Miyakogusa Predicted Gene

Lj3g3v1876170.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1876170.3 Non Chatacterized Hit- tr|I3SLM9|I3SLM9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,86.78,0,RESPONSE_REGULATORY,Signal transduction response
regulator, receiver domain; CheY-like,CheY-like sup,CUFF.43362.3
         (121 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G57040.1 | Symbols: ARR9, ATRR4 | response regulator 9 | chr3...   135   5e-33
AT2G41310.1 | Symbols: ATRR3, ARR8, RR3 | response regulator 3 |...   132   4e-32
AT1G59940.1 | Symbols: ARR3 | response regulator 3 | chr1:220658...   122   7e-29
AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | response regula...   117   1e-27
AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6, RR5 | response regulat...   115   6e-27
AT1G74890.1 | Symbols: ARR15 | response regulator 15 | chr1:2813...   115   6e-27
AT5G62920.1 | Symbols: ARR6 | response regulator 6 | chr5:252527...   112   6e-26
AT1G19050.1 | Symbols: ARR7 | response regulator 7 | chr1:657791...   110   2e-25
AT3G56380.1 | Symbols: ARR17, RR17 | response regulator 17 | chr...   109   5e-25
AT2G40670.1 | Symbols: ARR16, RR16 | response regulator 16 | chr...   103   3e-23
AT2G40670.2 | Symbols: RR16 | response regulator 16 | chr2:16970...    99   7e-22
AT5G07210.1 | Symbols: ARR21, RR21 | response regulator 21 | chr...    55   8e-09
AT2G27070.1 | Symbols: ARR13, RR13 | response regulator 13 | chr...    51   2e-07

>AT3G57040.1 | Symbols: ARR9, ATRR4 | response regulator 9 |
           chr3:21110059-21111228 FORWARD LENGTH=234
          Length = 234

 Score =  135 bits (341), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 77/131 (58%), Positives = 85/131 (64%), Gaps = 28/131 (21%)

Query: 1   MGMATPKETQFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSAS 60
           MGMA   E+QFHVLAVDDSL DR LIERLL+ SS                  VT VDS S
Sbjct: 1   MGMAA--ESQFHVLAVDDSLFDRKLIERLLQKSSCQ----------------VTTVDSGS 42

Query: 61  KALNFLGLVEDMASE----------IHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLK 110
           KAL FLGL +   S            HQ V+VNLIITDYCMPGMTGYDLL+K+KES + +
Sbjct: 43  KALEFLGLRQSTDSNDPNAFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFR 102

Query: 111 DIPVVIMSSEN 121
           DIPVVIMSSEN
Sbjct: 103 DIPVVIMSSEN 113


>AT2G41310.1 | Symbols: ATRR3, ARR8, RR3 | response regulator 3 |
           chr2:17222280-17223536 FORWARD LENGTH=225
          Length = 225

 Score =  132 bits (333), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 83/122 (68%), Gaps = 24/122 (19%)

Query: 8   ETQFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLG 67
           E++FHVLAVDDSL DR +IERLL+ SS                  VT VDS SKAL FLG
Sbjct: 6   ESKFHVLAVDDSLFDRKMIERLLQKSSCQ----------------VTTVDSGSKALEFLG 49

Query: 68  LVED--------MASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSS 119
           L  D         + +IHQ+V++NLIITDYCMPGMTGYDLL+K+KES + + IPVVIMSS
Sbjct: 50  LRVDDNDPNALSTSPQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSS 109

Query: 120 EN 121
           EN
Sbjct: 110 EN 111


>AT1G59940.1 | Symbols: ARR3 | response regulator 3 |
           chr1:22065894-22066895 REVERSE LENGTH=231
          Length = 231

 Score =  122 bits (305), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 79/112 (70%), Gaps = 16/112 (14%)

Query: 10  QFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLGLV 69
           Q HVLAVDDSL+DR++IERLL+ +S                  VTAVDS  +AL FLGL 
Sbjct: 32  QVHVLAVDDSLVDRIVIERLLRITSCK----------------VTAVDSGWRALEFLGLD 75

Query: 70  EDMASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSEN 121
           +D A+     + V+LIITDYCMPGMTGY+LL+KIKES S K++PVVIMSSEN
Sbjct: 76  DDKAAVEFDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSEN 127


>AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | response regulator
           4 | chr1:3442624-3443759 REVERSE LENGTH=259
          Length = 259

 Score =  117 bits (294), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 78/112 (69%), Gaps = 16/112 (14%)

Query: 10  QFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLGLV 69
           + HVLAVDDSL+DR++IERLL+ +S                  VTAVDS  +AL FLGL 
Sbjct: 33  EVHVLAVDDSLVDRIVIERLLRITSCK----------------VTAVDSGWRALEFLGLD 76

Query: 70  EDMASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSEN 121
            + AS     + V+LIITDYCMPGMTGY+LL+KIKES + +++PVVIMSSEN
Sbjct: 77  NEKASAEFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSEN 128


>AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6, RR5 | response regulator
           5 | chr3:17759112-17760740 REVERSE LENGTH=184
          Length = 184

 Score =  115 bits (288), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 65/121 (53%), Positives = 84/121 (69%), Gaps = 19/121 (15%)

Query: 2   GMATPKETQFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASK 61
            +A+PK    HVLAVDDS++DR  IERLL+ SS             C    VT VDSA++
Sbjct: 18  SLASPK--LLHVLAVDDSMVDRKFIERLLRVSS-------------C---KVTVVDSATR 59

Query: 62  ALNFLGL-VEDMASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSE 120
           AL +LGL  E+ +S   +D+ +NLI+TDY MPGMTGY+LL+KIKES + ++IPVVIMSSE
Sbjct: 60  ALQYLGLDGENNSSVGFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSE 119

Query: 121 N 121
           N
Sbjct: 120 N 120


>AT1G74890.1 | Symbols: ARR15 | response regulator 15 |
           chr1:28131590-28132710 REVERSE LENGTH=206
          Length = 206

 Score =  115 bits (288), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/112 (54%), Positives = 78/112 (69%), Gaps = 16/112 (14%)

Query: 10  QFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLGLV 69
           + HVLAVDDS +DR +IERLLK S+             C    VT V+S ++AL +LGL 
Sbjct: 17  ELHVLAVDDSFVDRKVIERLLKISA-------------C---KVTTVESGTRALQYLGLD 60

Query: 70  EDMASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSEN 121
            D  S   +D+ VNLI+TDY MPG+TGY+LL+KIKES +L++IPVVIMSSEN
Sbjct: 61  GDNGSSGLKDLKVNLIVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSEN 112


>AT5G62920.1 | Symbols: ARR6 | response regulator 6 |
           chr5:25252745-25254158 REVERSE LENGTH=186
          Length = 186

 Score =  112 bits (279), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 76/111 (68%), Gaps = 16/111 (14%)

Query: 11  FHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLGLVE 70
            HVLAVDDS +DR  IERLL+ SS             C    VT VDSA++AL +LGL  
Sbjct: 25  LHVLAVDDSHVDRKFIERLLRVSS-------------C---KVTVVDSATRALQYLGLDV 68

Query: 71  DMASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSEN 121
           +  S   +D+ VNLI+TDY MPGMTGY+LL+KIKES + +++PVVIMSSEN
Sbjct: 69  EEKSVGFEDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSEN 119


>AT1G19050.1 | Symbols: ARR7 | response regulator 7 |
           chr1:6577919-6579078 REVERSE LENGTH=206
          Length = 206

 Score =  110 bits (275), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/112 (50%), Positives = 76/112 (67%), Gaps = 16/112 (14%)

Query: 10  QFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLGLV 69
           + HVLAVDDS++DR +IERLL+ SS                  VT V+S ++AL +LGL 
Sbjct: 23  ELHVLAVDDSIVDRKVIERLLRISSCK----------------VTTVESGTRALQYLGLD 66

Query: 70  EDMASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSEN 121
               +   +D+ VNLI+TDY MPG++GYDLL+KIKES + +++PVVIMSSEN
Sbjct: 67  GGKGASNLKDLKVNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSEN 118


>AT3G56380.1 | Symbols: ARR17, RR17 | response regulator 17 |
           chr3:20905480-20906368 FORWARD LENGTH=153
          Length = 153

 Score =  109 bits (272), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/115 (50%), Positives = 78/115 (67%), Gaps = 17/115 (14%)

Query: 8   ETQFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLG 67
           E + HVLAVDD+LIDR L+ER+LK SS                  VT  ++  +AL +LG
Sbjct: 17  EEELHVLAVDDNLIDRKLVERILKISSCK----------------VTTAENGLRALEYLG 60

Query: 68  LVEDMASEIHQDV-DVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSEN 121
           L +   ++   +V  VNLIITDYCMPGMTG++LL+K+KES +LK++PVVI+SSEN
Sbjct: 61  LGDPQQTDSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSEN 115


>AT2G40670.1 | Symbols: ARR16, RR16 | response regulator 16 |
           chr2:16970258-16971120 FORWARD LENGTH=164
          Length = 164

 Score =  103 bits (256), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 59/122 (48%), Positives = 80/122 (65%), Gaps = 29/122 (23%)

Query: 8   ETQFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLG 67
           + + HVLAVDD+LIDR L+ERLLK S              C +  VT  ++A +AL +LG
Sbjct: 26  DEELHVLAVDDNLIDRKLVERLLKIS--------------CCK--VTTAENALRALEYLG 69

Query: 68  LVEDMASEIHQDVD--------VNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSS 119
           L      + +Q +D        V+LIITDYCMPGMTG++LL+K+KES +L+++PVVIMSS
Sbjct: 70  L-----GDQNQHIDALTCNVMKVSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSS 124

Query: 120 EN 121
           EN
Sbjct: 125 EN 126


>AT2G40670.2 | Symbols: RR16 | response regulator 16 |
           chr2:16970258-16971120 FORWARD LENGTH=165
          Length = 165

 Score = 99.0 bits (245), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 59/123 (47%), Positives = 80/123 (65%), Gaps = 30/123 (24%)

Query: 8   ETQFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLG 67
           + + HVLAVDD+LIDR L+ERLLK S              C +  VT  ++A +AL +LG
Sbjct: 26  DEELHVLAVDDNLIDRKLVERLLKIS--------------CCK--VTTAENALRALEYLG 69

Query: 68  LVEDMASEIHQDVD--------VNLIITDYCMPGMTGYDLLRKIK-ESKSLKDIPVVIMS 118
           L      + +Q +D        V+LIITDYCMPGMTG++LL+K+K ES +L+++PVVIMS
Sbjct: 70  L-----GDQNQHIDALTCNVMKVSLIITDYCMPGMTGFELLKKVKQESSNLREVPVVIMS 124

Query: 119 SEN 121
           SEN
Sbjct: 125 SEN 127


>AT5G07210.1 | Symbols: ARR21, RR21 | response regulator 21 |
           chr5:2252237-2256018 FORWARD LENGTH=621
          Length = 621

 Score = 55.5 bits (132), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 19/111 (17%)

Query: 10  QFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLGLV 69
           + +V+ VDD  +   ++ R+L+ S +    ++        E  V AVD   KAL+ L + 
Sbjct: 15  KINVMVVDDDHVFLDIMSRMLQHSKYRDPSVM--------EIAVIAVDDPKKALSTLKIQ 66

Query: 70  EDMASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSE 120
            D         +++LIITDY MPGM G  L ++I  ++   ++PV++MSS+
Sbjct: 67  RD---------NIDLIITDYYMPGMNGLQLKKQI--TQEFGNLPVLVMSSD 106


>AT2G27070.1 | Symbols: ARR13, RR13 | response regulator 13 |
           chr2:11555781-11560215 REVERSE LENGTH=575
          Length = 575

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 24/111 (21%)

Query: 10  QFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLGLV 69
           + +V+ VDD+ +   +  R+L+ S +              E TV AVD   KAL+ L   
Sbjct: 15  KINVMVVDDNRVFLDIWSRMLEKSKYR-------------EITVIAVDYPKKALSTLK-- 59

Query: 70  EDMASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSE 120
                  +Q  +++LIITDY MPGM G  L ++I  ++   ++ V++MSS+
Sbjct: 60  -------NQRDNIDLIITDYYMPGMNGLQLKKQI--TQEFGNLSVLVMSSD 101