Miyakogusa Predicted Gene

Lj3g3v1591670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1591670.1 tr|G7JTF7|G7JTF7_MEDTR 2-oxoisovalerate
dehydrogenase subunit beta OS=Medicago truncatula
GN=MTR_4g0,89.47,0,Transketolase, pyrimidine binding
domain,Transketolase-like, pyrimidine-binding domain; BRANCHED
CHA,CUFF.42825.1
         (360 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G13450.1 | Symbols: DIN4 | Transketolase family protein | chr...   629   0.0  
AT1G55510.1 | Symbols: BCDH BETA1 | branched-chain alpha-keto ac...   627   e-180
AT5G50850.1 | Symbols: MAB1 | Transketolase family protein | chr...   228   6e-60
AT1G30120.1 | Symbols: PDH-E1 BETA | pyruvate dehydrogenase E1 b...   217   1e-56
AT2G34590.1 | Symbols:  | Transketolase family protein | chr2:14...   214   1e-55
AT5G11380.1 | Symbols: DXPS3 | 1-deoxy-D-xylulose 5-phosphate sy...    49   5e-06

>AT3G13450.1 | Symbols: DIN4 | Transketolase family protein |
           chr3:4382340-4384295 REVERSE LENGTH=358
          Length = 358

 Score =  629 bits (1623), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 296/331 (89%), Positives = 319/331 (96%), Gaps = 1/331 (0%)

Query: 30  KDAAEQGLKSMNLYSAINQALHIALDSDPRAYVFGEDVSFGGVFRCTTGLADRFGKNRVL 89
           ++ +E G KSMNLYSAINQALHIAL++DPR+YVFGEDV FGGVFRCTTGLA+RFGK+RV 
Sbjct: 29  ENVSESG-KSMNLYSAINQALHIALETDPRSYVFGEDVGFGGVFRCTTGLAERFGKSRVF 87

Query: 90  NTPLCEQGIIGFGIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGL 149
           NTPLCEQGI+GFGIGLAAMGNR IAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGL
Sbjct: 88  NTPLCEQGIVGFGIGLAAMGNRVIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGL 147

Query: 150 TIRAPYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPQQAKGLLLSSIRDPNPVVFFEP 209
           TIRAPYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSP++AKGLLLSSIRDPNPVVFFEP
Sbjct: 148 TIRAPYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPREAKGLLLSSIRDPNPVVFFEP 207

Query: 210 KWLYRLAVEEVPEDDYMLPLSEAEVVRQGSDITLVGWGAQLSIMEQACADAEKEGISCEL 269
           KWLYR AVE+VPEDDYM+PLSEAEV+R+GSDITLVGWGAQL+IMEQAC DAE EGISCEL
Sbjct: 208 KWLYRQAVEDVPEDDYMIPLSEAEVMREGSDITLVGWGAQLTIMEQACLDAENEGISCEL 267

Query: 270 IDLKTLIPWDKETVEASVKKTGRLLVSHEAPITGGFGAEISASIVERCFSRLEAPVARVC 329
           IDLKTLIPWDKE VE SV+KTGRLL+SHEAP+TGGFGAEI+A+IVERCF RLEAPV+RVC
Sbjct: 268 IDLKTLIPWDKEIVETSVRKTGRLLISHEAPVTGGFGAEIAATIVERCFLRLEAPVSRVC 327

Query: 330 GLDTPFPLVFEPFYMPTKNKILDAIKSTVNY 360
           GLDTPFPLVFEPFYMPTKNKILDAI+STVNY
Sbjct: 328 GLDTPFPLVFEPFYMPTKNKILDAIRSTVNY 358


>AT1G55510.1 | Symbols: BCDH BETA1 | branched-chain alpha-keto acid
           decarboxylase E1 beta subunit | chr1:20723482-20725505
           FORWARD LENGTH=352
          Length = 352

 Score =  627 bits (1618), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 293/323 (90%), Positives = 314/323 (97%)

Query: 38  KSMNLYSAINQALHIALDSDPRAYVFGEDVSFGGVFRCTTGLADRFGKNRVLNTPLCEQG 97
           K +NLYSAINQALHIALD+DPR+YVFGEDV FGGVFRCTTGLA+RFGKNRV NTPLCEQG
Sbjct: 30  KPLNLYSAINQALHIALDTDPRSYVFGEDVGFGGVFRCTTGLAERFGKNRVFNTPLCEQG 89

Query: 98  IIGFGIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRAPYGA 157
           I+GFGIGLAAMGNRAI EIQFADYI+PAFDQIVNEAAKFRYRSGNQFNCGGLTIRAPYGA
Sbjct: 90  IVGFGIGLAAMGNRAIVEIQFADYIYPAFDQIVNEAAKFRYRSGNQFNCGGLTIRAPYGA 149

Query: 158 VGHGGHYHSQSPEAFFCHVPGIKVVIPRSPQQAKGLLLSSIRDPNPVVFFEPKWLYRLAV 217
           VGHGGHYHSQSPEAFFCHVPGIKVVIPRSP++AKGLLLS IRDPNPVVFFEPKWLYR AV
Sbjct: 150 VGHGGHYHSQSPEAFFCHVPGIKVVIPRSPREAKGLLLSCIRDPNPVVFFEPKWLYRQAV 209

Query: 218 EEVPEDDYMLPLSEAEVVRQGSDITLVGWGAQLSIMEQACADAEKEGISCELIDLKTLIP 277
           EEVPE DYM+PLSEAEV+R+G+DITLVGWGAQL++MEQAC DAEKEGISCELIDLKTL+P
Sbjct: 210 EEVPEHDYMIPLSEAEVIREGNDITLVGWGAQLTVMEQACLDAEKEGISCELIDLKTLLP 269

Query: 278 WDKETVEASVKKTGRLLVSHEAPITGGFGAEISASIVERCFSRLEAPVARVCGLDTPFPL 337
           WDKETVEASVKKTGRLL+SHEAP+TGGFGAEISA+I+ERCF +LEAPV+RVCGLDTPFPL
Sbjct: 270 WDKETVEASVKKTGRLLISHEAPVTGGFGAEISATILERCFLKLEAPVSRVCGLDTPFPL 329

Query: 338 VFEPFYMPTKNKILDAIKSTVNY 360
           VFEPFYMPTKNKILDAIKSTVNY
Sbjct: 330 VFEPFYMPTKNKILDAIKSTVNY 352


>AT5G50850.1 | Symbols: MAB1 | Transketolase family protein |
           chr5:20689671-20692976 FORWARD LENGTH=363
          Length = 363

 Score =  228 bits (580), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 124/326 (38%), Positives = 185/326 (56%), Gaps = 7/326 (2%)

Query: 36  GLKSMNLYSAINQALHIALDSDPRAYVFGEDV-SFGGVFRCTTGLADRFGKNRVLNTPLC 94
           G K M +  A+N A+   + +DP+ +V GE+V  + G ++ T GL +++G  RV +TP+ 
Sbjct: 32  GAKEMTVRDALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPIT 91

Query: 95  EQGIIGFGIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRAP 154
           E G  G G+G A  G + + E    ++   A D I+N AAK  Y S  Q N   +  R P
Sbjct: 92  EAGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVP-IVFRGP 150

Query: 155 YGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPQQAKGLLLSSIRDPNPVVFFEPKWLYR 214
            GA    G  HSQ   A++  VPG+KV+ P S + A+GLL ++IRDP+PVVF E + LY 
Sbjct: 151 NGAAAGVGAQHSQCYAAWYASVPGLKVLAPYSAEDARGLLKAAIRDPDPVVFLENELLYG 210

Query: 215 LAV---EEVPEDDYMLPLSEAEVVRQGSDITLVGWGAQLSIMEQACADAEKEGISCELID 271
            +    EE  +  + LP+ +A++ R+G D+T+V +   +    +A     +EGIS E+I+
Sbjct: 211 ESFPISEEALDSSFCLPIGKAKIEREGKDVTIVTFSKMVGFALKAAEKLAEEGISAEVIN 270

Query: 272 LKTLIPWDKETVEASVKKTGRLLVSHEAPITGGFGAEISASIVERCFSRLEAPVARVCGL 331
           L+++ P D+ T+ ASV+KT RL+   E     G  AEI AS+VE  FS L+APV R+ G 
Sbjct: 271 LRSIRPLDRATINASVRKTSRLVTVEEGFPQHGVCAEICASVVEESFSYLDAPVERIAGA 330

Query: 332 DTPFPLV--FEPFYMPTKNKILDAIK 355
           D P P     E   +P    I+ A K
Sbjct: 331 DVPMPYAANLERLALPQIEDIVRASK 356


>AT1G30120.1 | Symbols: PDH-E1 BETA | pyruvate dehydrogenase E1 beta
           | chr1:10584350-10586477 REVERSE LENGTH=406
          Length = 406

 Score =  217 bits (552), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/296 (40%), Positives = 169/296 (57%), Gaps = 3/296 (1%)

Query: 42  LYSAINQALHIALDSDPRAYVFGEDVS-FGGVFRCTTGLADRFGKNRVLNTPLCEQGIIG 100
           L+ A+ + L   +D DP   V GEDV  +GG ++ T GLAD+FG  RVL+TP+CE    G
Sbjct: 88  LFEALQEGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKFGDLRVLDTPICENAFTG 147

Query: 101 FGIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRAPYGAVGH 160
            GIG A  G R + E     ++  AF+QI N      Y SG QF    + IR P G    
Sbjct: 148 MGIGAAMTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIP-VVIRGPGGVGRQ 206

Query: 161 GGHYHSQSPEAFFCHVPGIKVVIPRSPQQAKGLLLSSIRDPNPVVFFEPKWLYRLAVEEV 220
            G  HSQ  E++F  +PGI++V   +P  AKGL+ ++IR  NPV+ FE   LY L  E++
Sbjct: 207 LGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLK-EKI 265

Query: 221 PEDDYMLPLSEAEVVRQGSDITLVGWGAQLSIMEQACADAEKEGISCELIDLKTLIPWDK 280
           P++DY+  L EAE+VR G  IT++ +      + QA      +G   E+ID+++L P+D 
Sbjct: 266 PDEDYVCNLEEAEMVRPGEHITILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDL 325

Query: 281 ETVEASVKKTGRLLVSHEAPITGGFGAEISASIVERCFSRLEAPVARVCGLDTPFP 336
            T+  SVKKT R+L+  E   TGG GA ++A+I E     L+APV  +   D P P
Sbjct: 326 HTIGNSVKKTHRVLIVEECMRTGGIGASLTAAINENFHDYLDAPVMCLSSQDVPTP 381


>AT2G34590.1 | Symbols:  | Transketolase family protein |
           chr2:14568956-14570844 REVERSE LENGTH=406
          Length = 406

 Score =  214 bits (544), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 119/296 (40%), Positives = 168/296 (56%), Gaps = 3/296 (1%)

Query: 42  LYSAINQALHIALDSDPRAYVFGEDVS-FGGVFRCTTGLADRFGKNRVLNTPLCEQGIIG 100
           L+ A+ + L   +D DP   V GEDV  +GG ++ T GLAD+FG  RVL+TP+CE    G
Sbjct: 88  LFEALQEGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKFGDLRVLDTPICENAFTG 147

Query: 101 FGIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRAPYGAVGH 160
            GIG A  G R + E     ++  AF+QI N      Y SG QF    + IR P G    
Sbjct: 148 MGIGAAMTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIP-VVIRGPGGVGRQ 206

Query: 161 GGHYHSQSPEAFFCHVPGIKVVIPRSPQQAKGLLLSSIRDPNPVVFFEPKWLYRLAVEEV 220
            G  HSQ  E++F  +PGI++V   +P  AKGL+ ++IR  NPV+ FE   LY L  E +
Sbjct: 207 LGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLK-ESI 265

Query: 221 PEDDYMLPLSEAEVVRQGSDITLVGWGAQLSIMEQACADAEKEGISCELIDLKTLIPWDK 280
           P+++Y+  L EAE+VR G  IT++ +      + QA      +G   E+ID+++L P+D 
Sbjct: 266 PDEEYICNLEEAEMVRPGEHITILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDL 325

Query: 281 ETVEASVKKTGRLLVSHEAPITGGFGAEISASIVERCFSRLEAPVARVCGLDTPFP 336
            T+  SVKKT R+L+  E   TGG GA ++A+I E     L+APV  +   D P P
Sbjct: 326 YTIGNSVKKTHRVLIVEECMRTGGIGASLTAAINENFHDYLDAPVMCLSSQDVPTP 381


>AT5G11380.1 | Symbols: DXPS3 | 1-deoxy-D-xylulose 5-phosphate
           synthase 3 | chr5:3630172-3633250 FORWARD LENGTH=700
          Length = 700

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 44/273 (16%)

Query: 50  LHIALDSDPRAYVFGEDVSFGGVFRCTTGLADRFGKNRVLNTPLCEQGIIGFGIGLAAMG 109
           +H  ++ DP    F E                RF  +R  N  + EQ  + F  GL++ G
Sbjct: 403 VHAGMEMDPSLLTFQE----------------RF-PDRFFNVGMAEQHAVTFSAGLSSGG 445

Query: 110 NRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRAPYGAVGHGGHYHSQSP 169
            +    I  A ++  A+DQ+V++    R R   +F      +    G VG  G     + 
Sbjct: 446 LKPFCIIPSA-FLQRAYDQVVHDVD--RQRKAVRF------VITSAGLVGSDGPVQCGAF 496

Query: 170 E-AFFCHVPGIKVVIPRSPQQAKGLLLSS--IRDPNPVVFFEPKWLYRLAVEEVPEDDYM 226
           + AF   +P +  + P    +   ++ ++  + D  PV F  P+         +   +Y+
Sbjct: 497 DIAFMSSLPNMIAMAPADEDELVNMVATAAYVTD-RPVCFRFPRG-------SIVNMNYL 548

Query: 227 LP------LSEAEVVRQGSDITLVGWGAQLSIMEQACADAEKEGISCELIDLKTLIPWDK 280
           +P      +    V+ +G D+ L+G+GA +     A +   K G++  + D +   P D 
Sbjct: 549 VPTGLPIEIGRGRVLVEGQDVALLGYGAMVQNCLHAHSLLSKLGLNVTVADARFCKPLDI 608

Query: 281 ETVEASVKKTGRLLVSHEAPITGGFGAEISASI 313
           + V   + +  + L++ E    GGFG+ ++  I
Sbjct: 609 KLVR-DLCQNHKFLITVEEGCVGGFGSHVAQFI 640