Miyakogusa Predicted Gene
- Lj3g3v1543510.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1543510.1 Non Chatacterized Hit- tr|I1JFF5|I1JFF5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,87.5,0,GPROTEINBRPT,G-protein beta WD-40 repeat; WD40
repeats,WD40 repeat; WD40,WD40 repeat; FERTILIZATION-,CUFF.42795.1
(373 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G20740.1 | Symbols: FIE, FIS3, FIE1 | Transducin/WD40 repeat-... 595 e-170
AT1G79990.1 | Symbols: | structural molecules | chr1:30084522-3... 64 2e-10
AT1G79990.3 | Symbols: | structural molecules | chr1:30085910-3... 64 3e-10
AT1G79990.5 | Symbols: | structural molecules | chr1:30085910-3... 63 3e-10
AT1G52360.1 | Symbols: | Coatomer, beta' subunit | chr1:1949928... 62 5e-10
AT1G52360.2 | Symbols: | Coatomer, beta' subunit | chr1:1949942... 62 5e-10
AT3G15980.4 | Symbols: | Coatomer, beta' subunit | chr3:5411699... 62 7e-10
AT3G15980.5 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 62 7e-10
AT3G15980.1 | Symbols: | Coatomer, beta' subunit | chr3:5411699... 62 7e-10
AT3G15980.3 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 62 8e-10
AT3G15980.2 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 62 8e-10
AT2G21390.1 | Symbols: | Coatomer, alpha subunit | chr2:9152428... 59 4e-09
AT1G62020.1 | Symbols: | Coatomer, alpha subunit | chr1:2291981... 58 1e-08
AT1G18080.1 | Symbols: ATARCA, RACK1A_AT, RACK1A | Transducin/WD... 57 2e-08
AT1G48630.1 | Symbols: RACK1B_AT | receptor for activated C kina... 57 2e-08
AT1G48870.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 56 4e-08
AT3G18130.1 | Symbols: RACK1C_AT | receptor for activated C kina... 56 5e-08
AT5G54200.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 54 2e-07
AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 53 3e-07
AT5G24320.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 53 3e-07
AT5G24320.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 53 3e-07
AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 52 7e-07
AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 52 8e-07
AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protei... 51 1e-06
AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 | chr5:867... 51 1e-06
AT5G53500.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 2e-06
AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 2e-06
AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40 r... 50 2e-06
AT3G15470.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 3e-06
AT1G73720.1 | Symbols: SMU1 | transducin family protein / WD-40 ... 49 8e-06
AT4G29830.1 | Symbols: VIP3 | Transducin/WD40 repeat-like superf... 48 8e-06
AT1G15440.2 | Symbols: PWP2 | periodic tryptophan protein 2 | ch... 48 9e-06
AT1G15440.1 | Symbols: PWP2, ATPWP2 | periodic tryptophan protei... 48 9e-06
AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 48 1e-05
>AT3G20740.1 | Symbols: FIE, FIS3, FIE1 | Transducin/WD40
repeat-like superfamily protein | chr3:7249064-7252254
REVERSE LENGTH=369
Length = 369
Score = 595 bits (1535), Expect = e-170, Method: Compositional matrix adjust.
Identities = 275/369 (74%), Positives = 316/369 (85%), Gaps = 1/369 (0%)
Query: 1 MSKLSALGCEPVTGNPLAPKKRDYKVTNRLQEGKRPLYAVVFNFIDSRYVNVFATVGGNR 60
MSK++ LG E + G+ K+ YKVTNR+QEGK+PLYAVVFNF+D+R+ +VF T GGNR
Sbjct: 1 MSKIT-LGNESIVGSLTPSNKKSYKVTNRIQEGKKPLYAVVFNFLDARFFDVFVTAGGNR 59
Query: 61 VTIYQCLEGGVIAVLQSYVDEDKDESFYTVSWACSVDGNPFVVAGGINGIIRVIDTGSEK 120
+T+Y CL G I+ LQSY DEDK+ESFYTVSWAC V+GNP+V AGG+ GIIRVID SE
Sbjct: 60 ITLYNCLGDGAISALQSYADEDKEESFYTVSWACGVNGNPYVAAGGVKGIIRVIDVNSET 119
Query: 121 IHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRLWNVHTGVCILIFAGAGGHRNEVLS 180
IHKS VGHGDSVNEIRTQ LKP LVI+ASKDESVRLWNV TG+CILIFAGAGGHR EVLS
Sbjct: 120 IHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICILIFAGAGGHRYEVLS 179
Query: 181 VDFHPSDMNKIASCGMDNTVKIWSMKEFSSYVEKSFTWTDLPSKFPTKYVQFPIFNATVH 240
VDFHPSD+ + ASCGMD T+KIWSMKEF +YVEKSFTWTD PSKFPTK+VQFP+F A++H
Sbjct: 180 VDFHPSDIYRFASCGMDTTIKIWSMKEFWTYVEKSFTWTDDPSKFPTKFVQFPVFTASIH 239
Query: 241 TNYVDCTRWLGDFVLSKSVDNEILLWEPKVKEQTPGEGVVDVLQRYPVAECDIWFIKFSC 300
TNYVDC RW GDF+LSKSVDNEILLWEP++KE +PGEG DVL RYPV CDIWFIKFSC
Sbjct: 240 TNYVDCNRWFGDFILSKSVDNEILLWEPQLKENSPGEGASDVLLRYPVPMCDIWFIKFSC 299
Query: 301 DFHFKEVAIGNREGKIFVWELQSSPPVLVSRLSHLQSKSVIRQTAMSYDGSTILCCCEDG 360
D H VAIGN+EGK++VW+L+S PPVL+++LSH QSKSVIRQTAMS DGSTIL CCEDG
Sbjct: 300 DLHLSSVAIGNQEGKVYVWDLKSCPPVLITKLSHNQSKSVIRQTAMSVDGSTILACCEDG 359
Query: 361 TIWRWDAVT 369
TIWRWD +T
Sbjct: 360 TIWRWDVIT 368
>AT1G79990.1 | Symbols: | structural molecules |
chr1:30084522-30091949 FORWARD LENGTH=1135
Length = 1135
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSL--VISASKDESVRLWN 158
+VVAG + IRV + + K F H D IR + P+L V+S+S D ++LW+
Sbjct: 286 WVVAGADDMFIRVYNYNTMDKIKVFEAHADY---IRCVAVHPTLPYVLSSSDDMLIKLWD 342
Query: 159 VHTG-VCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
G +C IF G H + V+ V F+P D N AS +D T+KIW++
Sbjct: 343 WEKGWLCTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 387
>AT1G79990.3 | Symbols: | structural molecules |
chr1:30085910-30091949 FORWARD LENGTH=920
Length = 920
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSL--VISASKDESVRLWN 158
+VVAG + IRV + + K F H D IR + P+L V+S+S D ++LW+
Sbjct: 71 WVVAGADDMFIRVYNYNTMDKIKVFEAHADY---IRCVAVHPTLPYVLSSSDDMLIKLWD 127
Query: 159 VHTG-VCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
G +C IF G H + V+ V F+P D N AS +D T+KIW++
Sbjct: 128 WEKGWLCTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
>AT1G79990.5 | Symbols: | structural molecules |
chr1:30085910-30091949 FORWARD LENGTH=912
Length = 912
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSL--VISASKDESVRLWN 158
+VVAG + IRV + + K F H D IR + P+L V+S+S D ++LW+
Sbjct: 71 WVVAGADDMFIRVYNYNTMDKIKVFEAHADY---IRCVAVHPTLPYVLSSSDDMLIKLWD 127
Query: 159 VHTG-VCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
G +C IF G H + V+ V F+P D N AS +D T+KIW++
Sbjct: 128 WEKGWLCTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
>AT1G52360.1 | Symbols: | Coatomer, beta' subunit |
chr1:19499282-19505397 FORWARD LENGTH=926
Length = 926
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSL--VISASKDESVRLWN 158
+VVAG + IRV + + K F H D IR + P+L V+S+S D ++LW+
Sbjct: 71 WVVAGADDMYIRVYNYNTMDKVKVFEAHSDY---IRCVAVHPTLPYVLSSSDDMLIKLWD 127
Query: 159 VHTG-VCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
G C IF G H + V+ V F+P D N AS +D T+KIW++
Sbjct: 128 WEKGWACTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
>AT1G52360.2 | Symbols: | Coatomer, beta' subunit |
chr1:19499420-19505397 FORWARD LENGTH=970
Length = 970
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSL--VISASKDESVRLWN 158
+VVAG + IRV + + K F H D IR + P+L V+S+S D ++LW+
Sbjct: 115 WVVAGADDMYIRVYNYNTMDKVKVFEAHSDY---IRCVAVHPTLPYVLSSSDDMLIKLWD 171
Query: 159 VHTG-VCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
G C IF G H + V+ V F+P D N AS +D T+KIW++
Sbjct: 172 WEKGWACTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 216
>AT3G15980.4 | Symbols: | Coatomer, beta' subunit |
chr3:5411699-5418313 REVERSE LENGTH=914
Length = 914
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSL--VISASKDESVRLWN 158
+VVAG + IRV + + K F H D IR + P+L V+S+S D ++LW+
Sbjct: 71 WVVAGADDMYIRVYNYNTMDKVKVFEAHSDY---IRCVAVHPTLPYVLSSSDDMLIKLWD 127
Query: 159 VHTG-VCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
G C IF G H + V+ V F+P D N AS +D T+KIW++
Sbjct: 128 WENGWACTQIFEG---HSHYVMQVVFNPKDTNTFASASLDRTIKIWNL 172
>AT3G15980.5 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=930
Length = 930
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSL--VISASKDESVRLWN 158
+VVAG + IRV + + K F H D IR + P+L V+S+S D ++LW+
Sbjct: 71 WVVAGADDMYIRVYNYNTMDKVKVFEAHSDY---IRCVAVHPTLPYVLSSSDDMLIKLWD 127
Query: 159 VHTG-VCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
G C IF G H + V+ V F+P D N AS +D T+KIW++
Sbjct: 128 WENGWACTQIFEG---HSHYVMQVVFNPKDTNTFASASLDRTIKIWNL 172
>AT3G15980.1 | Symbols: | Coatomer, beta' subunit |
chr3:5411699-5418313 REVERSE LENGTH=909
Length = 909
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSL--VISASKDESVRLWN 158
+VVAG + IRV + + K F H D IR + P+L V+S+S D ++LW+
Sbjct: 71 WVVAGADDMYIRVYNYNTMDKVKVFEAHSDY---IRCVAVHPTLPYVLSSSDDMLIKLWD 127
Query: 159 VHTG-VCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
G C IF G H + V+ V F+P D N AS +D T+KIW++
Sbjct: 128 WENGWACTQIFEG---HSHYVMQVVFNPKDTNTFASASLDRTIKIWNL 172
>AT3G15980.3 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=918
Length = 918
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSL--VISASKDESVRLWN 158
+VVAG + IRV + + K F H D IR + P+L V+S+S D ++LW+
Sbjct: 71 WVVAGADDMYIRVYNYNTMDKVKVFEAHSDY---IRCVAVHPTLPYVLSSSDDMLIKLWD 127
Query: 159 VHTG-VCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
G C IF G H + V+ V F+P D N AS +D T+KIW++
Sbjct: 128 WENGWACTQIFEG---HSHYVMQVVFNPKDTNTFASASLDRTIKIWNL 172
>AT3G15980.2 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=918
Length = 918
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSL--VISASKDESVRLWN 158
+VVAG + IRV + + K F H D IR + P+L V+S+S D ++LW+
Sbjct: 71 WVVAGADDMYIRVYNYNTMDKVKVFEAHSDY---IRCVAVHPTLPYVLSSSDDMLIKLWD 127
Query: 159 VHTG-VCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
G C IF G H + V+ V F+P D N AS +D T+KIW++
Sbjct: 128 WENGWACTQIFEG---HSHYVMQVVFNPKDTNTFASASLDRTIKIWNL 172
>AT2G21390.1 | Symbols: | Coatomer, alpha subunit |
chr2:9152428-9156577 FORWARD LENGTH=1218
Length = 1218
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 97 DGNPFVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRL 156
+ P V+GG + I+V + + + + +GH D + ++ P ++SAS D+++R+
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENP-WIVSASDDQTIRI 119
Query: 157 WNVHTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
WN + CI + GH + V+ FHP + + + S +D TV++W +
Sbjct: 120 WNWQSRTCISVLT---GHNHYVMCASFHPKE-DLVVSASLDQTVRVWDI 164
>AT1G62020.1 | Symbols: | Coatomer, alpha subunit |
chr1:22919814-22923728 FORWARD LENGTH=1216
Length = 1216
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 97 DGNPFVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRL 156
+ P V+GG + I+V + + + + +GH D + ++ P ++SAS D+++R+
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYP-WIVSASDDQTIRI 119
Query: 157 WNVHTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
WN + C+ + GH + V+ FHP + + + S +D TV++W +
Sbjct: 120 WNWQSRTCVSVLT---GHNHYVMCASFHPKE-DLVVSASLDQTVRVWDI 164
>AT1G18080.1 | Symbols: ATARCA, RACK1A_AT, RACK1A | Transducin/WD40
repeat-like superfamily protein | chr1:6222325-6223901
FORWARD LENGTH=327
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 95 SVDGNPFVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESV 154
S DG F ++G +G +R+ D + + FVGH V + +L ++SAS+D ++
Sbjct: 72 SSDGQ-FALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSV-AFSLDNRQIVSASRDRTI 129
Query: 155 RLWNVHTGVCILIFAGAGGHRNEVLSVDFHPSDMN-KIASCGMDNTVKIWSM 205
+LWN I G GHR+ V V F P+ + I S D TVK+W++
Sbjct: 130 KLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL 181
>AT1G48630.1 | Symbols: RACK1B_AT | receptor for activated C kinase
1B | chr1:17981977-17983268 REVERSE LENGTH=326
Length = 326
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 95 SVDGNPFVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESV 154
S DG F ++G +G +R+ D + + + FVGH V + T ++SAS+D ++
Sbjct: 72 SSDGQ-FALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFST-DNRQIVSASRDRTI 129
Query: 155 RLWNVHTGVCILIFAGAGGHRNEVLSVDFHPSDM-NKIASCGMDNTVKIWSMK 206
+LWN G C + A GH+ V V F P+ + I S D TVK+W+++
Sbjct: 130 KLWNT-LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ 181
>AT1G48870.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:18072325-18074457 REVERSE LENGTH=593
Length = 593
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 40/157 (25%)
Query: 95 SVDGNPFVVAGGINGIIRVID-TGSEKIHKSFVGHGDSVNEIRTQTLKP----------- 142
S DG ++ GG +G++++ T S+ + SF+ + +N+ L P
Sbjct: 207 SPDGK-YLATGGEDGVVKIWRITLSDSLLASFLRQQEPINQQAALVLFPQKAFHIEETPF 265
Query: 143 ------------------SLVISASKDESVRLWNVHTGVCILIFAGAGGHRNEVLSVDFH 184
+L++SASKD++VRLW C+ +F H N V V+F+
Sbjct: 266 QELYGHTGDVLDLAWSDSNLLLSASKDKTVRLWRTGCDQCLHVFH----HNNYVTCVEFN 321
Query: 185 PSDMNKIASCGMDNTVKIWSMKEFSSYVEKSFTWTDL 221
P + N AS +D +IW + E E+ WTD+
Sbjct: 322 PVNKNNFASGSIDGKARIWGLSE-----ERVVAWTDV 353
>AT3G18130.1 | Symbols: RACK1C_AT | receptor for activated C kinase
1C | chr3:6211109-6212371 REVERSE LENGTH=326
Length = 326
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 95 SVDGNPFVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESV 154
S DG F ++G +G +R+ D + + + FVGH V + T ++SAS+D ++
Sbjct: 72 SSDGQ-FALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFST-DNRQIVSASRDRTI 129
Query: 155 RLWNVHTGVCILIFAGAGGHRNEVLSVDFHPSDM-NKIASCGMDNTVKIWSMK 206
+LWN G C + GH+ V V F P+ + I S D TVK+W+++
Sbjct: 130 KLWNT-LGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ 181
>AT5G54200.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:21993565-21997076 REVERSE LENGTH=825
Length = 825
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 118 SEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRLWNVHTGVCILIFAGAGGHRNE 177
SEK SFVGH D V ++ K ++S+S D++VRLW++ + C+ +F+ H +
Sbjct: 457 SEKPVCSFVGHLDDVLDLSWS--KSQHLLSSSMDKTVRLWDLSSKTCLKVFS----HSDY 510
Query: 178 VLSVDFHPSDMNKIASCGMDNTVKIWSMKEFSSYVEKSFTWTDL 221
V + F+P D N S +D V+IWS+ + + W DL
Sbjct: 511 VTCIQFNPVDDNYFISGSLDAKVRIWSIPD-----HQVVDWNDL 549
>AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:3733406-3739363 FORWARD LENGTH=1021
Length = 1021
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRLWNVH 160
V+AG +G+I++ D K+ ++F GH + + + + S S D ++R+W+
Sbjct: 72 LVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG-EFLASGSSDTNLRVWDTR 130
Query: 161 TGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
CI + GH + +++F P D + S G+DN VK+W +
Sbjct: 131 KKGCIQTYK---GHTRGISTIEFSP-DGRWVVSGGLDNVVKVWDL 171
>AT5G24320.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:8284858-8287651 REVERSE LENGTH=698
Length = 698
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 110 IIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRLWNVHTGVCILIFA 169
I RV+D + +H+ F+GH + +I K + ++SAS D SVRLW + C+ IF+
Sbjct: 341 IFRVLD---KPLHE-FLGHSGDILDISWS--KNNRLLSASVDNSVRLWQIGCEDCLGIFS 394
Query: 170 GAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSMKE 207
H N V SV F+P D + S +D V+IWS +
Sbjct: 395 ----HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>AT5G24320.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:8284858-8287651 REVERSE LENGTH=694
Length = 694
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 110 IIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRLWNVHTGVCILIFA 169
I RV+D + +H+ F+GH + +I K + ++SAS D SVRLW + C+ IF+
Sbjct: 341 IFRVLD---KPLHE-FLGHSGDILDISWS--KNNRLLSASVDNSVRLWQIGCEDCLGIFS 394
Query: 170 GAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSMKE 207
H N V SV F+P D + S +D V+IWS +
Sbjct: 395 ----HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1179
Length = 1179
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRLWNVH 160
V+AG +G+I++ D K+ ++F GH + + + + S S D ++++W++
Sbjct: 72 LVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFG-EFLASGSSDANLKIWDIR 130
Query: 161 TGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
CI + GH + ++ F P D + S G+DN VK+W +
Sbjct: 131 KKGCIQTYK---GHSRGISTIRFTP-DGRWVVSGGLDNVVKVWDL 171
>AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1181
Length = 1181
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRLWNVH 160
V+AG +G+I++ D K+ ++F GH + + + + S S D ++++W++
Sbjct: 72 LVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFG-EFLASGSSDANLKIWDIR 130
Query: 161 TGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSM 205
CI + GH + ++ F P D + S G+DN VK+W +
Sbjct: 131 KKGCIQTYK---GHSRGISTIRFTP-DGRWVVSGGLDNVVKVWDL 171
>AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protein /
small nuclear ribonucleoprotein Prp4p-related |
chr2:17304319-17306855 REVERSE LENGTH=554
Length = 554
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 25 KVTNR---LQEGKRPLYAVVFNFIDSRYVNVFATVGGNRVTIYQCLEGGVIAVLQSYVDE 81
+VTN L++ K VVF+ +D + AT +R +G ++ + ++D
Sbjct: 286 QVTNTIAVLKDHKERATDVVFSPVD----DCLATASADRTAKLWKTDGTLLQTFEGHLDR 341
Query: 82 DKDESFYTVSWACSVDGNPFVVAGGINGIIRV--IDTGSEKIHKSFVGHGDSVNEIRTQT 139
+F+ ++ + R+ I+TG+E + + GH SV I Q
Sbjct: 342 LARVAFHP--------SGKYLGTTSYDKTWRLWDINTGAELLLQE--GHSRSVYGIAFQQ 391
Query: 140 LKPSLVISASKDESVRLWNVHTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNT 199
+L S D R+W++ TG IL+F GH V SV+F P+ + +AS G DN
Sbjct: 392 -DGALAASCGLDSLARVWDLRTGRSILVFQ---GHIKPVFSVNFSPNGYH-LASGGEDNQ 446
Query: 200 VKIWSMK 206
+IW ++
Sbjct: 447 CRIWDLR 453
>AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 |
chr5:8677117-8682058 FORWARD LENGTH=669
Length = 669
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 100/251 (39%), Gaps = 49/251 (19%)
Query: 125 FVGHGDSVNEIRTQTLKP--SLVISASKDESVRLWNVHTGVCILIFAGAGGHRNEVLSVD 182
+GH V + T P V+S+S D ++RLW+ ++ + G H V
Sbjct: 414 LLGHSGPV---YSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKG---HNYPVWDAQ 467
Query: 183 FHPSDMNKIASCGMDNTVKIWSMKEFSSYVEKSFTWTDLPSKFPTKYVQFPIFNATVHTN 242
F P + ASC D T +IWSM P+ H +
Sbjct: 468 FSPFG-HYFASCSHDRTARIWSMDRIQ-----------------------PLRIMAGHLS 503
Query: 243 YVDCTRWLG--DFVLSKSVDNEILLWEPKVKEQTPGEGVVDVLQRYPVAECDIWFIKFSC 300
VDC +W +++ + S D + LW+ + GE V + + + + S
Sbjct: 504 DVDCVQWHPNCNYIATGSSDKTVRLWDVQT-----GECVRIFIGHRSM----VLSLAMSP 554
Query: 301 DFHFKEVAIGNREGKIFVWELQSSPPVLVSRLSHLQSKSVIRQTAMSYDGSTILCCCEDG 360
D + +A G+ +G I +W+L S+ + + H S + + S +GS + D
Sbjct: 555 DGRY--MASGDEDGTIMMWDL-STARCITPLMGH---NSCVWSLSYSGEGSLLASGSADC 608
Query: 361 TIWRWDAVTNS 371
T+ WD +++
Sbjct: 609 TVKLWDVTSST 619
>AT5G53500.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:21726167-21728524 REVERSE LENGTH=654
Length = 654
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 119 EKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRLWNVHTGVCILIFAGAGGHRNEV 178
EK F GH V +I K + ++SAS D++VRLW V + C+ +FA H + V
Sbjct: 318 EKPLYEFRGHTGEVLDISWS--KDNYLLSASMDKTVRLWKVGSNDCLGVFA----HNSYV 371
Query: 179 LSVDFHPSDMNKIASCGMDNTVKIWSM 205
SV F+P + N S +D V+IW++
Sbjct: 372 TSVQFNPVNENYFMSGSIDGKVRIWNI 398
>AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:18413690-18415223 FORWARD LENGTH=317
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRT--QTLKPSLVISASKDESVRLWN 158
F++ G ++ +R+ + S K K++ GH ++ I + ++S S+D V +W
Sbjct: 212 FILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE 271
Query: 159 VHTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSMKE 207
+++ + GH V++V HP++ N IAS +D TV+IW+ K+
Sbjct: 272 LNSK---KLLQKLEGHTETVMNVACHPTE-NLIASGSLDKTVRIWTQKK 316
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 101 FVVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRLWNVH 160
F+V+ + +++ D + + K+ +GH + + + ++++S S DE+VR+W+V
Sbjct: 85 FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP-QSNMIVSGSFDETVRIWDVT 143
Query: 161 TGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSMKEFSSYVEKSFTWTD 220
TG C+ + H + V +VDF+ D + I S D +IW + + K+ +
Sbjct: 144 TGKCLKVLP---AHSDPVTAVDFN-RDGSLIVSSSYDGLCRIWDSG--TGHCVKTLIDDE 197
Query: 221 LPSKFPTKYVQFPIFNATVHTNYVDCTRWLGDFVLSKSVDNEILLW 266
P P +V+F G F+L ++DN + LW
Sbjct: 198 NP---PVSFVRFSPN---------------GKFILVGTLDNTLRLW 225
>AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40
repeat family protein | chr5:5504541-5509266 REVERSE
LENGTH=876
Length = 876
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 111 IRVIDTGSEKIHKSFVGHGDSVNEIRT--QTLKPSLVISASKDESVRLWNVHTGVCILIF 168
+RV D + GH + V + T + L+++ SKD++VRLWN + CI
Sbjct: 383 VRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCI--- 439
Query: 169 AGAG-GHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSMKEFSSYVEK 214
G G GH ++L+V F + S D T+K+WS+ S E+
Sbjct: 440 -GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEE 485
>AT3G15470.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:5216630-5219868 REVERSE LENGTH=883
Length = 883
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 118 SEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRLWNVHTGVCILIFAGAGGHRNE 177
SEK SF GH D V ++ K ++S+S D++VRLWN+ + C+ +F+ H +
Sbjct: 502 SEKPFCSFQGHVDDVLDLAWS--KSQHLLSSSMDKTVRLWNLSSQTCLKVFS----HSDY 555
Query: 178 VLSVDFHPSDMNKIASCGMDNTVKIWSMKE 207
V + F+P D S +D V++WS+ +
Sbjct: 556 VTCIQFNPVDDRYFISGSLDAKVRVWSIPD 585
>AT1G73720.1 | Symbols: SMU1 | transducin family protein / WD-40
repeat family protein | chr1:27725059-27729722 FORWARD
LENGTH=511
Length = 511
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 102/251 (40%), Gaps = 55/251 (21%)
Query: 95 SVDGNPFVVAGGINGIIRVIDTGSEKIHK--------SFVGHGDSVNEIRTQTLKPSLVI 146
S DG F+ + ++G I V D S K+ K SF+ H D V I + ++
Sbjct: 222 SPDGQ-FLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDF-SRDSEMLA 279
Query: 147 SASKDESVRLWNVHTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSMK 206
S S+D +++W + TGVCI F H V S+ F D +++ S D T +I +K
Sbjct: 280 SGSQDGKIKIWRIRTGVCIRRF---DAHSQGVTSLSF-SRDGSQLLSTSFDQTARIHGLK 335
Query: 207 EFSSYVEKSFTWTDLPSKFPTKYVQFPIFNATVHTNYVDCTRWLGDFVLSKSVDNEILLW 266
S + K F + T YV IF + G +++ S D + +W
Sbjct: 336 --SGKLLKEF-------RGHTSYVNHAIFTSD------------GSRIITASSDCTVKVW 374
Query: 267 EPKV-------KEQTPGEGV---VDVLQRYP-----VAECD----IWFIKFSCDFHFKEV 307
+ K K P G V+ + +P + C+ I+ + K
Sbjct: 375 DSKTTDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCNKTSSIYIMTLQGQV-VKSF 433
Query: 308 AIGNREGKIFV 318
+ GNREG FV
Sbjct: 434 SSGNREGGDFV 444
>AT4G29830.1 | Symbols: VIP3 | Transducin/WD40 repeat-like
superfamily protein | chr4:14597728-14599157 FORWARD
LENGTH=321
Length = 321
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 105 GGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKDESVRLWNVHTGVC 164
G ++G I V D K+ GH V + + P ++ S S D V N+H
Sbjct: 176 GSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHV---NMHDAEG 232
Query: 165 ILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSMK 206
+ GH + VLSVD P D IA+ D TV++W +K
Sbjct: 233 KTLLGSMSGHTSWVLSVDASP-DGGAIATGSSDRTVRLWDLK 273
>AT1G15440.2 | Symbols: PWP2 | periodic tryptophan protein 2 |
chr1:5306159-5309460 REVERSE LENGTH=860
Length = 860
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 127 GHGDSVNEIRTQTLKPSLVISASKDESVRLWNVHTGVCILIFAGAGGHRNEVLSVDFHPS 186
GH VN + T + L+ + + D V++WNV +G C + F H N V ++ F +
Sbjct: 347 GHYFDVNCV-TYSPDSQLLATGADDNKVKVWNVMSGTCFITFT---EHTNAVTALHFM-A 401
Query: 187 DMNKIASCGMDNTVKIWSMKEFSSYVEKSFTWTDLPSKF 225
D + + S +D TV+ W K + +Y K++T T P +F
Sbjct: 402 DNHSLLSASLDGTVRAWDFKRYKNY--KTYT-TPTPRQF 437
>AT1G15440.1 | Symbols: PWP2, ATPWP2 | periodic tryptophan protein 2
| chr1:5306159-5309460 REVERSE LENGTH=900
Length = 900
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 127 GHGDSVNEIRTQTLKPSLVISASKDESVRLWNVHTGVCILIFAGAGGHRNEVLSVDFHPS 186
GH VN + T + L+ + + D V++WNV +G C + F H N V ++ F +
Sbjct: 387 GHYFDVNCV-TYSPDSQLLATGADDNKVKVWNVMSGTCFITFT---EHTNAVTALHFM-A 441
Query: 187 DMNKIASCGMDNTVKIWSMKEFSSYVEKSFTWTDLPSKF 225
D + + S +D TV+ W K + +Y K++T T P +F
Sbjct: 442 DNHSLLSASLDGTVRAWDFKRYKNY--KTYT-TPTPRQF 477
>AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=836
Length = 836
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 95 SVDGNPF---VVAGGINGIIRVIDTGSEKIHKSFVGHGDSVNEIRTQTLKPSLVISASKD 151
SVD +PF +G ++ +++ D + ++ GH VN +R T V+S +D
Sbjct: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRF-TPDGRWVVSGGED 164
Query: 152 ESVRLWNVHTGVCILIFAGAGGHRNEVLSVDFHPSDMNKIASCGMDNTVKIWSMKEF 208
V++W++ G + F H ++ S+DFHP + +A+ D TVK W ++ F
Sbjct: 165 NIVKVWDLTAGKLLTEFKS---HEGQIQSLDFHPHEF-LLATGSADRTVKFWDLETF 217