Miyakogusa Predicted Gene

Lj3g3v1591640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1591640.1 tr|A4SA98|A4SA98_OSTLU DMT family transporter:
GDP-mannose (Fragment) OS=Ostreococcus lucimarinus
(s,28.82,1e-18,SUBFAMILY NOT NAMED,NULL; SOLUTE CARRIER FAMILY
35,NULL; Multidrug resistance efflux transporter Emr,CUFF.42819.1
         (313 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G76340.1 | Symbols: GONST3 | golgi nucleotide sugar transport...   443   e-125
AT5G19980.1 | Symbols: GONST4 | golgi nucleotide sugar transport...   230   9e-61

>AT1G76340.1 | Symbols: GONST3 | golgi nucleotide sugar transporter
           3 | chr1:28635188-28636306 REVERSE LENGTH=372
          Length = 372

 Score =  443 bits (1140), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 217/314 (69%), Positives = 244/314 (77%), Gaps = 1/314 (0%)

Query: 1   MKFPYPGALTALQYFTSAAGVFLCGRVKLIEHDKLDLLTLWRFLPAAVIFYLSLFTNSEL 60
           MKFPYPGALTA+QYFTSAAGV LC ++KLIEHD L+LLT+WRFLPAA+IFYLSLFTNSEL
Sbjct: 58  MKFPYPGALTAMQYFTSAAGVLLCAQMKLIEHDSLNLLTMWRFLPAAMIFYLSLFTNSEL 117

Query: 61  LLHANVDTFIVFRSAVPIFVAVGETLFLHQPWPSAKTWGSLGTIFAGSVLYVATDYQFTF 120
           LLHANVDTFIVFRSAVPIFVA+GETLFLHQPWPS KTWGSL TIF GS+LYV TDYQFT 
Sbjct: 118 LLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSVKTWGSLATIFGGSLLYVFTDYQFTI 177

Query: 121 MAYTWAVAYLISMTIDFVYIKHVVMTIGLNTWGXXXXXXXXXXXXXXXXXXXXXXXKKIK 180
            AY+WA+AYL+SMTIDFVYIKHVVMTIGLNTWG                       KKIK
Sbjct: 178 AAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIK 237

Query: 181 HDIKDESDWHSFAVVLPVXXXXXXXXXXXXXXXXXRRAISATGFTVLGIVNKLLTVVINL 240
           H+I DE+DW+S  VVLPV                 RRAISATGFTVLGIVNKLLTVVINL
Sbjct: 238 HEITDETDWYSLQVVLPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINL 297

Query: 241 VIWDKHSTWVGTVGLLICMLGGVMYQQST-SKPKAAKQATAQENDEEQQKLIEMQVNSET 299
           ++WDKHST+VGT+GLL+CM GGVMYQQST  KP A ++A  QE DEEQ+KL+EMQ N E+
Sbjct: 298 MVWDKHSTFVGTLGLLVCMFGGVMYQQSTIKKPNATQEAKPQEQDEEQEKLLEMQENKES 357

Query: 300 DISGNEDNKSKEEK 313
           +    ++    EEK
Sbjct: 358 NSVDIKETLKSEEK 371


>AT5G19980.1 | Symbols: GONST4 | golgi nucleotide sugar transporter
           4 | chr5:6749907-6750932 REVERSE LENGTH=341
          Length = 341

 Score =  230 bits (587), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 133/304 (43%), Positives = 173/304 (56%), Gaps = 12/304 (3%)

Query: 3   FPYPGALTALQYFTSAAGVFLCGRVKLIEHDKLDLLTLWRFLPAAVIFYLSLFTNSELLL 62
           F YPG LTALQY T    V+L G+  LI HD     T  +FLPAA++FYL++FTN+ LL 
Sbjct: 39  FNYPGLLTALQYLTCTVAVYLLGKSGLINHDPFTWDTAKKFLPAAIVFYLAIFTNTNLLR 98

Query: 63  HANVDTFIVFRSAVPIFVAVGETLFLHQPWPSAKTWGSLGTIFAGSVLYVATDYQFTFMA 122
           HANVDTFIVFRS  P+ VA+ +T+F  QP PS  T+ SL  I AG+V YVATD  FT  A
Sbjct: 99  HANVDTFIVFRSLTPLLVAIADTVFRSQPLPSRLTFLSLVVILAGAVGYVATDSSFTLTA 158

Query: 123 YTWAVAYLISMTIDFVYIKHVVMTIGLNTWGXXXXXXXXXXXXXXXXXXXXXXXKKIKHD 182
           Y+WA+AYL+++T + VYIKH+V  I LN WG                        ++   
Sbjct: 159 YSWALAYLVTITTEMVYIKHMVSNIKLNIWGLVLYNNLLSLMIAPVFWFLTGEFTEVFAA 218

Query: 183 IKDES----DWHSFAVVLPVXXXXXXXXXXXXXXXXXRRAISATGFTVLGIVNKLLTVVI 238
           + +      + ++F+    V                 R AISAT FTV G+VNK LTVVI
Sbjct: 219 LSENRGNLFEPYAFS---SVAASCVFGFLISYFGFAARNAISATAFTVTGVVNKFLTVVI 275

Query: 239 NLVIWDKHSTWVGTVGLLICMLGGVMYQQSTSKPK-----AAKQATAQENDEEQQKLIEM 293
           N++IWDKH+T VG V LL  + GGV YQQS    K     + K +   E DEE  +L+  
Sbjct: 276 NVLIWDKHATPVGLVCLLFTICGGVGYQQSVKLDKPIEKVSEKDSEKGEEDEELTQLVPG 335

Query: 294 QVNS 297
           ++ S
Sbjct: 336 KLAS 339