Miyakogusa Predicted Gene

Lj3g3v1631800.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1631800.1 tr|I0Z597|I0Z597_9CHLO Mitochondrial import inner
membrane translocase subunit Tim9 OS=Coccomyxa
sub,44.94,3e-17,MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE
SUBUNIT TIM9,NULL; zf-Tim10_DDP,Mitochondrial inner
,NODE_75838_length_678_cov_10.312684.path2.1
         (96 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G46560.1 | Symbols: TIM9, emb2474 | Tim10/DDP family zinc fin...   132   3e-32

>AT3G46560.1 | Symbols: TIM9, emb2474 | Tim10/DDP family zinc
          finger protein | chr3:17138632-17139301 FORWARD
          LENGTH=93
          Length = 93

 Score =  132 bits (333), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 78/93 (83%)

Query: 1  MDKKVIADLDNLPEEDKQRMSTMVDQLQTRDSLRMYNSIVERCFKNCVNTFYRKSLTKHE 60
          MD  ++A LD LPEEDK +M++M+DQLQ RDSLRMYNS+VERCF +CV++F RKSL K E
Sbjct: 1  MDASMMAGLDGLPEEDKAKMASMIDQLQLRDSLRMYNSLVERCFVDCVDSFTRKSLQKQE 60

Query: 61 ETCVLRCAEKFVRLSTQVGLRFSDLNLGASTKD 93
          ETCV+RCAEKF++ + +VG+RF++LN  A T+D
Sbjct: 61 ETCVMRCAEKFLKHTMRVGMRFAELNQNAPTQD 93