Miyakogusa Predicted Gene

Lj3g3v1855440.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1855440.1 Non Chatacterized Hit- tr|B7FLZ3|B7FLZ3_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,68.42,0.000000000000008,UBA,Ubiquitin-associated/translation
elongation factor EF1B, N-terminal, eukaryote; no
description,N,CUFF.43211.1
         (571 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26920.1 | Symbols:  | Ubiquitin-associated/translation elong...   258   5e-69
AT5G12120.1 | Symbols:  | Ubiquitin-associated/translation elong...    55   1e-07

>AT2G26920.1 | Symbols:  | Ubiquitin-associated/translation
           elongation factor EF1B protein | chr2:11489648-11491588
           FORWARD LENGTH=646
          Length = 646

 Score =  258 bits (660), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 212/621 (34%), Positives = 313/621 (50%), Gaps = 99/621 (15%)

Query: 26  GAFQTTETSLVASTAQVHVKNLHFPNTSDTDEHSNSPQGTASECDSVSNNGSCSGESEDP 85
           G FQ  ++  +AS + +        + +D +           E DSVSNNGSCSGESED 
Sbjct: 50  GTFQALDSVSIASISPLQYSRFRSIDEADVN---------GIESDSVSNNGSCSGESEDH 100

Query: 86  KEKATNSATRLNVMPGCDNDRRDKIRLKNERKHQRQKERRAQELHDRCGEYLMLKKLDAL 145
           KEK TN   +  V+PG DND+R+K+R KNERKHQRQKERRAQEL+++C  YL+ +KL+A 
Sbjct: 101 KEKTTNLPLKQEVIPGADNDKREKVRQKNERKHQRQKERRAQELNEKCSTYLISRKLEAR 160

Query: 146 AEKLVAMGFSSERATLALKLNDGKLEESISWLFEGGEEESQTKKTTNPEGNLKIDIGEEL 205
            +++VAMG S E AT AL +NDGK+EES+ WLF+  EEE + +   +P GNLKIDI EEL
Sbjct: 161 TQQIVAMGISQEHATTALMMNDGKVEESVHWLFDRLEEEIEKQSIQSP-GNLKIDITEEL 219

Query: 206 VQISAMGVKYNCSNQEVERVVVACEGDLQKAENTLKSQKLKS---PVTQSKSQD------ 256
            +I+ M ++  C+ QE+ER VV  EGDL +AE  LK  K +    PV Q +  D      
Sbjct: 220 ARITKMELQLKCTRQEIERAVVQAEGDLDRAEEVLKGTKYEEFSVPVKQEECGDPLTPSN 279

Query: 257 ----------------SAAASVSMQQKGNECDFNYYKV-GGAESTS---PDPGSRNLQSL 296
                           S   S  +    ++ +FNY K     ES +     P  R    L
Sbjct: 280 GKLIVGIGYQNSDVERSEIPSPGLHPTRDDKNFNYTKSPSTTESVNKMLAQPMKRPELKL 339

Query: 297 HLNHPNE---LTEKRWGVTGS--SPSTMLNMAQSMQTLSPSVKVEALPGSLRNEGRMIQG 351
               P +   L +KRW  T      ++    +    +  P+V+VEA   +  NE +  Q 
Sbjct: 340 DWPKPQQSAALADKRWPPTTGQVPSASYSLPSSPSPSPQPAVRVEARYLASGNEFKNFQQ 399

Query: 352 GV-----RREALVMMKHPQ--LTNPQQNSQISINSLPSGTSGWYVNSTPLVENVRSNGKL 404
                  R   +VM + PQ  +TNP     +  +S+ +  + W+  ++  +E ++SNG  
Sbjct: 400 QQQQPANRESVMVMRQRPQVVITNP-----VPTSSMSAPPTSWHPAAS--IEIMKSNG-F 451

Query: 405 LHTH-----------------MEQLCQAPYKGGFYNPMGASSPSPTISSHHQGLWSNNA- 446
           + TH                 + Q  Q   +  F N      P  +++  + G W+ N  
Sbjct: 452 MQTHNIPSARSPSPNHLNPNQVYQQLQYQNQKRFTN-NNQVDPHGSMARGNGGQWTRNTA 510

Query: 447 SSLELTVPSSFGLVSGHQNAARTFSSLSHMDRSTRGMMPEFDYNSVDWSLD--CTSSSKS 504
           SS  ++  SS GL S   +A  + +S S +D  + G +   DY ++DWSLD   + +S+ 
Sbjct: 511 SSPPISAASSLGLFSAVGSAGTSGAS-SPIDWISGGSV---DYTNIDWSLDQSLSQNSRV 566

Query: 505 GGLWPGTSS------------LLSNSYGNRMGSSYITGLQN--VGMARDSSSSDGLREWT 550
            G W G  S             L+ S G R+ +S    ++N   G+  ++  +    +WT
Sbjct: 567 NGNWSGLKSSSQIYDENMNRYSLNGSMGGRLNNSNGVSMENSGAGVIVETQQAATSPDWT 626

Query: 551 SPFAGKDMFSVPRQFVTSPSL 571
           SPF GKD+FS+ RQ+V SPSL
Sbjct: 627 SPFEGKDIFSLSRQYV-SPSL 646


>AT5G12120.1 | Symbols:  | Ubiquitin-associated/translation
           elongation factor EF1B protein | chr5:3916229-3918088
           REVERSE LENGTH=619
          Length = 619

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 30/115 (26%)

Query: 476 MDRSTRGMMPEFDYNSVDWSLD----CTSSSK---------------SGGLWPGTSSLLS 516
           +D +T G +   DYN++DWSLD    C   S+                     G + +++
Sbjct: 516 LDWNTDGSLGHLDYNNIDWSLDKGLACVRPSQQYVAASSPYSAASSPYEAHMNGRTRMMT 575

Query: 517 NSYGNRMGSSYITGLQNVGMARDSSSSDGLREWTSPFAGKDMFSVPRQFVTSPSL 571
           N  GN MG +   G+Q   +  +       REWTSPF GKD+FS+ RQ+V  PSL
Sbjct: 576 N--GNGMGVAM--GVQEAALVGNG------REWTSPFEGKDLFSLSRQYVP-PSL 619