Miyakogusa Predicted Gene

Lj3g3v1531170.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1531170.2 Non Chatacterized Hit- tr|D7T0B0|D7T0B0_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,74.58,0,"Winged
helix" DNA-binding domain,NULL; DDRGK,DDRGK domain containing protein;
seg,NULL; coiled-coil,CUFF.42775.2
         (298 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G27120.2 | Symbols:  | CONTAINS InterPro DOMAIN/s: DDRGK doma...   243   9e-65
AT4G27120.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: DDRGK doma...   243   9e-65

>AT4G27120.2 | Symbols:  | CONTAINS InterPro DOMAIN/s: DDRGK domain
           (InterPro:IPR019153); Has 14775 Blast hits to 8764
           proteins in 778 species: Archae - 29; Bacteria - 1878;
           Metazoa - 5164; Fungi - 1447; Plants - 582; Viruses -
           164; Other Eukaryotes - 5511 (source: NCBI BLink). |
           chr4:13602210-13604227 REVERSE LENGTH=298
          Length = 298

 Score =  243 bits (621), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 125/179 (69%), Positives = 135/179 (75%), Gaps = 2/179 (1%)

Query: 122 NSKQDRYAEMRRLKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDKWKGEFSVDDEGTLE 181
           N+KQD YAEMRR KD                            FDKWKGEFSVD EGT E
Sbjct: 120 NTKQDWYAEMRRKKDEEREAEELKLEEEEKARQAKEEEAAALEFDKWKGEFSVDAEGTTE 179

Query: 182 DVQEKTEDLLSNFVEYIKKHKCVPLEDLAAEFKLRTQECINRITSLESMGRLSGVMDDRG 241
           +VQ   +DLLS FVEYIKK KCVPLEDLAAEF LRTQECINRI SLES+GRLSGVMDDRG
Sbjct: 180 EVQGGNQDLLSEFVEYIKKQKCVPLEDLAAEFHLRTQECINRIASLESIGRLSGVMDDRG 239

Query: 242 KFIYISQEEMKAVADYIKRQGRVSISHLASKSNQFIDLEPKVEY--TEDISNVEEITVS 298
           K+IYIS EEM AVADYIKRQGRVSISHLASKSNQFIDLEPKV++  TE+IS +EEI+VS
Sbjct: 240 KYIYISMEEMNAVADYIKRQGRVSISHLASKSNQFIDLEPKVQHQLTEEISGMEEISVS 298


>AT4G27120.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: DDRGK domain
           (InterPro:IPR019153); Has 30201 Blast hits to 17322
           proteins in 780 species: Archae - 12; Bacteria - 1396;
           Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
           0; Other Eukaryotes - 2996 (source: NCBI BLink). |
           chr4:13602210-13604227 REVERSE LENGTH=298
          Length = 298

 Score =  243 bits (621), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 125/179 (69%), Positives = 135/179 (75%), Gaps = 2/179 (1%)

Query: 122 NSKQDRYAEMRRLKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDKWKGEFSVDDEGTLE 181
           N+KQD YAEMRR KD                            FDKWKGEFSVD EGT E
Sbjct: 120 NTKQDWYAEMRRKKDEEREAEELKLEEEEKARQAKEEEAAALEFDKWKGEFSVDAEGTTE 179

Query: 182 DVQEKTEDLLSNFVEYIKKHKCVPLEDLAAEFKLRTQECINRITSLESMGRLSGVMDDRG 241
           +VQ   +DLLS FVEYIKK KCVPLEDLAAEF LRTQECINRI SLES+GRLSGVMDDRG
Sbjct: 180 EVQGGNQDLLSEFVEYIKKQKCVPLEDLAAEFHLRTQECINRIASLESIGRLSGVMDDRG 239

Query: 242 KFIYISQEEMKAVADYIKRQGRVSISHLASKSNQFIDLEPKVEY--TEDISNVEEITVS 298
           K+IYIS EEM AVADYIKRQGRVSISHLASKSNQFIDLEPKV++  TE+IS +EEI+VS
Sbjct: 240 KYIYISMEEMNAVADYIKRQGRVSISHLASKSNQFIDLEPKVQHQLTEEISGMEEISVS 298