Miyakogusa Predicted Gene

Lj3g3v1886310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1886310.1 Non Chatacterized Hit- tr|C6TDB6|C6TDB6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.17218 PE,92.91,0,ORF
PROTEIN,Protein of unknown function DUF667; DUF667,Protein of unknown
function DUF667,CUFF.43278.1
         (127 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G12300.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   203   2e-53

>AT3G12300.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 23 plant structures; EXPRESSED
           DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
           Protein of unknown function DUF667 (InterPro:IPR007714);
           Has 373 Blast hits to 371 proteins in 116 species:
           Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 4;
           Plants - 71; Viruses - 0; Other Eukaryotes - 85 (source:
           NCBI BLink). | chr3:3921787-3923092 REVERSE LENGTH=190
          Length = 190

 Score =  203 bits (517), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 94/109 (86%), Positives = 106/109 (97%)

Query: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVVNGHVKRPQDEDIQSNVLEIIGSNIQSTYIT 60
           MFKNTFQSGFLSILYSLGSKPLQIWDKEVV+GHVKR  D+DIQSNVLE++GSNIQSTYIT
Sbjct: 1   MFKNTFQSGFLSILYSLGSKPLQIWDKEVVDGHVKRCHDDDIQSNVLEVVGSNIQSTYIT 60

Query: 61  CPADPAATLGIKLPFLVMIVKNLKKFFTFEIQVLDDKNVRRRFRASNFQ 109
           CPAD +ATLGIKLPFLV++VK++KK+F+FEIQ+LDDKNVRRRFRASNFQ
Sbjct: 61  CPADLSATLGIKLPFLVLVVKDMKKYFSFEIQILDDKNVRRRFRASNFQ 109