Miyakogusa Predicted Gene
- Lj3g3v1606140.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1606140.1 Non Chatacterized Hit- tr|K4CA30|K4CA30_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,34.54,1e-16,DUF740,Uncharacterised protein family UPF0503;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,,CUFF.42865.1
(577 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G09070.1 | Symbols: | Protein of unknown function (DUF740) |... 95 1e-19
AT2G38070.1 | Symbols: | Protein of unknown function (DUF740) |... 89 7e-18
AT5G01170.1 | Symbols: | Protein of unknown function (DUF740) |... 85 1e-16
>AT3G09070.1 | Symbols: | Protein of unknown function (DUF740) |
chr3:2768880-2770937 REVERSE LENGTH=685
Length = 685
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 67/117 (57%), Gaps = 14/117 (11%)
Query: 13 HRPSTSCHRHPDGQFTGFCPSCLCERLTVLHPTTP-------------SSSSIVPARKXX 59
HR STSC+RHP+ +FTGFCPSCLCERL+VL T S++++ K
Sbjct: 25 HRLSTSCNRHPEERFTGFCPSCLCERLSVLDQTNNGGSSSSSKKPPTISAAALKALFKPS 84
Query: 60 XXXXXXXLXXXXXXXXX-XXXPELRRSKSFSASKANEALSGAFEPQRKSCDVRVRGA 115
+ PELRR+KSFSASK NE SG FEPQR+SCDVR+R +
Sbjct: 85 GNNGVGGVNTNGNGRVKPGFFPELRRTKSFSASKNNEGFSGVFEPQRRSCDVRLRSS 141
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 176/468 (37%), Gaps = 106/468 (22%)
Query: 189 LKTMKDHIDLDSSQTKKP--KGSFWSAASVFSKKLXXXXXXXXXXXXXX------XEGAL 240
LK +KD+IDLDS QTKKP + SFWSAASVFSKKL L
Sbjct: 245 LKPIKDYIDLDS-QTKKPSVRRSFWSAASVFSKKLQKWRQNQKMKKRRNGGDHRPGSARL 303
Query: 241 PAGKPTGRHFRES----------RRSRTT----GSDGGPATLTRDSHWTPLGRGS----R 282
P KP GR R++ RRS T D G +L +GR S R
Sbjct: 304 PVEKPIGRQLRDTQSEIADYGYGRRSCDTDPRFSLDAGRFSLDAGRFSVDIGRISLDDPR 363
Query: 283 LTLGGCRPMIRGTPL-----------TSRXTMLSVVEDAPPPP-VNVLRTDAQIP----- 325
+ R G+ + +MLSVVEDAPPP +V R D Q P
Sbjct: 364 YSFDEPRASWDGSLIGRTMFPPAARAPPPPSMLSVVEDAPPPVHRHVTRADMQFPVEEPA 423
Query: 326 -----------VEEPPVEDDAVPGGSAQTREYYXXXXXXXXXXXXXXXXXXXXEIGG--- 371
V +P + +PGGS QTR+YY
Sbjct: 424 PPPPVVNQTNGVSDPVI----IPGGSIQTRDYYTDSSSRRRKSLDRSSSSMRKTAAAVVA 479
Query: 372 --DELIRSVSNGSIIXXXXXXXXXXXXXXDFIHGAKMG-FQD----RGDDCCSEVYGNGE 424
DE SVS S I + A G F++ GD +V N
Sbjct: 480 DMDEPKLSVS--SAISIDAYSGSLRDNNNYAVETADNGSFREPAMMIGD---RKVNSNDN 534
Query: 425 RKEEKKSRRWSIWGLIHRRGRNK-----DEDDGKCSRVNG--VERCFSEDHXXXXXXXXX 477
K+ ++ +WSI GLI+R+ NK +E++ + R+NG VER SE
Sbjct: 535 NKKSRRWGKWSILGLIYRKSVNKYEEEEEEEEDRYRRLNGGMVERSLSESWPELRNGGGG 594
Query: 478 XXXXXXXXXXXXTQAFTGSLGTQSQRRNIXXXXXXXXXXXXXDEFVLERNRSARYSPSSV 537
++ S G +++ N + RN+S+RYSP +
Sbjct: 595 GGGPRMVRSNSNV-SWRSSGGGSARKVN----------------GLDRRNKSSRYSPKNG 637
Query: 538 DNGLLRFYLAPMXXXXXXXXXXXX--------XXXQAQSIARSVIGLY 577
+NG+L+FYL M SIARSV+ LY
Sbjct: 638 ENGMLKFYLPHMKASRRMSGTGGAGGGGGGGWANSHGHSIARSVMRLY 685
>AT2G38070.1 | Symbols: | Protein of unknown function (DUF740) |
chr2:15928737-15930596 FORWARD LENGTH=619
Length = 619
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 16 STSCHRHPDGQFTGFCPSCLCERLTVLHPTTPSSSSIVPARKXXXXXXXX-XLXXXXXXX 74
STSC RHPD +FTGFCPSCL +RL+VL T +++++ + K
Sbjct: 35 STSCDRHPDERFTGFCPSCLFDRLSVLDITGKNNNAVASSSKKPPSSSAALKAIFKPSSS 94
Query: 75 XXXXXPELRRSKSFSASKANEALSGAFEPQRKSCDVRVR 113
PELRR+KSFSASKA GAFEPQR+SCDVRVR
Sbjct: 95 SGSFFPELRRTKSFSASKAEAFSLGAFEPQRRSCDVRVR 133
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 120/310 (38%), Gaps = 74/310 (23%)
Query: 204 KKPKGSFWSAASVFSKKLXXXXXXXXXXXXXXXE-----GALPAGKPTGRHFRES----- 253
K+ GSFWSAASVFSKKL ALP K GR R++
Sbjct: 239 KEIAGSFWSAASVFSKKLQKWRQKQKLKKHRTGNLGAGSSALPVEKAIGRQLRDTQSEIA 298
Query: 254 -----RRSRTT----GSDGGPATLT---------RDSHWTPLGRGSRLTLGGCRPMIRGT 295
RRS T D G +L R S P +G R
Sbjct: 299 EYGYGRRSCDTDPRFSIDAGRFSLDAGRVSVDDPRYSFEEPRASWDGYLIG------RAA 352
Query: 296 PLTSRXTMLSVVEDAPPPPVNVLRTDAQIPVEEPP-----VEDDAVPGGSAQTREYYXXX 350
+MLSVVED+P +V R+D IPVE+ P V D+ VPGGSAQTREYY
Sbjct: 353 APMRMPSMLSVVEDSPVRN-HVHRSDTHIPVEKSPQVSEAVIDEIVPGGSAQTREYYLDS 411
Query: 351 XXXXXXXXXXXXXXXXXEIGGDELIRSVSNGSIIXXXXXXXXXXXXXXDFI-HGAKMGFQ 409
R +S + D + H +
Sbjct: 412 SSSRRRKSLDRS----------SSTRKLSASVMAEIDELKLTQDREAKDLVSHSNSL--- 458
Query: 410 DRGDDCCSEVYGNGE-------------RKEEKKSR-RWSIWGLIHRRGRNKDEDDGKCS 455
DDCCS V N E +K KKSR W+I+GL+HR+ NK E++
Sbjct: 459 --RDDCCS-VENNYEMGVRENVGTIECNKKRTKKSRWSWNIFGLLHRKNGNKYEEE---E 512
Query: 456 RVNGVERCFS 465
R +GV+R FS
Sbjct: 513 RRSGVDRTFS 522
>AT5G01170.1 | Symbols: | Protein of unknown function (DUF740) |
chr5:58315-60021 FORWARD LENGTH=568
Length = 568
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 13 HRPSTSCHRHPDGQFTGFCPSCLCERLTVL-HPTTPSSSSIVPARKXXXXXXXXXLXXXX 71
HR STSC HP+ +F+GFCPSCLC+RL+VL H P SS L
Sbjct: 23 HRLSTSCDLHPEERFSGFCPSCLCDRLSVLDHNAAPPPSSSSRKPPSISAVSLKALFKPS 82
Query: 72 XXXXXXXX----------PELRRSKSFSASKANEALSGAFEPQRKSCDVRVR 113
PELRR+KSFSA K NE SG FEPQR+SCDVR+R
Sbjct: 83 SSGTNNSNGNGRVRPGFFPELRRTKSFSA-KNNEGFSGGFEPQRRSCDVRLR 133