE T++ +++ Y GN ++ + M + Y + V Y+V+I+
Sbjct: 314 CYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFG 373
Query: 391 K 391
+
Sbjct: 374 R 374
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 89/187 (47%), Gaps = 22/187 (11%)
Query: 180 PDAATYSSLMEALCVEQRLSEAFDLFREMLR-GGVSPDELTYTRLLNACCLVGEFTKAFH 238
P T ++++ A+ +R SE+ LF+ + + P+ ++Y +++NA C G +A
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALE 237
Query: 239 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSY 298
++ ++ F+P+ VTY L GL R+ +A +LR M G + ++ Y
Sbjct: 238 VYRHILANA-------PFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVY 290
Query: 299 STVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEG 358
+ +I G+ +G+ KA E E + K YD +++ ++ M + +G
Sbjct: 291 NNLIRGYLDLGDFDKAVEFFDELKSKCT------VYDGIVN--------ATFMEYWFEKG 336
Query: 359 NMQRALQ 365
N + A++
Sbjct: 337 NDKEAME 343
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 93 IDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRA-MAERGLSPDVDSYN 151
+D+A L + + P+V T N+++ A R +++ + + + + P+V SYN
Sbjct: 161 LDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYN 220
Query: 152 RVISKFCXXXXXXXXXXXXXXXVDKGIF-PDAATYSSLMEALCVEQRLSEAFDLFREMLR 210
++I+ C + F P + TY L + L R+ +A L REML
Sbjct: 221 QIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLS 280
Query: 211 GGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHK 246
G + D Y L+ +G+F KA DE+ K
Sbjct: 281 KGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSK 316
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 20/254 (7%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
G + A ++ + M K L ++SVI F K + A L +EM +KG P T
Sbjct: 37 GDVASAYKVFDKMPEKDLV----AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
SL+ A + ++ + M + GL+ ++ S N ++ + VD
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 152
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG-GVSPDELTYTRLLNACCLVGEFT 234
K ++ +++SL+ L V EA +LF+ M G+ P E+T+ +L AC G
Sbjct: 153 K----NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVK 208
Query: 235 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPN 294
+ F M + P I + ++ L +V++A E ++ MP + PN
Sbjct: 209 EGFEYFRRMREE-------YKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP---MQPN 258
Query: 295 AVSYSTVISGFCQI 308
V + T++ G C +
Sbjct: 259 VVIWRTLL-GACTV 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 133/353 (37%), Gaps = 51/353 (14%)
Query: 96 AHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVIS 155
T+ S +I GF + NSL+ Y V A + M E+ D+ ++N VI+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK----DLVAWNSVIN 62
Query: 156 KFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSP 215
F KGI PD T SL+ A L+ + M++ G++
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 216 DELTYTRLLNACCLVGEFTKAFHLHDEMIHK---------------GFLPDFV------- 253
+ + LL+ G +A L DEM+ K GF + +
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 254 --TGFSPAIVTYNALIHGLCFLDRVEEALEILRGM-PEMGLSPNAVSYSTVISGFCQIGE 310
G P +T+ +++ V+E E R M E + P + ++ + G+
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 311 LGKAYEL--KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDH 368
+ KAYE + + + W +L+ + + + LAE + LQL+
Sbjct: 243 VKKAYEYIKSMPMQPNVVIW------RTLLGACTVHG------DSDLAEFARIQILQLEP 290
Query: 369 DMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDI 421
+ S D Y +L N + R + ++ + DG +P +++ ++
Sbjct: 291 NHSGD--------YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV 335
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 117/276 (42%), Gaps = 46/276 (16%)
Query: 81 SSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAE 140
+++IG + ++ A + EM P++V +N+++ A R + V A I M
Sbjct: 145 TTLIGMYGGCGCVEFARKVFDEM----HQPNLVAWNAVITACFRGNDVAGAREIFDKMLV 200
Query: 141 RGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSE 200
R + S+N +++ + + D ++S+++ + +E
Sbjct: 201 RNHT----SWNVMLAGYIKAGELESAKRIFSEMPHR----DDVSWSTMIVGIAHNGSFNE 252
Query: 201 AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF---------LPD 251
+F FRE+ R G+SP+E++ T +L+AC G F LH + G+ L D
Sbjct: 253 SFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALID 312
Query: 252 FVT--GFSP-------------AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAV 296
+ G P IV++ ++I GL + EEA+ + M G++P+ +
Sbjct: 313 MYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGI 372
Query: 297 SYSTVISGFCQIG----------ELGKAYELKIETE 322
S+ +++ G E+ + Y ++ E E
Sbjct: 373 SFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIE 408
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 144/365 (39%), Gaps = 81/365 (22%)
Query: 200 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 259
E+ LFREM RGG P+ T+ + AC + + +H +I F D G
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVG---- 90
Query: 260 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKI 319
A + + V+ A ++ MPE +A +++ ++SGFCQ G KA+ L
Sbjct: 91 ----TATVDMFVKCNSVDYAAKVFERMPER----DATTWNAMLSGFCQSGHTDKAFSLFR 142
Query: 320 ETEDKAIWWLDEDTYDS-----LMDSLSYE------------------DTYSSVMNDYLA 356
E L+E T DS L+ S S+E D +V N +++
Sbjct: 143 EMR------LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIS 196
Query: 357 E----GNMQRALQLDHDMSRD-----GYLSSYVAYSVLIN-----GLHKKARTREAKRDL 402
G++ A + + R + S + AYSV GL+ E K DL
Sbjct: 197 TYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDL 256
Query: 403 LYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 462
+ + L +C N E + L+ +++ +D A T + + +
Sbjct: 257 --------------STFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYS 302
Query: 463 KTDGENKTDGGMYNLLIFEHCRSHNV-----------HKAYNMYMEMVHYGHAPHMFSVL 511
K++ + + +++++ C S V +A ++ M+ G P + ++L
Sbjct: 303 KSE-DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLL 361
Query: 512 ALISA 516
+LIS
Sbjct: 362 SLISG 366
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 108/265 (40%), Gaps = 37/265 (13%)
Query: 76 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 135
D T+++++ FC D A +L EM +P VT +L+ + S +K++ +L
Sbjct: 117 DATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLI----QSASFEKSLKLL 172
Query: 136 RAMAERGLSPDVDSY----NRVISKF--CXXXXXXXXXXXXXXXVDKGIFPDAATYSSLM 189
AM G+ VD N IS + C D+ + +++S+
Sbjct: 173 EAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTV----VSWNSMF 228
Query: 190 EALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFL 249
+A V +AF L+ MLR PD T+ L +C T+ +H IH G
Sbjct: 229 KAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTD 288
Query: 250 PD------FVTGFSPA-----------------IVTYNALIHGLCFLDRVEEALEILRGM 286
D F++ +S + V++ +I G ++EAL + M
Sbjct: 289 QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM 348
Query: 287 PEMGLSPNAVSYSTVISGFCQIGEL 311
+ G P+ V+ ++ISG + G L
Sbjct: 349 IKSGEKPDLVTLLSLISGCGKFGSL 373
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 109/262 (41%), Gaps = 26/262 (9%)
Query: 56 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 115
G + EA+ + VMK K D +++S+I +I A+ L +M K +V++
Sbjct: 324 GYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSW 375
Query: 116 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 175
++ + + + K V + M E+ D ++ +IS F +
Sbjct: 376 TDMIKGFSGKGEISKCVELFGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQ 431
Query: 176 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 235
K + P++ T+SS++ A L E + +++ + D L++ C G
Sbjct: 432 KEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTND 491
Query: 236 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
A+ + F P IV+YN +I G + ++AL++ + G PN
Sbjct: 492 AYKI------------FSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNG 539
Query: 296 VSYSTVISGFCQIG--ELGKAY 315
V++ ++S +G +LG Y
Sbjct: 540 VTFLALLSACVHVGYVDLGWKY 561
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 20/205 (9%)
Query: 113 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 172
V++NSL+ +R + +A + M + D+ S+ +I F
Sbjct: 342 VSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGM 397
Query: 173 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 232
+K D T+++++ A EA F +ML+ V P+ T++ +L+A + +
Sbjct: 398 MPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLAD 453
Query: 233 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
+ +H ++ + D + N+L+ C +A +I + E
Sbjct: 454 LIEGLQIHGRVVKMNIVND--------LSVQNSLVSMYCKCGNTNDAYKIFSCISE---- 501
Query: 293 PNAVSYSTVISGFCQIGELGKAYEL 317
PN VSY+T+ISG+ G KA +L
Sbjct: 502 PNIVSYNTMISGYSYNGFGKKALKL 526
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 120/278 (43%), Gaps = 21/278 (7%)
Query: 48 SLKRLCREGRIPEAEQMLEVMKC-KGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 106
+L ++C E + + + + C GL +D S+ + ++ A + M K
Sbjct: 121 NLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK 180
Query: 107 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 166
VVT ++L+ AY R+ +++ V IL M G+ ++ S+N ++S F
Sbjct: 181 ----DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEA 236
Query: 167 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 226
G PD T SS++ ++ + L+ + +++ G+ D+ + +++
Sbjct: 237 VVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDM 296
Query: 227 CCLVGEFTKAFHLHD--EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 284
G L + EM+ G ++TG S N L V++ALE+
Sbjct: 297 YGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS-----RNGL---------VDKALEMFE 342
Query: 285 GMPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETE 322
E + N VS++++I+G Q G+ +A EL E +
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQ 380
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 118/313 (37%), Gaps = 59/313 (18%)
Query: 52 LC-REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 110
LC R + E E++ VMK G E TYS ++ F + + A + EM+ S
Sbjct: 223 LCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISL 282
Query: 111 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 170
+++ A + + D A+ I ++M ++G+ P++ + N +I+
Sbjct: 283 REDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVY 342
Query: 171 XXXVDKGIFPDAATYSSLMEAL----------------------CVEQRL---------- 198
G PD T+++L+ AL C+ + L
Sbjct: 343 SVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQK 402
Query: 199 ----SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 254
+A L EM G++ +Y +++AC + A +++ M + P+ T
Sbjct: 403 LGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFT 462
Query: 255 GFS----------------------PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 292
S P + YNA IHG+C + A E+ M EMGL
Sbjct: 463 YLSLVRSCIWGSLWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLE 522
Query: 293 PNAVSYSTVISGF 305
P+ + + ++
Sbjct: 523 PDGKTRAMMLQNL 535
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 147/359 (40%), Gaps = 49/359 (13%)
Query: 74 FLDER---TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDK 130
FL+ER T S + L+K+ SA L M G P+ NS + R + K
Sbjct: 101 FLEERNEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQK 160
Query: 131 AVGILRAMAERGLSPDVDSYN-----RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 185
A + M ++ +V + + +++ + D Y
Sbjct: 161 AFTVFEFMRKK---ENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLY 217
Query: 186 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 245
++ + + E ++R M G E+TY+ L++ G A ++DEM++
Sbjct: 218 NTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVN 277
Query: 246 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNAVSYSTVISGF 305
+ ++ A+ A+I ++ + AL+I + M + G+ PN V+ +T+I+
Sbjct: 278 -----NKISLREDAMY---AMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSL 329
Query: 306 CQIGELG---KAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV------------ 350
+ G++G K Y + K DE T+++L+ +L + Y V
Sbjct: 330 GKAGKVGLVFKVYSVLKSLGHKP----DEYTWNALLTALYKANRYEDVLQLFDMIRSENL 385
Query: 351 --MNDYLAE---------GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 398
+N+YL G ++A++L ++M G S +Y+++I+ K +++ A
Sbjct: 386 CCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVA 444
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 99/262 (37%), Gaps = 31/262 (11%)
Query: 79 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 138
TY SV + L + L +I +G N+++ Y + +A I M
Sbjct: 128 TYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM 187
Query: 139 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 198
+ DV ++N +I F + + +++S++ R
Sbjct: 188 ----IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRF 239
Query: 199 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF---------- 248
+A D+FREM V PD T LLNAC +G + +H+ ++ F
Sbjct: 240 KDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTAL 299
Query: 249 -------------LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPNA 295
L F + +N++I GL E A+++ + GL P++
Sbjct: 300 IDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDS 359
Query: 296 VSYSTVISGFCQIGELGKAYEL 317
VS+ V++ GE+ +A E
Sbjct: 360 VSFIGVLTACAHSGEVHRADEF 381