Miyakogusa Predicted Gene

Lj3g3v1680390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1680390.1 tr|Q9STE9|Q9STE9_ARATH Serine/threonine
kinase-like protein OS=Arabidopsis thaliana GN=T6H20.220
PE=,28.91,8e-16,coiled-coil,NULL; seg,NULL,gene.g47873.t1.1
         (433 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G46750.1 | Symbols:  | unknown protein; Has 2631 Blast hits t...    70   2e-12

>AT3G46750.1 | Symbols:  | unknown protein; Has 2631 Blast hits to
           1984 proteins in 271 species: Archae - 6; Bacteria -
           163; Metazoa - 1232; Fungi - 253; Plants - 141; Viruses
           - 8; Other Eukaryotes - 828 (source: NCBI BLink). |
           chr3:17219944-17221461 FORWARD LENGTH=388
          Length = 388

 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 27/114 (23%)

Query: 66  YQKKSVLAKVKEKARRLRTSLSGKRRQE---DGNLTPSW--------------------- 101
           + KKS+ +K+K+KA++L+ SLS K+R +   D  ++P                       
Sbjct: 57  HHKKSLFSKMKDKAKKLQHSLSTKKRHDEEGDATMSPFCRSEDHEVREVGYASLSPRDKS 116

Query: 102 ---GVSLXXXXXXXXXXXYLGAPIYESELAPEDYKENARQHPRANPVISEKRVL 152
               V             YLGAP+YES+ APE+ KE ARQHPR NPVI+E  VL
Sbjct: 117 KDRKVREEGGEEEEEDPEYLGAPMYESKKAPEELKETARQHPRENPVITETNVL 170