Miyakogusa Predicted Gene
- Lj3g3v1541350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1541350.1 Non Chatacterized Hit- tr|K4CX67|K4CX67_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,49.41,0.00000000000003,no description,NULL; P21-Rho-binding
domain,PAK-box/P21-Rho-binding; seg,NULL;
PBD,PAK-box/P21-Rho-b,gene.g47605.t1.1
(141 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G33460.1 | Symbols: RIC1 | ROP-interactive CRIB motif-contain... 70 5e-13
AT4G28556.1 | Symbols: RIC7 | PAK-box/P21-Rho-binding family pro... 69 1e-12
AT4G04900.1 | Symbols: RIC10 | ROP-interactive CRIB motif-contai... 68 2e-12
AT4G21745.1 | Symbols: | PAK-box/P21-Rho-binding family protein... 65 2e-11
AT3G23380.1 | Symbols: RIC5 | ROP-interactive CRIB motif-contain... 64 3e-11
AT2G20430.1 | Symbols: RIC6 | ROP-interactive CRIB motif-contain... 64 4e-11
AT1G04450.1 | Symbols: RIC3 | ROP-interactive CRIB motif-contain... 61 3e-10
AT1G03982.1 | Symbols: | PAK-box/P21-Rho-binding family protein... 57 3e-09
AT1G61795.1 | Symbols: | PAK-box/P21-Rho-binding family protein... 56 7e-09
>AT2G33460.1 | Symbols: RIC1 | ROP-interactive CRIB
motif-containing protein 1 | chr2:14174590-14175561
REVERSE LENGTH=224
Length = 224
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 1 MVLAVVKEREMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFKT 43
+ KE+EM IG+PTDVKHVAHIG DGPT + PSWMN+FKT
Sbjct: 17 QIFDEEKEQEMQIGFPTDVKHVAHIGSDGPTNTTPSWMNDFKT 59
>AT4G28556.1 | Symbols: RIC7 | PAK-box/P21-Rho-binding family
protein | chr4:14114754-14115795 FORWARD LENGTH=216
Length = 216
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 34/41 (82%), Gaps = 2/41 (4%)
Query: 7 KEREMDIGYPTDVKHVAHIGWDGPT--GSGPSWMNEFKTAP 45
KE EM IG PTDVKHVAHIGWDGP+ + PSWMN+FK++P
Sbjct: 30 KEEEMQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDFKSSP 70
>AT4G04900.1 | Symbols: RIC10 | ROP-interactive CRIB
motif-containing protein 10 | chr4:2486218-2487779
REVERSE LENGTH=156
Length = 156
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Query: 2 VLAVVKER-EMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFKTAPDF 47
+ AV KER E++IG+PTDVKHVAHIGW+G +GS P WM+EFK +
Sbjct: 18 IFAVEKERDEIEIGFPTDVKHVAHIGWEGSSGSAPGWMSEFKVGAEL 64
>AT4G21745.1 | Symbols: | PAK-box/P21-Rho-binding family protein |
chr4:11549340-11550415 FORWARD LENGTH=156
Length = 156
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 20/107 (18%)
Query: 2 VLAVVKEREMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFKTAPDFSTSIGSLSERRDPN 61
++ V KER+++IG+PT+VKHVAHIGW G +GS P WM++FK +F + P
Sbjct: 15 IMFVGKERDLEIGHPTEVKHVAHIGW-GSSGSDPGWMSDFKAGAEFLS----------PR 63
Query: 62 ASTITSSRSVQDFGATSGS----QPKPNLYQGISS-----AGVSHVH 99
S+ + +R F TS S Q + N+ I G+S +H
Sbjct: 64 TSSFSHTRHSDSFFTTSDSTEFDQDQLNISDRIRDVPPIPVGLSKIH 110
>AT3G23380.1 | Symbols: RIC5 | ROP-interactive CRIB
motif-containing protein 5 | chr3:8373947-8374708
FORWARD LENGTH=193
Length = 193
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%)
Query: 2 VLAVVKEREMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFKTAPDFSTSIGSLSERR 58
+ KE EM IG PTDVKHVAHIGW+GP+ + PSWM++FK T S ++
Sbjct: 18 IFEDEKEPEMQIGIPTDVKHVAHIGWEGPSATTPSWMHDFKPTDQTKTETKGTSNKK 74
>AT2G20430.1 | Symbols: RIC6 | ROP-interactive CRIB
motif-containing protein 6 | chr2:8808667-8809781
REVERSE LENGTH=212
Length = 212
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 2 VLAVVKEREMDIGYPTDVKHVAHIGWDGPT--GSGPSWMNEFKTAPDFSTSIG 52
V KE E+ IG PTDVKHVAHIGWDGP+ + PSWM EF + F ++ G
Sbjct: 23 VFESEKEEEIQIGNPTDVKHVAHIGWDGPSANATAPSWMTEFNSGGGFESAEG 75
>AT1G04450.1 | Symbols: RIC3 | ROP-interactive CRIB
motif-containing protein 3 | chr1:1209006-1209853
FORWARD LENGTH=220
Length = 220
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 1 MVLAVVKEREMDIGYPTDVKHVAHIGWDGPTGSGPSWMNEFKTAPDFSTSIGSLSERRDP 60
+ K+++M IG+PTDVKHVAHIG DGP + PSWM +FK + + G + R D
Sbjct: 16 QIFDEEKDKDMQIGFPTDVKHVAHIGSDGPATNVPSWMGDFKPQENEN---GQVVSRADA 72
Query: 61 NASTITSSRSVQDF 74
N + I +Q+
Sbjct: 73 NNNQIGEGVGLQEL 86
>AT1G03982.1 | Symbols: | PAK-box/P21-Rho-binding family protein
| chr1:1022424-1023136 REVERSE LENGTH=177
Length = 177
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Query: 7 KEREMDIGYPTDVKHVAHIGWDGPT--GSGPSWMNEFKTAPDFSTS-IGSLSE 56
KE EM IG PTDVKHVAHIGWDG + + PSWM +FK +S + IG++ E
Sbjct: 11 KEAEMQIGTPTDVKHVAHIGWDGGSVNHNPPSWMKDFKVLGGYSPALIGNIKE 63
>AT1G61795.1 | Symbols: | PAK-box/P21-Rho-binding family protein
| chr1:22819943-22820826 FORWARD LENGTH=128
Length = 128
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 28/32 (87%)
Query: 13 IGYPTDVKHVAHIGWDGPTGSGPSWMNEFKTA 44
IGYPTDV+HV+HIGWD + S PSW++EFKT+
Sbjct: 30 IGYPTDVRHVSHIGWDSSSSSAPSWLHEFKTS 61