Miyakogusa Predicted Gene

Lj3g3v1739290.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1739290.2 tr|A8HT66|A8HT66_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_187979 PE=4
SV=1,26.58,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL;
ARSENITE-RESISTANCE PROTEIN 2,NULL; DUF3546,Protein of unknown
f,CUFF.43058.2
         (353 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G27100.1 | Symbols: SE | C2H2 zinc-finger protein SERRATE (SE...   466   e-131

>AT2G27100.1 | Symbols: SE | C2H2 zinc-finger protein SERRATE (SE) |
           chr2:11572587-11576357 FORWARD LENGTH=720
          Length = 720

 Score =  466 bits (1199), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 230/354 (64%), Positives = 270/354 (76%), Gaps = 7/354 (1%)

Query: 1   MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRTYFNSHKDEEWLKDKYHPTNLLTV 60
           MSYKQFIQELEDDILP+EAERRYQEYKSEYI+TQKR +FN+HK+E+WLK+KYHPTNLL+V
Sbjct: 196 MSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAFFNTHKEEDWLKNKYHPTNLLSV 255

Query: 61  IERRNENARQLAKDFLLDLQSGTLDLNPGLXXXXXXXXXXXXEPNSDEEADNAGKRKRHG 120
           IERRN+ A+++AKDFLLDLQSGTLDL P +            EPNS++EA   GKRKRHG
Sbjct: 256 IERRNDLAQKVAKDFLLDLQSGTLDLGPAV--TALNKSGRTSEPNSEDEAAGVGKRKRHG 313

Query: 121 RGSNKEND-FSAAPKAHSISLEPRRIQADIQQAQTLVRKLDIEKGIADNILCNSDLNKND 179
            G  KEN+  SAAPKA S + +P+RI  D++Q Q LVRKLD EK I +N+L  S+  K+ 
Sbjct: 314 MGGAKENELLSAAPKAPSFTSDPKRILTDVEQTQALVRKLDSEKKIEENVLQGSETEKSG 373

Query: 180 -DKTHRGSVGPIIILRGLSSVKGLEGVELLDTLITYLWRIHGVDYYGLIETIEAKGFRHV 238
            +K H GS GP++I+RGL+SVKGLEGVELLDTL+TYLWR+HG+DYYG +ET EAKG RHV
Sbjct: 374 REKLHSGSTGPVVIIRGLTSVKGLEGVELLDTLVTYLWRVHGLDYYGKVETNEAKGLRHV 433

Query: 239 RPEGTTHXXXXXXXXXXXXXLDSFWQGRLNGQDPVEVMTXXXXXXXXXXXXLDPYIRKIR 298
           R EG                 DS WQ RL GQDP+EVM             LDP++RKIR
Sbjct: 434 RAEGKV---SDAKGDENESKFDSHWQERLKGQDPLEVMAAKEKIDAAATEALDPHVRKIR 490

Query: 299 DEKYGWKYGCGAKGCTKLFHASEFVHKHLKLKHPELAVEQTTKVREDLYFQNYM 352
           DEKYGWKYGCGAKGCTKLFHA+EFV+KHLKLKH EL  E TTKVRE+LYFQNYM
Sbjct: 491 DEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHTELVTELTTKVREELYFQNYM 544