Miyakogusa Predicted Gene

Lj3g3v1667280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1667280.1 Non Chatacterized Hit- tr|I1MGE4|I1MGE4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27058
PE,77.27,0.000000000003, ,CUFF.42972.1
         (71 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G06610.1 | Symbols:  | DNA-binding enhancer protein-related |...    68   1e-12

>AT3G06610.1 | Symbols:  | DNA-binding enhancer protein-related |
          chr3:2060837-2061845 FORWARD LENGTH=115
          Length = 115

 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/43 (76%), Positives = 39/43 (90%), Gaps = 1/43 (2%)

Query: 1  MEGAEE-GVEMMLDSKDMQQQSKAFDKLTEGVEDRQVDSTRVQ 42
          MEGAEE G E+ +DSKD+QQQSKAFDKLT+ VEDRQ+DS+RVQ
Sbjct: 1  MEGAEEAGAEIAVDSKDLQQQSKAFDKLTDRVEDRQLDSSRVQ 43