Miyakogusa Predicted Gene

Lj3g3v1706730.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1706730.1 Non Chatacterized Hit- tr|I1M513|I1M513_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28832
PE,89.92,0,seg,NULL; Bac_surface_Ag,Bacterial surface antigen (D15);
SUBFAMILY NOT NAMED,NULL; SORTING AND ASSE,CUFF.43007.1
         (377 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G19620.1 | Symbols: EMB213, OEP80, ATOEP80, TOC75 | outer env...   555   e-158
AT3G44160.1 | Symbols:  | Outer membrane OMP85 family protein | ...   202   4e-52
AT3G48620.1 | Symbols:  | Outer membrane OMP85 family protein | ...   127   2e-29
AT3G46740.1 | Symbols: TOC75-III, MAR1 | translocon at the outer...    58   9e-09
AT4G09080.1 | Symbols: TOC75-IV, ATTOC75-IV | Outer membrane OMP...    50   4e-06

>AT5G19620.1 | Symbols: EMB213, OEP80, ATOEP80, TOC75 | outer
           envelope protein of 80 kDa | chr5:6623323-6627641
           FORWARD LENGTH=732
          Length = 732

 Score =  555 bits (1429), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 270/378 (71%), Positives = 303/378 (80%), Gaps = 1/378 (0%)

Query: 1   MLQGKRDVETVLTMGIMEDVSIIPQPA-DAGKVDLVMNVVERPXXXXXXXXXXXXXXXXX 59
           MLQGKRDV+TVL MGIMEDVSIIPQPA D+GKVDL+MN VERP                 
Sbjct: 355 MLQGKRDVDTVLAMGIMEDVSIIPQPAGDSGKVDLIMNCVERPSGGFSAGGGISSGITSG 414

Query: 60  PLRGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIQGDDKRTSRTIMIQN 119
           PL GLIGSFAYSHRN+FGRNQKLN+SLERGQIDSIFRINYTDPWI+GDDKRTSR+IM+QN
Sbjct: 415 PLSGLIGSFAYSHRNLFGRNQKLNVSLERGQIDSIFRINYTDPWIEGDDKRTSRSIMVQN 474

Query: 120 SRTPGTIVHGNVDGNSSLTIGRITGGMEFSRPIRPKWSGTAGLIFQRAGVRDDKGDPIIK 179
           SRTPG +VHGN   NSSLTIGR+T G+E+SRP RPKW+GTAGLIFQ AG RD++G+PIIK
Sbjct: 475 SRTPGNLVHGNQPDNSSLTIGRVTAGVEYSRPFRPKWNGTAGLIFQHAGARDEQGNPIIK 534

Query: 180 DCYSSPLTASGNTHDDTLLAKIETVYTGSGDHGSSMFVLNVEQGLPLLSEWLSFTRVNTR 239
           D YSSPLTASG  HD+T+LAK+E++YTGSGD GS+MF  N+EQGLP+L EWL F RV  R
Sbjct: 535 DFYSSPLTASGKPHDETMLAKLESIYTGSGDQGSTMFAFNMEQGLPVLPEWLCFNRVTGR 594

Query: 240 ARKGVEIGPARILLSLSGGHVKGNFSPYEAFAIGGTNXXXXXXXXXXXXXXXXXXXXXEI 299
           ARKG+ IGPAR L SLSGGHV G FSP+EAF IGGTN                     E+
Sbjct: 595 ARKGIHIGPARFLFSLSGGHVVGKFSPHEAFVIGGTNSVRGYEEGAVGSGRSYVVGSGEL 654

Query: 300 SFPMFGPVEGVVFSDYGTDLGSGPTVPGDPAGARGKPGSGHGYGFGIRVDSPLGPLRLEY 359
           SFP+ GPVEGV+F+DYGTD+GSG TVPGDPAGAR KPGSG+GYG G+RVDSPLGPLRLEY
Sbjct: 655 SFPVRGPVEGVIFTDYGTDMGSGSTVPGDPAGARLKPGSGYGYGLGVRVDSPLGPLRLEY 714

Query: 360 AFNDQKDKRFHFGVGHRN 377
           AFNDQ   RFHFGVG RN
Sbjct: 715 AFNDQHAGRFHFGVGLRN 732


>AT3G44160.1 | Symbols:  | Outer membrane OMP85 family protein |
           chr3:15889225-15891814 REVERSE LENGTH=362
          Length = 362

 Score =  202 bits (513), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 120/320 (37%), Positives = 178/320 (55%), Gaps = 9/320 (2%)

Query: 60  PLRGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIQGDDKRTSRTIMIQN 119
           PL  +IGS    H N+FG ++KL++S ++G  DS   + +  P     + R  +   IQ+
Sbjct: 39  PLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNVLVAFRRP---RPEWRPQQCFFIQH 95

Query: 120 SRTPGTIVHGN-VD-----GNSSLTIGRITGGMEFSRPIRPKWSGTAGLIFQRAGVRDDK 173
           S +P   VHG  VD     G+  + + ++  G++ S P   KWS T  + F+     +D 
Sbjct: 96  SLSPEIGVHGTPVDNFSRSGSGGVNLSKLALGLDLSEPASSKWSSTTSIKFEHVRPINDD 155

Query: 174 GDPIIKDCYSSPLTASGNTHDDTLLAKIETVYTGSGDHGSSMFVLNVEQGLPLLSEWLSF 233
           G  I +D    P+T SGNTHD  ++ K E+ +  + D G S F + +EQG+P++S+WL F
Sbjct: 156 GRAITRDLDGFPITCSGNTHDSMVVLKQESRFAKATDQGLSHFSMQIEQGIPVVSKWLIF 215

Query: 234 TRVNTRARKGVEIGPARILLSLSGGHVKGNFSPYEAFAIGGTNXXXXXXXXXXXXXXXXX 293
            R    A KGV  GPA +L SL+GG + G+ +PY+AFAIGG                   
Sbjct: 216 NRFKFVASKGVRFGPAFLLASLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCL 275

Query: 294 XXXXEISFPMFGPVEGVVFSDYGTDLGSGPTVPGDPAGARGKPGSGHGYGFGIRVDSPLG 353
               E++ P+    EG +F D GTDLGS   VPG+P+  +GKPG G+G+G+G+R  SPLG
Sbjct: 276 VANTELALPLNKMTEGTIFLDCGTDLGSSRLVPGNPSMRQGKPGFGYGFGYGLRFKSPLG 335

Query: 354 PLRLEYAFNDQKDKRFHFGV 373
            L+++YA N    K  +FGV
Sbjct: 336 HLQVDYAINAFNQKTLYFGV 355


>AT3G48620.1 | Symbols:  | Outer membrane OMP85 family protein |
           chr3:18016175-18017750 FORWARD LENGTH=321
          Length = 321

 Score =  127 bits (318), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 133/282 (47%), Gaps = 48/282 (17%)

Query: 137 LTIGRITGGMEFSRPIRPKWSGTAGLIFQ--------------RAGVRDDKGDPIIKDCY 182
           + + ++  G++ S P   KWS T  + F+              R  + D +     +  Y
Sbjct: 36  VNLSKLAVGLDLSEPASSKWSSTTSVKFEVPGHYLLQTLYMCVRLTMTDGRYQRSGRISY 95

Query: 183 S--SPLTASGNTHDDTLLAKIETVYTGSGDHGSSMFVLNVEQGLPLLSEWLSFTRVNTRA 240
           +  + L  SGNTHD  ++ K E+ +  + D G S F + +EQG+P++S WL F R    A
Sbjct: 96  NMQNSLLCSGNTHDSMVVLKQESRFAKATDQGLSHFSMQIEQGIPVVSNWLIFNRFKFVA 155

Query: 241 RKGVEIGPARILLSLSGGHVKGNFSPYEAFAIGGTNXXXXXXXXXXXXXXXXXXXXXEIS 300
            KGV  GPA  L SL+GG + G+ +PY+AFAIGG                       E++
Sbjct: 156 SKGVRFGPAFPLASLTGGSIVGDMTPYQAFAIGGLGSVRGYGEVAVGSGRSCLVANTELA 215

Query: 301 FPMFGPVEGVVFSDYGTDLGSGPTVP-----------------------------GDPAG 331
             M    EG +F D GTDLGS   VP                             G+P+ 
Sbjct: 216 NKM---TEGTIFLDCGTDLGSSRLVPVSSLYLLRTRTIKKLLRHENDKAVAELVSGNPSL 272

Query: 332 ARGKPGSGHGYGFGIRVDSPLGPLRLEYAFNDQKDKRFHFGV 373
            +GKPG G+G+G+G+R  SPLG L+++YA N    K  +FG+
Sbjct: 273 RQGKPGFGYGFGYGLRFKSPLGHLQVDYAMNAFNQKTLYFGI 314


>AT3G46740.1 | Symbols: TOC75-III, MAR1 | translocon at the outer
           envelope membrane of chloroplasts 75-III |
           chr3:17216104-17219296 REVERSE LENGTH=818
          Length = 818

 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 88/401 (21%), Positives = 147/401 (36%), Gaps = 49/401 (12%)

Query: 4   GKRDVETVLTMGIMEDVSIIPQPADAGK----VDLVMNVVERPXXXXXXXXXXXXXXXXX 59
           GK+ +  + ++G+  ++ + P+P +  +    V++ +  +E+                  
Sbjct: 409 GKKALSNINSLGLFSNIEVNPRPDEKNEGGIIVEIKLKELEQKSAEVSTEWSIVPGRGGA 468

Query: 60  PLRGLI---GSFAYSHRNVFGRNQKLNISLERG-----QIDSIFRINYTDPWIQGDDKRT 111
           P        GS  + HRN+ G N+ L  S+        Q D  F++ Y  P++ G     
Sbjct: 469 PTLASFQPGGSVTFEHRNLQGLNRSLMGSVTTSNFLNPQDDLSFKLEYVHPYLDGVYNPR 528

Query: 112 SRTIMIQ--NSRTPGTIVHGN--VDGNSSLTIGRITGGMEFSRPIRPKWSGTAGLIFQRA 167
           +RT      NSR    +  G   V+    + + R       +     +   T GL+ +  
Sbjct: 529 NRTFKTSCFNSRKLSPVFTGGPGVEEVPPIWVDRAGVKANITENFTRQSKFTYGLVMEEI 588

Query: 168 GVRDDKGDP------------IIKDCYSSPLTASGNTHDDTLLAKI---ETVYTGSGDHG 212
             RD+                I  D   + L+ +G      L A I    T +      G
Sbjct: 589 TTRDESSHIAANGQRLLPSGGISADGPPTTLSGTGVDRMAFLQANITRDNTKFVNGAVVG 648

Query: 213 SSMFVLNVEQGLPLLSEWLSFTRVNTRARKGVEIG-----------PARILLSLSGGHVK 261
               V  V+QGL + S++  F R      K +++            P  +L    GG V 
Sbjct: 649 QRT-VFQVDQGLGIGSKFPFFNRHQLTMTKFIQLREVEQGAGKSPPPVLVLHGHYGGCV- 706

Query: 262 GNFSPYEAFAIGGTNXXXXXXXXXXXXXXXXXXXXXEISFPMFGPVEGVVFSDYGTDLGS 321
           G+   Y+AF +GG                       EI  P+        F ++G DLGS
Sbjct: 707 GDLPSYDAFVLGGPYSVRGYNMGELGAARNIAEVGAEIRIPVKN-THVYAFVEHGNDLGS 765

Query: 322 GPTVPGDPAGARGKPGSGHGYGFGIRVDSPLGPLRLEYAFN 362
              V G+P     + G G  YG G++    LG +R EYA +
Sbjct: 766 SKDVKGNPTAVYRRTGQGSSYGAGVK----LGLVRAEYAVD 802


>AT4G09080.1 | Symbols: TOC75-IV, ATTOC75-IV | Outer membrane OMP85
           family protein | chr4:5804451-5806093 FORWARD LENGTH=396
          Length = 396

 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 76/190 (40%), Gaps = 19/190 (10%)

Query: 184 SPLTASGNTHDDTLLAKI--ETVYTGSGDHGSSMFVLNVEQGLPLLSEWLSFTRVNTRAR 241
           + L+ +G  H  TL A I  +     +G       +  V+QGL + + +  F R      
Sbjct: 195 TTLSGTGIDHIATLQANITRDNTKLVNGAVVGEKNIFQVDQGLGIGNNFPLFNRHQLSLT 254

Query: 242 -----KGVEIG------PARILLSLSGGHVKGNFSPYEAFAIGGTNXXXXXXXXXXXXXX 290
                K VE G      P  +L    GG + G+   Y+ FA+GG N              
Sbjct: 255 SFIQLKQVEEGSDKPQPPVLVLHGRYGGCI-GDLPSYDVFALGGPNSVRGYSMGELGAAK 313

Query: 291 XXXXXXXEISFPMFGPVEGVVFSDYGTDLGSGPTVPGDPAGARGKPGSGHGYGFGIRVDS 350
                  EI  P+        F+++G DLGS   V G+P G   K G G  YG G++   
Sbjct: 314 NILELGAEIRIPVKN-THVYAFAEHGNDLGSSKDVKGNPTGLYRKMGHGSSYGLGVK--- 369

Query: 351 PLGPLRLEYA 360
            LG +R EY 
Sbjct: 370 -LGMVRAEYT 378