Miyakogusa Predicted Gene

Lj3g3v1605120.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1605120.1 Non Chatacterized Hit- tr|Q0AQZ6|Q0AQZ6_MARMM
Putative uncharacterized protein OS=Maricaulis maris
(,47.47,2e-19,DUF962,Protein of unknown function DUF962;
seg,NULL,CUFF.42862.1
         (112 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G09085.1 | Symbols:  | Protein of unknown function (DUF962) |...   129   3e-31

>AT3G09085.1 | Symbols:  | Protein of unknown function (DUF962) |
           chr3:2782238-2782576 FORWARD LENGTH=112
          Length = 112

 Score =  129 bits (325), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 73/111 (65%)

Query: 1   MNFRSSEDFWVYYMNHHSKPSTRRWHFVGTLFSIXXXXXXXXXXXXXXXXXXXXGYGCAV 60
           MNFRS E+FW +YM  HS PSTRR HF+G + SI                    GYG A 
Sbjct: 1   MNFRSFEEFWPFYMMQHSNPSTRRLHFIGIIASIVALICSILINWWFLALVPLLGYGFAW 60

Query: 61  YSHLFVERNFPATFGYPFWSVLCDLKMFGFMLTGKMDREIKRLGKRPVLQV 111
           YSH FVE N PA+FG+P WS LCDLKMF  MLTG M+RE+KRLGKRP+LQ+
Sbjct: 61  YSHFFVEGNVPASFGHPLWSFLCDLKMFSLMLTGSMEREMKRLGKRPLLQL 111