Miyakogusa Predicted Gene

Lj3g3v1603940.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1603940.1 Non Chatacterized Hit- tr|D8T269|D8T269_SELML
Putative uncharacterized protein OS=Selaginella
moelle,35.61,0.0000000001,Cysteine proteinases,NULL; OTU,Ovarian
tumour, otubain; SUBFAMILY NOT NAMED,NULL; HIV-INDUCED
PROTEI,CUFF.42848.1
         (198 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38025.1 | Symbols:  | Cysteine proteinases superfamily prote...   225   1e-59
AT3G57810.1 | Symbols:  | Cysteine proteinases superfamily prote...    65   2e-11
AT3G57810.3 | Symbols:  | Cysteine proteinases superfamily prote...    65   2e-11
AT3G57810.2 | Symbols:  | Cysteine proteinases superfamily prote...    65   2e-11

>AT2G38025.1 | Symbols:  | Cysteine proteinases superfamily protein
           | chr2:15915239-15916692 REVERSE LENGTH=234
          Length = 234

 Score =  225 bits (574), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/200 (64%), Positives = 152/200 (76%), Gaps = 13/200 (6%)

Query: 7   NEDILEQMRNGSAKFELVSDSPVPSIAA------LPNRNASFFGVGNSSS-LFFARVGSL 59
           N +ILEQ+RNG A+FELVS SP  S++       LP   ASF      +S +FFAR+ S 
Sbjct: 8   NNNILEQLRNGFARFELVS-SPTASVSDSISSTSLP---ASFISTTKGNSYVFFARINSS 63

Query: 60  FSGQSPAMKKVERLSVHKVTGDGRCLFRALVKGMAHNKGVALNQREERESADELRMAVKE 119
            + +SPA KKVE+ +V +V GDGRCLFRALVKGMA NKG+ LN + ER+ ADELRMAVKE
Sbjct: 64  MN-RSPAAKKVEKYAVDRVKGDGRCLFRALVKGMAFNKGITLNPQRERDDADELRMAVKE 122

Query: 120 VICENEGERKLYEEALIAITVDEPLPRYCKRIVRSDFWGGESELLVLSKLCKQPVIVYIP 179
           VIC +  ER+ Y+EAL+AITVDE L R+C+RI R DFWGGESELLVLSKLCKQP+IVYIP
Sbjct: 123 VICNDPKEREKYKEALVAITVDESLKRFCQRIGRHDFWGGESELLVLSKLCKQPIIVYIP 182

Query: 180 EHEH-RGSGRGSGFIPIAEY 198
           EHEH RG G G GFIPI EY
Sbjct: 183 EHEHGRGGGYGPGFIPIQEY 202


>AT3G57810.1 | Symbols:  | Cysteine proteinases superfamily protein
           | chr3:21416336-21417809 FORWARD LENGTH=274
          Length = 274

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 15/126 (11%)

Query: 74  SVHKVTGDGRCLFRALVKGMAHNKG-VALNQREERESADELRMAVKEVICENEGERKLYE 132
           S+  + GDGRCLFR++  G     G +A  ++ +RE ADELR  V +   +   E + + 
Sbjct: 126 SIIGIPGDGRCLFRSVAHGFCLRSGKLAPGEKMQRELADELRTRVADEFIQRRQETEWF- 184

Query: 133 EALIAITVDEPLPRYCKRIVRSDFWGGESELLVLSKLCKQPVIVYIPEHEHRGSGRGSGF 192
                  V+     Y ++I     WGGE EL + S + + P+ VY+ +       +  G 
Sbjct: 185 -------VEGDFDTYVRQIRDPHVWGGEPELFMASHVLQMPITVYMKD------DKAGGL 231

Query: 193 IPIAEY 198
           I IAEY
Sbjct: 232 ISIAEY 237


>AT3G57810.3 | Symbols:  | Cysteine proteinases superfamily protein
           | chr3:21416336-21417809 FORWARD LENGTH=317
          Length = 317

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 15/126 (11%)

Query: 74  SVHKVTGDGRCLFRALVKGMAHNKG-VALNQREERESADELRMAVKEVICENEGERKLYE 132
           S+  + GDGRCLFR++  G     G +A  ++ +RE ADELR  V +   +   E + + 
Sbjct: 169 SIIGIPGDGRCLFRSVAHGFCLRSGKLAPGEKMQRELADELRTRVADEFIQRRQETEWF- 227

Query: 133 EALIAITVDEPLPRYCKRIVRSDFWGGESELLVLSKLCKQPVIVYIPEHEHRGSGRGSGF 192
                  V+     Y ++I     WGGE EL + S + + P+ VY+ +       +  G 
Sbjct: 228 -------VEGDFDTYVRQIRDPHVWGGEPELFMASHVLQMPITVYMKD------DKAGGL 274

Query: 193 IPIAEY 198
           I IAEY
Sbjct: 275 ISIAEY 280


>AT3G57810.2 | Symbols:  | Cysteine proteinases superfamily protein
           | chr3:21416336-21417809 FORWARD LENGTH=317
          Length = 317

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 15/126 (11%)

Query: 74  SVHKVTGDGRCLFRALVKGMAHNKG-VALNQREERESADELRMAVKEVICENEGERKLYE 132
           S+  + GDGRCLFR++  G     G +A  ++ +RE ADELR  V +   +   E + + 
Sbjct: 169 SIIGIPGDGRCLFRSVAHGFCLRSGKLAPGEKMQRELADELRTRVADEFIQRRQETEWF- 227

Query: 133 EALIAITVDEPLPRYCKRIVRSDFWGGESELLVLSKLCKQPVIVYIPEHEHRGSGRGSGF 192
                  V+     Y ++I     WGGE EL + S + + P+ VY+ +       +  G 
Sbjct: 228 -------VEGDFDTYVRQIRDPHVWGGEPELFMASHVLQMPITVYMKD------DKAGGL 274

Query: 193 IPIAEY 198
           I IAEY
Sbjct: 275 ISIAEY 280