Miyakogusa Predicted Gene

Lj3g3v1680450.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1680450.1 Non Chatacterized Hit- tr|I1M4Z3|I1M4Z3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,73.12,0,seg,NULL;
OS03G0268100 PROTEIN,NULL; HOMER,NULL; coiled-coil,NULL,CUFF.43032.1
         (402 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G59210.2 | Symbols:  | myosin heavy chain-related | chr5:2389...   407   e-114
AT5G59210.1 | Symbols:  | myosin heavy chain-related | chr5:2389...   407   e-114

>AT5G59210.2 | Symbols:  | myosin heavy chain-related |
           chr5:23890802-23893619 REVERSE LENGTH=433
          Length = 433

 Score =  407 bits (1047), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/437 (52%), Positives = 292/437 (66%), Gaps = 42/437 (9%)

Query: 1   MDSRHASLGRRTLEEIRQKRAAERLSKTSSGPDLTKVPTTSEIVGINKSDSANRLSESDI 60
           M+S HASLGRRTLEEIRQKRAA+RLSK SSGPDL+++P  ++   I KS+S NRLSE+D+
Sbjct: 1   MESHHASLGRRTLEEIRQKRAAQRLSKASSGPDLSEIPNPADFPVIRKSESGNRLSETDV 60

Query: 61  GALLSQINHLQRKNADLEDDNTKITLKLQTVEIDNAAMRKQLNDLEQSTVPSLRKALKDV 120
           GAL SQ+  LQ+KNA++E+ N  ++ KLQT E++N ++  +LN LEQ+TVPSLRKALK++
Sbjct: 61  GALYSQLKELQKKNAEMEERNKILSSKLQTKEVENESLETRLNVLEQNTVPSLRKALKEI 120

Query: 121 AMEKDAAVVAREDLSAQLRTLKKRLKEAEDEQYXXXXXXXXXXXXXNLIQQQTMNDTVST 180
           AMEKDAAVV REDLSAQ+RTLK+R+ +AE+EQY             N IQQQ M ++ + 
Sbjct: 121 AMEKDAAVVLREDLSAQVRTLKRRVNQAEEEQYRAEEDAASLRAELNSIQQQAMGNSFAG 180

Query: 181 ISSLGTPPDHLQRXXXXXXXXXXXXQRESLLRHQGQEQLATEQTRIASLMSEKQELEEKL 240
           +S +G  PD L              Q+ES+LR Q Q +LA EQTR+ASLMSEKQELE+K+
Sbjct: 181 MSPMGVSPDQLPILEKEMANLKLELQKESVLRQQEQHRLAEEQTRVASLMSEKQELEQKI 240

Query: 241 NSMSRXXXXXXXXXXXXXLSLEEKQKLDKQLHDMALVVERLESSRQKLLME--------- 291
           + +S               S+E+K+KL+KQLHDMA+ +ERLESSRQKLLME         
Sbjct: 241 SVLS--SRASVSESGQKVFSVEDKEKLEKQLHDMAVALERLESSRQKLLMEIDNQSSEIE 298

Query: 292 --------------------------VMECLKQNEELRGVLDKLRMEQASGLPDSFKNGG 325
                                     V ECLKQN ELR VLDKLR EQA     SF  G 
Sbjct: 299 KLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRTEQAG----SFSRGP 354

Query: 326 HEIGSSTSTG-EMASLKGQLVKEQSKAVALSAEVMQLSAQLEQVKQAYDGLSRFYRPVLR 384
            E  ++ S G +  SLKG+L KEQS+A +LSA+V+QLSAQL+Q  QAY+GL R Y+PVLR
Sbjct: 355 SEFEANGSHGTDTLSLKGELAKEQSRAESLSAQVLQLSAQLQQATQAYNGLMRIYKPVLR 414

Query: 385 NIESGLIKMKEDSPLAV 401
           NIES LIK+K+D  + V
Sbjct: 415 NIESSLIKLKQDGSVTV 431


>AT5G59210.1 | Symbols:  | myosin heavy chain-related |
           chr5:23890802-23893619 REVERSE LENGTH=434
          Length = 434

 Score =  407 bits (1046), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/437 (52%), Positives = 292/437 (66%), Gaps = 41/437 (9%)

Query: 1   MDSRHASLGRRTLEEIRQKRAAERLSKTSSGPDLTKVPTTSEIVGINKSDSANRLSESDI 60
           M+S HASLGRRTLEEIRQKRAA+RLSK SSGPDL+++P  ++   I KS+S NRLSE+D+
Sbjct: 1   MESHHASLGRRTLEEIRQKRAAQRLSKASSGPDLSEIPNPADFPVIRKSESGNRLSETDV 60

Query: 61  GALLSQINHLQRKNADLEDDNTKITLKLQTVEIDNAAMRKQLNDLEQSTVPSLRKALKDV 120
           GAL SQ+  LQ+KNA++E+ N  ++ KLQT E++N ++  +LN LEQ+TVPSLRKALK++
Sbjct: 61  GALYSQLKELQKKNAEMEERNKILSSKLQTKEVENESLETRLNVLEQNTVPSLRKALKEI 120

Query: 121 AMEKDAAVVAREDLSAQLRTLKKRLKEAEDEQYXXXXXXXXXXXXXNLIQQQTMNDTVST 180
           AMEKDAAVV REDLSAQ+RTLK+R+ +AE+EQY             N IQQQ M ++ + 
Sbjct: 121 AMEKDAAVVLREDLSAQVRTLKRRVNQAEEEQYRAEEDAASLRAELNSIQQQAMGNSFAG 180

Query: 181 ISSLGTPPDHLQRXXXXXXXXXXXXQRESLLRHQGQEQLATEQTRIASLMSEKQELEEKL 240
           +S +G  PD L              Q+ES+LR Q Q +LA EQTR+ASLMSEKQELE+K+
Sbjct: 181 MSPMGVSPDQLPILEKEMANLKLELQKESVLRQQEQHRLAEEQTRVASLMSEKQELEQKI 240

Query: 241 NSMSRXXXXXXXXXXXXXLSLEEKQKLDKQLHDMALVVERLESSRQKLLME--------- 291
           + +S               S+E+K+KL+KQLHDMA+ +ERLESSRQKLLME         
Sbjct: 241 SVLS-SRASEVSESGQKVFSVEDKEKLEKQLHDMAVALERLESSRQKLLMEIDNQSSEIE 299

Query: 292 --------------------------VMECLKQNEELRGVLDKLRMEQASGLPDSFKNGG 325
                                     V ECLKQN ELR VLDKLR EQA     SF  G 
Sbjct: 300 KLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRTEQAG----SFSRGP 355

Query: 326 HEIGSSTSTG-EMASLKGQLVKEQSKAVALSAEVMQLSAQLEQVKQAYDGLSRFYRPVLR 384
            E  ++ S G +  SLKG+L KEQS+A +LSA+V+QLSAQL+Q  QAY+GL R Y+PVLR
Sbjct: 356 SEFEANGSHGTDTLSLKGELAKEQSRAESLSAQVLQLSAQLQQATQAYNGLMRIYKPVLR 415

Query: 385 NIESGLIKMKEDSPLAV 401
           NIES LIK+K+D  + V
Sbjct: 416 NIESSLIKLKQDGSVTV 432