Miyakogusa Predicted Gene
- Lj3g3v1918700.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1918700.1 Non Chatacterized Hit- tr|F6HNJ9|F6HNJ9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,24.57,0.00000000000005,PPR,Pentatricopeptide repeat; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR_1,Pentatricopepti,CUFF.43302.1
(338 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 226 2e-59
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 7e-12
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 7e-12
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 8e-12
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 4e-11
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 65 7e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 62 6e-10
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 6e-10
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 8e-10
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 1e-09
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 4e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 59 6e-09
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 59 7e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 58 8e-09
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 56 4e-08
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 5e-08
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 8e-08
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 8e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 51 1e-06
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 50 2e-06
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 50 3e-06
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 7e-06
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 7e-06
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/315 (42%), Positives = 189/315 (60%), Gaps = 33/315 (10%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS--- 57
M E GLSP+ VSYSTV+SGFC+ ++ +A +K E +K I D TY SL+
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP-DTITYSSLIQGFCEQR 499
Query: 58 --------YED-----------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
YE+ TY++++N Y EG++++ALQL ++M G L V YS
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSM 158
VLINGL+K++RTREAKR LL + + S+PS Y L+ENCSN EFKS+V L+K + M
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEE--SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCM 617
Query: 159 RDLSDDAATAHTTMLHLKNKTDGEN-KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYG 217
+ + +A +ML G+N K DG YN++I HCR+ ++ KAY +Y EMV G
Sbjct: 618 KGMMTEADQVFESML-------GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 218 HAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALL 277
H +V+AL+ AL + NE++ VI + LRSC LS++EQ KVL EIN + + +L
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVL 730
Query: 278 DVLAEMAMDSLLLDG 292
DVLAEMA D L +G
Sbjct: 731 DVLAEMAKDGFLPNG 745
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 120/293 (40%), Gaps = 72/293 (24%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
GL PN +SY+ VI+G C+ G + + + E + + LDE TY++L+
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG-YSLDEVTYNTLIKG--------- 319
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYV----------------------------- 95
Y EGN +AL + +M R G S +
Sbjct: 320 ----YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 96 ------AYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE-NCSNSEFKS 148
Y+ L++G +K EA R L + +GF PS Y+ L+ +C + +
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF--SPSVVTYNALINGHCVTGKMED 433
Query: 149 LVELVKDYSMRDLSDDAATAHTTM------------LHLKNK-TDGENKTDGGMYNLLIF 195
+ +++D + LS D + T + L +K + + K D Y+ LI
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 196 EHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA--LDDD-----RMYNEM 241
C +A ++Y EM+ G P F+ ALI+A ++ D +++NEM
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 27/190 (14%)
Query: 46 EDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 103
E+ + +++S + TY+ ++ + GN+ AL L M G L + V Y+ LI+G
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 104 LHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLS 162
K + + + L +A G P+ Y++++ C K + ++ + + R S
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGL--EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 163 DDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM 222
D T YN LI +C+ N H+A M+ EM+ +G P +
Sbjct: 308 LDEVT----------------------YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345
Query: 223 FSVLALISAL 232
+ +LI ++
Sbjct: 346 ITYTSLIHSM 355
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 105/269 (39%), Gaps = 41/269 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMD------ 54
M E +SPN +Y+ +I GFC G + A L + E K + TY++L+D
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP-NVVTYNTLIDGYCKLR 254
Query: 55 ----------SLSYED------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
S++ + +Y+ V+N EG M+ + +M+R GY V Y+
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYS 157
LI G K+ +A + G PS Y L+ + C +E +
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGL--TPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 158 MRDLSDDAATAHTTMLH--------------LKNKTDGENKTDGGMYNLLIFEHCRSHNV 203
+R L + T +TT++ L+ D YN LI HC + +
Sbjct: 373 VRGLCPNERT-YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 204 HKAYNMYMEMVHYGHAPHMFSVLALISAL 232
A + +M G +P + S ++S
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 112/264 (42%), Gaps = 41/264 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL---- 56
+ E G SPN V Y+T+I G C+ GE+ KA +L E K +E TY L++ L
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM-GKLGLVANERTYTVLINGLFKNG 247
Query: 57 -------SYED-----------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
YE TY+ VMN +G + A Q+ +M G + V Y+
Sbjct: 248 VKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYN 307
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYS 157
LI GL ++ + EA + + + SDG P+ Y+ L++ C + + L +D
Sbjct: 308 TLIGGLCREMKLNEANKVVDQMKSDGI--NPNLITYNTLIDGFCGVGKLGKALSLCRDLK 365
Query: 158 MRDLSDDAATAHTTM--LHLKNKTDGENKTDGGM-----------YNLLIFEHCRSHNVH 204
R LS T + + K T G K M Y +LI RS N+
Sbjct: 366 SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425
Query: 205 KAYNMYMEMVHYGHAP--HMFSVL 226
KA + + M G P H +SVL
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVL 449
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 32/266 (12%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E G+S N V+Y+T+I G C+ E+K+ +K + D+ D + +L
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCR--------EMKLNEANKVV---DQMKSDGINPNLI--- 339
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TY+++++ + G + +AL L D+ G S V Y++L++G +K T A + + +
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 121 ASDGFLSMPSYTVYDILLENCSNSE-FKSLVELVKDYSMRDLSDDAATAHTTMLH----- 174
G PS Y IL++ + S+ + ++L L D T ++ ++H
Sbjct: 400 EERGI--KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT-YSVLIHGFCIK 456
Query: 175 ---------LKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 225
K+ + + + +YN +I +C+ + ++A + EM AP++ S
Sbjct: 457 GQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASY 516
Query: 226 LALISALDDDRMYNEMSWVINNTLRS 251
+I L +R E ++ + S
Sbjct: 517 RYMIEVLCKERKSKEAERLVEKMIDS 542
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 108/254 (42%), Gaps = 49/254 (19%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED---- 60
G++PN ++Y+T+I GFC +G+LGKA L + + + + TY+ L+ +
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP-SLVTYNILVSGFCRKGDTSG 391
Query: 61 ------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 102
TY+ +++ + NM++A+QL M G + YSVLI+
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 103 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYD-ILLENCSNSEFKSLVELVKDYSMRDL 161
G K + EA R + P+ +Y+ ++L C ++L+K+ ++L
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKN--CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Query: 162 SDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPH 221
+ + A+ Y +I C+ +A + +M+ G P
Sbjct: 510 APNVAS----------------------YRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Query: 222 MFSVLALISALDDD 235
S+L+LIS +D
Sbjct: 548 T-SILSLISRAKND 560
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 118/308 (38%), Gaps = 71/308 (23%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M EMG P+ V Y+T+I G C+IG + A EL E + D TY+SL+ L
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVR-ADAVTYNSLVAGLCCSG 223
Query: 61 ----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
T+++V++ ++ EG A++L +M+R Y+
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYS 157
LINGL R EAK+ L + + G L P Y+ L+ C + +L ++ +
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCL--PDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 158 MRDLSDDAATAHT---------------------------------------------TM 172
R L D T +T +
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKAL 401
Query: 173 LHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
+ +N E + D YN++I C+ NV A++++ + G P + S +IS
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Query: 233 DDDRMYNE 240
R +++
Sbjct: 462 CRKRQWDK 469
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 115/272 (42%), Gaps = 40/272 (14%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + +SPN V++S +I F + G+L +A +L E + I + TY+SL+D E+
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP-NTITYNSLIDGFCKEN 382
Query: 61 ----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
T++ ++N Y + L+L +MS G +++ V Y+
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 442
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYS 157
L+ G + + AK+ + S P Y ILL+ C N E + +E+
Sbjct: 443 TLVQGFCQSGKLEVAKKLFQEMVSRRV--RPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 158 MRDLSDDAATAHTTMLHLKNKTDGEN-------------KTDGGMYNLLIFEHCRSHNVH 204
+ D + + N + ++ K D YN++I E CR ++
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560
Query: 205 KAYNMYMEMVHYGHAPHMFSVLALISA-LDDD 235
KA ++ +M GHAP + LI A L DD
Sbjct: 561 KADILFRKMTEEGHAPDELTYNILIRAHLGDD 592
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 48/258 (18%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS--- 57
M E + +AV YS +I G C+ G L A+ L E E K + D TY++L+
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIITYNTLIGGFCNAG 312
Query: 58 -YED------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
++D T+S +++ ++ EG ++ A QL +M + G + + Y+
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYS 157
LI+G K+ R EA + + + S G P ++IL+ C + +EL ++ S
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKG--CDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 158 MRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYG 217
+R + + T YN L+ C+S + A ++ EMV
Sbjct: 431 LRGVIANTVT----------------------YNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 218 HAPHMFSVLALISALDDD 235
P + S L+ L D+
Sbjct: 469 VRPDIVSYKILLDGLCDN 486
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 129/316 (40%), Gaps = 56/316 (17%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDED----TYDSLMDSL 56
M + G SPN V+Y+T+I G C+ G+L A EL E +W + TY+S+++ L
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE-----MWKIGLQPNIFTYNSIVNGL 501
Query: 57 SYED----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 94
TY+++M+ Y G M +A ++ +M G +
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 95 VAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELV 153
V ++VL+NG + ++ L ++ + G P+ T ++ L++ C + K+ +
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI--APNATTFNSLVKQYCIRNNLKAATAIY 619
Query: 154 KDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 213
KD R + D T Y L+ HC++ N+ +A+ ++ EM
Sbjct: 620 KDMCSRGVGPDGKT----------------------YENLVKGHCKARNMKEAWFLFQEM 657
Query: 214 VHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEI 273
G + + + LI + + E V + R +D E S+
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRP 717
Query: 274 YALLDVLAEMAMDSLL 289
++D + E+ + L+
Sbjct: 718 DTIVDPIDEIIENYLV 733
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 6 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 65
++P+ ++Y+ +ISGFCQIG++ +A +L E K L+ D+ T++ +
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG---LEPDSV-----------TFTEL 427
Query: 66 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 125
+N Y G+M+ A ++ + M + G + V Y+ LI+GL K+ A L + G
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 126 LSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENK 184
P+ Y+ ++ C + + V+LV ++ L+ D T
Sbjct: 488 --QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT----------------- 528
Query: 185 TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
Y L+ +C+S + KA + EM+ G P + + L++
Sbjct: 529 -----YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 101/246 (41%), Gaps = 30/246 (12%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
PE+G+ N SY+ VI CQ+G + +A+ L + E K T D +
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY------TPDVI-------- 282
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
+YS+V+N Y G + + +L M R G + Y +I L + + EA+ +
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
G L P VY L++ C + ++ + + RD++ D T +
Sbjct: 343 IRQGIL--PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 180 DGEN-------------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 226
D + D + LI +C++ ++ A+ ++ M+ G +P++ +
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 227 ALISAL 232
LI L
Sbjct: 461 TLIDGL 466
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 129/316 (40%), Gaps = 56/316 (17%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDED----TYDSLMDSL 56
M + G SPN V+Y+T+I G C+ G+L A EL E +W + TY+S+++ L
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE-----MWKIGLQPNIFTYNSIVNGL 501
Query: 57 SYED----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 94
TY+++M+ Y G M +A ++ +M G +
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 95 VAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELV 153
V ++VL+NG + ++ L ++ + G P+ T ++ L++ C + K+ +
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI--APNATTFNSLVKQYCIRNNLKAATAIY 619
Query: 154 KDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 213
KD R + D T Y L+ HC++ N+ +A+ ++ EM
Sbjct: 620 KDMCSRGVGPDGKT----------------------YENLVKGHCKARNMKEAWFLFQEM 657
Query: 214 VHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEI 273
G + + + LI + + E V + R +D E S+
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRP 717
Query: 274 YALLDVLAEMAMDSLL 289
++D + E+ + L+
Sbjct: 718 DTIVDPIDEIIENYLV 733
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 6 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 65
++P+ ++Y+ +ISGFCQIG++ +A +L E K L+ D+ T++ +
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG---LEPDSV-----------TFTEL 427
Query: 66 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 125
+N Y G+M+ A ++ + M + G + V Y+ LI+GL K+ A L + G
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 126 LSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENK 184
P+ Y+ ++ C + + V+LV ++ L+ D T
Sbjct: 488 --QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT----------------- 528
Query: 185 TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
Y L+ +C+S + KA + EM+ G P + + L++
Sbjct: 529 -----YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 101/246 (41%), Gaps = 30/246 (12%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
PE+G+ N SY+ VI CQ+G + +A+ L + E K T D +
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY------TPDVI-------- 282
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
+YS+V+N Y G + + +L M R G + Y +I L + + EA+ +
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
G L P VY L++ C + ++ + + RD++ D T +
Sbjct: 343 IRQGIL--PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 180 DGEN-------------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 226
D + D + LI +C++ ++ A+ ++ M+ G +P++ +
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 227 ALISAL 232
LI L
Sbjct: 461 TLIDGL 466
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 25/161 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M GL P+ ++Y+T+I GFC+ G++ A E++ E + I LD + +L+ + E
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIE-LDRVGFSALVCGMCKEG 464
Query: 61 ----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
TY+ +M+ + +G+ Q +L +M DG++ S V Y+
Sbjct: 465 RVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN 524
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 139
VL+NGL K + + A D+L A +P Y+ LLE
Sbjct: 525 VLLNGLCKLGQMKNA--DMLLDAMLNIGVVPDDITYNTLLE 563
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 107/285 (37%), Gaps = 45/285 (15%)
Query: 6 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 65
L P VS++T+I+G+C++G L + + LK + E D + TYS++
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTR---PDVF-----------TYSAL 316
Query: 66 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 125
+N E M A L +M + G + + V ++ LI+G +R + DL+ +
Sbjct: 317 INALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG-----HSRNGEIDLMKESYQKM 371
Query: 126 LS---MPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDG 181
LS P +Y+ L+ C N + + +V R L D T
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT-------------- 417
Query: 182 ENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEM 241
Y LI CR +V A + EM G AL+ + + +
Sbjct: 418 --------YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 242 SWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEMAMD 286
+ LR+ D ++ + K + +L EM D
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD 514
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 77/152 (50%), Gaps = 17/152 (11%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
GL P+ V Y+T+++GFC+ G+L A + ++ + D+ TY +L+D
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNI-VDGMIRRGLRPDKITYTTLIDG--------- 424
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 124
+ G+++ AL++ +M ++G V +S L+ G+ K+ R +A+R L + G
Sbjct: 425 ----FCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 125 FLSMPSYTVYDILLEN-CSNSEFKSLVELVKD 155
P Y ++++ C + ++ +L+K+
Sbjct: 481 I--KPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 113/254 (44%), Gaps = 41/254 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDS-LSYE 59
M ++GL PN V+YS +I FC+ G+L A E D + L Y+SL++ +
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK-LSVYPYNSLINGHCKFG 451
Query: 60 D---------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
D TY+S+M Y ++G + +AL+L H+M+ G S ++
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYS 157
L++GL + R+A + L+ + P+ Y++++E C + E +K+ +
Sbjct: 512 TLLSGLFRAGLIRDAVK--LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 158 MRDLSDDAATAHTTMLH----------LKNKTDGENKTDGGM----YNLLIFEHCRSHNV 203
+ + D + + ++H K DG +K + + Y L+ CR +
Sbjct: 570 EKGIVPDTYS-YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 204 HKAYNMYMEMVHYG 217
+A ++ EMV G
Sbjct: 629 EEALSVCQEMVQRG 642
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 37/217 (17%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
G PN V+Y+ VI+G C+ G + +A E+ ++ TY +D L+
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEA-EVLCSKMQPVSSVPNQVTYGCFLDILTK------ 764
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 124
E +MQ+A++L H+ G L++ Y++LI G ++ R EA + + DG
Sbjct: 765 ------GEVDMQKAVEL-HNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDG 817
Query: 125 FLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENK 184
+S T ++ E C ++ K +EL + + + D
Sbjct: 818 -VSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVA----------------- 859
Query: 185 TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPH 221
YN LI C + + KA + EM+ G P+
Sbjct: 860 -----YNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 91/226 (40%), Gaps = 63/226 (27%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSY-- 58
M E + PN V+Y+ +I G+C+ G++ KA+E E +K I D +Y L+ L
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP-DTYSYRPLIHGLCLTG 591
Query: 59 --------------------EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
E Y+ +++ + EG ++ AL + +M + G V Y
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 99 VLING-LHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYS 157
VLI+G L K R K L+K+
Sbjct: 652 VLIDGSLKHKDR-------------------------------------KLFFGLLKEMH 674
Query: 158 MRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNV 203
R L D +T+M+ K+KT G+ K G+++L+I E C + V
Sbjct: 675 DRGLKPDDVI-YTSMIDAKSKT-GDFKEAFGIWDLMINEGCVPNEV 718
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 43/261 (16%)
Query: 6 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 65
L P+ V+Y T++ G C++ E +E+ +E D+ + L S S E SS+
Sbjct: 293 LKPDVVTYCTLVYGLCKVQE----FEIGLEMMDEML---------CLRFSPS-EAAVSSL 338
Query: 66 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 125
+ G ++ AL L + G + Y+ LI+ L K + EA +LL+
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA--ELLFDRMGKI 396
Query: 126 LSMPSYTVYDILLEN-CSNSEFKSLVELVKD----------YSMRDLSD------DAATA 168
P+ Y IL++ C + + + + + Y L + D + A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 169 HTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLAL 228
M + NK Y L+ +C ++KA +Y EM G AP +++ L
Sbjct: 457 EGFMAEMINKKLEPTVV---TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513
Query: 229 ISAL-------DDDRMYNEMS 242
+S L D +++NEM+
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMA 534
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 122/302 (40%), Gaps = 49/302 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
MP+ G P++ +Y T+ISG C+ G + +A +L E +K D
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK--------------DCAPTVV 228
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TY+S++N N+ A++ +M G + YS L++GL K R+ +A +
Sbjct: 229 TYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMM 288
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
+ G P+ Y L+ C + + VEL+ +++ L
Sbjct: 289 MARG--CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGL------------------ 328
Query: 180 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP-------HMFSVLALISAL 232
K D G+Y +I C +A N EM+ G P H+ + ++ L
Sbjct: 329 ----KPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGL 384
Query: 233 DDDRMYNEMSWVINNTLRSCNLS-DSEQLKVLSEINVTKSEIYALLDVLAEMAMDSLLLD 291
+ Y ++ + ++RS +S + E L+ L + K E + ++ E+ D +
Sbjct: 385 CAN--YPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPS 442
Query: 292 GG 293
G
Sbjct: 443 KG 444
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 105/255 (41%), Gaps = 48/255 (18%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + G PN V Y+T+I G C+ GEL A EL E E K + D TY++L+ L Y
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA-DVVTYNTLLTGLCYSG 225
Query: 61 ----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
T++++++ ++ +GN+ A +L +M + + V Y+
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYS 157
+INGL R +AK+ +AS G P+ Y+ L+ C ++L + S
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKG--CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 158 MRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYG 217
+ D T YN LI +C+ + A +++ MV
Sbjct: 344 CEGFNADIFT----------------------YNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 218 HAPHMFSVLALISAL 232
P + + L+ L
Sbjct: 382 VTPDIITHCILLHGL 396
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 43/243 (17%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M ++G P+ V++ +++ GFC + +G A+ L I LM YE
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI-----------------LMVKSGYEP 174
Query: 61 ---TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL 117
Y+++++ G + AL+L ++M + G + V Y+ L+ GL R +A R L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 118 LYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 177
+++ N + + L+ + + D+A + M+ ++
Sbjct: 235 -----------------RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI--QS 275
Query: 178 KTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 237
D N T + N L H R ++ K +++ M G P++ + LIS RM
Sbjct: 276 SVDPNNVTYNSIINGLCM-HGRLYDAKKTFDL---MASKGCFPNVVTYNTLISGFCKFRM 331
Query: 238 YNE 240
+E
Sbjct: 332 VDE 334
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 48/258 (18%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS--- 57
M MG PN V Y+T+I G C+ ++ A +L E I D TY+SL+ L
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI-GPDVVTYNSLISGLCSSG 235
Query: 58 -----------------YED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
Y D T++++++ + EG + A + +M R V YS
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYS 157
+LI GL +R EA+ ++ S G P Y IL+ C + + + ++L + S
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKG--CFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 158 MRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYG 217
R + + T Y +LI +CR+ ++ A ++ MV G
Sbjct: 354 QRGVVRNTVT----------------------YTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 218 HAPHMFSVLALISALDDD 235
P++ + L+ L D+
Sbjct: 392 VHPNIITYNVLLHGLCDN 409
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 95/235 (40%), Gaps = 43/235 (18%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M L P+ V+YS +I G C L +A E+ + ++ + D
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEA----------------EEMFGFMVSKGCFPD 325
Query: 61 --TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 118
TYS ++N Y ++ ++L +MS+ G + + V Y++LI G + + A+
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Query: 119 YIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 177
+ G P+ Y++LL C N + + + ++ D + D T
Sbjct: 386 RMVFCGV--HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVT---------- 433
Query: 178 KTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
YN++I C++ V A+++Y + G P +++ ++ L
Sbjct: 434 ------------YNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 124/303 (40%), Gaps = 34/303 (11%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED--TY 62
G+ N + + +++ C+ G++ K + ++K + Y D TY
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGV----------------YPDIVTY 273
Query: 63 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 122
+++++ Y ++G M+ A +L + M G+ Y+ +INGL K + AK +
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 123 DGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGE 182
G LS S T +L+E C + ++ D RD+ D ++M+ L ++
Sbjct: 334 SG-LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV-CFSSMMSLFTRSGNL 391
Query: 183 NKT--------------DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLAL 228
+K D +Y +LI +CR + A N+ EM+ G A + + +
Sbjct: 392 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451
Query: 229 ISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEMAMDSL 288
+ L +M E + N DS L +L + + + +++ +M +
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 289 LLD 291
LD
Sbjct: 512 RLD 514
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 39/226 (17%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E L P++ + + +I G C++G L A EL + ++K I LD TY++L+D
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR-LDVVTYNTLLDGFG--- 526
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
G++ A ++ DM L + ++YS+L+N L K EA
Sbjct: 527 ----------KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA------- 569
Query: 121 ASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD 180
+ V+D ++ ++K Y + D + M+ ++
Sbjct: 570 ----------FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI-----SE 614
Query: 181 GENKTDGGMYNLLIFEHCRSHNVHKAYNMY--MEMVHYGHAPHMFS 224
G D YN LI+ R N+ KA+ + ME G P +F+
Sbjct: 615 G-FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 118/296 (39%), Gaps = 45/296 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLM------- 53
MP G SP +Y+TVI+G C+ G+ +A E+ E + D TY SL+
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP-DSTTYRSLLMEACKKG 354
Query: 54 DSLSYEDT---------------YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
D + E +SS+M+ + GN+ +AL + + G + V Y+
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSM 158
+LI G +K A + G +M T IL C +L + +
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQG-CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Query: 159 RDLSDDAAT------AHTTMLHLKNK-------TDGENKTDGGMYNLLIFEHCRSHNVHK 205
R L D+ T H + +L+N + + D YN L+ + ++
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533
Query: 206 AYNMYMEMVHYGHAPHMFSVLALISAL-------DDDRMYNEM-SWVINNTLRSCN 253
A ++ +MV P S L++AL + R+++EM S I T+ CN
Sbjct: 534 AKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 30/244 (12%)
Query: 3 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 62
E+ +PN+VSYS +I G C++G L +A+ LK + +K TY
Sbjct: 259 EVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ--------------PSTRTY 304
Query: 63 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 122
+ ++ G + +A L +M G + Y+VLI+GL + + EA +
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 123 DGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM--------- 172
D PS Y+ L+ C + EL+ R + T + M
Sbjct: 365 DRIF--PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 173 ---LH-LKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLAL 228
+H LK D D YN+LI CR +++ AY + M + P + A+
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 229 ISAL 232
I+A
Sbjct: 483 INAF 486
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 117/270 (43%), Gaps = 44/270 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL---- 56
M ++G PN ++++++I G C+ G + +A+E+ +E + W + T+ +L+D L
Sbjct: 278 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEM-LEEMVRNGWKPNVYTHTALIDGLCKRG 336
Query: 57 ----------------SYED---TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAY 97
+Y+ TY+S++ Y E + RA L M G + Y
Sbjct: 337 WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTY 396
Query: 98 SVLINGLHKKARTREAKRDLLYIASD-GFLSMPSYTVYDILLEN-CSNSEFKSLVELVKD 155
+ LING H KA + +L+ + D GF MP+ Y+ +++ C S EL+
Sbjct: 397 TTLING-HCKAGSFGRAYELMNLMGDEGF--MPNIYTYNAAIDSLCKKSRAPEAYELLNK 453
Query: 156 YSMRDLSDDAATAHTTMLHLKNKTDGENK--------------TDGGMYNLLIFEHCRSH 201
L D T +T ++ + K + N+ D + N+LI CR
Sbjct: 454 AFSCGLEADGVT-YTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 512
Query: 202 NVHKAYNMYMEMVHYGHAPHMFSVLALISA 231
+ ++ ++ +V G P + ++IS
Sbjct: 513 KMKESERLFQLVVSLGLIPTKETYTSMISC 542
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 101/249 (40%), Gaps = 29/249 (11%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
G P +SY+T+I +CQ E K YE+ E E S +S+ TY++
Sbjct: 254 GFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG----------SPPNSI----TYTT 299
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 124
+M+ A+ + AL++ M R G + Y+ LI+ L + R EA+R +
Sbjct: 300 IMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPEL 359
Query: 125 FLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK------ 178
+S+ + T ++ C + E +EL+K+ +L + + +L K
Sbjct: 360 GVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVE 419
Query: 179 ---------TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 229
T D Y LI CR++ AY ++ EM+ P + L L+
Sbjct: 420 VGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479
Query: 230 SALDDDRMY 238
+ M+
Sbjct: 480 EEVKKKNMH 488
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 101/249 (40%), Gaps = 29/249 (11%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
G P +SY+T+I +CQ E K YE+ E E S +S+ TY++
Sbjct: 254 GFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG----------SPPNSI----TYTT 299
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 124
+M+ A+ + AL++ M R G + Y+ LI+ L + R EA+R +
Sbjct: 300 IMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPEL 359
Query: 125 FLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK------ 178
+S+ + T ++ C + E +EL+K+ +L + + +L K
Sbjct: 360 GVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVE 419
Query: 179 ---------TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 229
T D Y LI CR++ AY ++ EM+ P + L L+
Sbjct: 420 VGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479
Query: 230 SALDDDRMY 238
+ M+
Sbjct: 480 EEVKKKNMH 488
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 109/270 (40%), Gaps = 36/270 (13%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED---- 60
G SP+ V+Y T+I + ++G+L A E+ E K I ++ T ++++D+L E
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK-MNTITLNTILDALCKERKLDE 469
Query: 61 ------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 102
TY +++ + E +++AL++ +M + + ++ LI
Sbjct: 470 AHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIG 529
Query: 103 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLS 162
GL +T A +A G L S T I+L C + E +
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDS-TFNSIILGYCKEGRVEKAFEFYNESIKHSFK 588
Query: 163 DDAATAHTTM------------LHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMY 210
D T + + L+ N E + D YN +I C+ + +AY++
Sbjct: 589 PDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLL 648
Query: 211 MEMVHYGHAPHMFSVLALISALDDDRMYNE 240
EM G P F+ + IS L +D +E
Sbjct: 649 SEMEEKGLEPDRFTYNSFISLLMEDGKLSE 678
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 108/249 (43%), Gaps = 40/249 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + GL PN V+Y+ ++ G+C++G L +A+++ +E + D TY+ L++ L
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI-VELMKQTNVLPDLCTYNILINGLC--- 321
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
G+M+ L+L M V Y+ LI+G + + EA++ + +
Sbjct: 322 ----------NAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 121 ASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKD-YSMRDLSDDAATAHTTMLHLKNK 178
+DG + + ++I L+ C + +++ VK+ M S D T HT
Sbjct: 372 ENDGVKA--NQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHT-------- 421
Query: 179 TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMY 238
LI + + ++ A M EM G + ++ ++ AL +R
Sbjct: 422 --------------LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKL 467
Query: 239 NEMSWVINN 247
+E ++N+
Sbjct: 468 DEAHNLLNS 476
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 47/237 (19%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G+SPN ++Y+T++ G+C L +A + D ++ + D
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEA----------------NNMLDLMVRNKCSPD 367
Query: 61 --TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 118
T++S++ Y + +++ ++S+ G +++ V YS+L+ G + + + A+
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 119 YIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 177
+ S G L P Y ILL+ C N + + +E+ +D
Sbjct: 428 EMVSHGVL--PDVMTYGILLDGLCDNGKLEKALEIFEDLQ-------------------- 465
Query: 178 KTDGENKTDGG--MYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
++K D G MY +I C+ V A+N++ + G P++ + +IS L
Sbjct: 466 ----KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 117/284 (41%), Gaps = 65/284 (22%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E G P+ V+Y+++++G C+ G+ A +L + E++ + D +
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV---KADVF----------- 229
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TYS++++ +G + A+ L +M G SS V Y+ L+ GL K + + L +
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM------- 172
S + P+ +++LL+ + + EL K+ R +S + T +T M
Sbjct: 290 VSREIV--PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 173 ----------LHLKNKTDGE--------------NKTDGGM-----------------YN 191
L ++NK + + D GM Y+
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407
Query: 192 LLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDD 235
+L+ C+S + A ++ EMV +G P + + L+ L D+
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 89/228 (39%), Gaps = 37/228 (16%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
GL NAV+YS ++ GFCQ G++ A EL E + D TY L+D L
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP-DVMTYGILLDGLC------- 449
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 124
G +++AL++ D+ + V Y+ +I G+ K + +A + G
Sbjct: 450 ------DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 125 FLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENK 184
P+ Y +++ L + + +L K + DG N
Sbjct: 504 V--KPNVMTYTVMISG--------------------LCKKGSLSEANILLRKMEEDG-NA 540
Query: 185 TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
+ YN LI H R ++ + + EM G + S+ +I L
Sbjct: 541 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 104/241 (43%), Gaps = 39/241 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M LSPN V+++ +I G+C+ G+L A L E + L+ TY +L+D
Sbjct: 189 MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR-RVRMSLNVVTYTALIDG----- 242
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
+ +G MQRA ++ M D + + Y+ +I+G ++ + A + L +
Sbjct: 243 --------FCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 121 ASDGF-LSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
+ G L + +Y V I+ C N + K E+V+D DL D TTM++
Sbjct: 295 LNQGMRLDITAYGV--IISGLCGNGKLKEATEIVEDMEKSDLVPDMVI-FTTMMN----- 346
Query: 180 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYN 239
+ +S + A NMY +++ G P + ++ +I + + +
Sbjct: 347 ----------------AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLH 390
Query: 240 E 240
E
Sbjct: 391 E 391
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 113/290 (38%), Gaps = 44/290 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G+ + +Y +ISG C G+L +A E+ +E +K+ D + D +
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEI-VEDMEKS---------DLVPDMV---- 339
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
++++MN Y G M+ A+ + H + G+ VA S +I+G+ K + EA ++Y
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA---IVYF 396
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
+ + +Y +L++ C +F + L S L D
Sbjct: 397 C----IEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKF------------- 439
Query: 180 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYN 239
MY I C+ N+ A+ + MV G + + LI L +
Sbjct: 440 ---------MYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMV 490
Query: 240 EMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEMAMDSLL 289
E V + L S DS +L + + A D+L +M L+
Sbjct: 491 EARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 118/284 (41%), Gaps = 39/284 (13%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + + P+ +Y+++I+GFC L KA ++ E + + +D + L D
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM-FE------FMVSKDCFPDL-------D 326
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TY++++ + ++ +L +MS G + V Y+ LI GL A++ +
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
SDG P Y ILL+ C+N + + +E V DY +
Sbjct: 387 VSDGV--PPDIMTYSILLDGLCNNGKLEKALE-VFDYMQK-------------------- 423
Query: 180 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYN 239
E K D +Y +I C++ V ++++ + G P++ + +IS L R+
Sbjct: 424 -SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 482
Query: 240 EMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEM 283
E ++ L DS L ++ + A +++ EM
Sbjct: 483 EAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 100/254 (39%), Gaps = 46/254 (18%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS--- 57
M + G PN V+Y V++G C+ G++ A+ L + E I D +++++DSL
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA-DVVIFNTIIDSLCKYR 199
Query: 58 -YED------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
+D TYSS+++ + G A QL DM + V ++
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 259
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSM 158
LI+ K+ + EA++ ++D +++ + + + L+ + M
Sbjct: 260 ALIDAFVKEGKFVEAEK-----------------LHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 159 RDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGH 218
D D A M+ D + YN LI C+S V ++ EM H G
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDT------YNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 219 APHMFSVLALISAL 232
+ LI L
Sbjct: 357 VGDTVTYTTLIQGL 370
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 115/287 (40%), Gaps = 60/287 (20%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G P+ V+Y+T+I GFC+ EL KA E+ + + ++ D
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD-------------VV 278
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR--TREAKR--- 115
TY+S+++ Y G M+ A L DM R G + V ++VL++G K T E R
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 116 -------DLLYIAS--DGFLSM-------------------PSYTVYDILLEN-CSNSEF 146
D++ S DG+ + P+ Y IL+ C+ +
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 147 KSLVELVKDYSMRDLSDD-------------AATAHTTMLHLKNKTDGENKTDGGMYNLL 193
EL+ + +D+ A + + ++ + K D + +L
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Query: 194 IFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 240
I HC + +A +++ +MV G +P +V +L+S L M E
Sbjct: 459 IIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKE 505
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 115/287 (40%), Gaps = 60/287 (20%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G P+ V+Y+T+I GFC+ EL KA E+ + + ++ D
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD-------------VV 278
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR--TREAKR--- 115
TY+S+++ Y G M+ A L DM R G + V ++VL++G K T E R
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 116 -------DLLYIAS--DGFLSM-------------------PSYTVYDILLEN-CSNSEF 146
D++ S DG+ + P+ Y IL+ C+ +
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 147 KSLVELVKDYSMRDLSDD-------------AATAHTTMLHLKNKTDGENKTDGGMYNLL 193
EL+ + +D+ A + + ++ + K D + +L
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Query: 194 IFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 240
I HC + +A +++ +MV G +P +V +L+S L M E
Sbjct: 459 IIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKE 505
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 30/246 (12%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G+SPN V+Y+ +ISG CQ G A +L E + T + DS++
Sbjct: 224 MTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQ----------TSGNYPDSVA--- 270
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
++++++ + G M A +L +DG++ YS LI+GL + R +A LY
Sbjct: 271 -HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFE--LYA 327
Query: 121 ASDGFLSMPSYTVYDILLENCSNS-EFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK- 178
P +Y IL++ S + + + ++L+ + +S D + + L +
Sbjct: 328 NMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRG 387
Query: 179 ------------TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 226
++ E+ D + +LI CR+ V +A ++ E+ G +P + +
Sbjct: 388 LLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFN 447
Query: 227 ALISAL 232
ALI L
Sbjct: 448 ALIDGL 453
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 27/151 (17%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYEL--KIETEDKAIWWL-----DEDTYDSLMDSLS 57
G SP+ +++ +I G C+ GEL +A L K+E A +L ++D++++S S
Sbjct: 438 GCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGS 497
Query: 58 ----YED--------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 99
Y D +Y+ ++N + G++ AL+L + + G V Y+
Sbjct: 498 ILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNT 557
Query: 100 LINGLHKKARTREAKRDLLYIASDGFLSMPS 130
LINGLH+ R EA + L+ A D F P+
Sbjct: 558 LINGLHRVGREEEAFK--LFYAKDDFRHSPA 586
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 42/253 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E GL+PN + Y+ ++ GFC+ GE+ KA EL LDE + L +
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL-----------LDEMSVKGLHPNAV--- 698
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TY ++++ Y G++ A +L +M G + Y+ L++G R + +R
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC---CRLNDVER----- 750
Query: 121 ASDGFLSMPSYTVYDILLENCSNS--EFKSLVELVKDYSMRDLSDDAATAHTTMLH--LK 176
+ T++ + C++S F +L+ V + +L T +L+ +
Sbjct: 751 ---------AITIFGTNKKGCASSTAPFNALINWVFKFGKTEL-------KTEVLNRLMD 794
Query: 177 NKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDR 236
D K + YN++I C+ N+ A ++ +M + P + + +L++ D
Sbjct: 795 GSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
Query: 237 MYNEMSWVINNTL 249
EM V + +
Sbjct: 855 RRAEMFPVFDEAI 867
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 89/230 (38%), Gaps = 39/230 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E GL PNA +Y ISG+ + E A DK + + E L +
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASA--------DKYVKEMRE------CGVLPNKV 558
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
+ ++N+Y +G + A M G L Y+VL+NGL K + +A+ +
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 121 ASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRD-LSDDAATAHTTMLHLKNKT 179
G P Y +L+ F L + K S+ D + ++ T +
Sbjct: 619 RGKGI--APDVFSYGVLING-----FSKLGNMQKASSIFDEMVEEGLTPNVI-------- 663
Query: 180 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 229
+YN+L+ CRS + KA + EM G P+ + +I
Sbjct: 664 ---------IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 105/263 (39%), Gaps = 39/263 (14%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL---SYEDT 61
GL P +Y +I G C+I L A L +E + + LD TY L+D L D
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVS-LDNHTYSLLIDGLLKGRNADA 330
Query: 62 YSSVMNDYLA-------------------EGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 102
++++ ++ EG M++A L M G + AY+ LI
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 103 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLS 162
G ++ R+ L+ + + P YT ++ CS+ + +VK+
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISP-YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 163 DDAATAHTTMLH--LKNKTDG-------ENKTDG-----GMYNLLIFEHCRSHNVHKAYN 208
+ +TT++ L+N G E K G YN LI ++ + +A +
Sbjct: 450 PNVVI-YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 209 MYMEMVHYGHAPHMFSVLALISA 231
+EMV G P+ F+ A IS
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISG 531
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 39/272 (14%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E+GL P++VSY+ +I G G+L A+ + E + + TY++L+ L E+
Sbjct: 318 MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFY-TYNTLIHGLFMEN 376
Query: 61 ----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
TY+ ++N Y G+ ++A L +M DG + Y+
Sbjct: 377 KIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYT 436
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYS 157
LI L +K +TREA D L+ G P + + L++ +C+ L+K+
Sbjct: 437 SLIYVLCRKNKTREA--DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMD 494
Query: 158 MRDLSDDAATAHTTMLHLKNKTDGEN-------------KTDGGMYNLLIFEHCRSHNVH 204
M ++ D T + M L + E K D YN LI + + +
Sbjct: 495 MMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTK 554
Query: 205 KAYNMYMEMVHYGHAPHMFSVLALISALDDDR 236
A+ + EM+ G P + + AL+ L ++
Sbjct: 555 HAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED-TYS 63
G+ P+ V +T++ G C IG + +A+ L E + M S++ +D TY+
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMD---------------MMSINPDDVTYN 506
Query: 64 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD 123
+M EG + A +L +M R G +++Y+ LI+G KK T+ A ++ D
Sbjct: 507 CLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA-----FMVRD 561
Query: 124 GFLSM---PSYTVYDILLENCSNSEFKSLVE 151
LS+ P+ Y+ LL+ S ++ L E
Sbjct: 562 EMLSLGFNPTLLTYNALLKGLSKNQEGELAE 592
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 38/247 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G+ P V+Y+T++ GF G + A + E + K + D TY+ ++ + E
Sbjct: 251 MEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG-FQPDMQTYNPILSWMCNEG 309
Query: 61 TYSSVMNDYLA-------------------EGNMQRALQLDHDMSRDGYLSSYVAYSVLI 101
S V+ + G+++ A +M + G + ++ Y+ LI
Sbjct: 310 RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLI 369
Query: 102 NGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRD 160
+GL + + A+ + I G + + S T Y+IL+ C + + K L D M D
Sbjct: 370 HGLFMENKIEAAEILIREIREKGIV-LDSVT-YNILINGYCQHGDAKKAFAL-HDEMMTD 426
Query: 161 LSDDAATAHTTMLHL---KNKTDGEN-----------KTDGGMYNLLIFEHCRSHNVHKA 206
+T+++++ KNKT + K D M N L+ HC N+ +A
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA 486
Query: 207 YNMYMEM 213
+++ EM
Sbjct: 487 FSLLKEM 493
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 39/267 (14%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + ++PN V++S +I F + G+L +A EL E + I D TY SL+D E+
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP-DTITYTSLIDGFCKEN 382
Query: 61 ----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
T++ ++N Y + L+L MS G ++ V Y+
Sbjct: 383 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYS 157
LI G + + AK + S P+ Y ILL+ C N E + +E+ +
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKV--PPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Query: 158 MRDLSDDAATAHTTMLHLKNKTDGEN-------------KTDGGMYNLLIFEHCRSHNVH 204
+ D + + + N + ++ K YN++I C+ +
Sbjct: 501 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS 560
Query: 205 KAYNMYMEMVHYGHAPHMFSVLALISA 231
+A ++ +M GHAP ++ LI A
Sbjct: 561 EAELLFRKMEEDGHAPDGWTYNILIRA 587
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 43/234 (18%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E G PNAV+Y V++ C+ G+ A EL + E++ I LD Y ++D L
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI-KLDAVKYSIIIDGLC--- 274
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK---RDL 117
G++ A L ++M G ++ + Y++LI G R + RD+
Sbjct: 275 ----------KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 118 LYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 177
+ + P+ + +L+++ VK+ +R +A H M+H
Sbjct: 325 IKRKIN-----PNVVTFSVLIDS-----------FVKEGKLR----EAEELHKEMIHRGI 364
Query: 178 KTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA 231
D Y LI C+ +++ KA M MV G P++ + LI+
Sbjct: 365 APDTIT------YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 97/235 (41%), Gaps = 41/235 (17%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
G+ + V+Y+T+I GFC++G+L A EL E + + + TY L+D L
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP-NIVTYKILLDGLC------- 484
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 124
G ++AL++ + + Y+++I+G+ ++ + A D
Sbjct: 485 ------DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD--------AWDL 530
Query: 125 FLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMR--DLSDDAATAHTTMLHLKNKTDGE 182
F S+P K + VK Y++ L + +L K + DG
Sbjct: 531 FCSLP----------------LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG- 573
Query: 183 NKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 237
+ DG YN+LI H + K+ + E+ G + ++ +I L D R+
Sbjct: 574 HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRL 628
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 48/258 (18%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS--- 57
M G PN V Y+TVI+G C+ +L A E+ E K I D TY++L+ LS
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRA-DAVTYNTLISGLSNSG 233
Query: 58 -YEDT------------------YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
+ D ++++++ ++ EGN+ A L +M R + + Y+
Sbjct: 234 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYN 293
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYS 157
LING +AK + S G P Y+ L+ C + + ++L + +
Sbjct: 294 SLINGFCIHGCLGDAKYMFDLMVSKG--CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 351
Query: 158 MRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYG 217
+ L DA T YN LI +C++ ++ A ++ MV G
Sbjct: 352 YQGLVGDAFT----------------------YNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 218 HAPHMFSVLALISALDDD 235
+P + + L+ L ++
Sbjct: 390 VSPDIVTYNILLDCLCNN 407
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 99/235 (42%), Gaps = 43/235 (18%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + PN +Y+++I+GFC G LG A + +D ++ + D
Sbjct: 280 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM----------------FDLMVSKGCFPD 323
Query: 61 --TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 118
TY++++ + ++ ++L +M+ G + Y+ LI+G + + A++
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 119 YIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 177
+ G P Y+ILL+ C+N + + + +V+D ++ D T
Sbjct: 384 RMVDCGV--SPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT---------- 431
Query: 178 KTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
YN++I CR+ + +A+ ++ + G P + + +IS L
Sbjct: 432 ------------YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS--- 57
M GL +A +Y+T+I G+CQ G+L A ++ D + D TY+ L+D L
Sbjct: 350 MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP-DIVTYNILLDCLCNNG 408
Query: 58 --------YED-----------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
ED TY+ ++ ++ A L ++R G +AY
Sbjct: 409 KIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYI 468
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYD 135
+I+GL +K REA + + DGF MPS +YD
Sbjct: 469 TMISGLCRKGLQREADKLCRRMKEDGF--MPSERIYD 503
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 48/239 (20%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL-------- 56
G+SPN ++Y+++++G C+ + +A E++ E ++K + LD Y +L+D
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK-LDIPAYGALIDGFCKRSNMES 672
Query: 57 --------------SYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 102
+ Y+S+++ + GNM AL L M +DG Y+ LI+
Sbjct: 673 ASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLID 732
Query: 103 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNS-EFKSLVELVKDYSMRDL 161
GL K A LY +P +Y +++ S +F +V++ ++ ++
Sbjct: 733 GLLKDGNLILASE--LYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Query: 162 SDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 220
+ + +YN +I H R N+ +A+ ++ EM+ G P
Sbjct: 791 TPNVL----------------------IYNAVIAGHYREGNLDEAFRLHDEMLDKGILP 827
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 107/262 (40%), Gaps = 52/262 (19%)
Query: 9 NAVSYSTVISGFCQIGELGKAYELKIE-TEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMN 67
N V Y T+I+G C++G+ KA EL E+K + S M +Y+S+++
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCV-------SCM-------SYNSIID 592
Query: 68 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF-L 126
+ EG M A+ +M +G + + Y+ L+NGL K R +A + + G L
Sbjct: 593 GFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKL 652
Query: 127 SMPSY-----------------TVYDILLE---NCSNSEFKSLVELVKDYSMRDLSDDAA 166
+P+Y ++ LLE N S + SL+ R+L + A
Sbjct: 653 DIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLIS-----GFRNLGNMVA 707
Query: 167 TAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 226
L+ K DG + D G Y LI + N+ A +Y EM G P
Sbjct: 708 ALD---LYKKMLKDGL-RCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYT 763
Query: 227 ALISALDDD-------RMYNEM 241
+++ L +M+ EM
Sbjct: 764 VIVNGLSKKGQFVKVVKMFEEM 785
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 39/233 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G+ PN V+YS++IS C G A L + ++ I + D +
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI---NPDVF----------- 327
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
T+S++++ ++ EG + A +L +M + S V YS LING R EAK+ ++
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
S P Y+ L++ C + +E+ ++ S R L + T
Sbjct: 388 VSKH--CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT------------ 433
Query: 180 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
YN+LI ++ + A ++ EMV G P++ + L+ L
Sbjct: 434 ----------YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 99/251 (39%), Gaps = 44/251 (17%)
Query: 8 PNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMN 67
P+ V+Y+T+I GFC+ + + E+ E + + + TY+ ++
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL--------------VGNTVTYNILIQ 439
Query: 68 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 127
G+ A ++ +M DG + + Y+ L++GL K + +A Y+
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM-- 497
Query: 128 MPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTD 186
P+ Y+I++E C + + +L + S++ + D
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA------------------- 538
Query: 187 GGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA--LDDDRMYNEMSWV 244
YN +I CR + +A ++ EM G P+ LI A D DR E S
Sbjct: 539 ---YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR---EASAE 592
Query: 245 INNTLRSCNLS 255
+ +RSC +
Sbjct: 593 LIKEMRSCGFA 603
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
G+ PN ++Y+T++ G C+ G+L KA + E S M+ Y TY+
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKA------------MVVFEYLQRSKMEPTIY--TYNI 506
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 124
++ G ++ L ++S G VAY+ +I+G +K EA + DG
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Query: 125 FLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMRDLSDDAATAH--TTMLH 174
++P+ Y+ L+ + + ++ EL+K+ + DA+T T MLH
Sbjct: 567 --TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 617
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 102/258 (39%), Gaps = 48/258 (18%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E + +AV YS +I G C+ G L A+ L E E K + D Y +L+ Y
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIIIYTTLIRGFCYAG 296
Query: 61 ----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
+S++++ ++ EG ++ A +L +M + G V Y+
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYS 157
LI+G K+ + +A L + S G P+ ++IL+ C + +EL + S
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKG--CGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 158 MRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYG 217
+R + D T YN LI C + A ++ EMV
Sbjct: 415 LRGVVADTVT----------------------YNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 218 HAPHMFSVLALISALDDD 235
P + S L+ L D+
Sbjct: 453 VRPDIVSYKILLDGLCDN 470
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 30/245 (12%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + G+SP+ V+Y+++I GFC+ +L DKA LD ++
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQL-----------DKANHMLDLMVSKGCGPNIR--- 388
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
T++ ++N Y + L+L MS G ++ V Y+ LI G + + AK +
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
S P Y ILL+ C N E + +E+ + + D + + + N +
Sbjct: 449 VSRRV--RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 180 DGEN-------------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 226
++ K D YN++I C+ ++ +A ++ +M GH+P+ +
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 227 ALISA 231
LI A
Sbjct: 567 ILIRA 571
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 116/269 (43%), Gaps = 57/269 (21%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M M ++PN +Y+++I+GFC G + +A + +++L E T D ++Y
Sbjct: 273 MIRMSIAPNIFTYTSLINGFCMEGCVDEA---------RQMFYLME-TKGCFPDVVAY-- 320
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
+S++N + + A+++ ++MS+ G + + Y+ LI G + + A+ ++
Sbjct: 321 --TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAAT--AHTTMLHLKN 177
S G P+ Y++LL C N + K + + +D R++ A + +LH
Sbjct: 379 VSRGV--PPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH--- 433
Query: 178 KTDGENKTDGGMYN------LLIFEH--------------------CRSHNVHKAYNMYM 211
G YN L++FE C++ V A N++
Sbjct: 434 ---------GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 212 EMVHYGHAPHMFSVLALISALDDDRMYNE 240
+ G P++ + +IS L + + +E
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHE 513
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 51/283 (18%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSL---------MDS 55
GL PN V Y+T+I G+C+ G+L A +KIE +K D Y+ L M++
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGA-RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMEN 442
Query: 56 LSYE-------------DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 102
E +TY+ ++ Y + + + +M +G + + V+Y LIN
Sbjct: 443 AEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 103 GLHKKARTREA---KRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSM 158
L K ++ EA KRD+ D +S P +Y++L++ CS + + K+
Sbjct: 503 CLCKGSKLLEAQIVKRDM----EDRGVS-PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557
Query: 159 RDLSDDAATAHTTM--LHLKNK-TDGEN----------KTDGGMYNLLIFEHCRSHNVHK 205
+ + + T +T + L + K ++ E+ K D YN LI + + NV +
Sbjct: 558 KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQR 617
Query: 206 AYNMYMEMVHYGHAPHMFSVLALISALDD------DRMYNEMS 242
+Y EM G P + + LIS +R++ EMS
Sbjct: 618 CIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMS 660
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 119/286 (41%), Gaps = 51/286 (17%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSY-- 58
M + G+SP Y+ +I G C G++ A+ E K I L+ TY++L+D LS
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE-LNLVTYNTLIDGLSMTG 578
Query: 59 -----ED---------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
ED TY+S+++ Y GN+QR + L +M R G + Y
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSM-PSYTVYDILLENC--SNSEFKSLVELVKD 155
+LI+ K+ E L G +S+ P VY+ +L +C + + + L K
Sbjct: 639 LLISLCTKEGI--ELTERLF-----GEMSLKPDLLVYNGVL-HCYAVHGDMEKAFNLQKQ 690
Query: 156 YSMRDLSDDAATAHTTML-HLK--------------NKTDGENKTDGGMYNLLIFEHCRS 200
+ + D T ++ +L LK N + E + D YN+++ HC
Sbjct: 691 MIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEAD--TYNIIVKGHCEV 748
Query: 201 HNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVIN 246
+ AY Y EM G + L+S L ++ E VI+
Sbjct: 749 KDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVIS 794
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 39/241 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G PN SY+ ++ GFC++G++ +AY + L+E + D L +
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV-----------LNEMSADGLKPNTV--- 460
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
++ +++ + E + A+++ +M R G ++ LI+GL + + A L +
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
S+G ++ + Y+ L+ E K +LV + + D T
Sbjct: 521 ISEGVVA--NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT------------ 566
Query: 180 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYN 239
YN LI CR+ V KA +++ +M+ GHAP S LI+ L M
Sbjct: 567 ----------YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 240 E 240
E
Sbjct: 617 E 617
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 113/305 (37%), Gaps = 76/305 (24%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLD------------EDTYDSL 52
G +P+ ++Y +++G C+IG + A +L I + +D L
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 53 MDSLSYED------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 106
D ++ TY+S++ Y EG + AL++ HDM G + +Y++L++G K
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 107 KARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAA 166
+ EA L +++DG
Sbjct: 437 LGKIDEAYNVLNEMSADG------------------------------------------ 454
Query: 167 TAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 226
LK T G +N LI C+ H + +A ++ EM G P +++
Sbjct: 455 --------LKPNTVG--------FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 498
Query: 227 ALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEMAMD 286
+LIS L + W++ + + ++++ L + + EI ++ EM
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 287 SLLLD 291
LD
Sbjct: 559 GSPLD 563
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
G+ N V+Y+T+I+ F + GE+ +A +L E + LDE TY+SL+ L
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG-SPLDEITYNSLIKGLC------- 575
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 124
G + +A L M RDG+ S ++ ++LINGL + EA + G
Sbjct: 576 ------RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 125 FLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM 172
S P ++ L+ C + + + + + D T +T M
Sbjct: 630 --STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 118/269 (43%), Gaps = 41/269 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G+ + +Y+ +I C+ + K Y L + + I +E TY++L++ S E
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP-NEVTYNTLINGFSNEG 352
Query: 61 ----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
T++++++ +++EGN + AL++ + M G S V+Y
Sbjct: 353 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 412
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSM 158
VL++GL K A A+ + + +G + + T ++ C N V L+ + S
Sbjct: 413 VLLDGLCKNAEFDLARGFYMRMKRNG-VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 471
Query: 159 RDLSDDAATAHTTMLHLKNKTDGENKT---------------DGGMYNLLIFEHCRSHNV 203
+ D T ++ +++ K G KT +G +Y+ LI+ CR +
Sbjct: 472 DGIDPDIVT-YSALINGFCKV-GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 529
Query: 204 HKAYNMYMEMVHYGHAPHMFSVLALISAL 232
+A +Y M+ GH F+ L+++L
Sbjct: 530 KEAIRIYEAMILEGHTRDHFTFNVLVTSL 558
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 93/233 (39%), Gaps = 43/233 (18%)
Query: 3 EMGLSPNAVSYSTVISGFCQIGELGKA---YELKIETEDKAIWWLDEDTYDSLMDSLSYE 59
+GLSPN + YST+I C++G L +A YE I L+ T D
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI---------LEGHTRDHF------- 549
Query: 60 DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY 119
T++ ++ G + A + M+ DG L + V++ LING +A
Sbjct: 550 -TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608
Query: 120 IASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
+ G P++ Y LL+ L K +R+ + H
Sbjct: 609 MTKVG--HHPTFFTYGSLLKG-----------LCKGGHLREAEKFLKSLHAV-------- 647
Query: 180 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
D MYN L+ C+S N+ KA +++ EMV P ++ +LIS L
Sbjct: 648 --PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 40/252 (15%)
Query: 3 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 62
M +SP+ V+Y+T++ C G+L +A +E D+ L D Y ++ TY
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQA----MEVLDR---MLQRDCYPDVI-------TY 242
Query: 63 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 122
+ ++ + + A++L +M G V Y+VL+NG+ K+ R EA + L + S
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 123 DGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDG 181
G P+ ++I+L + CS + +L+ D + S T
Sbjct: 303 SG--CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT-------------- 346
Query: 182 ENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL-DDDRMYNE 240
+N+LI CR + +A ++ +M +G P+ S L+ + +M
Sbjct: 347 --------FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 241 MSWVINNTLRSC 252
+ ++ R C
Sbjct: 399 IEYLERMVSRGC 410
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 108/249 (43%), Gaps = 43/249 (17%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
MP+ G PN++SY+ ++ GFC+ E K+ D+AI +L+ ++ Y D
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCK--------EKKM---DRAIEYLER-----MVSRGCYPD 413
Query: 61 --TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 118
TY++++ +G ++ A+++ + +S G + Y+ +I+GL K +T +A + L
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 119 YIASDGFLSMPSYTVYDILLENCSN-SEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 177
+ + P Y L+ S + ++ ++ + +A T ++ ML L
Sbjct: 474 EMRAKDL--KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL-- 529
Query: 178 KTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 237
C+S +A + + M++ G P+ S LI L + M
Sbjct: 530 --------------------CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGM 569
Query: 238 YNEMSWVIN 246
E ++N
Sbjct: 570 AKEALELLN 578
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 35/271 (12%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + + PN V+Y+++I+GFC L +A ++ K D L D +
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK----------DCLPDVV---- 381
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TY++++N + + ++L DMSR G + + V Y+ LI+G + + A+ +
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTT---MLHLK 176
SDG P+ Y+ LL+ C N + + + + + + D T + M
Sbjct: 442 VSDGV--HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Query: 177 NKTDGEN----------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 226
DG + K D YN +I C+ +AY ++++M G P +
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYN 559
Query: 227 ALISA--LDDDRMYNEMSWVINNTLRSCNLS 255
LI A D D+ S + +RSC +
Sbjct: 560 TLIRAHLRDGDK---AASAELIKEMRSCRFA 587
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 35/228 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS--- 57
M + + + V YSTVI C+ + A L E ++K I D TY SL+ L
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP-DVFTYSSLISCLCNYG 289
Query: 58 -YED------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
+ D T++S+++ + EG + A +L +M + + V Y+
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYS 157
LING R EA++ + S L P Y+ L+ C + +EL +D S
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCL--PDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 158 MRDLSDDAATAHTTMLH-LKNKTDGENKTDGGMYNLLIFEHCRSHNVH 204
R L + T +TT++H +D +N ++F+ S VH
Sbjct: 408 RRGLVGNTVT-YTTLIHGFFQASDCDNAQ-------MVFKQMVSDGVH 447
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 123/308 (39%), Gaps = 52/308 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDED--TYDSLMDSLSY 58
M E ++PN V++S +I F + G+L +A +L E ++I D D TY SL++
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI---DPDIFTYSSLINGFCM 373
Query: 59 ED----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 96
D TY++++ + + ++L +MS+ G + + V
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 97 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKD 155
Y+ LI+G + A+ + SDG L P Y ILL+ C+N + ++ + + +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVL--PDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 156 YSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVH 215
+ D T YN++I C++ V ++++ +
Sbjct: 492 LQRSKMEPDIYT----------------------YNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 216 YGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYA 275
G P++ + ++S + E + L DS L ++ + A
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAA 589
Query: 276 LLDVLAEM 283
+++ EM
Sbjct: 590 SAELIREM 597
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G+ PN V+Y+++I C G A L + ++ I + +
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI---NPNVV----------- 327
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL-LY 119
T+S++++ ++ EG + A +L +M + YS LING R EAK L
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 120 IASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH 174
I+ D F P+ Y+ L++ C +EL ++ S R L + T +TT++H
Sbjct: 388 ISKDCF---PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT-YTTLIH 439
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 37/227 (16%)
Query: 6 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 65
L PN V+Y+T++S CQ+G++ + +L ED+ +D + YS+
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGF------EFDCVF--------YSNW 248
Query: 66 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 125
++ Y G + AL D +M G V+YS+LI+GL K+ EA L + +G
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 126 LSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT 185
P+ Y ++ + L ++ K ++A +L + +
Sbjct: 309 --EPNLITYTAII--------RGLCKMGK-------LEEAFVLFNRILSVG------IEV 345
Query: 186 DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
D +Y LI CR N+++A++M +M G P + + +I+ L
Sbjct: 346 DEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGL 392
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + G+ PN ++Y+ +I G C++G+L +A+ L I +DE Y +L+D +
Sbjct: 303 MIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIE-VDEFLYVTLIDGIC--- 358
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 113
+GN+ RA + DM + G S + Y+ +INGL R EA
Sbjct: 359 ----------RKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA 401
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 7 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 66
S + + Y+ +I+G C+ G L KA L + + + T +++ TY+S++
Sbjct: 652 SMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGV------TLNTI--------TYNSLI 697
Query: 67 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 126
N +G + AL+L + G + S V Y +LI+ L K+ +A++ L + S G +
Sbjct: 698 NGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLV 757
Query: 127 SMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGE 182
P+ +Y+ +++ C + + + +V M ++ DA T + + K D E
Sbjct: 758 --PNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDME 812
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 48/258 (18%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E+G P+ V+Y+ +I C+ + A++ E E K I + TY +L++ L
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRP-NVVTYTALVNGLCNSS 239
Query: 61 ----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
TYS++++ ++ G + A +L +M R V YS
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYS 157
LINGL R EA + + S G L+ Y+ L+ C + ++L ++ S
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLA--DVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 158 MRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYG 217
R L + T YN LI ++ +V KA + +M +G
Sbjct: 358 QRGLVSNTVT----------------------YNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 218 HAPHMFSVLALISALDDD 235
+P +++ L+ L D+
Sbjct: 396 ISPDIWTYNILLGGLCDN 413
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 21/178 (11%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + G +PN +YS +++GFC++G++ +A + T+D + + D
Sbjct: 294 MKKNGCNPNVYNYSALMNGFCKVGKIQEA----------------KQTFDEVKKTGLKLD 337
Query: 61 T--YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 118
T Y+++MN + G A++L +M + + Y+V++ GL + R+ EA + L
Sbjct: 338 TVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLD 397
Query: 119 YIASDGF-LSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHL 175
S+G L+ SY + IL C N E + V+ + S R + AT + ++ L
Sbjct: 398 QWGSEGVHLNKGSYRI--ILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRL 453
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 102/254 (40%), Gaps = 37/254 (14%)
Query: 4 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS------ 57
+GL PN ++ ++ C+ G++ A+ + E + I + + TY +LMD L
Sbjct: 190 LGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK 249
Query: 58 -----YED------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 100
+ED T++ ++N + G ++RA ++ M ++G + YS L
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 101 INGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRD 160
+NG K + +EAK+ + G L + + ++ C N E ++L+ +
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTG-LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR 368
Query: 161 LSDDAATAHTTMLHLKNKTDGENK-------------TDGGMYNLLIFEHCRSHNVHKAY 207
D T + + L ++ E + G Y +++ C + + KA
Sbjct: 369 CRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAV 428
Query: 208 NMYMEMVHYGHAPH 221
M G PH
Sbjct: 429 KFLSVMSERGIWPH 442
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 108/274 (39%), Gaps = 39/274 (14%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
MP G N V+Y+ +I G C + +A +L ++ +D + TY L+ SL +
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVR-TYTVLIKSLCGSE 337
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
S AL L +M G + Y+VLI+ L + + +A+ L +
Sbjct: 338 RKS-------------EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAAT------------ 167
G MP+ Y+ L+ C + V++V+ R LS + T
Sbjct: 385 LEKGL--MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
Query: 168 AHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLA 227
H M L + + D YN LI CRS N AY + M G P ++ +
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 228 LISALDDDRMYNEMSWVINNTLRSCNLSDSEQLK 261
+I +L + E +C+L DS + K
Sbjct: 503 MIDSLCKSKRVEE----------ACDLFDSLEQK 526
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 99/232 (42%), Gaps = 39/232 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E + PN +Y+ +++G+C++G + +A + + + LD D +
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG---LDPDFF----------- 254
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TY+S++ Y ++ A ++ ++M G + VAY+ LI+GL R EA + +
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
Query: 121 ASDGFLSMPSYTVYDILLENCSNSEFKS-LVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
D P+ Y +L+++ SE KS + LVK+ + + T
Sbjct: 315 KDDE--CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT------------ 360
Query: 180 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA 231
Y +LI C KA + +M+ G P++ + ALI+
Sbjct: 361 ----------YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
G SPN VSY+T+I G+C++G GK Y KA L E + + +L+ T++
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMY--------KADAVLKEMVENDVSPNLT---TFNI 301
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA--KRDLLYIAS 122
+++ + + N+ ++++ +M + ++Y+ LINGL + EA RD + A
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 123 DGFLSMPSYTVYDILLEN-CSNSEFKSLVEL---------VKDYSMRDLSDDAATAHTTM 172
P+ Y+ L+ C N K +++ V M ++ DA +
Sbjct: 362 ----VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKI 417
Query: 173 ---LHLKNKTDGEN-KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYG 217
LK + + E D G YN LI CR+ N+ A ++ ++ G
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 94/236 (39%), Gaps = 49/236 (20%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + + PN +SY+++I+G C G++ +A ++ + + + TY++L++ D
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP-NLITYNALINGFCKND 380
Query: 61 T----------------------YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
Y+ +++ Y G + L +M R+G + Y+
Sbjct: 381 MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYN 440
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYS 157
LI GL + AK+ + S G +P + IL+E C E + L+K+ S
Sbjct: 441 CLIAGLCRNGNIEAAKKLFDQLTSKG---LPDLVTFHILMEGYCRKGESRKAAMLLKEMS 497
Query: 158 MRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 213
L H T YN+++ +C+ N+ A NM +M
Sbjct: 498 KMGLK----PRHLT------------------YNIVMKGYCKEGNLKAATNMRTQM 531
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 115/270 (42%), Gaps = 41/270 (15%)
Query: 3 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED-- 60
+ G +PN V++ T+I+GFC+ GE+ +A++L E + I D Y +L+D
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEP-DLIAYSTLIDGYFKAGML 337
Query: 61 --------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 100
+SS ++ Y+ G++ A + M G + V Y++L
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 101 INGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE---NCSN--SEFKSLVELVK- 154
I GL + R EA I G PS Y L++ C N S F +++K
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGM--EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 155 ----DYSMRDLSDDAATAHTTMLH---LKNKTDGEN-KTDGGMYNLLIFEHCRSHNVHKA 206
D + + D + MLH K G++ + + ++N LI CR + +A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 207 YNMYMEMVHYGHAPHM--FSVLALISALDD 234
++ M YG P + F+ + +S ++D
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMED 545
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 30/239 (12%)
Query: 8 PNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMN 67
P+ V++S +I F + G+L +A EL E + I D TY+SL+D E+
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP-DTITYNSLIDGFCKENC------ 365
Query: 68 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 127
L E N Q+ M G V YS+LIN K R + R I+S G +
Sbjct: 366 --LHEAN-----QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI- 417
Query: 128 MPSYTVYDIL-LENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTM------------LH 174
P+ Y+ L L C + + + EL ++ R + T + L
Sbjct: 418 -PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 175 LKNKTDGENKTDG-GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
+ K T G G+YN++I C + V A++++ + G P + + +I L
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 91/233 (39%), Gaps = 37/233 (15%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
GL PN ++Y+T++ GFCQ G+L A EL E + + TY L+D L
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP-SVVTYGILLDGLC------- 466
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 124
G + +AL++ M + Y+++I+G+ ++ +A ++ G
Sbjct: 467 ------DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 125 FLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENK 184
P Y++++ L + + ML K K DG
Sbjct: 521 V--KPDVVTYNVMIGG--------------------LCKKGSLSEADMLFRKMKEDGCTP 558
Query: 185 TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 237
D YN+LI H + + + EM G + ++ +I L D R+
Sbjct: 559 DD-FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRL 610
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 122/295 (41%), Gaps = 54/295 (18%)
Query: 3 EMGLSPNAVSYSTVISGFCQIGELGKAYEL---KIETEDKAIWWLDEDTYDSLMDSLSY- 58
++G P+ +++ST+++GFC G + +A L +E + + D T +L++ L
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP----DLVTVSTLINGLCLK 188
Query: 59 ---------------------EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAY 97
E TY V+N GN AL L M +S V Y
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 98 SVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDY 156
S++I+ L K +A + G + Y L+ C++ ++ +++++
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKA--DVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 157 SMRDLSDDAATAHTTM-LHLKNKTDGENK------------TDGGMYNLLIFEHCRSHNV 203
R++ D T + + +K E K D YN LI C+ + +
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 204 HKAYNMYMEMVHYGHAPHMFSVLALISA------LDDD-RMYNEMS--WVINNTL 249
H+A M+ MV G P + + LI++ +DD R++ E+S +I NT+
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 124/308 (40%), Gaps = 52/308 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDED--TYDSLMDSLSY 58
M E ++PN V+++ +I F + G+ +A +L + ++I D D TY+SL++
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI---DPDIFTYNSLVNGFCM 377
Query: 59 ED----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 96
D TY++++ + ++ +L +MS G + V
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 97 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKD 155
Y+ LI GL A++ + SDG P Y ILL+ C+N + + +E V D
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGV--PPDIMTYSILLDGLCNNGKLEKALE-VFD 494
Query: 156 YSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVH 215
Y + E K D +Y +I C++ V ++++ +
Sbjct: 495 YMQK---------------------SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 533
Query: 216 YGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYA 275
G P++ + +IS L R+ E ++ L +S L ++ + A
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAA 593
Query: 276 LLDVLAEM 283
+++ EM
Sbjct: 594 SAELIREM 601
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 98/254 (38%), Gaps = 46/254 (18%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLS--- 57
M + G PN V+Y V++G C+ G+ A L + E I D +++++DSL
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA-DVVIFNTIIDSLCKYR 274
Query: 58 -YED------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
+D TYSS+++ + G A QL DM + V ++
Sbjct: 275 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 334
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSM 158
LI+ K+ + EA++ +YD +++ + + + LV + M
Sbjct: 335 ALIDAFVKEGKFVEAEK-----------------LYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 159 RDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGH 218
D D A M+ + D YN LI C+S V ++ EM H G
Sbjct: 378 HDRLDKAKQMFEFMVS------KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 219 APHMFSVLALISAL 232
+ LI L
Sbjct: 432 VGDTVTYTTLIQGL 445
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 98/250 (39%), Gaps = 72/250 (28%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + GL PN V+++T+I GFC+ +L +A K+ E KA+
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEAS--KVFGEMKAVNVAPNTV------------ 344
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TY++++N Y +G+ + A + DM +G + Y+ LI GL K+A+TR+A
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA------- 397
Query: 121 ASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD 180
+ VK+ +L +++T
Sbjct: 398 -----------------------------AQFVKELDKENLVPNSST------------- 415
Query: 181 GENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 240
++ LI C N + + +Y M+ G P+ + L+SA + ++
Sbjct: 416 ---------FSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 241 MSWVINNTLR 250
S V+ +R
Sbjct: 467 ASQVLREMVR 476
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 98/250 (39%), Gaps = 72/250 (28%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + GL PN V+++T+I GFC+ +L +A K+ E KA+
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEAS--KVFGEMKAVNVAPNTV------------ 344
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TY++++N Y +G+ + A + DM +G + Y+ LI GL K+A+TR+A
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA------- 397
Query: 121 ASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD 180
+ VK+ +L +++T
Sbjct: 398 -----------------------------AQFVKELDKENLVPNSST------------- 415
Query: 181 GENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 240
++ LI C N + + +Y M+ G P+ + L+SA + ++
Sbjct: 416 ---------FSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 241 MSWVINNTLR 250
S V+ +R
Sbjct: 467 ASQVLREMVR 476
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 43/270 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYEL--KIETEDKAIWWLDEDTYDSLMDSLSY 58
M + G P+ +Y++VISG C++GE+ +A E+ ++ T D + + TY++L+ +L
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV---TYNTLISTLCK 377
Query: 59 ED----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 96
E+ T++S++ N + A++L +M G
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 97 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKD 155
Y++LI+ L K + EA L + G S Y+ L++ C ++ + E+ +
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCAR--SVITYNTLIDGFCKANKTREAEEIFDE 495
Query: 156 YSMRDLSDDAATAHTTMLHLKNKTDGEN-------------KTDGGMYNLLIFEHCRSHN 202
+ +S ++ T +T + L E+ K D YN L+ CR +
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGD 555
Query: 203 VHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
+ KA ++ M G P + + LIS L
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 40/234 (17%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E G S + VS + ++ GFC+ G + A E ++ ++ D+ T+++L++ L
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC--- 306
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL-LY 119
G+++ A+++ M ++GY Y+ +I+GL K +EA L
Sbjct: 307 ----------KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 120 IASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 178
I D P+ Y+ L+ C ++ + EL + + + + D T
Sbjct: 357 ITRD---CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT----------- 402
Query: 179 TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
+N LI C + N A ++ EM G P F+ LI +L
Sbjct: 403 -----------FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 99/253 (39%), Gaps = 41/253 (16%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED---- 60
G+ P+ +++++I G C A EL E K DE TY+ L+DSL +
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP-DEFTYNMLIDSLCSKGKLDE 453
Query: 61 ------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 102
TY+++++ + + A ++ +M G + V Y+ LI+
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLID 513
Query: 103 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDL 161
GL K R +A + + + +G P Y+ LL + C + K ++V+ +
Sbjct: 514 GLCKSRRVEDAAQLMDQMIMEG--QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 162 SDDAATAHTTMLHLKN--------------KTDGENKTDGGMYNLLIFEHCRSHNVHKAY 207
D T T + L + G N T YN +I R +A
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA-YNPVIQGLFRKRKTTEAI 630
Query: 208 NMYMEMVHYGHAP 220
N++ EM+ AP
Sbjct: 631 NLFREMLEQNEAP 643
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
G+SPN V+Y+ +I G CQ G + +A+ + + L S++ TYSS
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQI-------LKRGMEPSIV-------TYSS 431
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 124
+++ + GN++ L DM + GY V Y VL++GL K+ A R + G
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR--FSVKMLG 489
Query: 125 FLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM 172
+ V++ L++ C + F +++ + + + D AT T M
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 114/269 (42%), Gaps = 41/269 (15%)
Query: 3 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED-- 60
+ G +PN V++ T+I+GFC+ GE+ +A++L E + I D Y +L+D
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEP-DLIAYSTLIDGYFKAGML 337
Query: 61 --------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 100
+SS ++ Y+ G++ A + M G + V Y++L
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 101 INGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE---NCSN--SEFKSLVELVK- 154
I GL + R EA I G PS Y L++ C N S F +++K
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGM--EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 155 ----DYSMRDLSDDAATAHTTMLH---LKNKTDGEN-KTDGGMYNLLIFEHCRSHNVHKA 206
D + + D + MLH K G++ + + ++N LI CR + +A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 207 YNMYMEMVHYGHAPHM--FSVLALISALD 233
++ M YG P + F+ + +S ++
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIME 544
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E G++PN +Y+T++ GF + G++ A+E +E + + D +D +
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR----------DCEIDVV---- 266
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TY++V++ + G ++RA + +M R+G L S Y+ +I L KK A +
Sbjct: 267 TYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEM 326
Query: 121 ASDGFLSMPSYTVYDILLE 139
G+ P+ T Y++L+
Sbjct: 327 VRRGY--EPNVTTYNVLIR 343
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 52/261 (19%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIW---WLDEDTYDSLMDSLSYEDT 61
GL P++ +Y+T+I+G+C+ G +L A++ D+ TY SL+D L +E
Sbjct: 316 GLEPDSYTYNTLIAGYCK----GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 62 ----------------------YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 99
Y++++ +G + A QL ++MS G + +++
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 100 LINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMR 159
L+NGL K +A + + S G+ P ++IL+ YS +
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYF--PDIFTFNILIHG---------------YSTQ 474
Query: 160 DLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHA 219
++A ML N D + T YN L+ C++ Y MV G A
Sbjct: 475 LKMENALEILDVMLD--NGVDPDVYT----YNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 220 PHMFSVLALISALDDDRMYNE 240
P++F+ L+ +L R +E
Sbjct: 529 PNLFTFNILLESLCRYRKLDE 549
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 48/251 (19%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL-------- 56
G PN V+Y+T+I G C G+L KA L +E + ++ TY +L++ L
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSL-LERMVSSKCIPNDVTYGTLINGLVKQRRATD 345
Query: 57 ------SYED--------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 102
S E+ YS +++ EG + A+ L M+ G + V YSVL++
Sbjct: 346 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVD 405
Query: 103 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLS 162
GL ++ + EAK L + + G L P+ Y L+K + L
Sbjct: 406 GLCREGKPNEAKEILNRMIASGCL--PNAYTYS---------------SLMKGFFKTGLC 448
Query: 163 DDAATAHTTMLHLKNKTD-GENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPH 221
++A M +KT NK Y++LI C V +A ++ +M+ G P
Sbjct: 449 EEAVQVWKEM----DKTGCSRNKF---CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501
Query: 222 MFSVLALISAL 232
+ ++I L
Sbjct: 502 TVAYSSIIKGL 512
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 38/236 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDS--LSY 58
M E G PN V YS ++ G C+ G+ +A E+ + ++ S L
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI----------------LNRMIASGCLPN 431
Query: 59 EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 118
TYSS+M + G + A+Q+ +M + G + YSVLI+GL R +EA
Sbjct: 432 AYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWS 491
Query: 119 YIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 178
+ + G P Y +++ L SM D A + ML +
Sbjct: 492 KMLTIGI--KPDTVAYSSIIKG-----------LCGIGSM----DAALKLYHEMLC---Q 531
Query: 179 TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDD 234
+ +++ D YN+L+ C ++ +A ++ M+ G P + + ++ L +
Sbjct: 532 EEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 38/272 (13%)
Query: 4 MGLSPNAVSYSTVISGFCQIGELGKAYEL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTY 62
M +SPN +S++ VI C++ + +A E+ + E K + D TY +LMD L E+
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLP--DGYTYCTLMDGLCKEE-- 236
Query: 63 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR-TREAKRDLLYIA 121
+ A+ L +M +G S V Y+VLI+GL KK TR K +
Sbjct: 237 -----------RIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTK-----LV 280
Query: 122 SDGFL--SMPSYTVYDILLEN-CSNSEFKSLVELVKD-YSMRDLSDDA--ATAHTTMLHL 175
+ FL +P+ Y+ L+ C + V L++ S + + +D T ++
Sbjct: 281 DNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQ 340
Query: 176 KNKTDG-------ENK---TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 225
+ TD E + + +Y++LI + +A +++ +M G P++
Sbjct: 341 RRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVY 400
Query: 226 LALISALDDDRMYNEMSWVINNTLRSCNLSDS 257
L+ L + NE ++N + S L ++
Sbjct: 401 SVLVDGLCREGKPNEAKEILNRMIASGCLPNA 432
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 107/257 (41%), Gaps = 52/257 (20%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDED--TYDSLMDSLSY 58
M E ++PN V++S +I F + G+L +A +L E ++I D D TY SL++
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI---DPDIFTYSSLINGFCM 375
Query: 59 ED----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 96
D TYS+++ + ++ ++L +MS+ G + + V
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 97 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKD 155
Y+ LI+G + A+ + S G P+ Y+ILL+ C N +
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGV--HPNILTYNILLDGLCKNGKL--------- 484
Query: 156 YSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVH 215
A A +L+ T + D YN++I C++ V + ++ +
Sbjct: 485 ----------AKAMVVFEYLQRST---MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 216 YGHAPHMFSVLALISAL 232
G +P++ + +IS
Sbjct: 532 KGVSPNVIAYNTMISGF 548
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 19/177 (10%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M +G+ PN ++Y+ ++ G C+ G+L KA + E ++ ++ D Y
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVV-FEYLQRST--MEPDIY----------- 504
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TY+ ++ G ++ +L ++S G + +AY+ +I+G +K EA L +
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 121 ASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMRDLSDDAATAH--TTMLH 174
DG +P+ Y+ L+ + + ++ EL+K+ + DA+T T MLH
Sbjct: 565 KEDG--PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 619
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 99/243 (40%), Gaps = 40/243 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M ++G+ P Y +I +C++ + KA E ++ L+ D
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREF----------------FEILVTKKIVPD 634
Query: 61 --TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 118
TY+ ++N Y ++A L DM R V YSVL+N + RE
Sbjct: 635 LFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREM----- 689
Query: 119 YIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 177
+ F +P Y I++ C ++ K + L KD R++ D T +T + LKN
Sbjct: 690 ----EAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVT-YTVL--LKN 742
Query: 178 KTDG---------ENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLAL 228
K + + K D Y +LI C+ ++ +A ++ +M+ G P AL
Sbjct: 743 KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTAL 802
Query: 229 ISA 231
I+
Sbjct: 803 IAC 805
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 104/263 (39%), Gaps = 37/263 (14%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYEL-----KIETEDKAIWWLD-------------- 45
G PN V+Y+ +++G C+IG G A L K E I +
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 46 EDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 103
++ Y+ ++ Y D TY S++N G + A Q+ + M R+G + V Y+ LI+G
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 104 LHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLS 162
K R + + ++ G ++ + Y +L++ C E+ S R
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVA--NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP 395
Query: 163 DDAATAHTTM--LHLKNKTDG-----------ENKTDGGMYNLLIFEHCRSHNVHKAYNM 209
D T + + L K + E + Y ++I C+ V A+++
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455
Query: 210 YMEMVHYGHAPHMFSVLALISAL 232
+ + G P++ + +IS
Sbjct: 456 FCSLFSKGMKPNVITYTTMISGF 478
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 110/274 (40%), Gaps = 59/274 (21%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDED--TYDSLMDSLSY 58
M E ++PN V++S +I F + G+L +A +L E ++I D D TY SL++
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI---DPDIFTYSSLINGFCM 372
Query: 59 ED----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 96
D TY++++ + ++ ++L +MS+ G + + V
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 97 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKD 155
Y+ LI GL + A++ + SDG P Y ILL+ C + + + + +
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGV--PPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 156 YSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVH 215
+ D T YN++I C++ V ++++ +
Sbjct: 491 LQKSKMEPDIYT----------------------YNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 216 YGHAPHMFSVLALISAL-------DDDRMYNEMS 242
G P++ +IS + D ++ EM
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 41/234 (17%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G+ PN V+Y+++I C G A L + ++ I + +
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI---NPNVV----------- 326
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL-LY 119
T+S++++ ++ EG + A +L +M + YS LING R EAK L
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 120 IASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 178
I+ D F P+ Y+ L++ C + +EL ++ S R L + T
Sbjct: 387 ISKDCF---PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT----------- 432
Query: 179 TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
YN LI ++ + A ++ +MV G P + + L+ L
Sbjct: 433 -----------YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 100/253 (39%), Gaps = 46/253 (18%)
Query: 4 MGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED--- 60
+G PN V Y+T+I C+ G++ A ++ + I D TY+SL+ L +
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRP-DVVTYNSLITRLFHSGTWG 236
Query: 61 -------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 101
T+S++++ Y EG + A + ++M + + V Y+ LI
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 102 NGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDL 161
NGL EAK+ L + S GF P+ Y+ L+ Y
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFF--PNAVTYN---------------TLINGYCKAKR 339
Query: 162 SDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPH 221
DD M ++ DG+ T YN L +C++ A + MV G P
Sbjct: 340 VDDGMKILCVM--SRDGVDGDTFT----YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPD 393
Query: 222 MFSVLALISALDD 234
M++ L+ L D
Sbjct: 394 MYTFNILLDGLCD 406
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 112/254 (44%), Gaps = 30/254 (11%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M MG+SP+ +++S +I + + G+L +E + + + +++
Sbjct: 245 MMRMGISPDVITFSALIDVYGKEGQL-------LEAKKQYNEMIQRSVNPNIV------- 290
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TY+S++N G + A ++ + + G+ + V Y+ LING K R + + L +
Sbjct: 291 TYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM 350
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEF----KSLVELVKD------YSMRDLSD---DAA 166
+ DG + ++T Y+ L + C +F K L +V Y+ L D D
Sbjct: 351 SRDG-VDGDTFT-YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHG 408
Query: 167 TAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 226
++ L++ + YN++I C++ V A+ ++ + G +P + + +
Sbjct: 409 KIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYI 468
Query: 227 ALISALDDDRMYNE 240
++ L R++ E
Sbjct: 469 TMMIGLRRKRLWRE 482
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 100/193 (51%), Gaps = 27/193 (13%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M +GL P+ ++Y+++I+G+C G++ A+ L E +D +++S+
Sbjct: 191 MDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEM----------SKHDCVLNSV---- 236
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRD---GYLS-SYVAYSVLINGLHKKARTREAKRD 116
TYS ++ G+M+RAL+L +M ++ G +S + V Y+++I +K R EA
Sbjct: 237 TYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLV 296
Query: 117 LLYIASDGFLSMPSYTVYDILLENC--SNSEFKSLVELVKDYSMR----DLSDDAATAHT 170
L + + G MP+ +L++ ++ + K+L +L+ D ++ LS+ ++A
Sbjct: 297 LDRMGNRG--CMPNRVTACVLIQGVLENDEDVKALSKLI-DKLVKLGGVSLSECFSSATV 353
Query: 171 TMLHLKNKTDGEN 183
+++ +K + E
Sbjct: 354 SLIRMKRWEEAEK 366
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 105/260 (40%), Gaps = 25/260 (9%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
+P MGL PN V+Y+T++ G+ G++ A + E D+ W+ D TY LMD
Sbjct: 217 IPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG-WYPDATTYTVLMDG----- 270
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
Y G A + DM ++ + V Y V+I L K+ ++ EA+ +
Sbjct: 271 --------YCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 322
Query: 121 ASDGFLSMPSYT--VYDILLENCSNSEFKSL-VELVKDYSMRDLSDDAATAH-------- 169
F+ S V D L E+ E L +++K+ M D + + H
Sbjct: 323 LERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRV 382
Query: 170 TTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 229
T L ++ + + YN LI C + +A ++ +M P+ F+ LI
Sbjct: 383 TEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLI 442
Query: 230 SALDDDRMYNEMSWVINNTL 249
L + E V+ L
Sbjct: 443 EGLSKNGNVKEGVRVLEEML 462
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 34/227 (14%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M MGL + V Y+++I GFC GEL + L E ++ D+ ++
Sbjct: 238 MKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG------DSPCAI-------- 283
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL-LY 119
TY++++ + G ++ A ++ M G + Y+ LI+GL +T+EA + L L
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 120 IASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAH--------- 169
I D P+ Y+I++ C + VE+V+ R D T +
Sbjct: 344 IEKD---EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 170 ------TTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMY 210
+ +L+L K D YN LI C+ + +H+A ++Y
Sbjct: 401 GDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 109/259 (42%), Gaps = 45/259 (17%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDED--TYDSLMDSLSY 58
M E ++PN V+++ +I F + G+L +A +L E ++I D D TY SL++
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI---DPDIFTYSSLINGFCM 377
Query: 59 ED----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 96
D TY++++N + + ++L +MS+ G + + V
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 97 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKD 155
Y+ LI+G + A+ + SDG P+ Y+ LL+ C N + + + +V +
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGV--HPNIMTYNTLLDGLCKNGKLEKAM-VVFE 494
Query: 156 YSMRDLSDDAATAHTTMLHLKNKT----DGEN----------KTDGGMYNLLIFEHCRSH 201
Y R + + M+ K DG + K D +YN +I CR
Sbjct: 495 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Query: 202 NVHKAYNMYMEMVHYGHAP 220
+A ++ +M G P
Sbjct: 555 LKEEADALFRKMREDGPLP 573
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 83/193 (43%), Gaps = 29/193 (15%)
Query: 6 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL-SYED---- 60
+ N V YSTVI C+ A L E E+K + + TY SL+ L +YE
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP-NVITYSSLISCLCNYERWSDA 314
Query: 61 -----------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 103
T++++++ ++ EG + A +L +M + YS LING
Sbjct: 315 SRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 374
Query: 104 LHKKARTREAKRDL-LYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDL 161
R EAK L I+ D F P+ Y+ L+ C VEL ++ S R L
Sbjct: 375 FCMHDRLDEAKHMFELMISKDCF---PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 162 SDDAATAHTTMLH 174
+ T +TT++H
Sbjct: 432 VGNTVT-YTTLIH 443
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 39/233 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + G+ P+ ++YS +I FC+ G A +L + ++ I + D
Sbjct: 102 MHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI---NPDVV----------- 147
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
T+S+++N + EG + A ++ DM R G + + Y+ +I+G K+ R +AKR L +
Sbjct: 148 TFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSM 207
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
AS P + L+ C + +E+ + R + + T
Sbjct: 208 ASKS--CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT------------ 253
Query: 180 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
Y LI C+ ++ A ++ M+ G AP+ + +++++L
Sbjct: 254 ----------YTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 85/178 (47%), Gaps = 26/178 (14%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E ++P+ V++S +I+ + G++ +A E+ + + I+ TY+S++D +D
Sbjct: 137 MIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT-TITYNSMIDGFCKQD 195
Query: 61 ----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
T+S+++N Y + +++ +M R G +++ V Y+
Sbjct: 196 RLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 255
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKD 155
LI+G + +A +DLL + ++ P+Y + +L + CS E + +++D
Sbjct: 256 TLIHGFCQVGDL-DAAQDLLNVMISSGVA-PNYITFQSMLASLCSKKELRKAFAILED 311
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 39/233 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
MP + PN VSYSTVI GF + G +A L E I LD +Y++L+
Sbjct: 400 MPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI-ALDRVSYNTLL------S 452
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
Y+ V G + AL + +M+ G V Y+ L+ G K+ + E K+ +
Sbjct: 453 IYTKV-------GRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 121 ASDGFLSMPSYTVYDILLENCSNSE-FKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
+ L P+ Y L++ S +K +E+ +++ L D
Sbjct: 506 KREHVL--PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV------------- 550
Query: 180 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
+Y+ LI C++ V A ++ EM G +P++ + ++I A
Sbjct: 551 ---------LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G+ PN ++YS++IS C G A L + ++ I +L+
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI-------NPNLV------- 324
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL-LY 119
T+S++++ ++ +G + +A +L +M + + YS LING R EAK+ L L
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 120 IASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH 174
I D +P+ Y+ L+ C +EL ++ S R L + T +TT++H
Sbjct: 385 IRKD---CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT-YTTLIH 436
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 18/152 (11%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + + PN +YS++I+GFC + LG+A ++ +E + D L
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM-LELMIRK-------------DCLPNVV 394
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TY++++N + + + ++L +MS+ G + + V Y+ LI+G + A+ +
Sbjct: 395 TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEF-KSLV 150
S G P+ Y+ILL+ C N + K++V
Sbjct: 455 VSVGV--HPNILTYNILLDGLCKNGKLAKAMV 484
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
GL PN VSYST++ FC+ G + +A + ++ + + E TY+S
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL--------------VPNEYTYTS 407
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 124
+++ GN+ A +L ++M + G + V Y+ LI+GL R +EA+ L+ D
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE--LFGKMDT 465
Query: 125 FLSMPSYTVYDILL 138
+P+ Y+ L+
Sbjct: 466 AGVIPNLASYNALI 479
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 46/260 (17%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M +GL PN +Y+++I C+IG L A+ L E + W + TY +L+D L +
Sbjct: 393 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW-NVVTYTALIDGLCDAE 451
Query: 61 ----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
+Y+++++ ++ NM RAL+L +++ G + Y
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFL--SMPSYTVYDILLENCSNSEFKSLVELVKDY 156
I GL + AK + + G S+ T+ D ++ + +E L++
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD----- 566
Query: 157 SMRDLSDDAATAHTTML---HLKNK-------------TDGENKTDGGMYNLLIFEHCRS 200
M++L + +L KNK D + + ++ +I C+
Sbjct: 567 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626
Query: 201 HNVHKAYNMYMEMVHYGHAP 220
+ V A ++ +MV G P
Sbjct: 627 NQVEAATTLFEQMVQKGLVP 646
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 43/221 (19%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E G++PN +Y+ +I GFC G A L + ++ I D L
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI------NPDVL-------- 367
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
T++++++ + EG + A +L +M V Y+ +I G K R +AK +
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
AS P ++ +++ C ++L+++ S R L A+TT
Sbjct: 428 AS------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL-----VANTT-------- 468
Query: 180 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 220
YN LI C N++ A +++ EM+ +G P
Sbjct: 469 ---------TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 108/257 (42%), Gaps = 56/257 (21%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLM------- 53
M E ++P+ ++++ +IS + G+L +A +L E + I+ D TY+S++
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP-DTVTYNSMIYGFCKHN 415
Query: 54 ---------DSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 102
D ++ D T++++++ Y + +QL ++SR G +++ Y+ LI+
Sbjct: 416 RFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH 475
Query: 103 GLHKKARTREAKRDLLYIASDGFLSM------PSYTVYDILLEN-CSNSEFKSLVELVKD 155
G + D L A D F M P +ILL C N + + +EL +
Sbjct: 476 GF--------CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 156 YSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVH 215
M + D YN++I C+ V +A++++ +
Sbjct: 528 IQMSKIDLDTVA----------------------YNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 216 YGHAPHMFSVLALISAL 232
+G P + + +IS
Sbjct: 566 HGVEPDVQTYNVMISGF 582
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 3 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED-- 60
+GL P+ V+Y+TVI G+ + G+ A L YD ++ Y
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNL----------------YDEMLRKRLYPSVI 586
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TY ++ + G +++A Q +M + G + + ++ L+ G+ K EA R L +
Sbjct: 587 TYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM 646
Query: 121 ASDGFLSMPSYTVYDILL-ENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 177
+G P+ Y +L+ +NC +++ +V+L K+ +++ D T HL+
Sbjct: 647 EEEGI--PPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 39/233 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E G+ PN ++Y+ +I FC G A +L +K I + D
Sbjct: 36 MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQI---NPDIV----------- 81
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
T+S+++N ++ E + A ++ +M R + + Y+ +I+G K+ R +AKR L +
Sbjct: 82 TFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSM 141
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
AS G P + L+ C + +E+ + R + + T
Sbjct: 142 ASKG--CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT------------ 187
Query: 180 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
Y LI C+ ++ A ++ EM+ G AP + +++ L
Sbjct: 188 ----------YTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 230
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G+ PN V+Y+++I+ C G A L +K I + T+++L+D+
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP-NVVTFNALIDA----- 337
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
+ EG + A +L +M + + Y++LING R EAK+ ++
Sbjct: 338 --------FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH 174
S L P+ Y+ L+ C + VEL ++ S R L + T +TT++
Sbjct: 390 VSKDCL--PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT-YTTIIQ 441
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 41/240 (17%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E G++PN +Y+ +I GFC G A L + ++ I D L
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI------NPDVL-------- 367
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
T++++++ + EG + A +L +M V Y+ +I G K R +AK +
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 121 ASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD 180
AS ++ T+ D+ C ++L+++ S R L A+TT
Sbjct: 428 ASPDVVTFN--TIIDVY---CRAKRVDEGMQLLREISRRGL-----VANTT--------- 468
Query: 181 GENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 240
YN LI C N++ A +++ EM+ +G P + L+ ++ E
Sbjct: 469 --------TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 108/257 (42%), Gaps = 56/257 (21%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLM------- 53
M E ++P+ ++++ +IS + G+L +A +L E + I+ D TY+S++
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF-PDTVTYNSMIYGFCKHN 415
Query: 54 ---------DSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 102
D ++ D T++++++ Y + +QL ++SR G +++ Y+ LI+
Sbjct: 416 RFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH 475
Query: 103 GLHKKARTREAKRDLLYIASDGFLSM------PSYTVYDILLEN-CSNSEFKSLVELVKD 155
G + D L A D F M P +ILL C N + + +EL +
Sbjct: 476 GF--------CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 156 YSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVH 215
M + D YN++I C+ V +A++++ +
Sbjct: 528 IQMSKIDLDTVA----------------------YNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 216 YGHAPHMFSVLALISAL 232
+G P + + +IS
Sbjct: 566 HGVEPDVQTYNVMISGF 582
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 14/113 (12%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G+ PNA++Y+ +I +C+ G++ +A +L+ E +D D+Y
Sbjct: 495 MSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG---MDPDSY----------- 540
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 113
TY+S+++ N+ A++L +M G + V Y+V+I+GL K ++ EA
Sbjct: 541 TYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 97/230 (42%), Gaps = 39/230 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
+ E GLSP++ +Y +I G C++GE+G A L E + K + + + +++L+D
Sbjct: 355 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV-NITQVVFNTLIDG----- 408
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
Y +G + A + M + G+ + + + + ++ R EAK+ L +
Sbjct: 409 --------YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 121 ASDGF-LSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
G LS SYT +++ C + L + S + + +A T
Sbjct: 461 MEGGVKLSTVSYT--NLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAIT------------ 506
Query: 180 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 229
YN++I+ +C+ + +A + M G P ++ +LI
Sbjct: 507 ----------YNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 6 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 65
+SPNAV+Y++VI+GFC+ G L A ++ D S +D E TY ++
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLAERIR------------GDMVKSGVD--CNERTYGAL 332
Query: 66 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 125
++ Y G+ AL+L +M+ G + + V Y+ ++ L + E +L +
Sbjct: 333 VDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDI-EGAMSVLRDMNSKN 391
Query: 126 LSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH 174
+ + +T ++ C N K VE + S + L +D H T++H
Sbjct: 392 MQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVED-IVCHNTLMH 439
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 98/246 (39%), Gaps = 46/246 (18%)
Query: 12 SYSTVISGFCQIGELGKAYELKIE--------------------TEDKAIWWLDEDTYDS 51
+ + V+ G C+ G + +A E + + DK + D+
Sbjct: 398 TQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSM 457
Query: 52 LMDSLSYED-TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKART 110
L+ LS + ++ ++++ YL EG ++RAL++ M + S+ V Y+ ++NGL K+
Sbjct: 458 LVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMA 517
Query: 111 REAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHT 170
A+ A + + Y+ LL E +K ++ + D
Sbjct: 518 GAAE------AVVNAMEIKDIVTYNTLLN-----------ESLKTGNVEEADD------- 553
Query: 171 TMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALIS 230
+L K DGE +N++I C+ + KA + MV G P + LI+
Sbjct: 554 -ILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLIT 612
Query: 231 ALDDDR 236
+ R
Sbjct: 613 SFSKHR 618
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 93/246 (37%), Gaps = 42/246 (17%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E G + V+ + ++ G C GEL KA E+ K + +L +S
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV-----KGMRVHGSAALGNLGNS----- 506
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
Y +++D L E N L + YS L+NGL K R EAK L+
Sbjct: 507 -YIGLVDDSLIENNC---------------LPDLITYSTLLNGLCKAGRFAEAKN--LFA 548
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
G P Y+I + + C + S ++KD + T ++ +L L K
Sbjct: 549 EMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKN 608
Query: 180 D--------GENKTDG-----GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 226
E K G YN I C V A N+ EM+ AP++FS
Sbjct: 609 QIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFK 668
Query: 227 ALISAL 232
LI A
Sbjct: 669 YLIEAF 674
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/302 (18%), Positives = 119/302 (39%), Gaps = 45/302 (14%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
MPE G PN ++ ++ G+C+ G K EL E + L +
Sbjct: 173 MPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGV--------------LPNKV 218
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
Y+++++ + EG + ++ M +G + V ++ I+ L K+ + +A R +
Sbjct: 219 IYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM 278
Query: 121 ASDGFLSM--PSYTVYDILLENCSN----SEFKSLVELVKDYSMRDLSDDAATAHTTMLH 174
D +L + P+ Y+++L+ + K+L E +++ +DD A+ +
Sbjct: 279 ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE------NDDLASLQS---- 328
Query: 175 LKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDD 234
YN+ + R +A + +M G P ++S L+ L
Sbjct: 329 ---------------YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCK 373
Query: 235 DRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEMAMDSLLLDGGK 294
M ++ ++ R+ D+ L + ++ A +L EM ++ L +
Sbjct: 374 LGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433
Query: 295 CS 296
C+
Sbjct: 434 CN 435
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 28/261 (10%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
G + VSY+T+ISG C +L D+A +LDE L +Y TYS
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKL-----------DEAFMFLDEMVKRGLKPD-NY--TYSI 580
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 124
++ ++ A+Q D R+G L YSV+I+G K RT E + + S
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 125 FLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN 183
P+ VY+ L+ C + +EL +D + +S ++AT + + + + E
Sbjct: 641 V--QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 184 KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMV-HYGHAPHMFSVLALISALDDDRMY-NEM 241
L+FE R + Y ++ YG M V L+ + ++ N++
Sbjct: 699 AK-------LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 242 SW--VINNTLRSCNLSDSEQL 260
++ +I R N++++ +L
Sbjct: 752 TYTVMIGGYARDGNVTEASRL 772
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 28/261 (10%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
G + VSY+T+ISG C +L D+A +LDE L +Y TYS
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKL-----------DEAFMFLDEMVKRGLKPD-NY--TYSI 580
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 124
++ ++ A+Q D R+G L YSV+I+G K RT E + + S
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 125 FLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN 183
P+ VY+ L+ C + +EL +D + +S ++AT + + + + E
Sbjct: 641 V--QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 184 KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMV-HYGHAPHMFSVLALISALDDDRMY-NEM 241
L+FE R + Y ++ YG M V L+ + ++ N++
Sbjct: 699 AK-------LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 242 SW--VINNTLRSCNLSDSEQL 260
++ +I R N++++ +L
Sbjct: 752 TYTVMIGGYARDGNVTEASRL 772
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 25/167 (14%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E G PN VS++T+I GF G++ + ++ E + + E T + L+D L E
Sbjct: 254 MKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRF-SEATCEILVDGLCREG 312
Query: 61 T----------------------YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
Y S++ E RA+++ ++ + G ++A +
Sbjct: 313 RVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACT 372
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSE 145
L+ GL K RT +A + + + G L P +++LL + +S+
Sbjct: 373 TLVEGLRKSGRTEKASGFMEKMMNAGIL--PDSVTFNLLLRDLCSSD 417
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 94/232 (40%), Gaps = 37/232 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E G + +Y+ VI GFC+ G++ KAY+L E + K + TY S++D L+ D
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG-FEPTVVTYGSVIDGLAKID 636
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
L E + ++L+ V YS LI+G K R EA L +
Sbjct: 637 RLDEAY--MLFEEAKSKRIELN-----------VVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 121 ASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD 180
G P+ ++ LL+ LVK + ++A +M LK +
Sbjct: 684 MQKGL--TPNLYTWNSLLD-----------ALVKAEEI----NEALVCFQSMKELKCTPN 726
Query: 181 GENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
Y +LI C+ +KA+ + EM G P S +IS L
Sbjct: 727 QVT------YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 91/233 (39%), Gaps = 39/233 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M EM + P+ V+Y+++I C+ ++GKA L +E K + T+ LM L
Sbjct: 212 MLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL-LEDMIKKRIRPNAVTFGLLMKGLC--- 267
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
+G A +L DM G V Y +L++ L K+ R EAK LL
Sbjct: 268 ----------CKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAK--LLLG 315
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
P +Y+IL+ + C+ ++ + M+ +AAT
Sbjct: 316 EMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAAT------------ 363
Query: 180 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
Y ++I CR + N+ M+ H P + + +++ L
Sbjct: 364 ----------YRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGL 406
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 97/251 (38%), Gaps = 41/251 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G P+AVSY+TVIS C++G + + EL E Y++L++ L E
Sbjct: 207 MSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVV------SVYNALINGLCKEH 260
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
Y A +L +M G + ++YS LIN L + A
Sbjct: 261 DYKG-------------AFELMREMVEKGISPNVISYSTLINVLCNSGQIELA------- 300
Query: 121 ASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD 180
++ +L+ + +L LVK +R + DA M+
Sbjct: 301 ----------FSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR-----G 345
Query: 181 GENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 240
+ + YN L+ C N+ KA +++ M G +P++ + +LI+ +
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 241 MSWVINNTLRS 251
++ N L S
Sbjct: 406 AVYIWNKMLTS 416
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 45/236 (19%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E G P+ V Y+ ++SG+ G++ AY+L + + + + + Y L+ +L D
Sbjct: 278 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG-FEPNANCYTVLIQALCKVD 336
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
M+ A+++ +M R + V Y+ L++G K + D YI
Sbjct: 337 -------------RMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKI-----DKCYI 378
Query: 121 ASDGFLS---MPSYTVY-DILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLK 176
D + MPS Y I++ + F+ +EL++ MR +
Sbjct: 379 VLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELME--KMRQI--------------- 421
Query: 177 NKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
E D G+YN++I C+ V +A ++ EM G +P + + + +I+ L
Sbjct: 422 -----EYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL 472
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 37/239 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M GL + V+Y+ ++ G+ + +L K +EL E I D TY+ L+ S+
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS-PDVATYNILIHSM---- 523
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
V+ Y+ E N ++ ++ R G++ S +A++ +I G K+ +EA Y+
Sbjct: 524 ----VVRGYIDEAN-----EIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM 574
Query: 121 ASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD 180
A L M V CS L+ Y + A +L D
Sbjct: 575 AD---LRMKPDVV------TCS--------ALLHGYCKAQRMEKAIVLFNKLL------D 611
Query: 181 GENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYN 239
K D +YN LI +C ++ KA + MV G P+ + AL+ L+ R N
Sbjct: 612 AGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVN 670
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 41/268 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKA----YELKIE--TEDKAIWWLDEDTYDS--- 51
M G+ P+ V+++ I C+ G L +A ++LK+ ++D D +
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 52 ------LMDSLSYED---TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 102
L+ S YSS +++ + G+M RA + ++ G L V Y+ +I+
Sbjct: 357 PEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMID 416
Query: 103 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLS 162
G RT +A + + G + PS T IL+ C S F S+
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSG--NPPSLTTSTILIGAC--SRFGSI------------- 459
Query: 163 DDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM 222
DA + M KT+G K D YN L+ + ++H ++K + + EM G +P +
Sbjct: 460 SDAESVFRNM-----KTEGL-KLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDV 513
Query: 223 FSVLALISALDDDRMYNEMSWVINNTLR 250
+ LI ++ +E + +I+ +R
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIR 541
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 37/239 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M GL + V+Y+ ++ G+ + +L K +EL E I D TY+ L+ S+
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS-PDVATYNILIHSM---- 523
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
V+ Y+ E N ++ ++ R G++ S +A++ +I G K+ +EA Y+
Sbjct: 524 ----VVRGYIDEAN-----EIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM 574
Query: 121 ASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD 180
A L M V CS L+ Y + A +L D
Sbjct: 575 AD---LRMKPDVV------TCS--------ALLHGYCKAQRMEKAIVLFNKLL------D 611
Query: 181 GENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYN 239
K D +YN LI +C ++ KA + MV G P+ + AL+ L+ R N
Sbjct: 612 AGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVN 670
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 41/268 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKA----YELKIE--TEDKAIWWLDEDTYDS--- 51
M G+ P+ V+++ I C+ G L +A ++LK+ ++D D +
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 52 ------LMDSLSYED---TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 102
L+ S YSS +++ + G+M RA + ++ G L V Y+ +I+
Sbjct: 357 PEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMID 416
Query: 103 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLS 162
G RT +A + + G + PS T IL+ C S F S+
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSG--NPPSLTTSTILIGAC--SRFGSI------------- 459
Query: 163 DDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM 222
DA + M KT+G K D YN L+ + ++H ++K + + EM G +P +
Sbjct: 460 SDAESVFRNM-----KTEGL-KLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDV 513
Query: 223 FSVLALISALDDDRMYNEMSWVINNTLR 250
+ LI ++ +E + +I+ +R
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIR 541
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 17/167 (10%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G SP V+Y++++ C+ G + +A L E K I + D
Sbjct: 333 MESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKI---EPDNI----------- 378
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
T ++++N Y +M A+++ M G +Y LI+G K AK +L +
Sbjct: 379 TCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSM 438
Query: 121 ASDGFLSMPSYTVYDILLENCSNSEFK-SLVELVKDYSMRDLSDDAA 166
GF P Y Y L++ N + + +L++++ R L D A
Sbjct: 439 IEKGF--SPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVA 483
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 40/266 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M +MG+SP+ +++++++S + G G A++L E + + + D+Y
Sbjct: 164 MKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM--RRTYGVTPDSY----------- 210
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL--- 117
T+++++N + + A ++ DM V Y+ +I+GL + + + A L
Sbjct: 211 TFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGM 270
Query: 118 LYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHL-- 175
L A+D ++ SYT ++ C E V + D R L +A T +T + L
Sbjct: 271 LKKATDVHPNVVSYTT--LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSE 328
Query: 176 -------KNKTDGEN------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM 222
K+ G N D +N+LI HC + ++ A ++ EM++ P
Sbjct: 329 AHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDS 388
Query: 223 FSVLALISAL----DDDR---MYNEM 241
S LI L + DR ++NE+
Sbjct: 389 ASYSVLIRTLCMRNEFDRAETLFNEL 414
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 103/239 (43%), Gaps = 39/239 (16%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
G+ P ++++ +++G C+ G + KA L E + M +Y++
Sbjct: 151 GVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE--------------MGPSPNCVSYNT 196
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY-IASD 123
++ + N+ +AL L + M++ G + V +++++ L +K + LL I
Sbjct: 197 LIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDS 256
Query: 124 GFLSMP-SYTVYDILLENC-SNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDG 181
+ P + IL+++C N +E+ K+ S +++ D+
Sbjct: 257 SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV--------------- 301
Query: 182 ENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 240
+YN++I C S N+ AY +MV G P +F+ LISAL + ++E
Sbjct: 302 -------VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDE 353
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 105/245 (42%), Gaps = 41/245 (16%)
Query: 6 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWL----DEDTYDSLMDSLSYEDT 61
+SP+ +++T+++G+C++G + +E + W + D D + T
Sbjct: 151 VSPDIYTFNTLVNGYCKLGYV-------VEAKQYVTWLIQAGCDPDYF-----------T 192
Query: 62 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 121
Y+S + + + A ++ +M+++G + V+Y+ LI GL + + EA L+ +
Sbjct: 193 YTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMK 252
Query: 122 SDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD 180
D P+ Y +L++ C + + + L K S + D +T ++ D
Sbjct: 253 DDN--CCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDC-MYTVLIQSFCSGD 309
Query: 181 GENKTDGGM--------------YNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 226
++ G + YN LI C+ NVHKA + +M+ P + +
Sbjct: 310 TLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYN 368
Query: 227 ALISA 231
LI+
Sbjct: 369 TLIAG 373
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 18/115 (15%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E G+ ++S VI G C+ G+L + Y + +++++ S +
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTV----------------FENMIRKGSKPN 361
Query: 61 T--YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 113
Y+ +++ Y G+++ A++L H M +G+ V YSV++NGL K R EA
Sbjct: 362 VAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
G PN VSY+ +++G C+ G+ +A E+ +E+ WW + +S+ TYS
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEH--WW----SPNSI--------TYSV 529
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 124
+M+ EG + A + +M G+ V ++L+ L + RT EA++ + + G
Sbjct: 530 IMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 589
Query: 125 F-LSMPSYTVYDILLENCSNSEFKSLVELVKD 155
+++ ++T ++ C N E + + ++ D
Sbjct: 590 CAINVVNFTT--VIHGFCQNDELDAALSVLDD 619
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 51/239 (21%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E G PN V+Y+ +I GF IG++ EL K + + +Y
Sbjct: 770 MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV-------------APNYV- 815
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TY +++ G + A L +M + + + Y +I G +K+ +I
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE-----------FI 864
Query: 121 ASDGFL-------SMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTML 173
S G L + P +VY +L++N L++ + L ++ AT T++
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDN--------LIKAQRLEMALRLLEEVATFSATLV 916
Query: 174 HLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
+ YN LI C ++ V A+ ++ EM G P M S +LI L
Sbjct: 917 DYSS-----------TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 25/162 (15%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMD---SLSYEDT 61
G PN + Y +I G C++G+L +A E+K E + + TY SL+D + +D
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG-FPATLYTYSSLIDRYFKVKRQDL 727
Query: 62 YSSVMNDYLAE-------------------GNMQRALQLDHDMSRDGYLSSYVAYSVLIN 102
S V++ L G A +L M G + V Y+ +I+
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 103 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNS 144
G + L + S G P+Y Y +L+++C +
Sbjct: 788 GFGMIGKIETCLELLERMGSKGV--APNYVTYRVLIDHCCKN 827
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 99/234 (42%), Gaps = 33/234 (14%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKA---YELKIETEDKAIWWLDEDTYDSLMDSLSYED- 60
G PN V+YS +I G C+ G++ KA +E ++D D D Y D S
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP----DVDMYFKQYDDNSERPN 638
Query: 61 --TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 118
TY ++++ + ++ A +L MS +G + + Y LI+GL K + EA+
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 119 YIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 178
++ GF P+ T+Y + SL++ +DL A+ + ML
Sbjct: 699 EMSEHGF---PA-TLYT----------YSSLIDRYFKVKRQDL---ASKVLSKML----- 736
Query: 179 TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
+ + +Y +I C+ +AY + M G P++ + A+I
Sbjct: 737 -ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 89/227 (39%), Gaps = 39/227 (17%)
Query: 6 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 65
L PN V + T++ GFC+ EL A L + + +D + Y Y+ +
Sbjct: 300 LLPNVVVFGTLVDGFCKARELVTARSLFVHMVK---FGVDPNLY-----------VYNCL 345
Query: 66 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 125
++ + GNM A+ L +M Y++LINGL + + EA R + ++
Sbjct: 346 IHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 126 LSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENK 184
PS Y+ L+ C + ++L + + + + T T +
Sbjct: 406 F--PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI------------ 451
Query: 185 TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA 231
DG +C ++ A +Y EM G P + + ALI A
Sbjct: 452 -DG---------YCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M G+ PN +++ST+I G+C + ++ A L E K I D TY +L+D+
Sbjct: 435 MTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP-DVVTYTALIDA----- 488
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR 109
+ E NM+ AL+L DM G + ++ L++G K+ R
Sbjct: 489 --------HFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 30/250 (12%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M +G+ PN Y+ I C+ + K+E +K + + ++ +L
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCR--------DNKMEEAEKMFELMKKH---GVLPNLY--- 270
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TYS++++ Y GN+++A L ++ L + V + L++G K AR R L ++
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK-ARELVTARSL-FV 328
Query: 121 ASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMRDLSDDAATAHTTM--LHLKN 177
F P+ VY+ L+ +C + V L+ + +LS D T + L +++
Sbjct: 329 HMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED 388
Query: 178 KTDGENK-----------TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 226
+ N+ YN LI +C+ +N+ +A ++ EM G P++ +
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448
Query: 227 ALISALDDDR 236
LI + R
Sbjct: 449 TLIDGYCNVR 458
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E+G+ P + ++T+I G + G+L + +++DE +
Sbjct: 318 MREVGVEPGVIHFTTLIDGLSRAGKL-----------EACKYFMDETVKVGCTPDVV--- 363
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
Y+ ++ Y++ G +++A ++ +M+ G L + Y+ +I G + +EA L +
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Query: 121 ASDGFLSMPSYTVYDILLENCSNS-EFKSLVELVKD 155
S G P++ VY L+ N N+ + E+VKD
Sbjct: 424 ESRG--CNPNFVVYSTLVNNLKNAGKVLEAHEVVKD 457
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 108/249 (43%), Gaps = 37/249 (14%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSL-SYE 59
M E ++P+ V ++ +I F + G+L +A E YD ++ S +
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEA----------------EKLYDEMVKSKHCFP 354
Query: 60 DT--YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL 117
D Y++++ + ++ +++ +MS+ G + + V Y+ LI+G + A+
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 118 LYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLK 176
+ SDG P Y+ILL+ C+N ++ + + + RD+ D T +TTM+
Sbjct: 415 KQMVSDGV--HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT-YTTMIEAL 471
Query: 177 NKT----DGEN----------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM 222
K DG + K + Y ++ CR +A +++EM G P+
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531
Query: 223 FSVLALISA 231
+ LI A
Sbjct: 532 GTYNTLIRA 540
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 89/244 (36%), Gaps = 30/244 (12%)
Query: 3 EMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 62
+ GL P Y+ +ISGFC+IG Y E I W + + S+ Y
Sbjct: 241 KQGLDPGQYVYAKLISGFCEIGN----YACMSEVLHTMIAW---NHFPSMY-------IY 286
Query: 63 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 122
++ A + ++ GY V Y+ +I G +K A++ +
Sbjct: 287 QKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIK 346
Query: 123 DGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH-------- 174
G P+ Y++++ SLVE + +R+ + TM+
Sbjct: 347 KGM--RPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKS 404
Query: 175 ------LKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLAL 228
KN ++ + YN LI C+ + V K +Y E+ G P + AL
Sbjct: 405 DEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAAL 464
Query: 229 ISAL 232
+ L
Sbjct: 465 VRNL 468
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 38/226 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M ++G+ P +YS +I G+ + G+ +A EDT+ ++ S + D
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREEA----------------EDTFSCMLRSGTKPD 507
Query: 61 TYS-SVMNDYLAEGNMQR-ALQLDHDMSRDGYLSSYVAYSVLINGLHKKART---REAKR 115
+ SVM D L GN R A L DM DG+ SY Y ++I GL K+ R+ ++ R
Sbjct: 508 NLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIR 567
Query: 116 DLLYIASDGFLSMPSYTV-----------YDILLENCSNSEFKSLVELVKDYSMRDLSDD 164
D+ + L + S V + + N E +L+ ++ YS S
Sbjct: 568 DMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSS---SGR 624
Query: 165 AATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMY 210
+ A + LK G + + LI HC+ +N+ A + Y
Sbjct: 625 HSEAFELLEFLKEHASGSKRL---ITEALIVLHCKVNNLSAALDEY 667
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 132/323 (40%), Gaps = 52/323 (16%)
Query: 7 SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED------ 60
P+ +Y+ +IS + + G +A L +E E K ++ D TY+SL+ + + E
Sbjct: 329 QPDLWTYNAMISVYGRCGLAAEAERLFMELELKG-FFPDAVTYNSLLYAFARERNTEKVK 387
Query: 61 ----------------TYSSVMNDYLAEGNMQRALQLDHDMSR-DGYLSSYVAYSVLING 103
TY+++++ Y +G + ALQL DM G + Y+VLI+
Sbjct: 388 EVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDS 447
Query: 104 LHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSD 163
L K RT EA + + G P+ Y L+ C Y+ +
Sbjct: 448 LGKANRTVEAAALMSEMLDVGI--KPTLQTYSALI--CG-------------YAKAGKRE 490
Query: 164 DAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMF 223
+A + ML K D Y++++ R + KA+ +Y +M+ GH P
Sbjct: 491 EAEDTFSCMLR------SGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYT 544
Query: 224 SVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSE---INVTKSEIYALLDVL 280
+I L + +++ I + C ++ E VL + ++ ++ +
Sbjct: 545 LYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNG 604
Query: 281 AEMAMDSLLLDGGKCSYAPASRH 303
E+ D+LL G SY+ + RH
Sbjct: 605 YELENDTLLSILG--SYSSSGRH 625
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 33/245 (13%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + G+ P++V+Y+ + GF +G + A+E+ + DK L D
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG---LSPDVI----------- 328
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGY-LSSYVAYSVLINGLHKKARTREAKRDLLY 119
TY+ ++ GN+ L L DM G+ L+S + SV+++GL K R EA
Sbjct: 329 TYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQ 388
Query: 120 IASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 178
+ +DG P Y I++ C +F + L + + + ++ T +L L K
Sbjct: 389 MKADGL--SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQK 446
Query: 179 --------------TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFS 224
+ GE D +YN++I + +S + +A ++ ++ G P + +
Sbjct: 447 GMLLEARSLLDSLISSGET-LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 505
Query: 225 VLALI 229
+LI
Sbjct: 506 FNSLI 510
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 33/245 (13%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + G+ P++V+Y+ + GF +G + A+E+ + DK L D
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG---LSPDVI----------- 328
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGY-LSSYVAYSVLINGLHKKARTREAKRDLLY 119
TY+ ++ GN+ L L DM G+ L+S + SV+++GL K R EA
Sbjct: 329 TYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQ 388
Query: 120 IASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 178
+ +DG P Y I++ C +F + L + + + ++ T +L L K
Sbjct: 389 MKADGL--SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQK 446
Query: 179 --------------TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFS 224
+ GE D +YN++I + +S + +A ++ ++ G P + +
Sbjct: 447 GMLLEARSLLDSLISSGET-LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 505
Query: 225 VLALI 229
+LI
Sbjct: 506 FNSLI 510
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 98/233 (42%), Gaps = 38/233 (16%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E GL P+ V ++ ++SG+ G++ AY+L + + + + + Y L+ +L
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG-FEPNVNCYTVLIQALCR-- 318
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
E M A+++ +M R G + V Y+ LI+G K + L +
Sbjct: 319 ----------TEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDM 368
Query: 121 ASDGFLSMPSYTVY-DILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKT 179
G MPS Y I++ + +F+ +EL++ R H +L
Sbjct: 369 RKKGV--MPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG-------CHPDLL------ 413
Query: 180 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 232
+YN++I C+ V +A ++ EM G +P + + + +I+
Sbjct: 414 ---------IYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGF 457
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 24/228 (10%)
Query: 28 KAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSR 87
K ++L + D W++ + Y S++D+ + +++ EG + A + + +
Sbjct: 149 KKFDLALRAFD---WFMKQKDYQSMLDN----SVVAIIISMLGKEGRVSSAANMFNGLQE 201
Query: 88 DGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSN--SE 145
DG+ +Y+ LI+ R REA + DG P+ Y+++L +
Sbjct: 202 DGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG--CKPTLITYNVILNVFGKMGTP 259
Query: 146 FKSLVELVKDYSMRDLSDDAATAHTTM-------LHLKNKTDGENKTDGGM------YNL 192
+ + LV+ ++ DA T +T + LH + E G YN
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 193 LIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 240
L+ + +SH +A + EMV G +P + + +LISA D M +E
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDE 367
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 22/136 (16%)
Query: 2 PEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYD----------- 50
P+ L PN + Y+ I+G C+ G+L A +L + + DE TY
Sbjct: 711 PKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGD 770
Query: 51 -----SLMDSLSYED------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 99
+L D ++ + TY++++ GN+ RA +L H + + G + + Y+
Sbjct: 771 INKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNT 830
Query: 100 LINGLHKKARTREAKR 115
LI+GL K EA R
Sbjct: 831 LIDGLVKSGNVAEAMR 846
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 111/249 (44%), Gaps = 31/249 (12%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + G+ PN V Y+ ++ C++ + A + E +K L+ + +
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG---LEPNNF----------- 520
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TYS +++ + + Q A + + M+ + ++ V Y+ +INGL K +T +AK L +
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Query: 121 ASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH---LK 176
+ SM S T Y+ +++ + S VE ++ S S + T T++++
Sbjct: 581 IKEKRYSM-SCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVT-FTSLINGFCKS 638
Query: 177 NKTD-----------GENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 225
N+ D E K D Y LI C+ +++ AY ++ E+ G P++
Sbjct: 639 NRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVY 698
Query: 226 LALISALDD 234
+LIS +
Sbjct: 699 NSLISGFRN 707
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 14/117 (11%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
+PE+GL PN Y+++ISGF +G++ A +L + + I D TY +++D L
Sbjct: 686 LPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC-DLFTYTTMIDGL---- 740
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL 117
L +GN+ A L ++ G + + + VL+NGL KK + +A + L
Sbjct: 741 ---------LKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKML 788
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 10/177 (5%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + GL N V+Y+T+I G Q G+ A E+ E + D TY+ L+D L
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPP-DIMTYNILLDGLCK-- 63
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
+ + L G ++ L +S G + V Y+ +I+G KK EA +
Sbjct: 64 --NGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 121 ASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMRDLSDDAATAH--TTMLH 174
DG +P Y+ L+ + + + + EL+K+ + DA+T T MLH
Sbjct: 122 KEDG--PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLH 176
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 104/235 (44%), Gaps = 43/235 (18%)
Query: 6 LSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 65
+ P+ ++Y T++ G C+ G + + YEL +E + K I +D + Y L++
Sbjct: 329 IKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQI-LIDREIYRVLIEG---------- 377
Query: 66 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 125
++A+G ++ A L D+ GY++ Y+ +I GL + +A + L +A +
Sbjct: 378 ---FVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYK-LFQVAIEEE 433
Query: 126 LS---------MPSYTVYDILLENCSNSEFKSLVELVKD--YSMRD---------LSDDA 165
L M +Y V + L S+F +++E + + Y + D +D+
Sbjct: 434 LEPDFETLSPIMVAYVVMNRL------SDFSNVLERIGELGYPVSDYLTQFFKLLCADEE 487
Query: 166 ATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 220
A + KT G +YN+L+ + ++ K+ +++ EM G P
Sbjct: 488 KNAMALDVFYILKTKGHGSVS--VYNILMEALYKMGDIQKSLSLFYEMRKLGFEP 540
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M E+G+ P+ + Y+T+I G+ GEL KA E+ E K L
Sbjct: 715 MKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKG--------------QLPNVF 760
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
TY+S++ G + A L +M G ++V YS L+ L K + EA++ + +
Sbjct: 761 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Query: 121 ASDG 124
G
Sbjct: 821 VKKG 824
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 103/255 (40%), Gaps = 47/255 (18%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYEL-------KIETEDKAIWWLDEDTYDSLM 53
M + G P+ VSY+ +I+G + G++ A E+ + ++KA L +
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 54 DSLSYE---------------DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 98
L+YE Y+++++ + G +++A L MS+ G V Y+
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN 259
Query: 99 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEF-KSLVELVKDYS 157
VL+N + + A+ + + G + + +Y+ +L +C S K +VK+
Sbjct: 260 VLLNYYYDNNMLKRAEGVMAEMVRSG-IQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEME 318
Query: 158 MRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYG 217
R D + Y+ LI CR+ N KAY ++ EM G
Sbjct: 319 PRGFCDVVS-----------------------YSTLIETFCRASNTRKAYRLFEEMRQKG 355
Query: 218 HAPHMFSVLALISAL 232
++ + +LI A
Sbjct: 356 MVMNVVTYTSLIKAF 370
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 52/272 (19%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYEL-KIETEDKAIWWLDEDTYDSLMDSLSYE 59
M E G P+ V+Y+T++S +C+ G L +A+ L KI + + D TY SL+ L +
Sbjct: 262 MEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVP--DLVTYTSLIKGLCKD 319
Query: 60 D----------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAY 97
+Y++++ Y EG MQ++ +L H+M + +
Sbjct: 320 GRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTC 379
Query: 98 SVLINGLHKKAR----------TREAKRDLLY---------IASDGFLSMPSYTVYDILL 138
V++ G ++ R R K D+ + + +G + + I+
Sbjct: 380 KVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIE 439
Query: 139 ENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT-DGGMYNLLIFEH 197
E ++ ++ L++ S D ++A L LK K +N+ D Y LI
Sbjct: 440 EEGHEAKPETYNNLIESLSRCDAIEEA-------LVLKGKLKNQNQVLDAKTYRALIGCL 492
Query: 198 CRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 229
CR +A ++ EM P F AL+
Sbjct: 493 CRIGRNREAESLMAEMFDSEVKPDSFICGALV 524
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 42/223 (18%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYE- 59
M + L PN V+++ ++S C+ + KA E+ ++++ D + +
Sbjct: 194 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEV----------------FENMRDRFTPDS 237
Query: 60 DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY 119
TYS ++ + E N+ +A ++ +M G V YS++++ L K R EA L
Sbjct: 238 KTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEA---LGI 294
Query: 120 IAS-DGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 178
+ S D + P+ +Y + LV Y + ++A T L ++
Sbjct: 295 VRSMDPSICKPTTFIYSV---------------LVHTYGTENRLEEAV---DTFLEMER- 335
Query: 179 TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPH 221
K D ++N LI C+++ + Y + EM G P+
Sbjct: 336 --SGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPN 376
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 33/269 (12%)
Query: 1 MPEMGLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYED 60
M + G A +++ +I C GE G A + + ++ T++ ++
Sbjct: 175 MVQDGFPTTARTFNLLI---CSCGEAGLA-------KQAVVQFMKSKTFNYR----PFKH 220
Query: 61 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 120
+Y++++N L + + M DG+ + Y++L+ ++ + R +
Sbjct: 221 SYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEM 280
Query: 121 ASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTML------- 173
A DGF S SYT Y+ILL K L L M+++ D + H T L
Sbjct: 281 ARDGF-SPDSYT-YNILLHILGKGN-KPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRA 337
Query: 174 --------HLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 225
L + D Y ++I + S + KA M+ EM G P++F+
Sbjct: 338 GNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTY 397
Query: 226 LALISALDDDRMYNEMSWVINN-TLRSCN 253
++I L + E W++ R CN
Sbjct: 398 NSMIRGLCMAGEFREACWLLKEMESRGCN 426
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 16/140 (11%)
Query: 5 GLSPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
G+S N +Y+ ++ G+ +G+ GKA+E +++ LD D + TY +
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG---LDVDIF-----------TYEA 699
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 124
++ G MQ AL + +MS + Y++LI+G ++ EA + + +G
Sbjct: 700 LLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG 759
Query: 125 FLSMPSYTVYDILLENCSNS 144
P Y + CS +
Sbjct: 760 V--KPDIHTYTSFISACSKA 777
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 107/255 (41%), Gaps = 32/255 (12%)
Query: 3 EMGL---SPNAVSYSTVISGFCQIGELGKAYELKIETEDKAIWWLDEDTYDSLMDSLSYE 59
EMG+ +P VSY+TVI + KA+ ++ + W D+ DS+ S E
Sbjct: 363 EMGMWRCTPTVVSYNTVIKALFE----SKAHVSEVSS------WFDKMKADSVSPS---E 409
Query: 60 DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY 119
TYS +++ Y +++AL L +M G+ AY LIN L KA+ EA +L
Sbjct: 410 FTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG-KAKRYEAANELFK 468
Query: 120 IASDGFLSMPSYTVYDILLENCSN-SEFKSLVELVKDYSMRDLSDD--------AATAHT 170
+ F ++ S VY +++++ + V+L + + D +
Sbjct: 469 ELKENFGNVSS-RVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527
Query: 171 TMLH-----LKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 225
M++ L+ + + D +N+++ R+ +A M+ + H G P +
Sbjct: 528 GMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTY 587
Query: 226 LALISALDDDRMYNE 240
L+ M+ E
Sbjct: 588 NTLLGCFAHAGMFEE 602
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 102/242 (42%), Gaps = 34/242 (14%)
Query: 7 SPNAVSYSTVISGFCQIGELGKAYEL--KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS 64
P+ +Y+ +I+GFC++ + A + ++ ++D + D TY+ ++ SL
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD---FSPDTVTYNIMIGSLC------- 204
Query: 65 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 124
+ G + AL++ + + D + + Y++LI + EA + + + S G
Sbjct: 205 ------SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 125 FLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK---TD 180
P Y+ ++ C E+V++ ++ D + + + L N+ +
Sbjct: 259 L--KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316
Query: 181 GEN--------KTDGGM--YNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALIS 230
GE K D + Y++LI CR + +A N+ M G P +S LI+
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376
Query: 231 AL 232
A
Sbjct: 377 AF 378