Miyakogusa Predicted Gene
- Lj3g3v1834250.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1834250.1 tr|G7IXZ7|G7IXZ7_MEDTR F-box family-3 OS=Medicago
truncatula GN=MTR_3g048290 PE=4 SV=1,64.29,3e-18,F-box domain,F-box
domain, cyclin-like; F-box,F-box domain, cyclin-like; FAMILY NOT
NAMED,NULL; no d,CUFF.43190.1
(84 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G42730.1 | Symbols: | F-box family protein | chr2:17787454-1... 58 1e-09
AT5G41630.1 | Symbols: | F-box/RNI-like superfamily protein | c... 58 1e-09
AT5G02910.1 | Symbols: | F-box/RNI-like superfamily protein | c... 58 2e-09
AT5G02910.2 | Symbols: | F-box/RNI-like superfamily protein | c... 57 2e-09
AT2G42730.2 | Symbols: | F-box family protein | chr2:17789606-1... 57 2e-09
AT5G41840.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 2e-09
AT3G59190.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 2e-09
AT4G00320.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 3e-09
AT3G58860.1 | Symbols: | F-box/RNI-like superfamily protein | c... 56 6e-09
AT3G59170.1 | Symbols: | F-box/RNI-like superfamily protein | c... 55 7e-09
AT1G49610.1 | Symbols: | F-box family protein | chr1:18361679-1... 55 9e-09
AT3G18150.1 | Symbols: | RNI-like superfamily protein | chr3:62... 55 9e-09
AT1G80960.3 | Symbols: | F-box and Leucine Rich Repeat domains ... 55 1e-08
AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 55 1e-08
AT1G80960.1 | Symbols: | F-box and Leucine Rich Repeat domains ... 55 1e-08
AT1G80960.2 | Symbols: | F-box and Leucine Rich Repeat domains ... 55 1e-08
AT5G22610.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 2e-08
AT3G59200.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-08
AT1G55030.1 | Symbols: | RNI-like superfamily protein | chr1:20... 54 2e-08
AT4G27050.4 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-08
AT4G27050.3 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-08
AT4G27050.2 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-08
AT4G27050.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-08
AT5G03100.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 3e-08
AT3G59160.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 3e-08
AT4G14103.2 | Symbols: | F-box/RNI-like superfamily protein | c... 53 3e-08
AT4G13960.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 3e-08
AT3G03360.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 4e-08
AT4G14096.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 4e-08
AT3G58880.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 4e-08
AT4G14103.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 5e-08
AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 53 5e-08
AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 53 5e-08
AT1G58310.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 5e-08
AT3G28410.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 5e-08
AT4G00315.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 7e-08
AT5G38565.1 | Symbols: | F-box/FBD-like domains containing prot... 52 9e-08
AT2G39415.1 | Symbols: | F-box family protein | chr2:16458607-1... 52 9e-08
AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 9e-08
AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 9e-08
AT3G59210.4 | Symbols: | F-box/RNI-like superfamily protein | c... 52 1e-07
AT3G59210.3 | Symbols: | F-box/RNI-like superfamily protein | c... 52 1e-07
AT3G59210.2 | Symbols: | F-box/RNI-like superfamily protein | c... 52 1e-07
AT3G59210.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 1e-07
AT3G59230.1 | Symbols: | RNI-like superfamily protein | chr3:21... 52 1e-07
AT5G56440.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 51 1e-07
AT1G69630.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 1e-07
AT5G02700.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 2e-07
AT5G44940.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 2e-07
AT3G26922.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 2e-07
AT1G78840.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-07
AT5G54820.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 3e-07
AT5G53840.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-07
AT3G44090.1 | Symbols: | F-box family protein | chr3:15839123-1... 50 4e-07
AT4G09920.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 50 4e-07
AT5G02920.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 4e-07
AT5G02930.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 5e-07
AT1G55660.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 49 5e-07
AT5G35995.2 | Symbols: | F-box/RNI-like superfamily protein | c... 49 5e-07
AT5G35995.1 | Symbols: | F-box/RNI-like superfamily protein | c... 49 5e-07
AT1G55660.2 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 49 6e-07
AT1G56400.1 | Symbols: | F-box family protein | chr1:21111805-2... 49 6e-07
AT1G22000.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 49 7e-07
AT5G38590.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 8e-07
AT3G59240.1 | Symbols: | RNI-like superfamily protein | chr3:21... 49 8e-07
AT1G06630.1 | Symbols: | F-box/RNI-like superfamily protein | c... 49 1e-06
AT5G38590.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 1e-06
AT4G13985.1 | Symbols: FBD1 | FBD-associated F-box protein | chr... 49 1e-06
AT2G26860.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 48 1e-06
AT4G15060.1 | Symbols: | CONTAINS InterPro DOMAIN/s: FBD (Inter... 48 1e-06
AT1G06630.3 | Symbols: | F-box/RNI-like superfamily protein | c... 48 1e-06
AT1G06630.2 | Symbols: | F-box/RNI-like superfamily protein | c... 48 1e-06
AT1G16930.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 1e-06
AT3G59000.2 | Symbols: | F-box/RNI-like superfamily protein | c... 48 1e-06
AT1G66290.1 | Symbols: | F-box/RNI-like superfamily protein | c... 48 1e-06
AT2G26860.2 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 48 1e-06
AT3G42770.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 1e-06
AT1G64540.1 | Symbols: | F-box/FBD-like domains containing prot... 48 1e-06
AT1G48400.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 48 2e-06
AT3G59000.1 | Symbols: | F-box/RNI-like superfamily protein | c... 48 2e-06
AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 47 2e-06
AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 47 2e-06
AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 47 2e-06
AT3G59250.1 | Symbols: | F-box/RNI-like superfamily protein | c... 47 2e-06
AT5G18780.2 | Symbols: | F-box/RNI-like superfamily protein | c... 47 2e-06
AT5G18780.1 | Symbols: | F-box/RNI-like superfamily protein | c... 47 2e-06
AT2G29910.2 | Symbols: | F-box/RNI-like superfamily protein | c... 47 2e-06
AT5G56690.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 47 2e-06
AT2G29910.1 | Symbols: | F-box/RNI-like superfamily protein | c... 47 2e-06
AT1G47915.1 | Symbols: | F-box family protein | chr1:17660752-1... 47 3e-06
AT3G58900.4 | Symbols: | F-box/RNI-like superfamily protein | c... 47 3e-06
AT5G44490.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 47 3e-06
AT1G13570.1 | Symbols: | F-box/RNI-like superfamily protein | c... 47 3e-06
AT1G32020.1 | Symbols: | F-box family protein | chr1:11512552-1... 47 3e-06
AT3G58900.3 | Symbols: | F-box/RNI-like superfamily protein | c... 47 3e-06
AT3G51530.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 47 3e-06
AT5G22670.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 47 3e-06
AT3G58900.2 | Symbols: | F-box/RNI-like superfamily protein | c... 47 3e-06
AT3G58900.1 | Symbols: | F-box/RNI-like superfamily protein | c... 47 3e-06
AT3G44060.1 | Symbols: | F-box/RNI-like superfamily protein | c... 47 4e-06
AT1G56400.2 | Symbols: | F-box family protein | chr1:21111805-2... 47 4e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 47 4e-06
AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 47 4e-06
AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein | c... 46 4e-06
AT3G60710.1 | Symbols: | F-box family protein | chr3:22440198-2... 46 4e-06
AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 46 4e-06
AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 46 4e-06
AT2G26030.3 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 46 5e-06
AT2G26030.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 46 5e-06
AT5G22660.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 46 5e-06
AT5G22660.2 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 46 6e-06
AT3G03040.1 | Symbols: | F-box/RNI-like superfamily protein | c... 46 6e-06
AT5G22730.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 45 7e-06
AT1G50980.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 45 8e-06
AT5G22720.2 | Symbols: | F-box/RNI-like superfamily protein | c... 45 8e-06
AT1G26890.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 45 9e-06
AT5G22720.1 | Symbols: | F-box/RNI-like superfamily protein | c... 45 9e-06
AT5G25860.1 | Symbols: | F-box/RNI-like superfamily protein | c... 45 9e-06
>AT2G42730.1 | Symbols: | F-box family protein |
chr2:17787454-17791218 REVERSE LENGTH=737
Length = 737
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 20 DMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPSMKED 79
+ KD+IS LPD +L ILSL+ TKEA+ TS+L+KRWK ++ +S+ D P K++
Sbjct: 2 NAKDVISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDIDDRQSVPKTKQN 61
Query: 80 R 80
R
Sbjct: 62 R 62
>AT5G41630.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:16650282-16651835 FORWARD LENGTH=455
Length = 455
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 17 NVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPSM 76
+ G +D+IS LPD ++ ILS LPT EA+ T++LAKRWK L +F+ S DF L
Sbjct: 6 DFGGGRDIISDLPDALIGHILSFLPTIEAVATTVLAKRWKPLLSFVHSLDFDDSLCLHPA 65
Query: 77 KEDRKQKS 84
K + ++++
Sbjct: 66 KTNEEKRT 73
>AT5G02910.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:677120-678907 FORWARD LENGTH=458
Length = 458
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 20 DMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWT 60
D D IS LPD ILH ILS +PTK AIRTS+L+KRW+Y+W+
Sbjct: 8 DGMDFISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWS 48
>AT5G02910.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:677120-678588 FORWARD LENGTH=353
Length = 353
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 20 DMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWT 60
D D IS LPD ILH ILS +PTK AIRTS+L+KRW+Y+W+
Sbjct: 8 DGMDFISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWS 48
>AT2G42730.2 | Symbols: | F-box family protein |
chr2:17789606-17791218 REVERSE LENGTH=457
Length = 457
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 20 DMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPSMKED 79
+ KD+IS LPD +L ILSL+ TKEA+ TS+L+KRWK ++ +S+ D P K++
Sbjct: 2 NAKDVISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDIDDRQSVPKTKQN 61
Query: 80 R 80
R
Sbjct: 62 R 62
>AT5G41840.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:16754436-16756263 REVERSE LENGTH=540
Length = 540
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 18 VGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF-RSYLFRPSM 76
VG D IS LPD ++ ILS LPTKEA T++LAKRWK L F+ + +F S F P
Sbjct: 9 VGVSGDRISGLPDALICHILSFLPTKEAASTTVLAKRWKPLLAFVPNLNFDDSIYFHPRA 68
Query: 77 KEDRKQKS 84
+ ++ KS
Sbjct: 69 RRNKYSKS 76
>AT3G59190.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21884740-21886101 FORWARD LENGTH=388
Length = 388
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLF-RPSMKEDR 80
KD+IS LPD +L +LS LPT EA TS+LAKRW++L F+ + D + ++ RP M +
Sbjct: 11 KDIISNLPDALLCHVLSFLPTTEAASTSVLAKRWRFLLAFVPNLDLDNMIYDRPKMGRRK 70
Query: 81 K 81
+
Sbjct: 71 R 71
>AT4G00320.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:139939-141643 FORWARD LENGTH=507
Length = 507
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF-RSYLFRPSMK-ED 79
+D IS LPD ++ ILS LPTK A T++LAKRWK L F+ + DF S+ F P M E+
Sbjct: 12 RDGISGLPDAMICHILSFLPTKVAASTTVLAKRWKPLLAFMPNLDFDESFRFDPRMTCEE 71
Query: 80 RKQKS 84
R++ S
Sbjct: 72 RRKGS 76
>AT3G58860.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21763742-21765306 REVERSE LENGTH=457
Length = 457
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFR-SYLFRPSMKEDRK 81
D+ S LPD ++ ILS LPTKEA TS+LAK+W+YL+ F+ S DF S P +E ++
Sbjct: 7 DLFSKLPDEVISHILSSLPTKEAASTSVLAKKWRYLFAFVPSLDFNDSDFLHP--QEGKR 64
Query: 82 QK 83
+K
Sbjct: 65 EK 66
>AT3G59170.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21878167-21879799 FORWARD LENGTH=473
Length = 473
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLF 72
KDMI++LPD +L ILS L TKEA TS+L++RW+YL F+ + +F ++
Sbjct: 6 KDMINVLPDALLCHILSFLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSVY 56
>AT1G49610.1 | Symbols: | F-box family protein |
chr1:18361679-18363192 REVERSE LENGTH=354
Length = 354
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
D IS LPD IL LSL+PTK AIRTS+L+KRW+++W+ S DF
Sbjct: 26 DSISSLPDVILQENLSLIPTKFAIRTSVLSKRWRHVWSETPSLDF 70
>AT3G18150.1 | Symbols: | RNI-like superfamily protein |
chr3:6217929-6219500 FORWARD LENGTH=456
Length = 456
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 14 QRNNVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSY 70
R + + D IS LPD IL ILS +PTK AI TS+L+KRW+++W S F Y
Sbjct: 22 HRRKIKEAVDSISSLPDVILQHILSFIPTKLAITTSLLSKRWRHVWCDTPSLSFNDY 78
>AT1G80960.3 | Symbols: | F-box and Leucine Rich Repeat domains
containing protein | chr1:30416065-30418220 FORWARD
LENGTH=462
Length = 462
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 6/67 (8%)
Query: 4 LISPPDVHKLQRNNVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLS 63
LI+ D H ++ NV D IS LPD +L +ILS L T+EAIRTS+++KRW+++W +S
Sbjct: 35 LITVSDDHSVKVKNV----DWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMS 90
Query: 64 S--FDFR 68
FD R
Sbjct: 91 HLVFDMR 97
>AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:1447025-1448678
REVERSE LENGTH=448
Length = 448
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPSMKEDR 80
+D IS LPD +L ILS LPT+ AI TS+L+KRW+ LWT L F S F P +D
Sbjct: 12 EDRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSN-FNPVFDDDN 69
>AT1G80960.1 | Symbols: | F-box and Leucine Rich Repeat domains
containing protein | chr1:30416065-30418220 FORWARD
LENGTH=486
Length = 486
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 6/67 (8%)
Query: 4 LISPPDVHKLQRNNVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLS 63
LI+ D H ++ NV D IS LPD +L +ILS L T+EAIRTS+++KRW+++W +S
Sbjct: 35 LITVSDDHSVKVKNV----DWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMS 90
Query: 64 S--FDFR 68
FD R
Sbjct: 91 HLVFDMR 97
>AT1G80960.2 | Symbols: | F-box and Leucine Rich Repeat domains
containing protein | chr1:30416065-30418220 FORWARD
LENGTH=486
Length = 486
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 6/67 (8%)
Query: 4 LISPPDVHKLQRNNVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLS 63
LI+ D H ++ NV D IS LPD +L +ILS L T+EAIRTS+++KRW+++W +S
Sbjct: 35 LITVSDDHSVKVKNV----DWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMS 90
Query: 64 S--FDFR 68
FD R
Sbjct: 91 HLVFDMR 97
>AT5G22610.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7515217-7516916
FORWARD LENGTH=472
Length = 472
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 21 MKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLF 72
++D+IS LP+ +L ILS LPTK+ +RTS+L+KRWK +W + D S F
Sbjct: 16 IEDLISKLPEVLLSQILSYLPTKDIVRTSVLSKRWKSVWLLIPGLDLDSSEF 67
>AT3G59200.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21887484-21889214 FORWARD LENGTH=520
Length = 520
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 36/46 (78%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
+D IS LP+ ++ ILS LPTKEA TS+L+K+W+YL+ ++++ DF
Sbjct: 6 RDRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDF 51
>AT1G55030.1 | Symbols: | RNI-like superfamily protein |
chr1:20530417-20531768 REVERSE LENGTH=422
Length = 422
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 16 NNVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPS 75
NN G + DMIS LP+ ++ IL LPTK AI TS+L+K+W+ W + +F S+L R
Sbjct: 2 NNRGAVTDMISQLPEPLILQILGSLPTKVAITTSVLSKQWQSHWKMMPKLEFDSFLRRLD 61
Query: 76 MKEDRK 81
++ K
Sbjct: 62 LENVTK 67
>AT4G27050.4 | Symbols: | F-box/RNI-like superfamily protein |
chr4:13575884-13577429 REVERSE LENGTH=453
Length = 453
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF-RSYLFRPSMKEDRK 81
D+IS LPD +L ILSL+PTK A TS+L+KRW+ L + S DF + LF P K+
Sbjct: 4 DLISNLPDDVLGKILSLVPTKLAAATSVLSKRWRNLLPLVDSLDFDETMLFYPDNKDGED 63
Query: 82 QKS 84
+ S
Sbjct: 64 EAS 66
>AT4G27050.3 | Symbols: | F-box/RNI-like superfamily protein |
chr4:13575884-13577429 REVERSE LENGTH=453
Length = 453
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF-RSYLFRPSMKEDRK 81
D+IS LPD +L ILSL+PTK A TS+L+KRW+ L + S DF + LF P K+
Sbjct: 4 DLISNLPDDVLGKILSLVPTKLAAATSVLSKRWRNLLPLVDSLDFDETMLFYPDNKDGED 63
Query: 82 QKS 84
+ S
Sbjct: 64 EAS 66
>AT4G27050.2 | Symbols: | F-box/RNI-like superfamily protein |
chr4:13575884-13577429 REVERSE LENGTH=453
Length = 453
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF-RSYLFRPSMKEDRK 81
D+IS LPD +L ILSL+PTK A TS+L+KRW+ L + S DF + LF P K+
Sbjct: 4 DLISNLPDDVLGKILSLVPTKLAAATSVLSKRWRNLLPLVDSLDFDETMLFYPDNKDGED 63
Query: 82 QKS 84
+ S
Sbjct: 64 EAS 66
>AT4G27050.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:13575884-13577429 REVERSE LENGTH=453
Length = 453
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF-RSYLFRPSMKEDRK 81
D+IS LPD +L ILSL+PTK A TS+L+KRW+ L + S DF + LF P K+
Sbjct: 4 DLISNLPDDVLGKILSLVPTKLAAATSVLSKRWRNLLPLVDSLDFDETMLFYPDNKDGED 63
Query: 82 QKS 84
+ S
Sbjct: 64 EAS 66
>AT5G03100.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:726832-727980 FORWARD LENGTH=307
Length = 307
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 19 GDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLW 59
G D IS LPD ILH IL+ PTK AIRTS+L+KRWK++W
Sbjct: 5 GGGVDFISSLPDEILHHILANTPTKLAIRTSVLSKRWKHVW 45
>AT3G59160.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21875023-21876641 FORWARD LENGTH=464
Length = 464
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSS--FDFRSYLFR 73
KDMI+ LPD +L +LS L TKEA TS+L++RW+YL F+ + FD +YL R
Sbjct: 12 KDMINDLPDALLCHVLSYLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSAYLHR 65
>AT4G14103.2 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8126948-8128590 FORWARD LENGTH=443
Length = 443
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLF 72
+D+IS LPD I ILS LPTKEA TS+L+K+W+YL+ F+ + D ++
Sbjct: 7 RDVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVY 57
>AT4G13960.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8060681-8062231 REVERSE LENGTH=434
Length = 434
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFR--PSMKEDR 80
D +S LPD +L+ ILS L TKEA TSIL+KRW+ L+TF+ + D +F KEDR
Sbjct: 2 DHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFVPNLDIDDSVFLHPQEGKEDR 61
Query: 81 KQ 82
+
Sbjct: 62 YE 63
>AT3G03360.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:795218-796918 FORWARD LENGTH=481
Length = 481
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 20 DMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
+ D+IS LPD IL LILS LPT+ AI+TS+L++RW+++W+ S F
Sbjct: 34 EAGDLISRLPDDILQLILSYLPTRLAIKTSVLSRRWRHVWSDTWSLSF 81
>AT4G14096.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8124606-8126202 FORWARD LENGTH=468
Length = 468
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 17 NVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLF 72
++ +D+IS LP+ I ILS LPTKEA TS+L+K+W+YL+ F+ + D ++
Sbjct: 2 DLSGCRDIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVY 57
>AT3G58880.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21768485-21770167 REVERSE LENGTH=454
Length = 454
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 21 MKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLF 72
M D++S LPD +L ILSLL TKEA TSIL+KRW+YL F+ +F F
Sbjct: 1 MVDLVSSLPDDLLGHILSLLTTKEAALTSILSKRWRYLIAFVPYLEFDDSAF 52
>AT4G14103.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8126948-8128305 FORWARD LENGTH=381
Length = 381
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLF 72
+D+IS LPD I ILS LPTKEA TS+L+K+W+YL+ F+ + D ++
Sbjct: 7 RDVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVY 57
>AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPS 75
D IS LPD +L ILS +PTK A+ TSIL+KRW++LW +L+ F S + S
Sbjct: 2 DRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSES 54
>AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPS 75
D IS LPD +L ILS +PTK A+ TSIL+KRW++LW +L+ F S + S
Sbjct: 2 DRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSES 54
>AT1G58310.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:21631947-21633642 FORWARD LENGTH=505
Length = 505
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 17 NVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
+ G +D+IS LPD +L ILS L TKEA TS+LAK+W+YL+ + + DF
Sbjct: 2 DFGRSRDIISGLPDSLLCHILSFLNTKEAASTSVLAKKWRYLFASVPNLDF 52
>AT3G28410.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:10640152-10642071 REVERSE LENGTH=465
Length = 465
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 12 KLQRNNVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFR 68
K+QR + D D I+ +PD ILH ILS +PT A+RTS+L++RW+++W D +
Sbjct: 19 KIQR--IIDGADFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDIK 73
>AT4G00315.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:137404-138888 FORWARD
LENGTH=441
Length = 441
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLS--SFDFRSY 70
D S LPD +L +LS LPTK+A+RTS+L+ RWK LW +L +DFR Y
Sbjct: 2 DKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEYDFRHY 51
>AT5G38565.1 | Symbols: | F-box/FBD-like domains containing
protein | chr5:15444571-15446009 REVERSE LENGTH=349
Length = 349
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRS 69
D+ + LPD +L ILS +PTK A+ TSIL+KRW++LW +L DF S
Sbjct: 2 DIFNGLPDDVLVKILSFVPTKVAVSTSILSKRWEFLWMWLPRLDFGS 48
>AT2G39415.1 | Symbols: | F-box family protein |
chr2:16458607-16458966 REVERSE LENGTH=119
Length = 119
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 12 KLQRNNVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLW--TFLSSFDFRS 69
KL R+ ++ D IS LPD IL ILS LPT AIRTS+L+ RW+++W T FD
Sbjct: 28 KLARDASENI-DSISSLPDVILQQILSSLPTNLAIRTSVLSTRWRHVWSDTPYIYFDGPG 86
Query: 70 YLFRPSMKEDRKQKS 84
L+R +K D K+
Sbjct: 87 TLYR-GLKADTINKT 100
>AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
D IS+LPD L ILSLLPTK+ + TS+L+KRW+YLW + +
Sbjct: 2 DSISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQY 46
>AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
D IS+LPD L ILSLLPTK+ + TS+L+KRW+YLW + +
Sbjct: 2 DSISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQY 46
>AT3G59210.4 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21889942-21891553 FORWARD LENGTH=484
Length = 484
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
KD+I+ LPD +L ILS L TKEA TS+L+KRW+YL+ + + DF
Sbjct: 6 KDIINCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDF 51
>AT3G59210.3 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21889942-21891553 FORWARD LENGTH=484
Length = 484
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
KD+I+ LPD +L ILS L TKEA TS+L+KRW+YL+ + + DF
Sbjct: 6 KDIINCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDF 51
>AT3G59210.2 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21889942-21891553 FORWARD LENGTH=484
Length = 484
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
KD+I+ LPD +L ILS L TKEA TS+L+KRW+YL+ + + DF
Sbjct: 6 KDIINCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDF 51
>AT3G59210.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21889942-21891553 FORWARD LENGTH=484
Length = 484
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
KD+I+ LPD +L ILS L TKEA TS+L+KRW+YL+ + + DF
Sbjct: 6 KDIINCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDF 51
>AT3G59230.1 | Symbols: | RNI-like superfamily protein |
chr3:21896052-21897787 REVERSE LENGTH=491
Length = 491
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 17 NVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
N+G KD+I+ LP+ +++ ILS L TKEA TS+L+++W+Y + F+ + DF
Sbjct: 7 NIGP-KDIINSLPEALIYHILSFLSTKEAAITSLLSRKWRYFFAFVPNLDF 56
>AT5G56440.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22855742-22857117
REVERSE LENGTH=430
Length = 430
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFR 68
D IS+LPD ++ ILS +PTK + T++L+KRW+YLW + D+R
Sbjct: 2 DRISLLPDDVVFKILSFVPTKVVVSTNLLSKRWRYLWKHVPKLDYR 47
>AT1G69630.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:26191640-26193174 REVERSE LENGTH=451
Length = 451
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 9 DVHKLQRNNVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFR 68
D K R D D IS LPDC+L +L LPTK+ ++TS+L++RW+ LW + D
Sbjct: 4 DREKHVRAKGSDEVDWISKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLWKHVPGLDLD 63
Query: 69 SYLFR 73
+ F+
Sbjct: 64 NTDFQ 68
>AT5G02700.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:609381-611679 REVERSE LENGTH=456
Length = 456
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
Query: 12 KLQRNNVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLW 59
++QR + D D I+ +PD ILH ILS +PT A+RTS+L++RW+++W
Sbjct: 18 RIQR--IIDGADFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVW 63
>AT5G44940.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:18149369-18150892 FORWARD LENGTH=377
Length = 377
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLF 72
D IS PDC+L IL LPTK++++TS+L+KRW+ LW + R++ F
Sbjct: 5 DYISEFPDCLLTQILLNLPTKDSVKTSVLSKRWRNLWLNVPGLRLRTFDF 54
>AT3G26922.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:9922858-9923891 FORWARD LENGTH=306
Length = 306
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 15 RNNVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
RN G +D IS LP+ +L ILS+LP K+ + TS+L+K W+ LW + + F
Sbjct: 6 RNGNGVNEDRISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTLKF 58
>AT1G78840.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:29639290-29640817
REVERSE LENGTH=439
Length = 439
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 22 KDMIS-ILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFR 73
KD+IS +LPD +LH IL L TK++++TSIL+ RW+Y+W + D FR
Sbjct: 4 KDLISQLLPDHVLHEILLKLATKDSVKTSILSTRWRYIWQRVPGLDLNQTNFR 56
>AT5G54820.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:22269859-22271777 FORWARD LENGTH=472
Length = 472
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFR 68
+D +S LPD +L +I+S LP KE +RTS+L+KRW+YL ++ F+
Sbjct: 6 QDRLSSLPDILLIMIISFLPLKECVRTSVLSKRWRYLCLETTNLSFK 52
>AT5G53840.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:21859148-21860672
REVERSE LENGTH=444
Length = 444
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 19 GDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFR 73
G ++ +S LPD ++ +ILS L TK+A+RTSIL+ RW+ LW + DF S R
Sbjct: 14 GSEEERLSQLPDHLICVILSHLSTKDAVRTSILSTRWRNLWQLVPVLDFDSRELR 68
>AT3G44090.1 | Symbols: | F-box family protein |
chr3:15839123-15840759 FORWARD LENGTH=449
Length = 449
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 28 LPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLF 72
LPD +L IL LPTKEAI TS+L+KRW+ L++ + + D Y+F
Sbjct: 29 LPDDLLVQILYFLPTKEAISTSLLSKRWRTLYSLVHNLDLDDYIF 73
>AT4G09920.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr4:6224691-6225905
FORWARD LENGTH=316
Length = 316
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRS 69
D I LPD +L ILS +PTK A+ TSIL+KRW++LW +L+ F S
Sbjct: 2 DRIIGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGS 48
>AT5G02920.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:680541-681317 FORWARD LENGTH=258
Length = 258
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 11 HKLQRNNVGDMKDMISILPDCILHLILSLLP-TKEAIRTSILAKRWKYLWT 60
H+ R + D IS LPD ILH ILS +P T IRTS+L+KRW+++W+
Sbjct: 16 HRFDRPLIRRSSDSISNLPDEILHHILSFIPETNLVIRTSVLSKRWRHVWS 66
>AT5G02930.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:682577-684480 FORWARD LENGTH=469
Length = 469
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 8 PDVHKLQRNNVGDMK-DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWT 60
P + K +N D+ D IS LPD +L I S +PT+ AIRTS+L+KRW+++W+
Sbjct: 12 PVMFKRSKNVSVDVGVDSISDLPDAVLQHIFSYIPTELAIRTSVLSKRWRHVWS 65
>AT1G55660.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:20800694-20802340
FORWARD LENGTH=492
Length = 492
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 18 VGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLS--SFDFRSY 70
V ++ D IS LPD +L +LS L TK+A+ TSIL+ RWK LW +L ++FR Y
Sbjct: 48 VKNLMDKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNFRHY 102
>AT5G35995.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:14136707-14138230 REVERSE LENGTH=455
Length = 455
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 22 KDMISILPDCIL-HLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFR 68
+D IS LPD +L ILSLLPTK + TS+L+KRW+ L+ F+ SFD
Sbjct: 4 RDFISSLPDEVLGKKILSLLPTKLVVSTSVLSKRWRNLFHFVDSFDLE 51
>AT5G35995.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:14136707-14138230 REVERSE LENGTH=455
Length = 455
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 22 KDMISILPDCIL-HLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFR 68
+D IS LPD +L ILSLLPTK + TS+L+KRW+ L+ F+ SFD
Sbjct: 4 RDFISSLPDEVLGKKILSLLPTKLVVSTSVLSKRWRNLFHFVDSFDLE 51
>AT1G55660.2 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:20800694-20801788
FORWARD LENGTH=364
Length = 364
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 18 VGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLS--SFDFRSY 70
V ++ D IS LPD +L +LS L TK+A+ TSIL+ RWK LW +L ++FR Y
Sbjct: 48 VKNLMDKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNFRHY 102
>AT1G56400.1 | Symbols: | F-box family protein |
chr1:21111805-21113621 REVERSE LENGTH=479
Length = 479
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPSMKEDRK 81
+D +S LPD +L +I+S L KE IRTS+LAKRW+YL + F+ + D++
Sbjct: 12 QDRLSNLPDVLLIMIISCLSFKECIRTSVLAKRWRYLCRETRNISFKETEYVDHFVSDKR 71
Query: 82 QK 83
K
Sbjct: 72 SK 73
>AT1G22000.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:7744189-7747123
FORWARD LENGTH=717
Length = 717
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 25 ISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFR 68
I LPD +L IL +PTKEA+ TSIL+K+W+Y+W L +F+
Sbjct: 31 ICALPDDLLLQILPHVPTKEAVATSILSKQWRYVWLMLPKLEFK 74
>AT5G38590.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:15452066-15453455
REVERSE LENGTH=410
Length = 410
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFR 73
D I+ LPD +L ILS +PT A+ TSIL+KRW++LW +L + D+ S R
Sbjct: 2 DKINGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDYTSRWCR 52
>AT3G59240.1 | Symbols: | RNI-like superfamily protein |
chr3:21898682-21900364 REVERSE LENGTH=504
Length = 504
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 34/46 (73%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
KD+IS LP+ ++ +LS +PTKEA TS+L+++W+YL+ F DF
Sbjct: 7 KDIISDLPEALICHLLSFVPTKEAALTSLLSEKWRYLFAFAPILDF 52
>AT1G06630.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:2028071-2031173 FORWARD LENGTH=477
Length = 477
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 11/68 (16%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF-----------RSY 70
+D I+ LPD IL ILSLL TK+A+ TS+L+K+W+ L+ + + +F SY
Sbjct: 11 RDAINWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVSGMGEQEASY 70
Query: 71 LFRPSMKE 78
+F S K+
Sbjct: 71 VFPESFKD 78
>AT5G38590.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:15452586-15453455
REVERSE LENGTH=289
Length = 289
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFR 73
D I+ LPD +L ILS +PT A+ TSIL+KRW++LW +L + D+ S R
Sbjct: 2 DKINGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDYTSRWCR 52
>AT4G13985.1 | Symbols: FBD1 | FBD-associated F-box protein |
chr4:8080118-8081669 REVERSE LENGTH=459
Length = 459
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 19 GDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFR 68
GD D + LPDC+L IL LPTK+ ++ S+L++RW+ +W ++ D
Sbjct: 15 GDRVDRLRNLPDCLLFKILLNLPTKDVVKLSVLSRRWRNVWRYVPGLDLE 64
>AT2G26860.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:11452196-11453584
REVERSE LENGTH=405
Length = 405
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
D IS LPD +L IL LPTKE + TSIL+KRW++LW ++ F
Sbjct: 2 DRISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTF 46
>AT4G15060.1 | Symbols: | CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), F-box domain, Skp2-like
(InterPro:IPR022364), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: FBD, F-box and
Leucine Rich Repeat domains containing protein
(TAIR:AT1G55660.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr4:8599035-8601761 FORWARD LENGTH=539
Length = 539
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPSMKE 78
D IS LPD +L +L LPTK A+ TSIL+KRW++LW +L ++ + + S ++
Sbjct: 172 DKISRLPDDLLVKVLLFLPTKIAVSTSILSKRWEFLWMWLPKLEYHNTNYSASEEQ 227
>AT1G06630.3 | Symbols: | F-box/RNI-like superfamily protein |
chr1:2028071-2030344 FORWARD LENGTH=461
Length = 461
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 11/68 (16%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF-----------RSY 70
+D I+ LPD IL ILSLL TK+A+ TS+L+K+W+ L+ + + +F SY
Sbjct: 11 RDAINWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVSGMGEQEASY 70
Query: 71 LFRPSMKE 78
+F S K+
Sbjct: 71 VFPESFKD 78
>AT1G06630.2 | Symbols: | F-box/RNI-like superfamily protein |
chr1:2028071-2029442 FORWARD LENGTH=403
Length = 403
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 11/68 (16%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF-----------RSY 70
+D I+ LPD IL ILSLL TK+A+ TS+L+K+W+ L+ + + +F SY
Sbjct: 11 RDAINWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVSGMGEQEASY 70
Query: 71 LFRPSMKE 78
+F S K+
Sbjct: 71 VFPESFKD 78
>AT1G16930.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:5789987-5791534
FORWARD LENGTH=449
Length = 449
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 10 VHKLQRNNVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRS 69
V + QRN+ D IS LPD +L ILS L TKE++ TS+L+KRW+ LW + D S
Sbjct: 7 VKEKQRNS-----DRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDS 61
Query: 70 YLF 72
F
Sbjct: 62 NNF 64
>AT3G59000.2 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21799757-21801536 FORWARD LENGTH=345
Length = 345
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLF 72
D + LPD +L ILS L TKEA TS+L+KRW+YL F+ + F +F
Sbjct: 2 DRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVF 51
>AT1G66290.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:24713306-24714843 REVERSE LENGTH=453
Length = 453
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 16 NNVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFD 66
N GD D IS LP+ ++ L+L LPTK+ I+TS+L+ +W+ +W ++ D
Sbjct: 22 NGSGDEVDWISDLPEALIVLVLLNLPTKDVIKTSVLSTKWRNIWRYVPRLD 72
>AT2G26860.2 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:11452421-11453584
REVERSE LENGTH=355
Length = 355
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
D IS LPD +L IL LPTKE + TSIL+KRW++LW ++ F
Sbjct: 2 DRISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTF 46
>AT3G42770.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:14867122-14870083
FORWARD LENGTH=532
Length = 532
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 25 ISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPSMK 77
++ LPD +L ILS LPTKEA TS+L+KRW+ L+T + DF + L S K
Sbjct: 1 MNCLPDELLVQILSFLPTKEATSTSLLSKRWRTLFTLSPNLDFDNSLLLQSKK 53
>AT1G64540.1 | Symbols: | F-box/FBD-like domains containing
protein | chr1:23966909-23968425 FORWARD LENGTH=444
Length = 444
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFR 68
++ IS LPD IL ILSLLPTK + TS+L+KRW+ L + +FD
Sbjct: 4 REFISNLPDEILGKILSLLPTKLGVSTSVLSKRWRNLILLVDNFDLE 50
>AT1G48400.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:17882136-17883855
REVERSE LENGTH=513
Length = 513
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF-RSYLFRPSMKED 79
+D IS LPD IL ILSLLPTK A TS+L+KRW+ L + + F S + P+ +E+
Sbjct: 9 RDSISNLPDEILGKILSLLPTKVAASTSVLSKRWRNLLGLVDNLCFDESMVVYPNEEEE 67
>AT3G59000.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21799757-21801536 FORWARD LENGTH=491
Length = 491
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLF 72
D + LPD +L ILS L TKEA TS+L+KRW+YL F+ + F +F
Sbjct: 2 DRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVF 51
>AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:63465-65365 FORWARD
LENGTH=453
Length = 453
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRS 69
KD IS LPD +L ILS LPTK + TS+ +K+W+ LW + + +F S
Sbjct: 15 KDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDS 62
>AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
+D +S LPD L ILS LPTK+ + TS+L+KRW++LWT + ++
Sbjct: 5 RDRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNY 50
>AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
+D +S LPD L ILS LPTK+ + TS+L+KRW++LWT + ++
Sbjct: 5 RDRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNY 50
>AT3G59250.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21901726-21903284 REVERSE LENGTH=425
Length = 425
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF-RSYLFRP 74
KD IS LP+ ++ ILS LP +++ TS+L+KRW+YL+ F + F S RP
Sbjct: 6 KDKISNLPEALICHILSFLPIEDSALTSVLSKRWRYLFAFRPNLVFDDSVCLRP 59
>AT5G18780.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:6264610-6266097 FORWARD LENGTH=441
Length = 441
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 19 GDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
G +D ISILP+ +L ILS L TK+++RTS+L+ RW+ LW ++ D
Sbjct: 7 GSGEDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDL 55
>AT5G18780.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:6264610-6266097 FORWARD LENGTH=441
Length = 441
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 19 GDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
G +D ISILP+ +L ILS L TK+++RTS+L+ RW+ LW ++ D
Sbjct: 7 GSGEDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDL 55
>AT2G29910.2 | Symbols: | F-box/RNI-like superfamily protein |
chr2:12751823-12752830 REVERSE LENGTH=335
Length = 335
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPS 75
+D+IS LPD IL +LSLLPTK A T++L+KRW L + D + P
Sbjct: 4 RDLISSLPDEILGKVLSLLPTKRAASTAVLSKRWNNLPALVDKLDINDAIGGPG 57
>AT5G56690.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr5:22939723-22941099
FORWARD LENGTH=402
Length = 402
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 25 ISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSY 70
IS LPD +L IL+ LPTK AI TS+L+K+W++LW +L + Y
Sbjct: 4 ISGLPDDLLVKILAFLPTKVAISTSVLSKQWRFLWMWLPKLKYDDY 49
>AT2G29910.1 | Symbols: | F-box/RNI-like superfamily protein |
chr2:12751686-12752830 REVERSE LENGTH=352
Length = 352
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPS 75
+D+IS LPD IL +LSLLPTK A T++L+KRW L + D + P
Sbjct: 4 RDLISSLPDEILGKVLSLLPTKRAASTAVLSKRWNNLPALVDKLDINDAIGGPG 57
>AT1G47915.1 | Symbols: | F-box family protein |
chr1:17660752-17660973 FORWARD LENGTH=73
Length = 73
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF-RSYLFRPSMKEDR 80
+D IS LPD IL ILSLLPTK A TS+L+KRW+ L + + F S + P+ +E
Sbjct: 7 RDSISNLPDEILGKILSLLPTKVAASTSVLSKRWRNLLGLVDNLCFDESVVVYPNKEEAF 66
Query: 81 K 81
K
Sbjct: 67 K 67
>AT3G58900.4 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774620 FORWARD LENGTH=465
Length = 465
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPSMKEDRKQ 82
D+ S LP+ +L+ ILS L TKEA TS+L+KRW+ L+ F+ +F +F + R++
Sbjct: 2 DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61
Query: 83 KS 84
+
Sbjct: 62 EG 63
>AT5G44490.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr5:17924035-17925843 FORWARD LENGTH=455
Length = 455
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLF 72
+D++S L D ++ +L LPTKEA+ TS+L+ RWK +W + D S F
Sbjct: 16 EDLMSKLTDALISQVLFYLPTKEAVSTSVLSSRWKSVWLLIPDLDLNSSAF 66
>AT1G13570.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:4642528-4643930 REVERSE LENGTH=416
Length = 416
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 18 VGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPS 75
+G+ D IS LP I+ IL+ L ++AIRTS+L+ +W+Y W+ L+ F PS
Sbjct: 1 MGESPDFISDLPQSIIENILTRLSIRDAIRTSVLSSKWRYKWSTLTDLVFDEKCVSPS 58
>AT1G32020.1 | Symbols: | F-box family protein |
chr1:11512552-11513067 REVERSE LENGTH=171
Length = 171
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPS 75
D IS LPD ++ I+S L K++I+TS+L+KRW+++W + D ++ F P+
Sbjct: 4 DRISTLPDHLVAKIVSYLGIKDSIKTSVLSKRWEFVWLKVVGLDLKNCDFPPN 56
>AT3G58900.3 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774074 FORWARD LENGTH=314
Length = 314
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPSMKEDRKQ 82
D+ S LP+ +L+ ILS L TKEA TS+L+KRW+ L+ F+ +F +F + R++
Sbjct: 2 DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61
Query: 83 KS 84
+
Sbjct: 62 EG 63
>AT3G51530.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19112873-19114497
REVERSE LENGTH=455
Length = 455
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRS 69
+D IS LP+ +L ILS LPTK I TS+L+KRW LW + +F S
Sbjct: 29 EDRISELPEVLLLQILSSLPTKLVISTSVLSKRWLSLWKMVQRLEFES 76
>AT5G22670.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7538192-7539685
REVERSE LENGTH=443
Length = 443
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWK 56
+D IS+LPD +L ILS LPTK A+RTS+L+KRWK
Sbjct: 10 QDSISLLPDDLLCRILSNLPTKVAVRTSVLSKRWK 44
>AT3G58900.2 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774013 FORWARD LENGTH=327
Length = 327
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPSMKEDRKQ 82
D+ S LP+ +L+ ILS L TKEA TS+L+KRW+ L+ F+ +F +F + R++
Sbjct: 2 DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61
Query: 83 KS 84
+
Sbjct: 62 EG 63
>AT3G58900.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774013 FORWARD LENGTH=327
Length = 327
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFRPSMKEDRKQ 82
D+ S LP+ +L+ ILS L TKEA TS+L+KRW+ L+ F+ +F +F + R++
Sbjct: 2 DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61
Query: 83 KS 84
+
Sbjct: 62 EG 63
>AT3G44060.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:15824938-15826391 REVERSE LENGTH=427
Length = 427
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 28 LPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFR 68
LPD +L IL LLPTKEA+ TS+L+KRW+ L+T + DF
Sbjct: 4 LPDDLLVQILYLLPTKEAVSTSVLSKRWRTLFTRSDNLDFH 44
>AT1G56400.2 | Symbols: | F-box family protein |
chr1:21111805-21113621 REVERSE LENGTH=438
Length = 438
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFD 66
+D +S LPD +L +I+S L KE IRTS+LAKRW+Y ++ + +
Sbjct: 12 QDRLSNLPDVLLIMIISCLSFKECIRTSVLAKRWRYHGRYIETLE 56
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
+D IS LPD +L ILSL+PTK+A+ TS+LAK+W+ ++ + +
Sbjct: 231 RDAISWLPDEVLGKILSLIPTKQAVSTSLLAKKWRTIFRLVDHLEL 276
>AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22976334-22977838
FORWARD LENGTH=435
Length = 435
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDF 67
D IS LPD +L ILS + T +AI TS+L+KRWK++W + + D
Sbjct: 15 DRISYLPDDLLLRILSFIHTSDAISTSLLSKRWKFVWKMMPTLDL 59
>AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:15449279-15450601 REVERSE LENGTH=379
Length = 379
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRS 69
D I+ LPD +L ILS +PT A+ T +L+KRW++LW +L + +F S
Sbjct: 2 DNINGLPDDLLVKILSFVPTYVAVSTCVLSKRWEFLWMWLPNLEFVS 48
>AT3G60710.1 | Symbols: | F-box family protein |
chr3:22440198-22441472 FORWARD LENGTH=320
Length = 320
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 21 MKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLW 59
M+D+IS LP+ +L IL LPT E++RTS+L RW+ LW
Sbjct: 1 MEDLISQLPNELLQEILLNLPTSESVRTSVLPTRWRNLW 39
>AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRS 69
KD IS LPD +L ILS LPT + TS+L+K+W+ LW + + +F S
Sbjct: 20 KDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDS 67
>AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRS 69
KD IS LPD +L ILS LPT + TS+L+K+W+ LW + + +F S
Sbjct: 20 KDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDS 67
>AT2G26030.3 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr2:11091505-11093000
REVERSE LENGTH=442
Length = 442
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFR 68
D I LPD +L +LS LPT ++++TS+L+KRW++LW + D +
Sbjct: 4 DRICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLK 49
>AT2G26030.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr2:11091505-11093000
REVERSE LENGTH=442
Length = 442
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFR 68
D I LPD +L +LS LPT ++++TS+L+KRW++LW + D +
Sbjct: 4 DRICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLK 49
>AT5G22660.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr5:7536906-7537853 REVERSE LENGTH=315
Length = 315
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 28/38 (73%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLW 59
+D IS LPD +L ILS LPT+ A+ TSIL+ RWK LW
Sbjct: 12 EDRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLW 49
>AT5G22660.2 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr5:7536328-7537853 REVERSE LENGTH=450
Length = 450
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 28/38 (73%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLW 59
+D IS LPD +L ILS LPT+ A+ TSIL+ RWK LW
Sbjct: 12 EDRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLW 49
>AT3G03040.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:684685-686277 FORWARD LENGTH=472
Length = 472
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 23 DMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLF 72
D++S LPD + LILS L TKE+ TS+L+K+W+ L+ + + DF F
Sbjct: 2 DLLSSLPDEVRCLILSFLTTKESASTSVLSKKWRNLFALVPNLDFDDSEF 51
>AT5G22730.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7551632-7553219
REVERSE LENGTH=466
Length = 466
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRSYLFR 73
+D+IS LPD ++ IL LP K+ +RTS L+ RWK LW + D S F+
Sbjct: 27 EDLISKLPDSLITQILLYLPIKDIVRTSSLSSRWKSLWLLIPRLDLDSEEFQ 78
>AT1G50980.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:18900541-18902057
REVERSE LENGTH=370
Length = 370
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 11 HKLQRNNVGDMKDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSF 65
+K+ + N+ IS PD +L ILSLLP+K+ + T +L+KRW+ LW + +F
Sbjct: 20 NKIYQENMEKKIRTISEFPDKVLLKILSLLPSKDVVATGVLSKRWRSLWKDVKTF 74
>AT5G22720.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:7547797-7551174 REVERSE LENGTH=675
Length = 675
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLW-----TFLSSFDFRSY 70
+D+IS LPD ++ IL L TK+A+ TS+L+KRW+ LW L S DF Y
Sbjct: 22 EDLISQLPDSLITQILFYLQTKKAVTTSVLSKRWRSLWLSTPGLVLISNDFTDY 75
>AT1G26890.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:9317589-9319078
FORWARD LENGTH=419
Length = 419
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 25 ISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSSFDFRS 69
I P+ +L IL +PTKEA+ TSIL+KRW+Y+W + +F+
Sbjct: 40 ICAFPNDLLLQILHHVPTKEAVATSILSKRWRYVWPMVPRLEFKE 84
>AT5G22720.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:7547797-7551174 REVERSE LENGTH=642
Length = 642
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLW-----TFLSSFDFRSY 70
+D+IS LPD ++ IL L TK+A+ TS+L+KRW+ LW L S DF Y
Sbjct: 22 EDLISQLPDSLITQILFYLQTKKAVTTSVLSKRWRSLWLSTPGLVLISNDFTDY 75
>AT5G25860.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:9016908-9018424 REVERSE LENGTH=448
Length = 448
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 22 KDMISILPDCILHLILSLLPTKEAIRTSILAKRWKYLWTFLSS-FDFRSYLF 72
+D ++ LPD IL ILS LPTK A+ TS+++KRW+ L+ + F+ + +L+
Sbjct: 11 RDAVNCLPDEILAKILSYLPTKRAVSTSLISKRWRNLFALMIQLFESQHHLY 62