Miyakogusa Predicted Gene

Lj3g3v1800470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1800470.1 Non Chatacterized Hit- tr|I3SCQ2|I3SCQ2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,89.76,0,HAD-like,HAD-like domain; no description,Phosphoserine
phosphatase, domain 2; seg,NULL; PHOSPHOSERIN,CUFF.43222.1
         (161 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18640.2 | Symbols: PSP | 3-phosphoserine phosphatase | chr1:...   173   4e-44

>AT1G18640.2 | Symbols: PSP | 3-phosphoserine phosphatase |
           chr1:6416524-6418245 REVERSE LENGTH=295
          Length = 295

 Score =  173 bits (439), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 96/169 (56%), Positives = 116/169 (68%), Gaps = 9/169 (5%)

Query: 1   MEGLVSSGINPVPIFGVRNQRSCLFSASTLHLRKGQ-RGIRIGMXXXXXXXXXXXXXXXH 59
           ME L +S + PV +   R   S   + S L LR+   RG+   M               H
Sbjct: 1   MEALTTSRVVPVQV-PCRKLSSLFANFSCLELRRYPCRGLVSIMNHPKLLRPVTASVQPH 59

Query: 60  FENTLA-------SKETLEIWRNSDAVCFDVDSTVCLDEGIDELAEFCGAGKAVAEWTAR 112
             +TL        SKE L++WR+ +AVCFDVDSTVC+DEGIDELAEFCGAGKAVAEWTAR
Sbjct: 60  ELSTLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTAR 119

Query: 113 AMGGSVPFEEALAARLSLFKPSLSQLQNFLHQNPPRLSPGVEELVQKLK 161
           AMGGSVPFEEALAARLSLFKPSLS+++ +L + PPRLSPG+EELV+KL+
Sbjct: 120 AMGGSVPFEEALAARLSLFKPSLSKVEEYLDKRPPRLSPGIEELVKKLR 168